pycom13g24820

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0000158
Physical Location & Seq
Forward (+)
21834724 .. 21838674
3951 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g24820.21

Sequence Viewer

Length: 2646 bp
ATGAAAGTCAATACATTAAATTTTATTAAATTAACACACAATCATATAATATATTGTTATGATAGGTCCCATACCATGGCAAAAGGAAAAGATAAACCAAACATGGGTTGTGTTGGTGCATGCTTTTGCTTCAAATATAATGATGGTGATTTGGCAAAGTTTTCAAACTCGTGTCTAGATAGTTACATATACGACAATTCTTTATTTTTTGAGCAGAAAAGTTCAATCTTGCTTGAACTCCTGGATTGTGATTTTTTATCACTGATTAGATTAGATATGTGCCACATCAATTCAAATGGAGATAAGCATGAAATCTGTAGGTCTCACAACCGTCCAATAAAATCTAACAGACAATTTGGTCAGGTTAGTTTTGTTCCAAAATGTCTTATACATAAGGGAATTTATTTACACGGAATTTTAATAAAAAAAAAATTGATGCATGAAATATTAAAAATCAATAAACCTGAGATTTATTGCAAGTTGTTTTATTTGCTTGAGCTTTGCTTAATTAAATGTATCGACGTAGCACTGTTCTTTTTTGGGGACAGATGGCCGGATCTGTTGTTGAATTCCTGTATCACTGTGAAATGTAAGGTACTGAAAGCAATTAATACCCACTACAATATCCTTTACCAAACAAAAACAATCAATTTACCAAAAAAAACAAAAACAATTAAACCCTTTTCTCTGTCTATGAGAACTATTACTGTACGTTTTATTTGGGTTTTTTGGGGCGTTTTACCAGAAATGTTAAATCTCGAAGCTTGGTTTTTTCTGACCGTTTTGTGCGTGTTAGAGAGTAAGGTTACCTTTGTAGTTCGATCGATCAAATCGTATGCTAGGGAGACTAATTTAAACGTGTTTATCTCTATTAATGACACATTATTTAATTTTATAAATTTAATCTACAAATTTAGTCTCATTAACATTACTTTTAAAAAAATTTCAAAGTCCTTGATAAGAGAATGTTCAAAGCCACTCACAACCACACAATTTCGATTCTTCCTTTGTCAAACTGTTTACCCGCGTTGTATCACAAAATATCTCTTATTTAAACGTTTATTTTCTAGAAATAAGATAAATGTTTTAAACAACTATTCTTTAGTGATCTCATACTTGGTTGACACATCCCGACCTAAATCGAGGCATACTGGTCATCACATGAGGGTAACGTGGGTAAATAAAAACCAAACTAGCTACTTTACACTAGGTAAGTATATAAGTACGAGTGAAGTATTAATTATACAAGACATGATGGAAATTCCTACATTATTTGAAGTCTGTCAGAACCGCCGTAGAATGCTCGTAAGCCACCAACACAAACTTCTACCTAGAACCTGGAGAGGCGCAAAACAGAAAAATTTCCCAGAAATAGTATTACATACGTATATAGAAATCATTCACGAAAGCAATGGAAACCAAGTATATGCCATGTCACTATCTCAGCAATGCCAGCTAGAATCACTTAATGTGACCTGTATGGTGACATGTACGACACTAAATCTACACACGAGTCAGAACCACCTAATGTGGTCTGTACGACATGCTGGATTACAAGTCACCTATGTGTCGGAACCACCTAATGTGGTATGTACGACAGGCTGGCACCTGACTTGGATCCAAGCTGAACGCGCGGTGCGGGAGAGCACTAACACCAGGGTGCAGGACAATGACCTCTACGTGCATCAACTCATAATCAACTACCATGCAACTGTACCATCATTATGTACACCTAAACTTACCTGGGCTTCTGCAACATCATGCAATATTATGCAAAGCTATACTAATGCATATGCTAAAATTTTTTGGGAACGCATATATATATATATATATATAAATATATATAAACAAAAAGCCCAATCACTGGTATGTAGCAGGGTCGTAACCACCGAGTCTCGTGAAACAACTATTTTGAACGTTAATTTAAAGCACATAACCAAAACCATATGCCATCGTGTTTCCAACGCCCCACACGCCCTTACACGCCAGCCACGCACTGACGGAATGTTCCCTAAATGTATATTCCCATCTCTACCTAGCACGAGCCCTTTTGGGACGAGTTCGGGCAAGAGCATTCCCAGGATGGGTAACCCACTGGGAAATTCTCATATGAGTTCCCAGAAACAAAACCGTGAGGGCGTGGTCGGGGCCCAAAGCAGACAATATCGTGCTACAGTAGAGTCAAGCTCGGGATATGGTGGGGGCCAGGGTTGGGATGTGACAATTTGGTATCAGACCCAATTCCTGGTCGGAAATGTACCAACGAGGACGGGTGAGGATCCTGTAAGCCTTATATGTATATTTCCATTTCTACCTAGCACGAGGCCTTTTGGGACGAGTTCGGGCGAGAGTATTCCCAAGATGGGTGACCCACTGGAAAGTTCTCGTGTGAGTTCCCAGAAACAAAACCTTGAAGGCGTGGTCAGGGCCCAAAGCGGACAATATCGTGCTACGGTGGAGTCGAGCCCGGGATGTGGTGGAGGTCCGGGATGGGATGTGACATGGTTGTTCAAGTATATTATATTTAAAAAGAATGATAATCTGTCATTAATAAAAAATAATTGCGTTAATGTACACTTAAGTAATAATTTAACCATCAATAACCACATCATATTATTTCTGAAATGTAATTTAATATTACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

882

Amino Acids

101.14

Weight (kDa)

9.47

Isoelectric Point (pI)

41.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 896
AasI GACNNNNNNGTC 1 cut(s) 357
AccB1I GGYRCC 1 cut(s) 1605
AccB7I CCANNNNNTGG 3 cut(s) 76, 1864, 2245
AccII CGCG 3 cut(s) 1027, 1632, 1634
AciI CCGC 5 cut(s) 1025, 1291, 1634, 1639, 2436
AclI AACGTT 2 cut(s) 1057, 1917
AclWI GGATC 5 cut(s) 564, 1612, 1625, 2273, 2286
AcoI YGGCCR 1 cut(s) 551
AfiI CCNNNNNNNGG 8 cut(s) 76, 104, 1864, 2084, 2212, 2245, 2363, 2474
AflII CTTAAG 1 cut(s) 2578
AflIII ACRYGT 2 cut(s) 858, 1487
AjnI CCWGG 7 cut(s) 240, 1337, 1655, 1742, 2078, 2205, 2244
AjuI GAANNNNNNNTTGG 2 cut(s) 1308, 1340
AleI CACNNNNGTG 2 cut(s) 1565, 1658
AluBI AGCT 7 cut(s) 499, 764, 1197, 1456, 1625, 1779, 2187
AluI AGCT 7 cut(s) 499, 764, 1197, 1456, 1625, 1779, 2187
Alw21I GWGCWC 1 cut(s) 1649
Alw26I GTCTC 4 cut(s) 327, 839, 923, 1899
AlwI GGATC 5 cut(s) 564, 1612, 1625, 2273, 2286
Ama87I CYCGRG 2 cut(s) 2188, 2467
AoxI GGCC 5 cut(s) 551, 2148, 2203, 2324, 2427
ApaI GGGCCC 2 cut(s) 2152, 2431
AseI ATTAAT 4 cut(s) 609, 873, 1238, 2549
Asp700I GAANNNNTTC 2 cut(s) 1361, 1398
AspLEI GCGC 2 cut(s) 1349, 1634
AspS9I GGNCC 7 cut(s) 66, 2148, 2149, 2203, 2427, 2428, 2483
AsuC2I CCSGG 3 cut(s) 2468, 2469, 2487
AsuHPI GGTGA 5 cut(s) 158, 1495, 1552, 2285, 2378
AvaI CYCGRG 2 cut(s) 2188, 2467
AvaII GGWCC 2 cut(s) 66, 2483
BaeGI GKGCMC 2 cut(s) 2152, 2431
BamHI GGATCC 2 cut(s) 1617, 2278
BanI GGYRCC 1 cut(s) 1605
BanII GRGCYC 4 cut(s) 2048, 2152, 2431, 2468
BauI CACGAG 6 cut(s) 169, 1510, 1896, 2041, 2320, 2385
Bbv12I GWGCWC 1 cut(s) 1649
BceAI ACGGC 1 cut(s) 1278
BciT130I CCWGG 7 cut(s) 242, 1339, 1657, 1744, 2080, 2207, 2246
BcnI CCSGG 3 cut(s) 2468, 2469, 2487
BcoDI GTCTC 4 cut(s) 327, 839, 923, 1899
BfaI CTAG 9 cut(s) 176, 840, 1068, 1194, 1208, 1332, 1457, 2037, 2316
BfmI CTRYAG 2 cut(s) 316, 2172
BfrI CTTAAG 1 cut(s) 2578
Bme18I GGWCC 2 cut(s) 66, 2483
BmeT110I CYCGRG 2 cut(s) 2188, 2467
BmgT120I GGNCC 7 cut(s) 66, 2148, 2149, 2203, 2427, 2428, 2483
BmiI GGNNCC 9 cut(s) 68, 1575, 1607, 1619, 2149, 2150, 2204, 2280, 2429
BmrI ACTGGG 1 cut(s) 2105
BmsI GCATC 2 cut(s) 426, 1693
BmuI ACTGGG 1 cut(s) 2105
BplI GAGNNNNNCTC 2 cut(s) 2171, 2203
BpmI CTGGAG 1 cut(s) 1360
BpuEI CTTGAG 1 cut(s) 515
BpuMI CCSGG 3 cut(s) 2468, 2469, 2487
Bsa29I ATCGAT 1 cut(s) 824
BsaAI YACGTR 2 cut(s) 1386, 1681
BsaI GGTCTC 1 cut(s) 327
BsaJI CCNNGG 6 cut(s) 75, 1656, 1743, 2078, 2206, 2467
Bsc4I CCNNNNNNNGG 8 cut(s) 76, 104, 1864, 2084, 2212, 2245, 2363, 2474
Bse1I ACTGG 4 cut(s) 1156, 1869, 2100, 2379
Bse3DI GCAATG 2 cut(s) 1417, 1454
BseBI CCWGG 7 cut(s) 242, 1339, 1657, 1744, 2080, 2207, 2246
BseCI ATCGAT 1 cut(s) 824
BseDI CCNNGG 6 cut(s) 75, 1656, 1743, 2078, 2206, 2467
BseGI GGATG 6 cut(s) 1127, 2088, 2221, 2477, 2495, 2500
BseLI CCNNNNNNNGG 8 cut(s) 76, 104, 1864, 2084, 2212, 2245, 2363, 2474
BseMI GCAATG 2 cut(s) 1417, 1454
BseMII CTCAG 2 cut(s) 456, 1457
BseNI ACTGG 4 cut(s) 1156, 1869, 2100, 2379
BseSI GKGCMC 2 cut(s) 2152, 2431
BsgI GTGCAG 1 cut(s) 1682
Bsh1236I CGCG 3 cut(s) 1027, 1632, 1634
Bsh1285I CGRYCG 1 cut(s) 824
BshFI GGCC 5 cut(s) 553, 2150, 2205, 2326, 2429
BshNI GGYRCC 1 cut(s) 1605
BshVI ATCGAT 1 cut(s) 824
BsiEI CGRYCG 1 cut(s) 824
BsiHKAI GWGCWC 1 cut(s) 1649
BsiHKCI CYCGRG 2 cut(s) 2188, 2467
BsiSI CCGG 3 cut(s) 554, 2468, 2486
BslFI GGGAC 4 cut(s) 52, 557, 2068, 2347
BslI CCNNNNNNNGG 8 cut(s) 76, 104, 1864, 2084, 2212, 2245, 2363, 2474
BsmAI GTCTC 4 cut(s) 327, 839, 923, 1899
BsmFI GGGAC 4 cut(s) 52, 557, 2068, 2347
BsmI GAATGC 2 cut(s) 1305, 2073
BsnI GGCC 5 cut(s) 553, 2150, 2205, 2326, 2429
Bso31I GGTCTC 1 cut(s) 327
BsoBI CYCGRG 2 cut(s) 2188, 2467
Bsp120I GGGCCC 2 cut(s) 2148, 2427
Bsp1286I GDGCHC 5 cut(s) 1649, 2048, 2152, 2431, 2468
Bsp1407I TGTACA 2 cut(s) 1727, 2572
Bsp143I GATC 6 cut(s) 556, 821, 825, 1107, 1617, 2278
Bsp19I CCATGG 1 cut(s) 75
BspACI CCGC 5 cut(s) 1025, 1291, 1634, 1639, 2436
BspANI GGCC 5 cut(s) 553, 2150, 2205, 2326, 2429
BspCNI CTCAG 2 cut(s) 457, 1456
BspDI ATCGAT 1 cut(s) 824
BspFNI CGCG 3 cut(s) 1027, 1632, 1634
BspLI GGNNCC 9 cut(s) 68, 1575, 1607, 1619, 2149, 2150, 2204, 2280, 2429
BspPI GGATC 5 cut(s) 564, 1612, 1625, 2273, 2286
BspT107I GGYRCC 1 cut(s) 1605
BspTI CTTAAG 1 cut(s) 2578
BspTNI GGTCTC 1 cut(s) 327
BsrDI GCAATG 2 cut(s) 1417, 1454
BsrGI TGTACA 2 cut(s) 1727, 2572
BsrI ACTGG 4 cut(s) 1156, 1869, 2100, 2379
BssECI CCNNGG 6 cut(s) 75, 1656, 1743, 2078, 2206, 2467
BssMI GATC 6 cut(s) 556, 821, 825, 1107, 1617, 2278
BssSI CACGAG 6 cut(s) 169, 1510, 1896, 2041, 2320, 2385
BssT1I CCWWGG 1 cut(s) 75
Bst2BI CACGAG 6 cut(s) 169, 1510, 1896, 2041, 2320, 2385
Bst2UI CCWGG 7 cut(s) 242, 1339, 1657, 1744, 2080, 2207, 2246
BstAFI CTTAAG 1 cut(s) 2578
BstAUI TGTACA 2 cut(s) 1727, 2572
BstBAI YACGTR 2 cut(s) 1386, 1681
BstC8I GCNNGC 4 cut(s) 121, 1454, 1604, 1988
BstDEI CTNAG 2 cut(s) 465, 1443
BstDSI CCRYGG 1 cut(s) 75
BstEII GGTNACC 3 cut(s) 805, 2087, 2366
BstF5I GGATG 6 cut(s) 1127, 2088, 2221, 2477, 2495, 2500
BstFNI CGCG 3 cut(s) 1027, 1632, 1634
BstHHI GCGC 2 cut(s) 1349, 1634
BstKTI GATC 6 cut(s) 559, 824, 828, 1110, 1620, 2281
BstMAI GTCTC 4 cut(s) 327, 839, 923, 1899
BstMBI GATC 6 cut(s) 556, 821, 825, 1107, 1617, 2278
BstMCI CGRYCG 1 cut(s) 824
BstMWI GCNNNNNNNGC 4 cut(s) 1453, 1631, 1973, 1992
BstNI CCWGG 7 cut(s) 242, 1339, 1657, 1744, 2080, 2207, 2246
BstNSI RCATGY 3 cut(s) 123, 1491, 1547
BstPI GGTNACC 3 cut(s) 805, 2087, 2366
BstSFI CTRYAG 2 cut(s) 316, 2172
BstSLI GKGCMC 2 cut(s) 2152, 2431
BstSNI TACGTA 1 cut(s) 1386
BstUI CGCG 3 cut(s) 1027, 1632, 1634
BstX2I RGATCY 3 cut(s) 556, 1617, 2278
BstYI RGATCY 3 cut(s) 556, 1617, 2278
Bsu15I ATCGAT 1 cut(s) 824
BsuRI GGCC 5 cut(s) 553, 2150, 2205, 2326, 2429
BsuTUI ATCGAT 1 cut(s) 824
BtgI CCRYGG 1 cut(s) 75
BtsCI GGATG 6 cut(s) 1127, 2088, 2221, 2477, 2495, 2500
BtsIMutI CAGTG 7 cut(s) 260, 527, 579, 1862, 1995, 2093, 2372
Cac8I GCNNGC 4 cut(s) 121, 1454, 1604, 1988
CfoI GCGC 2 cut(s) 1349, 1634
Cfr13I GGNCC 7 cut(s) 66, 2148, 2149, 2203, 2427, 2428, 2483
Cfr9I CCCGGG 1 cut(s) 2467
ClaI ATCGAT 1 cut(s) 824
DdeI CTNAG 2 cut(s) 465, 1443
DpnI GATC 6 cut(s) 558, 823, 827, 1109, 1619, 2280
DpnII GATC 6 cut(s) 556, 821, 825, 1107, 1617, 2278
DraI TTTAAA 6 cut(s) 855, 937, 1054, 1089, 1926, 2527
DrdI GACNNNNNNGTC 1 cut(s) 357
DseDI GACNNNNNNGTC 1 cut(s) 357
EaeI YGGCCR 1 cut(s) 551
Eco105I TACGTA 1 cut(s) 1386
Eco130I CCWWGG 1 cut(s) 75
Eco147I AGGCCT 1 cut(s) 2326
Eco24I GRGCYC 4 cut(s) 2048, 2152, 2431, 2468
Eco31I GGTCTC 1 cut(s) 327
Eco47I GGWCC 2 cut(s) 66, 2483
Eco88I CYCGRG 2 cut(s) 2188, 2467
Eco91I GGTNACC 3 cut(s) 805, 2087, 2366
EcoO109I RGGNCCY 3 cut(s) 66, 2148, 2427
EcoO65I GGTNACC 3 cut(s) 805, 2087, 2366
EcoRI GAATTC 1 cut(s) 568
EcoRII CCWGG 7 cut(s) 240, 1337, 1655, 1742, 2078, 2205, 2244
EcoT14I CCWWGG 1 cut(s) 75
EcoT22I ATGCAT 2 cut(s) 441, 1792
EcoT38I GRGCYC 4 cut(s) 2048, 2152, 2431, 2468
ErhI CCWWGG 1 cut(s) 75
FalI AAGNNNNNCTT 2 cut(s) 794, 826
FaqI GGGAC 4 cut(s) 52, 557, 2068, 2347
FauI CCCGC 2 cut(s) 1032, 1632
FauNDI CATATG 3 cut(s) 1792, 1946, 2109
FokI GGATG 6 cut(s) 1114, 2095, 2228, 2484, 2502, 2507
FriOI GRGCYC 4 cut(s) 2048, 2152, 2431, 2468
FspBI CTAG 9 cut(s) 176, 840, 1068, 1194, 1208, 1332, 1457, 2037, 2316
GlaI GCGC 2 cut(s) 1348, 1633
GsuI CTGGAG 1 cut(s) 1360
HaeIII GGCC 5 cut(s) 553, 2150, 2205, 2326, 2429
HapII CCGG 3 cut(s) 554, 2468, 2486
HhaI GCGC 2 cut(s) 1349, 1634
Hin6I GCGC 2 cut(s) 1347, 1632
HinP1I GCGC 2 cut(s) 1347, 1632
HincII GTYRAC 1 cut(s) 1123
HindII GTYRAC 1 cut(s) 1123
HindIII AAGCTT 1 cut(s) 762
HinfI GANTC 6 cut(s) 999, 1460, 1513, 1892, 2180, 2459
HpaII CCGG 3 cut(s) 554, 2468, 2486
HphI GGTGA 5 cut(s) 158, 1495, 1552, 2285, 2378
Hpy166II GTNNAC 4 cut(s) 1021, 1123, 1730, 2575
Hpy188I TCNGA 7 cut(s) 777, 1287, 1518, 1573, 2235, 2252, 2622
Hpy188III TCNNGA 7 cut(s) 176, 758, 1068, 1131, 1403, 1898, 2190
Hpy8I GTNNAC 4 cut(s) 1021, 1123, 1730, 2575
Hpy99I CGWCG 1 cut(s) 524
HpyAV CCTTC 1 cut(s) 2408
HpyCH4IV ACGT 8 cut(s) 522, 712, 858, 1057, 1172, 1385, 1680, 1917
HpyF10VI GCNNNNNNNGC 4 cut(s) 1453, 1631, 1973, 1992
HpyF3I CTNAG 2 cut(s) 465, 1443
HpySE526I ACGT 8 cut(s) 522, 712, 858, 1057, 1172, 1385, 1680, 1917
HspAI GCGC 2 cut(s) 1347, 1632
Kzo9I GATC 6 cut(s) 556, 821, 825, 1107, 1617, 2278
LweI GCATC 2 cut(s) 426, 1693
MaeI CTAG 9 cut(s) 176, 840, 1068, 1194, 1208, 1332, 1457, 2037, 2316
MaeII ACGT 8 cut(s) 522, 712, 858, 1057, 1172, 1385, 1680, 1917
MalI GATC 6 cut(s) 558, 823, 827, 1109, 1619, 2280
MboI GATC 6 cut(s) 556, 821, 825, 1107, 1617, 2278
MboII GAAGA 1 cut(s) 994
MflI RGATCY 3 cut(s) 556, 1617, 2278
MhlI GDGCHC 5 cut(s) 1649, 2048, 2152, 2431, 2468
MlyI GAGTC 4 cut(s) 1522, 1901, 2189, 2468
MmeI TCCRAC 3 cut(s) 1551, 1986, 2230
MnlI CCTC 9 cut(s) 1137, 1158, 1337, 1685, 2128, 2259, 2269, 2316, 2474
Mph1103I ATGCAT 2 cut(s) 441, 1792
MroXI GAANNNNTTC 2 cut(s) 1361, 1398
MslI CAYNNNNRTG 4 cut(s) 1565, 1658, 1723, 1867
MspCI CTTAAG 1 cut(s) 2578
MspI CCGG 3 cut(s) 554, 2468, 2486
Mva1269I GAATGC 2 cut(s) 1305, 2073
MvaI CCWGG 7 cut(s) 242, 1339, 1657, 1744, 2080, 2207, 2246
MvnI CGCG 3 cut(s) 1027, 1632, 1634
MwoI GCNNNNNNNGC 4 cut(s) 1453, 1631, 1973, 1992
NciI CCSGG 3 cut(s) 2468, 2469, 2487
NcoI CCATGG 1 cut(s) 75
NdeI CATATG 3 cut(s) 1792, 1946, 2109
NdeII GATC 6 cut(s) 556, 821, 825, 1107, 1617, 2278
NlaIV GGNNCC 9 cut(s) 68, 1575, 1607, 1619, 2149, 2150, 2204, 2280, 2429
NmuCI GTSAC 7 cut(s) 1434, 1471, 1483, 1558, 2218, 2366, 2497
NsiI ATGCAT 2 cut(s) 441, 1792
NspI RCATGY 3 cut(s) 123, 1491, 1547
OliI CACNNNNGTG 2 cut(s) 1565, 1658
PacI TTAATTAA 1 cut(s) 510
PaeI GCATGC 1 cut(s) 123
PceI AGGCCT 1 cut(s) 2326
PciI ACATGT 1 cut(s) 1487
PcsI WCGNNNNNNNCGW 3 cut(s) 830, 1887, 2459
PctI GAATGC 2 cut(s) 1305, 2073
PdmI GAANNNNTTC 2 cut(s) 1361, 1398
PfeI GAWTC 2 cut(s) 999, 1460
PflMI CCANNNNNTGG 3 cut(s) 76, 1864, 2245
PfoI TCCNGGA 2 cut(s) 240, 2485
Ple19I CGATCG 1 cut(s) 824
PleI GAGTC 4 cut(s) 1521, 1900, 2188, 2467
PpsI GAGTC 4 cut(s) 1521, 1900, 2188, 2467
Ppu21I YACGTR 2 cut(s) 1386, 1681
PpuMI RGGWCCY 1 cut(s) 66
PscI ACATGT 1 cut(s) 1487
PshBI ATTAAT 4 cut(s) 609, 873, 1238, 2549
PsiI TTATAA 1 cut(s) 896
Psp1406I AACGTT 2 cut(s) 1057, 1917
Psp5II RGGWCCY 1 cut(s) 66
Psp6I CCWGG 7 cut(s) 240, 1337, 1655, 1742, 2078, 2205, 2244
PspEI GGTNACC 3 cut(s) 805, 2087, 2366
PspGI CCWGG 7 cut(s) 240, 1337, 1655, 1742, 2078, 2205, 2244
PspN4I GGNNCC 9 cut(s) 68, 1575, 1607, 1619, 2149, 2150, 2204, 2280, 2429
PspOMI GGGCCC 2 cut(s) 2148, 2427
PspPI GGNCC 7 cut(s) 66, 2148, 2149, 2203, 2427, 2428, 2483
PspPPI RGGWCCY 1 cut(s) 66
PsuI RGATCY 3 cut(s) 556, 1617, 2278
PvuI CGATCG 1 cut(s) 824
RseI CAYNNNNRTG 4 cut(s) 1565, 1658, 1723, 1867
Sau3AI GATC 6 cut(s) 556, 821, 825, 1107, 1617, 2278
Sau96I GGNCC 7 cut(s) 66, 2148, 2149, 2203, 2427, 2428, 2483
SchI GAGTC 4 cut(s) 1522, 1901, 2189, 2468
SduI GDGCHC 5 cut(s) 1649, 2048, 2152, 2431, 2468
SfaNI GCATC 2 cut(s) 426, 1693
SfcI CTRYAG 2 cut(s) 316, 2172
SinI GGWCC 2 cut(s) 66, 2483
SmaI CCCGGG 1 cut(s) 2469
SmiMI CAYNNNNRTG 4 cut(s) 1565, 1658, 1723, 1867
SmlI CTYRAG 2 cut(s) 494, 2578
SmoI CTYRAG 2 cut(s) 494, 2578
SnaBI TACGTA 1 cut(s) 1386
SphI GCATGC 1 cut(s) 123
SseBI AGGCCT 1 cut(s) 2326
SsiI CCGC 5 cut(s) 1025, 1291, 1634, 1639, 2436
SspI AATATT 3 cut(s) 447, 1768, 2637
SspMI CTAG 9 cut(s) 176, 840, 1068, 1194, 1208, 1332, 1457, 2037, 2316
StuI AGGCCT 1 cut(s) 2326
StyI CCWWGG 1 cut(s) 75
TaiI ACGT 8 cut(s) 525, 715, 861, 1060, 1175, 1388, 1683, 1920
TaqI TCGA 7 cut(s) 519, 759, 820, 824, 997, 1142, 2462
TatI WGTACW 2 cut(s) 1727, 2572
TfiI GAWTC 2 cut(s) 999, 1460
TscAI CASTG 7 cut(s) 267, 534, 586, 1869, 2002, 2100, 2379
TseFI GTSAC 7 cut(s) 1434, 1471, 1483, 1558, 2218, 2366, 2497
Tsp45I GTSAC 7 cut(s) 1434, 1471, 1483, 1558, 2218, 2366, 2497
TspDTI ATGAA 3 cut(s) 17, 324, 456
TspGWI ACGGA 2 cut(s) 426, 2016
TspMI CCCGGG 1 cut(s) 2467
TspRI CASTG 7 cut(s) 267, 534, 586, 1869, 2002, 2100, 2379
Van91I CCANNNNNTGG 3 cut(s) 76, 1864, 2245
Vha464I CTTAAG 1 cut(s) 2578
VpaK11BI GGWCC 2 cut(s) 66, 2483
VspI ATTAAT 4 cut(s) 609, 873, 1238, 2549
XbaI TCTAGA 2 cut(s) 175, 1067
XceI RCATGY 3 cut(s) 123, 1491, 1547
XmaI CCCGGG 1 cut(s) 2467
XmnI GAANNNNTTC 2 cut(s) 1361, 1398
XspI CTAG 9 cut(s) 176, 840, 1068, 1194, 1208, 1332, 1457, 2037, 2316
Zsp2I ATGCAT 2 cut(s) 441, 1792
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.