pycom02g08490
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0000158
Physical Location & Seq
Forward (+)
5907639 .. 5908655
1017 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g08490.3

Sequence Viewer

Length: 798 bp
ATGACTACTATTTCTTCACACCTTTATGCTAAATTCAAATATATATGCATCAAGAAGATCAGGCGGCTGAAGAAGTTGGCTGCATATTGGAAAGAACAAGCAGGCAAGAAAGGAAACGATGAAGATTTGGAAGAAATTCAGGATGAGCGACCGGTGAAAGATAGAGGAGATGGCCTTGGTAAAAAAGGTTGTAACTTGGGAGAGGAAGTGATGTGCCTTATATGTACATGCTCACCTCCTTACAGTGAGACGCGTTTTGGGTGGAAGCCCAATAACAAATCCGTGAGGACGTGGCCCAAAACGAACAATATCTTACTATGTGGATTGGGATGTGACAATTTGGTATCAGAACCACTTCCCGGCCGAAAGTGTGCTGACGAGGACGTCGTGCCCCTAAGGGCACCGATTGTTAGATTCCACGCCGCCCGGGGAGAAATTTTGTTCCTAGTTTTGTACGTGCATAAACGGTTGGACGCAAAAATTTCTCTGCACATGGATTACGTGCTAATATTTTACGTCGGGCCCCTAAGGGCACCGATTGTCAGATTCCACGCCGCCCGGGGAGAAATTTTGTTCCTAGTTTTGTACGTGCATAAACGGTTGGACGCAAAAATTTCTCTGCACATTGATTACGTATTCCACGTTGCCCTGGGGAGAAATTTTTTCCTAGTTTTGTACGTGCATAAACGGTTTGCTGCAAAAATTTCTCCGCACATGGATGACGTGCTAATATTTTTGTTCTTGCATTCAACCCCAAATAATTATGGTACACTCATTCAACCCCAAATGCTCTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000226 GO:0000902 GO:0000904 GO:0001578 GO:0003002 GO:0003674 GO:0003774 GO:0003777 GO:0003779 GO:0003824 GO:0005488 GO:0005509 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005881 GO:0005938 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007154 GO:0007267 GO:0007275 GO:0007389 GO:0008017 GO:0008092 GO:0008150 GO:0008569 GO:0009524 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0015630 GO:0015631 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0030154 GO:0030554 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032991 GO:0036094 GO:0042623 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043531 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0044877 GO:0045165 GO:0045168 GO:0046872 GO:0046983 GO:0048468 GO:0048629 GO:0048856 GO:0048869 GO:0051015 GO:0055028 GO:0071840 GO:0071944 GO:0072686 GO:0090558 GO:0090626 GO:0097159 GO:0097367 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:1901265 GO:1901363 GO:1990939
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FERM_M FERM_N Kinesin MyTH4

Protein Analysis

266

Amino Acids

30.39

Weight (kDa)

9.38

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 383
AatII GACGTC 1 cut(s) 387
AccB1I GGYRCC 2 cut(s) 400, 532
AccII CGCG 1 cut(s) 253
AciI CCGC 4 cut(s) 64, 423, 555, 710
AcoI YGGCCR 1 cut(s) 361
AcsI RAATTY 8 cut(s) 32, 135, 435, 480, 567, 612, 658, 702
AcuI CTGAAG 1 cut(s) 89
AcyI GRCGYC 1 cut(s) 384
AfaI GTAC 5 cut(s) 226, 455, 587, 677, 769
AfiI CCNNNNNNNGG 1 cut(s) 359
AflIII ACRYGT 1 cut(s) 251
AgeI ACCGGT 1 cut(s) 151
AgsI TTSAA 3 cut(s) 37, 750, 779
AjiI CACGTC 2 cut(s) 291, 724
AjnI CCWGG 1 cut(s) 648
Alw26I GTCTC 1 cut(s) 242
Ama87I CYCGRG 2 cut(s) 426, 558
AoxI GGCC 4 cut(s) 172, 293, 361, 521
ApaI GGGCCC 1 cut(s) 525
ApeKI GCWGC 2 cut(s) 80, 695
ApoI RAATTY 8 cut(s) 32, 135, 435, 480, 567, 612, 658, 702
AsiGI ACCGGT 1 cut(s) 151
Asp700I GAANNNNTTC 2 cut(s) 135, 354
AspS9I GGNCC 3 cut(s) 294, 521, 522
AsuC2I CCSGG 5 cut(s) 360, 427, 428, 559, 560
AsuHPI GGTGA 2 cut(s) 166, 225
AvaI CYCGRG 2 cut(s) 426, 558
AxyI CCTNAGG 2 cut(s) 395, 527
BaeGI GKGCMC 4 cut(s) 393, 403, 525, 535
BanI GGYRCC 2 cut(s) 400, 532
BanII GRGCYC 1 cut(s) 525
BbvI GCAGC 2 cut(s) 67, 682
BccI CCATC 1 cut(s) 164
BciT130I CCWGG 1 cut(s) 650
BcnI CCSGG 5 cut(s) 360, 427, 428, 559, 560
BcoDI GTCTC 1 cut(s) 242
BfaI CTAG 3 cut(s) 446, 578, 668
BisI GCNGC 5 cut(s) 65, 81, 423, 555, 696
BlsI GCNGC 5 cut(s) 66, 82, 424, 556, 697
Bme1390I CCNGG 6 cut(s) 360, 427, 428, 559, 560, 650
BmeT110I CYCGRG 2 cut(s) 426, 558
BmgBI CACGTC 2 cut(s) 291, 724
BmgT120I GGNCC 3 cut(s) 294, 521, 522
BmiI GGNNCC 4 cut(s) 402, 523, 524, 534
BmrFI CCNGG 6 cut(s) 360, 427, 428, 559, 560, 650
BmsI GCATC 1 cut(s) 57
BpuMI CCSGG 5 cut(s) 360, 427, 428, 559, 560
BsaAI YACGTR 5 cut(s) 457, 502, 589, 634, 679
BsaHI GRCGYC 1 cut(s) 384
BsaJI CCNNGG 7 cut(s) 175, 426, 427, 558, 559, 648, 649
BsaWI WCCGGW 1 cut(s) 151
BsaXI ACNNNNNCTCC 2 cut(s) 192, 222
Bsc4I CCNNNNNNNGG 1 cut(s) 359
Bse118I RCCGGY 1 cut(s) 151
Bse21I CCTNAGG 2 cut(s) 395, 527
BseBI CCWGG 1 cut(s) 650
BseDI CCNNGG 7 cut(s) 175, 426, 427, 558, 559, 648, 649
BseGI GGATG 3 cut(s) 148, 335, 724
BseLI CCNNNNNNNGG 1 cut(s) 359
BseRI GAGGAG 1 cut(s) 180
BseSI GKGCMC 4 cut(s) 393, 403, 525, 535
BseX3I CGGCCG 1 cut(s) 361
BseXI GCAGC 2 cut(s) 67, 682
BsgI GTGCAG 2 cut(s) 473, 605
Bsh1236I CGCG 1 cut(s) 253
Bsh1285I CGRYCG 2 cut(s) 152, 364
BshFI GGCC 4 cut(s) 174, 295, 363, 523
BshNI GGYRCC 2 cut(s) 400, 532
BshTI ACCGGT 1 cut(s) 151
BsiEI CGRYCG 2 cut(s) 152, 364
BsiHKCI CYCGRG 2 cut(s) 426, 558
BsiSI CCGG 4 cut(s) 152, 360, 427, 559
BslI CCNNNNNNNGG 1 cut(s) 359
BsmAI GTCTC 1 cut(s) 242
BsmBI CGTCTC 1 cut(s) 242
BsmI GAATGC 1 cut(s) 745
BsnI GGCC 4 cut(s) 174, 295, 363, 523
BsoBI CYCGRG 2 cut(s) 426, 558
Bsp120I GGGCCC 1 cut(s) 521
Bsp1286I GDGCHC 4 cut(s) 393, 403, 525, 535
Bsp1407I TGTACA 1 cut(s) 224
Bsp143I GATC 1 cut(s) 57
BspACI CCGC 4 cut(s) 64, 423, 555, 710
BspANI GGCC 4 cut(s) 174, 295, 363, 523
BspFNI CGCG 1 cut(s) 253
BspLI GGNNCC 4 cut(s) 402, 523, 524, 534
BspT107I GGYRCC 2 cut(s) 400, 532
BsrFI RCCGGY 1 cut(s) 151
BsrGI TGTACA 1 cut(s) 224
BssAI RCCGGY 1 cut(s) 151
BssECI CCNNGG 7 cut(s) 175, 426, 427, 558, 559, 648, 649
BssMI GATC 1 cut(s) 57
BssNI GRCGYC 1 cut(s) 384
BssT1I CCWWGG 1 cut(s) 175
Bst2UI CCWGG 1 cut(s) 650
Bst4CI ACNGT 4 cut(s) 245, 468, 600, 690
BstACI GRCGYC 1 cut(s) 384
BstAUI TGTACA 1 cut(s) 224
BstBAI YACGTR 5 cut(s) 457, 502, 589, 634, 679
BstC8I GCNNGC 1 cut(s) 103
BstDEI CTNAG 3 cut(s) 395, 527, 795
BstF5I GGATG 3 cut(s) 148, 335, 724
BstFNI CGCG 1 cut(s) 253
BstKTI GATC 1 cut(s) 60
BstMAI GTCTC 1 cut(s) 242
BstMBI GATC 1 cut(s) 57
BstMCI CGRYCG 2 cut(s) 152, 364
BstNI CCWGG 1 cut(s) 650
BstNSI RCATGY 1 cut(s) 231
BstSCI CCNGG 6 cut(s) 358, 425, 426, 557, 558, 648
BstSLI GKGCMC 4 cut(s) 393, 403, 525, 535
BstSNI TACGTA 1 cut(s) 634
BstUI CGCG 1 cut(s) 253
BstV1I GCAGC 2 cut(s) 67, 682
BstZI CGGCCG 1 cut(s) 361
Bsu36I CCTNAGG 2 cut(s) 395, 527
BsuRI GGCC 4 cut(s) 174, 295, 363, 523
BtrI CACGTC 2 cut(s) 291, 724
BtsCI GGATG 3 cut(s) 148, 335, 724
BtsIMutI CAGTG 1 cut(s) 250
Cac8I GCNNGC 1 cut(s) 103
Cfr10I RCCGGY 1 cut(s) 151
Cfr13I GGNCC 3 cut(s) 294, 521, 522
Cfr9I CCCGGG 2 cut(s) 426, 558
CseI GACGC 3 cut(s) 259, 482, 614
Csp6I GTAC 5 cut(s) 225, 454, 586, 676, 768
CspAI ACCGGT 1 cut(s) 151
CviAII CATG 3 cut(s) 228, 493, 715
CviJI RGCY 7 cut(s) 67, 80, 174, 268, 295, 363, 523
CviKI_1 RGCY 7 cut(s) 67, 80, 174, 268, 295, 363, 523
CviQI GTAC 5 cut(s) 225, 454, 586, 676, 768
DdeI CTNAG 3 cut(s) 395, 527, 795
DpnI GATC 1 cut(s) 59
DpnII GATC 1 cut(s) 57
DrdI GACNNNNNNGTC 1 cut(s) 383
DseDI GACNNNNNNGTC 1 cut(s) 383
EaeI YGGCCR 1 cut(s) 361
EagI CGGCCG 1 cut(s) 361
EclXI CGGCCG 1 cut(s) 361
Eco105I TACGTA 1 cut(s) 634
Eco130I CCWWGG 1 cut(s) 175
Eco24I GRGCYC 1 cut(s) 525
Eco52I CGGCCG 1 cut(s) 361
Eco57I CTGAAG 1 cut(s) 89
Eco81I CCTNAGG 2 cut(s) 395, 527
Eco88I CYCGRG 2 cut(s) 426, 558
EcoO109I RGGNCCY 1 cut(s) 522
EcoRII CCWGG 1 cut(s) 648
EcoT14I CCWWGG 1 cut(s) 175
EcoT22I ATGCAT 1 cut(s) 50
EcoT38I GRGCYC 1 cut(s) 525
ErhI CCWWGG 1 cut(s) 175
Esp3I CGTCTC 1 cut(s) 242
FaeI CATG 3 cut(s) 231, 496, 718
FatI CATG 3 cut(s) 227, 492, 714
Fnu4HI GCNGC 5 cut(s) 65, 81, 423, 555, 696
FokI GGATG 3 cut(s) 155, 342, 731
FriOI GRGCYC 1 cut(s) 525
Fsp4HI GCNGC 5 cut(s) 65, 81, 423, 555, 696
FspBI CTAG 3 cut(s) 446, 578, 668
GluI GCNGC 5 cut(s) 65, 81, 423, 555, 696
HaeIII GGCC 4 cut(s) 174, 295, 363, 523
HapII CCGG 4 cut(s) 152, 360, 427, 559
HgaI GACGC 3 cut(s) 259, 482, 614
Hin1I GRCGYC 1 cut(s) 384
Hin1II CATG 3 cut(s) 231, 496, 718
HinfI GANTC 2 cut(s) 414, 546
HpaII CCGG 4 cut(s) 152, 360, 427, 559
HphI GGTGA 2 cut(s) 166, 225
Hpy166II GTNNAC 1 cut(s) 770
Hpy188I TCNGA 2 cut(s) 349, 545
Hpy188III TCNNGA 2 cut(s) 52, 140
Hpy8I GTNNAC 1 cut(s) 770
Hpy99I CGWCG 2 cut(s) 389, 521
HpyCH4III ACNGT 4 cut(s) 245, 468, 600, 690
HpyCH4V TGCA 9 cut(s) 48, 83, 460, 490, 592, 622, 682, 698, 745
HpyF3I CTNAG 3 cut(s) 395, 527, 795
Hsp92I GRCGYC 1 cut(s) 384
Hsp92II CATG 3 cut(s) 231, 496, 718
Kzo9I GATC 1 cut(s) 57
LpnPI CCDG 9 cut(s) 46, 87, 125, 165, 373, 440, 572, 635, 662
Lsp1109I GCAGC 2 cut(s) 67, 682
LweI GCATC 1 cut(s) 57
MaeI CTAG 3 cut(s) 446, 578, 668
MaeIII GTNAC 2 cut(s) 191, 332
MalI GATC 1 cut(s) 59
MboI GATC 1 cut(s) 57
MboII GAAGA 5 cut(s) 6, 67, 82, 134, 143
MhlI GDGCHC 4 cut(s) 393, 403, 525, 535
MluI ACGCGT 1 cut(s) 251
MmeI TCCRAC 2 cut(s) 450, 582
MnlI CCTC 5 cut(s) 158, 196, 246, 279, 373
Mph1103I ATGCAT 1 cut(s) 50
MroXI GAANNNNTTC 2 cut(s) 135, 354
MslI CAYNNNNRTG 2 cut(s) 24, 717
MspI CCGG 4 cut(s) 152, 360, 427, 559
MspR9I CCNGG 6 cut(s) 360, 427, 428, 559, 560, 650
Mva1269I GAATGC 1 cut(s) 745
MvaI CCWGG 1 cut(s) 650
MvnI CGCG 1 cut(s) 253
NciI CCSGG 5 cut(s) 360, 427, 428, 559, 560
NdeII GATC 1 cut(s) 57
NlaIII CATG 3 cut(s) 231, 496, 718
NlaIV GGNNCC 4 cut(s) 402, 523, 524, 534
NmuCI GTSAC 1 cut(s) 332
NsiI ATGCAT 1 cut(s) 50
NspI RCATGY 1 cut(s) 231
PasI CCCWGGG 1 cut(s) 649
PcsI WCGNNNNNNNCGW 2 cut(s) 384, 639
PctI GAATGC 1 cut(s) 745
PdmI GAANNNNTTC 2 cut(s) 135, 354
PfeI GAWTC 2 cut(s) 414, 546
PinAI ACCGGT 1 cut(s) 151
PkrI GCNGC 5 cut(s) 66, 82, 424, 556, 697
Ppu21I YACGTR 5 cut(s) 457, 502, 589, 634, 679
Psp6I CCWGG 1 cut(s) 648
PspGI CCWGG 1 cut(s) 648
PspN4I GGNNCC 4 cut(s) 402, 523, 524, 534
PspOMI GGGCCC 1 cut(s) 521
PspPI GGNCC 3 cut(s) 294, 521, 522
RsaI GTAC 5 cut(s) 226, 455, 587, 677, 769
RsaNI GTAC 5 cut(s) 225, 454, 586, 676, 768
RseI CAYNNNNRTG 2 cut(s) 24, 717
SatI GCNGC 5 cut(s) 65, 81, 423, 555, 696
Sau3AI GATC 1 cut(s) 57
Sau96I GGNCC 3 cut(s) 294, 521, 522
ScrFI CCNGG 6 cut(s) 360, 427, 428, 559, 560, 650
SduI GDGCHC 4 cut(s) 393, 403, 525, 535
SfaNI GCATC 1 cut(s) 57
SmaI CCCGGG 2 cut(s) 428, 560
SmiMI CAYNNNNRTG 2 cut(s) 24, 717
SnaBI TACGTA 1 cut(s) 634
SsiI CCGC 4 cut(s) 64, 423, 555, 710
SspI AATATT 2 cut(s) 510, 732
SspMI CTAG 3 cut(s) 446, 578, 668
StyD4I CCNGG 6 cut(s) 358, 425, 426, 557, 558, 648
StyI CCWWGG 1 cut(s) 175
TaaI ACNGT 4 cut(s) 245, 468, 600, 690
TatI WGTACW 1 cut(s) 224
TauI GCSGC 3 cut(s) 67, 425, 557
TfiI GAWTC 2 cut(s) 414, 546
TscAI CASTG 1 cut(s) 250
TseFI GTSAC 1 cut(s) 332
TseI GCWGC 2 cut(s) 80, 695
Tsp45I GTSAC 1 cut(s) 332
TspDTI ATGAA 1 cut(s) 135
TspGWI ACGGA 1 cut(s) 271
TspMI CCCGGG 2 cut(s) 426, 558
TspRI CASTG 1 cut(s) 250
XapI RAATTY 8 cut(s) 32, 135, 435, 480, 567, 612, 658, 702
XceI RCATGY 1 cut(s) 231
XmaI CCCGGG 2 cut(s) 426, 558
XmnI GAANNNNTTC 2 cut(s) 135, 354
XspI CTAG 3 cut(s) 446, 578, 668
ZraI GACGTC 1 cut(s) 385
Zsp2I ATGCAT 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.