No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1130, 1552 |
| AatII | GACGTC | 1 cut(s) | 565 |
| AccI | GTMKAC | 1 cut(s) | 350 |
| AccIII | TCCGGA | 1 cut(s) | 1330 |
| AciI | CCGC | 2 cut(s) | 429, 1277 |
| AcoI | YGGCCR | 2 cut(s) | 607, 629 |
| AcsI | RAATTY | 7 cut(s) | 198, 600, 871, 1035, 1153, 1483, 1528 |
| AcuI | CTGAAG | 2 cut(s) | 468, 1244 |
| AcvI | CACGTG | 2 cut(s) | 149, 1288 |
| AcyI | GRCGYC | 1 cut(s) | 562 |
| AdeI | CACNNNGTG | 1 cut(s) | 1288 |
| AfaI | GTAC | 3 cut(s) | 618, 696, 1385 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 488, 974, 1088 |
| AflIII | ACRYGT | 3 cut(s) | 148, 619, 1287 |
| AgsI | TTSAA | 7 cut(s) | 85, 236, 682, 811, 1148, 1159, 1538 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 473 |
| AjnI | CCWGG | 1 cut(s) | 967 |
| AluBI | AGCT | 9 cut(s) | 388, 505, 591, 685, 737, 1142, 1470, 1493, 1541 |
| AluI | AGCT | 9 cut(s) | 388, 505, 591, 685, 737, 1142, 1470, 1493, 1541 |
| Alw26I | GTCTC | 1 cut(s) | 1177 |
| Ama87I | CYCGRG | 1 cut(s) | 554 |
| Aor13HI | TCCGGA | 1 cut(s) | 1330 |
| AoxI | GGCC | 5 cut(s) | 607, 629, 1114, 1162, 1227 |
| ApaI | GGGCCC | 1 cut(s) | 1118 |
| ApeKI | GCWGC | 3 cut(s) | 426, 588, 1361 |
| ApoI | RAATTY | 7 cut(s) | 198, 600, 871, 1035, 1153, 1483, 1528 |
| AseI | ATTAAT | 2 cut(s) | 435, 1421 |
| AspS9I | GGNCC | 6 cut(s) | 160, 467, 1114, 1115, 1163, 1394 |
| AsuHPI | GGTGA | 4 cut(s) | 171, 535, 759, 1395 |
| AvaI | CYCGRG | 1 cut(s) | 554 |
| AvaII | GGWCC | 3 cut(s) | 160, 467, 1394 |
| BaeGI | GKGCMC | 1 cut(s) | 1118 |
| BalI | TGGCCA | 2 cut(s) | 609, 631 |
| BamHI | GGATCC | 4 cut(s) | 977, 988, 1210, 1333 |
| BanII | GRGCYC | 1 cut(s) | 1118 |
| BauI | CACGAG | 1 cut(s) | 462 |
| BbrPI | CACGTG | 2 cut(s) | 149, 1288 |
| BbvI | GCAGC | 3 cut(s) | 413, 600, 1373 |
| BccI | CCATC | 1 cut(s) | 1241 |
| BceAI | ACGGC | 1 cut(s) | 1177 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 562, 596 |
| BciT130I | CCWGG | 1 cut(s) | 969 |
| BcoDI | GTCTC | 1 cut(s) | 1177 |
| BfaI | CTAG | 4 cut(s) | 171, 305, 734, 1007 |
| BisI | GCNGC | 3 cut(s) | 427, 589, 1362 |
| BlsI | GCNGC | 3 cut(s) | 428, 590, 1363 |
| Bme1390I | CCNGG | 1 cut(s) | 969 |
| Bme18I | GGWCC | 3 cut(s) | 160, 467, 1394 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 473 |
| BmeT110I | CYCGRG | 1 cut(s) | 554 |
| BmgT120I | GGNCC | 6 cut(s) | 160, 467, 1114, 1115, 1163, 1394 |
| BmiI | GGNNCC | 7 cut(s) | 162, 979, 990, 1115, 1116, 1212, 1335 |
| BmrFI | CCNGG | 1 cut(s) | 969 |
| BmsI | GCATC | 3 cut(s) | 105, 338, 665 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1178 |
| BsaAI | YACGTR | 3 cut(s) | 149, 1288, 1383 |
| BsaBI | GATNNNNATC | 2 cut(s) | 51, 894 |
| BsaHI | GRCGYC | 1 cut(s) | 562 |
| BsaJI | CCNNGG | 3 cut(s) | 344, 967, 1087 |
| BsaWI | WCCGGW | 2 cut(s) | 1330, 1391 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1174, 1204, 1361, 1391 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 488, 974, 1088 |
| Bse1I | ACTGG | 2 cut(s) | 473, 751 |
| Bse8I | GATNNNNATC | 2 cut(s) | 51, 894 |
| BseAI | TCCGGA | 1 cut(s) | 1330 |
| BseBI | CCWGG | 1 cut(s) | 969 |
| BseDI | CCNNGG | 3 cut(s) | 344, 967, 1087 |
| BseGI | GGATG | 3 cut(s) | 136, 329, 400 |
| BseJI | GATNNNNATC | 2 cut(s) | 51, 894 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 488, 974, 1088 |
| BseMII | CTCAG | 3 cut(s) | 402, 1192, 1201 |
| BseNI | ACTGG | 2 cut(s) | 473, 751 |
| BseSI | GKGCMC | 1 cut(s) | 1118 |
| BseXI | GCAGC | 3 cut(s) | 413, 600, 1373 |
| BshFI | GGCC | 5 cut(s) | 609, 631, 1116, 1164, 1229 |
| BsiHKCI | CYCGRG | 1 cut(s) | 554 |
| BsiSI | CCGG | 3 cut(s) | 981, 1331, 1392 |
| BslFI | GGGAC | 2 cut(s) | 541, 995 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 488, 974, 1088 |
| BsmAI | GTCTC | 1 cut(s) | 1177 |
| BsmFI | GGGAC | 2 cut(s) | 541, 995 |
| BsnI | GGCC | 5 cut(s) | 609, 631, 1116, 1164, 1229 |
| BsoBI | CYCGRG | 1 cut(s) | 554 |
| Bsp120I | GGGCCC | 1 cut(s) | 1114 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1118 |
| Bsp13I | TCCGGA | 1 cut(s) | 1330 |
| BspACI | CCGC | 2 cut(s) | 429, 1277 |
| BspANI | GGCC | 5 cut(s) | 609, 631, 1116, 1164, 1229 |
| BspCNI | CTCAG | 3 cut(s) | 403, 1191, 1200 |
| BspEI | TCCGGA | 1 cut(s) | 1330 |
| BspLI | GGNNCC | 7 cut(s) | 162, 979, 990, 1115, 1116, 1212, 1335 |
| BsrI | ACTGG | 2 cut(s) | 473, 751 |
| BssECI | CCNNGG | 3 cut(s) | 344, 967, 1087 |
| BssNI | GRCGYC | 1 cut(s) | 562 |
| BssSI | CACGAG | 1 cut(s) | 462 |
| Bst2BI | CACGAG | 1 cut(s) | 462 |
| Bst2UI | CCWGG | 1 cut(s) | 969 |
| Bst4CI | ACNGT | 2 cut(s) | 538, 616 |
| BstACI | GRCGYC | 1 cut(s) | 562 |
| BstBAI | YACGTR | 3 cut(s) | 149, 1288, 1383 |
| BstC8I | GCNNGC | 1 cut(s) | 575 |
| BstDEI | CTNAG | 6 cut(s) | 334, 411, 910, 959, 1178, 1187 |
| BstDSI | CCRYGG | 1 cut(s) | 1087 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 486 |
| BstF5I | GGATG | 3 cut(s) | 136, 329, 400 |
| BstMAI | GTCTC | 1 cut(s) | 1177 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 565, 574, 653 |
| BstNI | CCWGG | 1 cut(s) | 969 |
| BstNSI | RCATGY | 1 cut(s) | 623 |
| BstSCI | CCNGG | 1 cut(s) | 967 |
| BstSLI | GKGCMC | 1 cut(s) | 1118 |
| BstV1I | GCAGC | 3 cut(s) | 413, 600, 1373 |
| BstX2I | RGATCY | 8 cut(s) | 889, 915, 962, 977, 988, 1168, 1210, 1333 |
| BstYI | RGATCY | 8 cut(s) | 889, 915, 962, 977, 988, 1168, 1210, 1333 |
| BsuRI | GGCC | 5 cut(s) | 609, 631, 1116, 1164, 1229 |
| BtgI | CCRYGG | 1 cut(s) | 1087 |
| BtgZI | GCGATG | 1 cut(s) | 128 |
| BtsCI | GGATG | 3 cut(s) | 136, 329, 400 |
| BtsIMutI | CAGTG | 3 cut(s) | 17, 1220, 1337 |
| Cac8I | GCNNGC | 1 cut(s) | 575 |
| Cfr13I | GGNCC | 6 cut(s) | 160, 467, 1114, 1115, 1163, 1394 |
| Csp6I | GTAC | 3 cut(s) | 617, 695, 1384 |
| CviAII | CATG | 5 cut(s) | 445, 620, 868, 880, 1110 |
| CviQI | GTAC | 3 cut(s) | 617, 695, 1384 |
| DdeI | CTNAG | 6 cut(s) | 334, 411, 910, 959, 1178, 1187 |
| DraI | TTTAAA | 3 cut(s) | 762, 828, 936 |
| DraIII | CACNNNGTG | 1 cut(s) | 1288 |
| DriI | GACNNNNNGTC | 1 cut(s) | 473 |
| EaeI | YGGCCR | 2 cut(s) | 607, 629 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 473 |
| EciI | GGCGGA | 1 cut(s) | 1292 |
| Eco24I | GRGCYC | 1 cut(s) | 1118 |
| Eco32I | GATATC | 1 cut(s) | 1044 |
| Eco47I | GGWCC | 3 cut(s) | 160, 467, 1394 |
| Eco57I | CTGAAG | 2 cut(s) | 468, 1244 |
| Eco72I | CACGTG | 2 cut(s) | 149, 1288 |
| Eco88I | CYCGRG | 1 cut(s) | 554 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 486 |
| EcoO109I | RGGNCCY | 3 cut(s) | 160, 1114, 1115 |
| EcoRI | GAATTC | 1 cut(s) | 871 |
| EcoRII | CCWGG | 1 cut(s) | 967 |
| EcoRV | GATATC | 1 cut(s) | 1044 |
| EcoT22I | ATGCAT | 1 cut(s) | 141 |
| EcoT38I | GRGCYC | 1 cut(s) | 1118 |
| FaeI | CATG | 5 cut(s) | 448, 623, 871, 883, 1113 |
| FaqI | GGGAC | 2 cut(s) | 541, 995 |
| FatI | CATG | 5 cut(s) | 444, 619, 867, 879, 1109 |
| FblI | GTMKAC | 1 cut(s) | 350 |
| Fnu4HI | GCNGC | 3 cut(s) | 427, 589, 1362 |
| FokI | GGATG | 3 cut(s) | 143, 316, 387 |
| FriOI | GRGCYC | 1 cut(s) | 1118 |
| Fsp4HI | GCNGC | 3 cut(s) | 427, 589, 1362 |
| FspBI | CTAG | 4 cut(s) | 171, 305, 734, 1007 |
| GluI | GCNGC | 3 cut(s) | 427, 589, 1362 |
| HaeIII | GGCC | 5 cut(s) | 609, 631, 1116, 1164, 1229 |
| HapII | CCGG | 3 cut(s) | 981, 1331, 1392 |
| Hin1I | GRCGYC | 1 cut(s) | 562 |
| Hin1II | CATG | 5 cut(s) | 448, 623, 871, 883, 1113 |
| HindIII | AAGCTT | 2 cut(s) | 1468, 1539 |
| HinfI | GANTC | 9 cut(s) | 262, 313, 520, 529, 901, 1148, 1185, 1216, 1370 |
| HpaII | CCGG | 3 cut(s) | 981, 1331, 1392 |
| HphI | GGTGA | 4 cut(s) | 171, 535, 759, 1395 |
| Hpy166II | GTNNAC | 5 cut(s) | 351, 467, 712, 1403, 1479 |
| Hpy188I | TCNGA | 9 cut(s) | 412, 534, 584, 598, 865, 900, 1041, 1215, 1465 |
| Hpy188III | TCNNGA | 4 cut(s) | 305, 498, 1180, 1331 |
| Hpy8I | GTNNAC | 5 cut(s) | 351, 467, 712, 1403, 1479 |
| Hpy99I | CGWCG | 2 cut(s) | 564, 567 |
| HpyAV | CCTTC | 4 cut(s) | 151, 492, 1008, 1219 |
| HpyCH4III | ACNGT | 2 cut(s) | 538, 616 |
| HpyCH4IV | ACGT | 5 cut(s) | 148, 562, 1287, 1311, 1382 |
| HpyCH4V | TGCA | 5 cut(s) | 118, 139, 573, 1361, 1509 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 565, 574, 653 |
| HpyF3I | CTNAG | 6 cut(s) | 334, 411, 910, 959, 1178, 1187 |
| HpySE526I | ACGT | 5 cut(s) | 148, 562, 1287, 1311, 1382 |
| Hsp92I | GRCGYC | 1 cut(s) | 562 |
| Hsp92II | CATG | 5 cut(s) | 448, 623, 871, 883, 1113 |
| Kpn2I | TCCGGA | 1 cut(s) | 1330 |
| LmnI | GCTCC | 2 cut(s) | 500, 510 |
| Lsp1109I | GCAGC | 3 cut(s) | 413, 600, 1373 |
| LweI | GCATC | 3 cut(s) | 105, 338, 665 |
| MaeI | CTAG | 4 cut(s) | 171, 305, 734, 1007 |
| MaeII | ACGT | 5 cut(s) | 148, 562, 1287, 1311, 1382 |
| MboII | GAAGA | 3 cut(s) | 651, 884, 1014 |
| MfeI | CAATTG | 1 cut(s) | 1300 |
| MflI | RGATCY | 8 cut(s) | 889, 915, 962, 977, 988, 1168, 1210, 1333 |
| MhlI | GDGCHC | 1 cut(s) | 1118 |
| MlsI | TGGCCA | 2 cut(s) | 609, 631 |
| MluNI | TGGCCA | 2 cut(s) | 609, 631 |
| MlyI | GAGTC | 5 cut(s) | 271, 322, 523, 1179, 1364 |
| MmeI | TCCRAC | 1 cut(s) | 900 |
| Mox20I | TGGCCA | 2 cut(s) | 609, 631 |
| Mph1103I | ATGCAT | 1 cut(s) | 141 |
| MroI | TCCGGA | 1 cut(s) | 1330 |
| MscI | TGGCCA | 2 cut(s) | 609, 631 |
| MseI | TTAA | 9 cut(s) | 35, 270, 339, 435, 761, 827, 935, 941, 1421 |
| Msp20I | TGGCCA | 2 cut(s) | 609, 631 |
| MspI | CCGG | 3 cut(s) | 981, 1331, 1392 |
| MspR9I | CCNGG | 1 cut(s) | 969 |
| MunI | CAATTG | 1 cut(s) | 1300 |
| MvaI | CCWGG | 1 cut(s) | 969 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 565, 574, 653 |
| NlaIII | CATG | 5 cut(s) | 448, 623, 871, 883, 1113 |
| NlaIV | GGNNCC | 7 cut(s) | 162, 979, 990, 1115, 1116, 1212, 1335 |
| NsiI | ATGCAT | 1 cut(s) | 141 |
| NspI | RCATGY | 1 cut(s) | 623 |
| PciI | ACATGT | 1 cut(s) | 619 |
| PfeI | GAWTC | 4 cut(s) | 520, 901, 1148, 1216 |
| PkrI | GCNGC | 3 cut(s) | 428, 590, 1363 |
| PleI | GAGTC | 5 cut(s) | 270, 321, 523, 1179, 1364 |
| PmaCI | CACGTG | 2 cut(s) | 149, 1288 |
| PmlI | CACGTG | 2 cut(s) | 149, 1288 |
| PpsI | GAGTC | 5 cut(s) | 270, 321, 523, 1179, 1364 |
| Ppu21I | YACGTR | 3 cut(s) | 149, 1288, 1383 |
| PpuMI | RGGWCCY | 1 cut(s) | 160 |
| PscI | ACATGT | 1 cut(s) | 619 |
| PshBI | ATTAAT | 2 cut(s) | 435, 1421 |
| PsiI | TTATAA | 2 cut(s) | 1130, 1552 |
| Psp5II | RGGWCCY | 1 cut(s) | 160 |
| Psp6I | CCWGG | 1 cut(s) | 967 |
| PspCI | CACGTG | 2 cut(s) | 149, 1288 |
| PspGI | CCWGG | 1 cut(s) | 967 |
| PspN4I | GGNNCC | 7 cut(s) | 162, 979, 990, 1115, 1116, 1212, 1335 |
| PspOMI | GGGCCC | 1 cut(s) | 1114 |
| PspPI | GGNCC | 6 cut(s) | 160, 467, 1114, 1115, 1163, 1394 |
| PspPPI | RGGWCCY | 1 cut(s) | 160 |
| PsuI | RGATCY | 8 cut(s) | 889, 915, 962, 977, 988, 1168, 1210, 1333 |
| RsaI | GTAC | 3 cut(s) | 618, 696, 1385 |
| RsaNI | GTAC | 3 cut(s) | 617, 695, 1384 |
| SaqAI | TTAA | 9 cut(s) | 35, 270, 339, 435, 761, 827, 935, 941, 1421 |
| SatI | GCNGC | 3 cut(s) | 427, 589, 1362 |
| Sau96I | GGNCC | 6 cut(s) | 160, 467, 1114, 1115, 1163, 1394 |
| SchI | GAGTC | 5 cut(s) | 271, 322, 523, 1179, 1364 |
| ScrFI | CCNGG | 1 cut(s) | 969 |
| SduI | GDGCHC | 1 cut(s) | 1118 |
| SfaNI | GCATC | 3 cut(s) | 105, 338, 665 |
| SinI | GGWCC | 3 cut(s) | 160, 467, 1394 |
| SsiI | CCGC | 2 cut(s) | 429, 1277 |
| SspI | AATATT | 1 cut(s) | 651 |
| SspMI | CTAG | 4 cut(s) | 171, 305, 734, 1007 |
| StyD4I | CCNGG | 1 cut(s) | 967 |
| TaaI | ACNGT | 2 cut(s) | 538, 616 |
| TaiI | ACGT | 5 cut(s) | 151, 565, 1290, 1314, 1385 |
| TaqII | GACCGA | 1 cut(s) | 336 |
| TatI | WGTACW | 1 cut(s) | 694 |
| TfiI | GAWTC | 4 cut(s) | 520, 901, 1148, 1216 |
| Tru1I | TTAA | 9 cut(s) | 35, 270, 339, 435, 761, 827, 935, 941, 1421 |
| Tru9I | TTAA | 9 cut(s) | 35, 270, 339, 435, 761, 827, 935, 941, 1421 |
| TscAI | CASTG | 3 cut(s) | 17, 1227, 1344 |
| TseI | GCWGC | 3 cut(s) | 426, 588, 1361 |
| TspDTI | ATGAA | 6 cut(s) | 59, 735, 884, 884, 896, 1469 |
| TspGWI | ACGGA | 1 cut(s) | 1104 |
| TspRI | CASTG | 3 cut(s) | 17, 1227, 1344 |
| VpaK11BI | GGWCC | 3 cut(s) | 160, 467, 1394 |
| VspI | ATTAAT | 2 cut(s) | 435, 1421 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 486 |
| XapI | RAATTY | 7 cut(s) | 198, 600, 871, 1035, 1153, 1483, 1528 |
| XbaI | TCTAGA | 1 cut(s) | 304 |
| XceI | RCATGY | 1 cut(s) | 623 |
| XmiI | GTMKAC | 1 cut(s) | 350 |
| XspI | CTAG | 4 cut(s) | 171, 305, 734, 1007 |
| ZraI | GACGTC | 1 cut(s) | 563 |
| Zsp2I | ATGCAT | 1 cut(s) | 141 |