Root hair defective 3 GTP-binding protein (RHD3)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 885 |
| AccBSI | CCGCTC | 2 cut(s) | 433, 1647 |
| AccI | GTMKAC | 2 cut(s) | 1285, 1336 |
| AccII | CGCG | 1 cut(s) | 1507 |
| AciI | CCGC | 9 cut(s) | 433, 813, 1133, 1249, 1505, 1507, 1645, 2160, 2323 |
| AclWI | GGATC | 6 cut(s) | 568, 581, 1322, 1335, 1335, 1645 |
| AcoI | YGGCCR | 1 cut(s) | 1508 |
| AcyI | GRCGYC | 1 cut(s) | 886 |
| AfaI | GTAC | 4 cut(s) | 532, 1414, 1700, 2336 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 347, 509 |
| AflIII | ACRYGT | 3 cut(s) | 1280, 2103, 2132 |
| AjnI | CCWGG | 5 cut(s) | 569, 824, 853, 1330, 1575 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1617, 1649, 1750, 1782 |
| AluBI | AGCT | 7 cut(s) | 109, 331, 372, 420, 877, 983, 2024 |
| AluI | AGCT | 7 cut(s) | 109, 331, 372, 420, 877, 983, 2024 |
| Alw21I | GWGCWC | 1 cut(s) | 1366 |
| Alw26I | GTCTC | 2 cut(s) | 193, 2313 |
| AlwI | GGATC | 6 cut(s) | 568, 581, 1322, 1335, 1335, 1645 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 825 |
| Ama87I | CYCGRG | 1 cut(s) | 1432 |
| AoxI | GGCC | 3 cut(s) | 822, 1490, 1508 |
| ApeKI | GCWGC | 3 cut(s) | 877, 965, 1496 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1763, 1795 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 129, 999, 2006 |
| AspA2I | CCTAGG | 1 cut(s) | 707 |
| AspLEI | GCGC | 1 cut(s) | 888 |
| AspS9I | GGNCC | 6 cut(s) | 822, 851, 1419, 1779, 2060, 2347 |
| AsuC2I | CCSGG | 3 cut(s) | 1210, 1433, 1434 |
| AsuHPI | GGTGA | 6 cut(s) | 693, 1000, 1218, 1984, 2186, 2215 |
| AsuII | TTCGAA | 1 cut(s) | 1089 |
| AvaI | CYCGRG | 1 cut(s) | 1432 |
| AvaII | GGWCC | 5 cut(s) | 851, 1419, 1779, 2060, 2347 |
| AvrII | CCTAGG | 1 cut(s) | 707 |
| AxyI | CCTNAGG | 1 cut(s) | 504 |
| BamHI | GGATCC | 2 cut(s) | 573, 1327 |
| BanI | GGYRCC | 1 cut(s) | 885 |
| BanII | GRGCYC | 1 cut(s) | 1350 |
| BbsI | GAAGAC | 2 cut(s) | 1664, 1870 |
| Bbv12I | GWGCWC | 1 cut(s) | 1366 |
| BbvI | GCAGC | 3 cut(s) | 864, 977, 1508 |
| BccI | CCATC | 7 cut(s) | 736, 877, 1183, 1306, 1316, 1527, 1559 |
| BceAI | ACGGC | 1 cut(s) | 1889 |
| BciT130I | CCWGG | 5 cut(s) | 571, 826, 855, 1332, 1577 |
| BcnI | CCSGG | 3 cut(s) | 1210, 1433, 1434 |
| BcoDI | GTCTC | 2 cut(s) | 193, 2313 |
| BfaI | CTAG | 2 cut(s) | 557, 708 |
| BfmI | CTRYAG | 2 cut(s) | 748, 1494 |
| BfoI | RGCGCY | 1 cut(s) | 889 |
| BisI | GCNGC | 7 cut(s) | 878, 966, 1133, 1249, 1497, 1505, 1508 |
| BlnI | CCTAGG | 1 cut(s) | 707 |
| BlpI | GCTNAGC | 1 cut(s) | 1244 |
| BlsI | GCNGC | 7 cut(s) | 879, 967, 1134, 1250, 1498, 1506, 1509 |
| BmcAI | AGTACT | 1 cut(s) | 532 |
| Bme1390I | CCNGG | 8 cut(s) | 571, 826, 855, 1210, 1332, 1433, 1434, 1577 |
| Bme18I | GGWCC | 5 cut(s) | 851, 1419, 1779, 2060, 2347 |
| BmeT110I | CYCGRG | 1 cut(s) | 1432 |
| BmgT120I | GGNCC | 6 cut(s) | 822, 851, 1419, 1779, 2060, 2347 |
| BmiI | GGNNCC | 3 cut(s) | 575, 887, 1329 |
| BmrFI | CCNGG | 8 cut(s) | 571, 826, 855, 1210, 1332, 1433, 1434, 1577 |
| BmrI | ACTGGG | 2 cut(s) | 947, 1865 |
| BmsI | GCATC | 4 cut(s) | 345, 765, 1549, 2353 |
| BmuI | ACTGGG | 2 cut(s) | 947, 1865 |
| BpiI | GAAGAC | 2 cut(s) | 1664, 1870 |
| BpmI | CTGGAG | 2 cut(s) | 847, 1559 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2025 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1244 |
| Bpu14I | TTCGAA | 1 cut(s) | 1089 |
| BpuMI | CCSGG | 3 cut(s) | 1210, 1433, 1434 |
| Bsa29I | ATCGAT | 1 cut(s) | 1915 |
| BsaAI | YACGTR | 1 cut(s) | 1283 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1326 |
| BsaHI | GRCGYC | 1 cut(s) | 886 |
| BsaJI | CCNNGG | 7 cut(s) | 569, 707, 1382, 1431, 1432, 1487, 1505 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 688, 718 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 347, 509 |
| Bse1I | ACTGG | 2 cut(s) | 953, 1860 |
| Bse21I | CCTNAGG | 1 cut(s) | 504 |
| Bse3DI | GCAATG | 1 cut(s) | 330 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1326 |
| BseBI | CCWGG | 5 cut(s) | 571, 826, 855, 1332, 1577 |
| BseCI | ATCGAT | 1 cut(s) | 1915 |
| BseDI | CCNNGG | 7 cut(s) | 569, 707, 1382, 1431, 1432, 1487, 1505 |
| BseGI | GGATG | 5 cut(s) | 360, 1175, 1403, 1938, 2368 |
| BseJI | GATNNNNATC | 1 cut(s) | 1326 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 347, 509 |
| BseMI | GCAATG | 1 cut(s) | 330 |
| BseMII | CTCAG | 5 cut(s) | 346, 1258, 1287, 1520, 2039 |
| BseNI | ACTGG | 2 cut(s) | 953, 1860 |
| BseRI | GAGGAG | 1 cut(s) | 846 |
| BseX3I | CGGCCG | 1 cut(s) | 1508 |
| BseXI | GCAGC | 3 cut(s) | 864, 977, 1508 |
| BsgI | GTGCAG | 1 cut(s) | 2303 |
| Bsh1236I | CGCG | 1 cut(s) | 1507 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1511 |
| BshFI | GGCC | 3 cut(s) | 824, 1492, 1510 |
| BshNI | GGYRCC | 1 cut(s) | 885 |
| BshVI | ATCGAT | 1 cut(s) | 1915 |
| BsiEI | CGRYCG | 1 cut(s) | 1511 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1366 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1432 |
| BsiSI | CCGG | 2 cut(s) | 1210, 1433 |
| BslFI | GGGAC | 1 cut(s) | 1594 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 347, 509 |
| BsmAI | GTCTC | 2 cut(s) | 193, 2313 |
| BsmFI | GGGAC | 1 cut(s) | 1594 |
| BsnI | GGCC | 3 cut(s) | 824, 1492, 1510 |
| BsoBI | CYCGRG | 1 cut(s) | 1432 |
| Bsp119I | TTCGAA | 1 cut(s) | 1089 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1350, 1366 |
| Bsp1407I | TGTACA | 2 cut(s) | 1698, 2334 |
| Bsp143I | GATC | 8 cut(s) | 479, 573, 1005, 1327, 1340, 1637, 1912, 1916 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1244 |
| Bsp19I | CCATGG | 2 cut(s) | 1382, 1487 |
| BspACI | CCGC | 9 cut(s) | 433, 813, 1133, 1249, 1505, 1507, 1645, 2160, 2323 |
| BspANI | GGCC | 3 cut(s) | 824, 1492, 1510 |
| BspCNI | CTCAG | 5 cut(s) | 345, 1257, 1286, 1521, 2038 |
| BspDI | ATCGAT | 1 cut(s) | 1915 |
| BspFNI | CGCG | 1 cut(s) | 1507 |
| BspHI | TCATGA | 1 cut(s) | 1921 |
| BspLI | GGNNCC | 3 cut(s) | 575, 887, 1329 |
| BspMAI | CTGCAG | 1 cut(s) | 1498 |
| BspPI | GGATC | 6 cut(s) | 568, 581, 1322, 1335, 1335, 1645 |
| BspT104I | TTCGAA | 1 cut(s) | 1089 |
| BspT107I | GGYRCC | 1 cut(s) | 885 |
| BsrBI | CCGCTC | 2 cut(s) | 433, 1647 |
| BsrDI | GCAATG | 1 cut(s) | 330 |
| BsrGI | TGTACA | 2 cut(s) | 1698, 2334 |
| BsrI | ACTGG | 2 cut(s) | 953, 1860 |
| BssECI | CCNNGG | 7 cut(s) | 569, 707, 1382, 1431, 1432, 1487, 1505 |
| BssMI | GATC | 8 cut(s) | 479, 573, 1005, 1327, 1340, 1637, 1912, 1916 |
| BssNAI | GTATAC | 1 cut(s) | 1286 |
| BssNI | GRCGYC | 1 cut(s) | 886 |
| BssT1I | CCWWGG | 3 cut(s) | 707, 1382, 1487 |
| Bst1107I | GTATAC | 1 cut(s) | 1286 |
| Bst2UI | CCWGG | 5 cut(s) | 571, 826, 855, 1332, 1577 |
| Bst4CI | ACNGT | 8 cut(s) | 749, 1164, 1295, 1481, 1709, 1737, 1775, 1908 |
| Bst6I | CTCTTC | 3 cut(s) | 191, 1742, 2316 |
| BstACI | GRCGYC | 1 cut(s) | 886 |
| BstAUI | TGTACA | 2 cut(s) | 1698, 2334 |
| BstBAI | YACGTR | 1 cut(s) | 1283 |
| BstBI | TTCGAA | 1 cut(s) | 1089 |
| BstC8I | GCNNGC | 5 cut(s) | 1187, 1494, 1586, 1590, 2297 |
| BstDEI | CTNAG | 7 cut(s) | 332, 504, 651, 1244, 1273, 1529, 2025 |
| BstDSI | CCRYGG | 3 cut(s) | 1382, 1487, 1505 |
| BstF5I | GGATG | 5 cut(s) | 360, 1175, 1403, 1938, 2368 |
| BstFNI | CGCG | 1 cut(s) | 1507 |
| BstH2I | RGCGCY | 1 cut(s) | 889 |
| BstHHI | GCGC | 1 cut(s) | 888 |
| BstKTI | GATC | 8 cut(s) | 482, 576, 1008, 1330, 1343, 1640, 1915, 1919 |
| BstMAI | GTCTC | 2 cut(s) | 193, 2313 |
| BstMBI | GATC | 8 cut(s) | 479, 573, 1005, 1327, 1340, 1637, 1912, 1916 |
| BstMCI | CGRYCG | 1 cut(s) | 1511 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 378, 883 |
| BstNI | CCWGG | 5 cut(s) | 571, 826, 855, 1332, 1577 |
| BstNSI | RCATGY | 4 cut(s) | 2107, 2136, 2278, 2299 |
| BstSCI | CCNGG | 8 cut(s) | 569, 824, 853, 1208, 1330, 1431, 1432, 1575 |
| BstSFI | CTRYAG | 2 cut(s) | 748, 1494 |
| BstUI | CGCG | 1 cut(s) | 1507 |
| BstV1I | GCAGC | 3 cut(s) | 864, 977, 1508 |
| BstV2I | GAAGAC | 2 cut(s) | 1664, 1870 |
| BstX2I | RGATCY | 3 cut(s) | 573, 1327, 1637 |
| BstYI | RGATCY | 3 cut(s) | 573, 1327, 1637 |
| BstZ17I | GTATAC | 1 cut(s) | 1286 |
| BstZI | CGGCCG | 1 cut(s) | 1508 |
| Bsu15I | ATCGAT | 1 cut(s) | 1915 |
| Bsu36I | CCTNAGG | 1 cut(s) | 504 |
| BsuRI | GGCC | 3 cut(s) | 824, 1492, 1510 |
| BsuTUI | ATCGAT | 1 cut(s) | 1915 |
| BtgI | CCRYGG | 3 cut(s) | 1382, 1487, 1505 |
| BtsCI | GGATG | 5 cut(s) | 360, 1175, 1403, 1938, 2368 |
| BtsI | GCAGTG | 1 cut(s) | 365 |
| BtsIMutI | CAGTG | 1 cut(s) | 365 |
| Cac8I | GCNNGC | 5 cut(s) | 1187, 1494, 1586, 1590, 2297 |
| CaiI | CAGNNNCTG | 1 cut(s) | 825 |
| CciI | TCATGA | 1 cut(s) | 1921 |
| CfoI | GCGC | 1 cut(s) | 888 |
| Cfr13I | GGNCC | 6 cut(s) | 822, 851, 1419, 1779, 2060, 2347 |
| Cfr42I | CCGCGG | 1 cut(s) | 1508 |
| Cfr9I | CCCGGG | 1 cut(s) | 1432 |
| ClaI | ATCGAT | 1 cut(s) | 1915 |
| CseI | GACGC | 2 cut(s) | 173, 1546 |
| CsiI | ACCWGGT | 1 cut(s) | 853 |
| Csp6I | GTAC | 4 cut(s) | 531, 1413, 1699, 2335 |
| CviQI | GTAC | 4 cut(s) | 531, 1413, 1699, 2335 |
| DdeI | CTNAG | 7 cut(s) | 332, 504, 651, 1244, 1273, 1529, 2025 |
| DinI | GGCGCC | 1 cut(s) | 887 |
| DpnI | GATC | 8 cut(s) | 481, 575, 1007, 1329, 1342, 1639, 1914, 1918 |
| DpnII | GATC | 8 cut(s) | 479, 573, 1005, 1327, 1340, 1637, 1912, 1916 |
| EaeI | YGGCCR | 1 cut(s) | 1508 |
| EagI | CGGCCG | 1 cut(s) | 1508 |
| Eam1104I | CTCTTC | 3 cut(s) | 191, 1742, 2316 |
| EarI | CTCTTC | 3 cut(s) | 191, 1742, 2316 |
| EciI | GGCGGA | 1 cut(s) | 2175 |
| EclXI | CGGCCG | 1 cut(s) | 1508 |
| Eco130I | CCWWGG | 3 cut(s) | 707, 1382, 1487 |
| Eco24I | GRGCYC | 1 cut(s) | 1350 |
| Eco32I | GATATC | 1 cut(s) | 312 |
| Eco47I | GGWCC | 5 cut(s) | 851, 1419, 1779, 2060, 2347 |
| Eco52I | CGGCCG | 1 cut(s) | 1508 |
| Eco81I | CCTNAGG | 1 cut(s) | 504 |
| Eco88I | CYCGRG | 1 cut(s) | 1432 |
| EcoO109I | RGGNCCY | 1 cut(s) | 822 |
| EcoRII | CCWGG | 5 cut(s) | 569, 824, 853, 1330, 1575 |
| EcoRV | GATATC | 1 cut(s) | 312 |
| EcoT14I | CCWWGG | 3 cut(s) | 707, 1382, 1487 |
| EcoT22I | ATGCAT | 3 cut(s) | 1690, 2301, 2368 |
| EcoT38I | GRGCYC | 1 cut(s) | 1350 |
| EgeI | GGCGCC | 1 cut(s) | 887 |
| EheI | GGCGCC | 1 cut(s) | 887 |
| ErhI | CCWWGG | 3 cut(s) | 707, 1382, 1487 |
| FaqI | GGGAC | 1 cut(s) | 1594 |
| FauI | CCCGC | 2 cut(s) | 806, 1652 |
| FauNDI | CATATG | 1 cut(s) | 1684 |
| FblI | GTMKAC | 2 cut(s) | 1285, 1336 |
| Fnu4HI | GCNGC | 7 cut(s) | 878, 966, 1133, 1249, 1497, 1505, 1508 |
| FokI | GGATG | 5 cut(s) | 367, 1162, 1390, 1945, 2375 |
| FriOI | GRGCYC | 1 cut(s) | 1350 |
| Fsp4HI | GCNGC | 7 cut(s) | 878, 966, 1133, 1249, 1497, 1505, 1508 |
| FspBI | CTAG | 2 cut(s) | 557, 708 |
| GlaI | GCGC | 1 cut(s) | 887 |
| GluI | GCNGC | 7 cut(s) | 878, 966, 1133, 1249, 1497, 1505, 1508 |
| GsuI | CTGGAG | 2 cut(s) | 847, 1559 |
| HaeII | RGCGCY | 1 cut(s) | 889 |
| HaeIII | GGCC | 3 cut(s) | 824, 1492, 1510 |
| HapII | CCGG | 2 cut(s) | 1210, 1433 |
| HgaI | GACGC | 2 cut(s) | 173, 1546 |
| HhaI | GCGC | 1 cut(s) | 888 |
| Hin1I | GRCGYC | 1 cut(s) | 886 |
| Hin6I | GCGC | 1 cut(s) | 886 |
| HinP1I | GCGC | 1 cut(s) | 886 |
| HincII | GTYRAC | 4 cut(s) | 163, 236, 562, 1337 |
| HindII | GTYRAC | 4 cut(s) | 163, 236, 562, 1337 |
| HinfI | GANTC | 8 cut(s) | 225, 520, 691, 1091, 1171, 1424, 1444, 2007 |
| HpaII | CCGG | 2 cut(s) | 1210, 1433 |
| HphI | GGTGA | 6 cut(s) | 693, 1000, 1218, 1984, 2186, 2215 |
| Hpy188I | TCNGA | 5 cut(s) | 335, 1005, 1276, 1345, 1423 |
| Hpy188III | TCNNGA | 4 cut(s) | 272, 986, 1922, 2027 |
| Hpy99I | CGWCG | 1 cut(s) | 1341 |
| HpyAV | CCTTC | 5 cut(s) | 831, 1096, 1263, 1592, 1923 |
| HpyCH4III | ACNGT | 8 cut(s) | 749, 1164, 1295, 1481, 1709, 1737, 1775, 1908 |
| HpyCH4IV | ACGT | 3 cut(s) | 1282, 1983, 2303 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 378, 883 |
| HpyF3I | CTNAG | 7 cut(s) | 332, 504, 651, 1244, 1273, 1529, 2025 |
| HpySE526I | ACGT | 3 cut(s) | 1282, 1983, 2303 |
| Hsp92I | GRCGYC | 1 cut(s) | 886 |
| HspAI | GCGC | 1 cut(s) | 886 |
| KasI | GGCGCC | 1 cut(s) | 885 |
| KspI | CCGCGG | 1 cut(s) | 1508 |
| Kzo9I | GATC | 8 cut(s) | 479, 573, 1005, 1327, 1340, 1637, 1912, 1916 |
| LmnI | GCTCC | 1 cut(s) | 988 |
| Lsp1109I | GCAGC | 3 cut(s) | 864, 977, 1508 |
| LweI | GCATC | 4 cut(s) | 345, 765, 1549, 2353 |
| MabI | ACCWGGT | 1 cut(s) | 853 |
| MaeI | CTAG | 2 cut(s) | 557, 708 |
| MaeII | ACGT | 3 cut(s) | 1282, 1983, 2303 |
| MaeIII | GTNAC | 3 cut(s) | 119, 140, 955 |
| MalI | GATC | 8 cut(s) | 481, 575, 1007, 1329, 1342, 1639, 1914, 1918 |
| MbiI | CCGCTC | 2 cut(s) | 433, 1647 |
| MboI | GATC | 8 cut(s) | 479, 573, 1005, 1327, 1340, 1637, 1912, 1916 |
| MboII | GAAGA | 7 cut(s) | 208, 1632, 1664, 1759, 1872, 1875, 2303 |
| MfeI | CAATTG | 1 cut(s) | 782 |
| MflI | RGATCY | 3 cut(s) | 573, 1327, 1637 |
| MhlI | GDGCHC | 2 cut(s) | 1350, 1366 |
| Mly113I | GGCGCC | 1 cut(s) | 886 |
| MlyI | GAGTC | 2 cut(s) | 1165, 1438 |
| MmeI | TCCRAC | 1 cut(s) | 719 |
| Mph1103I | ATGCAT | 3 cut(s) | 1690, 2301, 2368 |
| MroXI | GAANNNNTTC | 3 cut(s) | 129, 999, 2006 |
| MslI | CAYNNNNRTG | 2 cut(s) | 291, 1997 |
| MspA1I | CMGCKG | 1 cut(s) | 1507 |
| MspI | CCGG | 2 cut(s) | 1210, 1433 |
| MspR9I | CCNGG | 8 cut(s) | 571, 826, 855, 1210, 1332, 1433, 1434, 1577 |
| MunI | CAATTG | 1 cut(s) | 782 |
| MvaI | CCWGG | 5 cut(s) | 571, 826, 855, 1332, 1577 |
| MvnI | CGCG | 1 cut(s) | 1507 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 378, 883 |
| NarI | GGCGCC | 1 cut(s) | 886 |
| NciI | CCSGG | 3 cut(s) | 1210, 1433, 1434 |
| NcoI | CCATGG | 2 cut(s) | 1382, 1487 |
| NdeI | CATATG | 1 cut(s) | 1684 |
| NdeII | GATC | 8 cut(s) | 479, 573, 1005, 1327, 1340, 1637, 1912, 1916 |
| NlaIV | GGNNCC | 3 cut(s) | 575, 887, 1329 |
| NmeAIII | GCCGAG | 1 cut(s) | 1536 |
| NmuCI | GTSAC | 1 cut(s) | 955 |
| NsiI | ATGCAT | 3 cut(s) | 1690, 2301, 2368 |
| NspI | RCATGY | 4 cut(s) | 2107, 2136, 2278, 2299 |
| NspV | TTCGAA | 1 cut(s) | 1089 |
| PaeI | GCATGC | 1 cut(s) | 2299 |
| PagI | TCATGA | 1 cut(s) | 1921 |
| PciI | ACATGT | 2 cut(s) | 2103, 2132 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1317, 1508, 1912 |
| PdmI | GAANNNNTTC | 3 cut(s) | 129, 999, 2006 |
| PfeI | GAWTC | 6 cut(s) | 225, 520, 691, 1091, 1424, 2007 |
| PflFI | GACNNNGTC | 1 cut(s) | 953 |
| PfoI | TCCNGGA | 1 cut(s) | 1575 |
| PkrI | GCNGC | 7 cut(s) | 879, 967, 1134, 1250, 1498, 1506, 1509 |
| PleI | GAGTC | 2 cut(s) | 1165, 1438 |
| PluTI | GGCGCC | 1 cut(s) | 889 |
| PpsI | GAGTC | 2 cut(s) | 1165, 1438 |
| Ppu21I | YACGTR | 1 cut(s) | 1283 |
| PscI | ACATGT | 2 cut(s) | 2103, 2132 |
| Psp6I | CCWGG | 5 cut(s) | 569, 824, 853, 1330, 1575 |
| PspGI | CCWGG | 5 cut(s) | 569, 824, 853, 1330, 1575 |
| PspN4I | GGNNCC | 3 cut(s) | 575, 887, 1329 |
| PspPI | GGNCC | 6 cut(s) | 822, 851, 1419, 1779, 2060, 2347 |
| PstI | CTGCAG | 1 cut(s) | 1498 |
| PstNI | CAGNNNCTG | 1 cut(s) | 825 |
| PsuI | RGATCY | 3 cut(s) | 573, 1327, 1637 |
| PsyI | GACNNNGTC | 1 cut(s) | 953 |
| RsaI | GTAC | 4 cut(s) | 532, 1414, 1700, 2336 |
| RsaNI | GTAC | 4 cut(s) | 531, 1413, 1699, 2335 |
| RseI | CAYNNNNRTG | 2 cut(s) | 291, 1997 |
| SacII | CCGCGG | 1 cut(s) | 1508 |
| SalI | GTCGAC | 1 cut(s) | 1335 |
| SatI | GCNGC | 7 cut(s) | 878, 966, 1133, 1249, 1497, 1505, 1508 |
| Sau3AI | GATC | 8 cut(s) | 479, 573, 1005, 1327, 1340, 1637, 1912, 1916 |
| Sau96I | GGNCC | 6 cut(s) | 822, 851, 1419, 1779, 2060, 2347 |
| ScaI | AGTACT | 1 cut(s) | 532 |
| SchI | GAGTC | 2 cut(s) | 1165, 1438 |
| ScrFI | CCNGG | 8 cut(s) | 571, 826, 855, 1210, 1332, 1433, 1434, 1577 |
| SduI | GDGCHC | 2 cut(s) | 1350, 1366 |
| SexAI | ACCWGGT | 1 cut(s) | 853 |
| SfaNI | GCATC | 4 cut(s) | 345, 765, 1549, 2353 |
| SfcI | CTRYAG | 2 cut(s) | 748, 1494 |
| SfoI | GGCGCC | 1 cut(s) | 887 |
| Sfr303I | CCGCGG | 1 cut(s) | 1508 |
| SfuI | TTCGAA | 1 cut(s) | 1089 |
| SgrBI | CCGCGG | 1 cut(s) | 1508 |
| SinI | GGWCC | 5 cut(s) | 851, 1419, 1779, 2060, 2347 |
| SmaI | CCCGGG | 1 cut(s) | 1434 |
| SmiI | ATTTAAAT | 1 cut(s) | 1036 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 291, 1997 |
| SphI | GCATGC | 1 cut(s) | 2299 |
| SsiI | CCGC | 9 cut(s) | 433, 813, 1133, 1249, 1505, 1507, 1645, 2160, 2323 |
| SspDI | GGCGCC | 1 cut(s) | 885 |
| SspI | AATATT | 3 cut(s) | 584, 1000, 2145 |
| SspMI | CTAG | 2 cut(s) | 557, 708 |
| StyD4I | CCNGG | 8 cut(s) | 569, 824, 853, 1208, 1330, 1431, 1432, 1575 |
| StyI | CCWWGG | 3 cut(s) | 707, 1382, 1487 |
| SwaI | ATTTAAAT | 1 cut(s) | 1036 |
| TaaI | ACNGT | 8 cut(s) | 749, 1164, 1295, 1481, 1709, 1737, 1775, 1908 |
| TaiI | ACGT | 3 cut(s) | 1285, 1986, 2306 |
| TaqI | TCGA | 6 cut(s) | 1089, 1311, 1320, 1336, 1470, 1915 |
| TatI | WGTACW | 3 cut(s) | 530, 1698, 2334 |
| TauI | GCSGC | 4 cut(s) | 1135, 1251, 1507, 1510 |
| TfiI | GAWTC | 6 cut(s) | 225, 520, 691, 1091, 1424, 2007 |
| TscAI | CASTG | 1 cut(s) | 365 |
| TseFI | GTSAC | 1 cut(s) | 955 |
| TseI | GCWGC | 3 cut(s) | 877, 965, 1496 |
| Tsp45I | GTSAC | 1 cut(s) | 955 |
| TspDTI | ATGAA | 9 cut(s) | 87, 209, 341, 1020, 1820, 1821, 1917, 2015, 2157 |
| TspGWI | ACGGA | 2 cut(s) | 908, 1477 |
| TspMI | CCCGGG | 1 cut(s) | 1432 |
| TspRI | CASTG | 1 cut(s) | 365 |
| Tth111I | GACNNNGTC | 1 cut(s) | 953 |
| VpaK11BI | GGWCC | 5 cut(s) | 851, 1419, 1779, 2060, 2347 |
| XceI | RCATGY | 4 cut(s) | 2107, 2136, 2278, 2299 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1389 |
| XmaI | CCCGGG | 1 cut(s) | 1432 |
| XmaJI | CCTAGG | 1 cut(s) | 707 |
| XmiI | GTMKAC | 2 cut(s) | 1285, 1336 |
| XmnI | GAANNNNTTC | 3 cut(s) | 129, 999, 2006 |
| XspI | CTAG | 2 cut(s) | 557, 708 |
| ZrmI | AGTACT | 1 cut(s) | 532 |
| Zsp2I | ATGCAT | 3 cut(s) | 1690, 2301, 2368 |