pycom13g25900

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
22634389 .. 22638525
4137 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g25900.12

Sequence Viewer

Length: 2619 bp
ATGCATTTGAAGCGTGACCGGACCCTGTGGGATTCCACAGTTGTTGCAAGCGCTTACTTCCCTATCCACACAAATATCCTACAAACACAGGCAAACCCTCCCTCGGCATTCCATTACACTCAATCGTCTCGATTTAAGCATATTTATGCGACTTTGTTATCTTATGTTGTTGCATTTACTTCGTTAATTTCCATTTATTTTGGTAATTTGTGTTATTTTCGTATTATTGTAGGTCCAATTGGTAAAGATGACAATAAATGGCAAAATGGAGCAATTTGTAGCAGTTTTGGACTTGGATTGGATAACATGCGTGGAGGGCATATGAGCTGGACGTTTTTGGTTTTAAATGGTGCTAGATATGTGCTAAAATTTGGAGAAATTAAAGTTGAGTTGGAGAGGAACATTATCTTATCCAACCTTATCCAAACTTATCTCAACTTATCCAGTCTTATCTTATCTTATATAACCTTATCCAACATTATCCCATTTTATCCAATGATTGTAGTATGCGTAAGTAGGGATCGTTCTAGACTCAAACAACTCAAAACAATTGAACAAAAATTGACTAACTTGACTCAAAACATTAAAGGGGAATGTGTTTTGACGAAAATTGACTTAAAACTAATAAGTTGCAGAACTAAGCTAGGTAGAGGATTCTTCTCCACACATGAACCATATGCATACAAATCAATTTCCAGTTATGGACTCAGCGACGCAATCAAATTATTCTTATTAAGTTCCCTATATGAACAGCATGATAGAGATTCATATAAAAAATCATTAAGTTCTATGAAAATCATAAGCATTGACAAGGTATTCGTAACTATGAATTGCATGATATTCCTGCCATGGATTTACTTAACTCCTTTATATTTTAGCATCAAATTTATGCATTTCTCTATAAAACAGATCAGTAAATCTCATATAACACATATGTTTATGGCTTTGAATTCACCTCTAGCTAAAACGAAATTAATTCCACATAAAGAGCCCAGAAACTCTCCAGTACTCCAATGGCCTTGGATGGTAGGTCACGTCATTAGAGCTCTTCTTCTCATTCCTTCCTTGCAAAGCTGCGGCACTATGCGGCAGATGTGTGGTGTATTTATAGGGCTAGGGGGCACCACAAAGGCTGTTAAGGAGAAGGATTACATGGCACAAACCAAGAAGGAAAAAGACTACGCTAGGGCAAAGGATAAGGCTTCTAAAACCAGATATTTAGGTGATTTAATAAAACAGGACTGGATAAGGTCTCCTTATTTTCAGCTGATTCCAAGATTTATGATTCCTTGCACTTGCACATTCCTAGCACCTTGTAAGCACCAAAAATATCCCTTCCTTGTGCTCTATACGCAAGCTATCCATTCTAGCCCAAAGCTGCTCCAAATTGCTTCAAAATGCCATTTCTTGTCATCTTTAAATGCAAAGAAACAAGCTAATAAAATCTCCCCGAGCAAAACAAAGAAAACAAAACACAACCTAAACCTTCTAACAATTATTTTAGCCATCCTTACCCTTGAGCTTATTTTAATTCATTTAAATGTAGTAACATGCCTTAGAGAATTCACTCAATTCCTCACCGGATATACTCTTTATTTTCATAGAGATTTTCTGACTACACTCCCTACACTAGGTATATGTGAGAAGATTGATGTAAACATGTATACTAGCACTCACATAAGTTATAACAAAGAAAGCCACTGCTTAGAAGCAAGAACCAGGAATTCCATATGCTCGTACCAATTTCAAACTCCACATATTGAAACACATAACAATCAAGATAGAAGTCTAAGGGTGGTAATGGGGCTAAGGTATTGGCTAACAAAGAAAGGTGATAGGAGCATATTTATGCGACTTATTTCGTGTGTTTGTAGGTCCAATTGGCTAAAGTGGCAAGAAAGTGCAAGTTGGAGCATTTTGGAGCAATTTTGGGAGGCTAGGAATCTGCTAAAGAGATGGAAGAAATTAATTCAAGATTTGGAAGAAAAGGAATTATCAATCATAATCTTTTCCTACTTATATCCCACATCGCCCAGGGGAGTGATCCTTATATGTATATTCCCATCTCTACCTAGCACGAGGCCTTTTGGGACAAGAAGGGGGCTAGAGCAATCCCATGATGGGCGACCCATTGGGAAGTTGCTCATGAGTTCCCATAAACAAAATCGTGAGGGAATGCGGGCCTGGGAAGTGATCCGCCTTGGGCCGGGATGTGACAAATTAGTATCAGAGCCTAACCCTGGCCACGTGTGTGTCGACGAGGACGTCGGGCCCCTAAGGGGGGTGGATTATTCCCATCCCTACCTAGCACAAGGACTTTTGGGAGCTCACTGGCTTCGGAGCAATCCCATGATGGGTGACCCACTGGGAGGTTCCCAAAGCGGACAATATCGTGCTATGGTGGTGGAGCGAGCCCAGGAAGTGAACCGCCCCGGGCCGGGATGTGACAATTTGGTATCAGAGCCTAACCCTGGCTGTGGTGTGCCGACGAGGACGGGATCGATCCTTATATGTATATTCCTATCTCTACCTAGCACGAGGCCTTTTGGGAGCCCAATGGCTTCGGGTTCCATAGGAACTCCGAAGTTAAGCAAGAAGGGGGCTAGAGCAATCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

873

Amino Acids

99.27

Weight (kDa)

9.67

Isoelectric Point (pI)

46.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1686
AasI GACNNNNNNGTC 1 cut(s) 2264
AatII GACGTC 1 cut(s) 2268
AccB1I GGYRCC 1 cut(s) 1121
AccI GTMKAC 2 cut(s) 1664, 2256
AciI CCGC 6 cut(s) 1077, 1087, 2179, 2197, 2382, 2428
AclWI GGATC 5 cut(s) 528, 2038, 2188, 2497, 2506
AcoI YGGCCR 1 cut(s) 2242
AcsI RAATTY 5 cut(s) 368, 884, 949, 1562, 1723
AcvI CACGTG 1 cut(s) 2248
AcyI GRCGYC 1 cut(s) 2265
AfaI GTAC 2 cut(s) 1008, 1739
AfeI AGCGCT 1 cut(s) 52
AflIII ACRYGT 2 cut(s) 1659, 2247
AgsI TTSAA 7 cut(s) 10, 554, 949, 1395, 1748, 1763, 1973
AjiI CACGTC 1 cut(s) 1036
AjnI CCWGG 6 cut(s) 1718, 2033, 2183, 2239, 2415, 2470
AleI CACNNNNGTG 1 cut(s) 2250
Alw21I GWGCWC 3 cut(s) 1048, 1347, 2329
Alw26I GTCTC 2 cut(s) 132, 1257
AlwI GGATC 5 cut(s) 528, 2038, 2188, 2497, 2506
Ama87I CYCGRG 2 cut(s) 1450, 2432
Aor51HI AGCGCT 1 cut(s) 52
AoxI GGCC 8 cut(s) 1016, 2081, 2181, 2204, 2242, 2270, 2435, 2540
ApaI GGGCCC 1 cut(s) 2274
ApeKI GCWGC 2 cut(s) 1074, 1378
ApoI RAATTY 5 cut(s) 368, 884, 949, 1562, 1723
ArsI GACNNNNNNTTYG 2 cut(s) 800, 832
AseI ATTAAT 2 cut(s) 974, 1967
AspLEI GCGC 1 cut(s) 53
AspS9I GGNCC 8 cut(s) 21, 233, 1875, 2181, 2204, 2270, 2271, 2435
AsuC2I CCSGG 4 cut(s) 2208, 2433, 2434, 2439
AsuHPI GGTGA 5 cut(s) 945, 1235, 1570, 1844, 2369
AvaI CYCGRG 2 cut(s) 1450, 2432
AvaII GGWCC 3 cut(s) 21, 233, 1875
AxyI CCTNAGG 1 cut(s) 2276
BaeGI GKGCMC 2 cut(s) 1124, 2274
BalI TGGCCA 1 cut(s) 2244
BanI GGYRCC 1 cut(s) 1121
BanII GRGCYC 6 cut(s) 993, 1048, 2274, 2329, 2416, 2555
BauI CACGAG 2 cut(s) 2077, 2536
BbrPI CACGTG 1 cut(s) 2248
Bbv12I GWGCWC 3 cut(s) 1048, 1347, 2329
BbvI GCAGC 2 cut(s) 1061, 1365
BccI CCATC 7 cut(s) 1018, 1514, 1950, 2071, 2114, 2304, 2347
BcgI CGANNNNNNTGC 2 cut(s) 162, 196
BciT130I CCWGG 6 cut(s) 1720, 2035, 2185, 2241, 2417, 2472
BcnI CCSGG 4 cut(s) 2208, 2433, 2434, 2439
BcoDI GTCTC 2 cut(s) 132, 1257
BfoI RGCGCY 1 cut(s) 54
BisI GCNGC 4 cut(s) 1075, 1078, 1088, 1379
BlsI GCNGC 4 cut(s) 1076, 1079, 1089, 1380
BmcAI AGTACT 1 cut(s) 1008
Bme18I GGWCC 3 cut(s) 21, 233, 1875
BmeT110I CYCGRG 2 cut(s) 1450, 2432
BmgBI CACGTC 1 cut(s) 1036
BmgT120I GGNCC 8 cut(s) 21, 233, 1875, 2181, 2204, 2270, 2271, 2435
BmiI GGNNCC 7 cut(s) 23, 1123, 2272, 2273, 2374, 2552, 2569
BmrI ACTGGG 1 cut(s) 2375
BmsI GCATC 1 cut(s) 888
BmuI ACTGGG 1 cut(s) 2375
BpmI CTGGAG 1 cut(s) 987
Bpu10I CCTNAGC 1 cut(s) 1808
BpuEI CTTGAG 1 cut(s) 1538
BpuMI CCSGG 4 cut(s) 2208, 2433, 2434, 2439
Bsa29I ATCGAT 1 cut(s) 2501
BsaAI YACGTR 1 cut(s) 2248
BsaHI GRCGYC 1 cut(s) 2265
BsaI GGTCTC 1 cut(s) 1257
BsaWI WCCGGW 2 cut(s) 18, 1580
Bse1I ACTGG 6 cut(s) 444, 696, 1004, 1247, 2336, 2370
Bse21I CCTNAGG 1 cut(s) 2276
BseBI CCWGG 6 cut(s) 1720, 2035, 2185, 2241, 2417, 2472
BseCI ATCGAT 1 cut(s) 2501
BseGI GGATG 5 cut(s) 1029, 1506, 2216, 2296, 2447
BseMII CTCAG 1 cut(s) 721
BseNI ACTGG 6 cut(s) 444, 696, 1004, 1247, 2336, 2370
BseSI GKGCMC 2 cut(s) 1124, 2274
BseXI GCAGC 2 cut(s) 1061, 1365
BshFI GGCC 8 cut(s) 1018, 2083, 2183, 2206, 2244, 2272, 2437, 2542
BshNI GGYRCC 1 cut(s) 1121
BshVI ATCGAT 1 cut(s) 2501
BsiHKAI GWGCWC 3 cut(s) 1048, 1347, 2329
BsiHKCI CYCGRG 2 cut(s) 1450, 2432
BsiSI CCGG 5 cut(s) 19, 1581, 2207, 2433, 2438
BslFI GGGAC 1 cut(s) 2104
BsmAI GTCTC 2 cut(s) 132, 1257
BsmBI CGTCTC 1 cut(s) 132
BsmFI GGGAC 1 cut(s) 2104
BsmI GAATGC 2 cut(s) 107, 2181
BsnI GGCC 8 cut(s) 1018, 2083, 2183, 2206, 2244, 2272, 2437, 2542
Bso31I GGTCTC 1 cut(s) 1257
BsoBI CYCGRG 2 cut(s) 1450, 2432
Bsp120I GGGCCC 1 cut(s) 2270
Bsp1286I GDGCHC 8 cut(s) 993, 1048, 1124, 1347, 2274, 2329, 2416, 2555
Bsp143I GATC 6 cut(s) 520, 909, 2043, 2193, 2498, 2502
Bsp19I CCATGG 1 cut(s) 848
BspACI CCGC 6 cut(s) 1077, 1087, 2179, 2197, 2382, 2428
BspANI GGCC 8 cut(s) 1018, 2083, 2183, 2206, 2244, 2272, 2437, 2542
BspCNI CTCAG 1 cut(s) 720
BspDI ATCGAT 1 cut(s) 2501
BspHI TCATGA 1 cut(s) 2145
BspLI GGNNCC 7 cut(s) 23, 1123, 2272, 2273, 2374, 2552, 2569
BspPI GGATC 5 cut(s) 528, 2038, 2188, 2497, 2506
BspQI GCTCTTC 1 cut(s) 1053
BspT107I GGYRCC 1 cut(s) 1121
BspTNI GGTCTC 1 cut(s) 1257
BsrI ACTGG 6 cut(s) 444, 696, 1004, 1247, 2336, 2370
BssMI GATC 6 cut(s) 520, 909, 2043, 2193, 2498, 2502
BssNAI GTATAC 1 cut(s) 1665
BssNI GRCGYC 1 cut(s) 2265
BssSI CACGAG 2 cut(s) 2077, 2536
BssT1I CCWWGG 3 cut(s) 848, 1019, 2200
Bst1107I GTATAC 1 cut(s) 1665
Bst2BI CACGAG 2 cut(s) 2077, 2536
Bst2UI CCWGG 6 cut(s) 1720, 2035, 2185, 2241, 2417, 2472
Bst4CI ACNGT 1 cut(s) 40
Bst6I CTCTTC 1 cut(s) 1053
BstACI GRCGYC 1 cut(s) 2265
BstBAI YACGTR 1 cut(s) 2248
BstC8I GCNNGC 4 cut(s) 49, 1356, 2181, 2412
BstDEI CTNAG 7 cut(s) 639, 707, 1556, 1705, 1790, 1808, 2276
BstDSI CCRYGG 1 cut(s) 848
BstEII GGTNACC 1 cut(s) 2357
BstENI CCTNNNNNAGG 1 cut(s) 1629
BstF5I GGATG 5 cut(s) 1029, 1506, 2216, 2296, 2447
BstH2I RGCGCY 1 cut(s) 54
BstHHI GCGC 1 cut(s) 53
BstKTI GATC 6 cut(s) 523, 912, 2046, 2196, 2501, 2505
BstMAI GTCTC 2 cut(s) 132, 1257
BstMBI GATC 6 cut(s) 520, 909, 2043, 2193, 2498, 2502
BstMWI GCNNNNNNNGC 4 cut(s) 10, 316, 1351, 1891
BstNI CCWGG 6 cut(s) 1720, 2035, 2185, 2241, 2417, 2472
BstNSI RCATGY 3 cut(s) 310, 1554, 1663
BstPI GGTNACC 1 cut(s) 2357
BstSLI GKGCMC 2 cut(s) 1124, 2274
BstV1I GCAGC 2 cut(s) 1061, 1365
BstZ17I GTATAC 1 cut(s) 1665
Bsu15I ATCGAT 1 cut(s) 2501
Bsu36I CCTNAGG 1 cut(s) 2276
BsuRI GGCC 8 cut(s) 1018, 2083, 2183, 2206, 2244, 2272, 2437, 2542
BsuTUI ATCGAT 1 cut(s) 2501
BtgI CCRYGG 1 cut(s) 848
BtgZI GCGATG 1 cut(s) 2013
BtrI CACGTC 1 cut(s) 1036
BtsCI GGATG 5 cut(s) 1029, 1506, 2216, 2296, 2447
BtsI GCAGTG 1 cut(s) 1699
BtsIMutI CAGTG 3 cut(s) 1699, 2329, 2363
Cac8I GCNNGC 4 cut(s) 49, 1356, 2181, 2412
CciI TCATGA 1 cut(s) 2145
CfoI GCGC 1 cut(s) 53
Cfr13I GGNCC 8 cut(s) 21, 233, 1875, 2181, 2204, 2270, 2271, 2435
Cfr9I CCCGGG 1 cut(s) 2432
ClaI ATCGAT 1 cut(s) 2501
CseI GACGC 1 cut(s) 722
Csp6I GTAC 2 cut(s) 1007, 1738
CspCI CAANNNNNGTGG 2 cut(s) 25, 60
CviQI GTAC 2 cut(s) 1007, 1738
DdeI CTNAG 7 cut(s) 639, 707, 1556, 1705, 1790, 1808, 2276
DpnI GATC 6 cut(s) 522, 911, 2045, 2195, 2500, 2504
DpnII GATC 6 cut(s) 520, 909, 2043, 2193, 2498, 2502
DraI TTTAAA 3 cut(s) 345, 1419, 1539
DrdI GACNNNNNNGTC 1 cut(s) 2264
DseDI GACNNNNNNGTC 1 cut(s) 2264
EaeI YGGCCR 1 cut(s) 2242
Eam1104I CTCTTC 1 cut(s) 1053
EarI CTCTTC 1 cut(s) 1053
EciI GGCGGA 1 cut(s) 2186
Ecl136II GAGCTC 2 cut(s) 1046, 2327
Eco130I CCWWGG 3 cut(s) 848, 1019, 2200
Eco147I AGGCCT 2 cut(s) 2083, 2542
Eco24I GRGCYC 6 cut(s) 993, 1048, 2274, 2329, 2416, 2555
Eco31I GGTCTC 1 cut(s) 1257
Eco47I GGWCC 3 cut(s) 21, 233, 1875
Eco47III AGCGCT 1 cut(s) 52
Eco53kI GAGCTC 2 cut(s) 1046, 2327
Eco72I CACGTG 1 cut(s) 2248
Eco81I CCTNAGG 1 cut(s) 2276
Eco88I CYCGRG 2 cut(s) 1450, 2432
Eco91I GGTNACC 1 cut(s) 2357
EcoICRI GAGCTC 2 cut(s) 1046, 2327
EcoNI CCTNNNNNAGG 1 cut(s) 1629
EcoO109I RGGNCCY 1 cut(s) 2271
EcoO65I GGTNACC 1 cut(s) 2357
EcoRI GAATTC 3 cut(s) 949, 1562, 1723
EcoRII CCWGG 6 cut(s) 1718, 2033, 2183, 2239, 2415, 2470
EcoT14I CCWWGG 3 cut(s) 848, 1019, 2200
EcoT22I ATGCAT 3 cut(s) 6, 682, 894
EcoT38I GRGCYC 6 cut(s) 993, 1048, 2274, 2329, 2416, 2555
ErhI CCWWGG 3 cut(s) 848, 1019, 2200
Esp3I CGTCTC 1 cut(s) 132
FalI AAGNNNNNCTT 2 cut(s) 1240, 1272
FaqI GGGAC 1 cut(s) 2104
FauI CCCGC 1 cut(s) 2172
FauNDI CATATG 4 cut(s) 321, 676, 933, 1730
FblI GTMKAC 2 cut(s) 1664, 2256
Fnu4HI GCNGC 4 cut(s) 1075, 1078, 1088, 1379
FokI GGATG 5 cut(s) 1036, 1493, 2223, 2283, 2454
FriOI GRGCYC 6 cut(s) 993, 1048, 2274, 2329, 2416, 2555
Fsp4HI GCNGC 4 cut(s) 1075, 1078, 1088, 1379
GlaI GCGC 1 cut(s) 52
GluI GCNGC 4 cut(s) 1075, 1078, 1088, 1379
GsuI CTGGAG 1 cut(s) 987
HaeII RGCGCY 1 cut(s) 54
HaeIII GGCC 8 cut(s) 1018, 2083, 2183, 2206, 2244, 2272, 2437, 2542
HapII CCGG 5 cut(s) 19, 1581, 2207, 2433, 2438
HgaI GACGC 1 cut(s) 722
HhaI GCGC 1 cut(s) 53
Hin1I GRCGYC 1 cut(s) 2265
Hin6I GCGC 1 cut(s) 51
HinP1I GCGC 1 cut(s) 51
HincII GTYRAC 1 cut(s) 2257
HindII GTYRAC 1 cut(s) 2257
HinfI GANTC 9 cut(s) 32, 531, 574, 654, 705, 764, 1270, 1285, 1942
HpaII CCGG 5 cut(s) 19, 1581, 2207, 2433, 2438
HphI GGTGA 5 cut(s) 945, 1235, 1570, 1844, 2369
Hpy166II GTNNAC 4 cut(s) 1657, 1665, 2257, 2425
Hpy188I TCNGA 5 cut(s) 1614, 2230, 2340, 2461, 2583
Hpy188III TCNNGA 6 cut(s) 129, 528, 1778, 1973, 2146, 2168
Hpy8I GTNNAC 4 cut(s) 1657, 1665, 2257, 2425
Hpy99I CGWCG 4 cut(s) 716, 2261, 2270, 2491
HpyAV CCTTC 7 cut(s) 1071, 1138, 1162, 1345, 1496, 2091, 2590
HpyCH4III ACNGT 1 cut(s) 40
HpyCH4IV ACGT 4 cut(s) 332, 1035, 2247, 2265
HpyF10VI GCNNNNNNNGC 4 cut(s) 10, 316, 1351, 1891
HpyF3I CTNAG 7 cut(s) 639, 707, 1556, 1705, 1790, 1808, 2276
HpySE526I ACGT 4 cut(s) 332, 1035, 2247, 2265
Hsp92I GRCGYC 1 cut(s) 2265
HspAI GCGC 1 cut(s) 51
Kzo9I GATC 6 cut(s) 520, 909, 2043, 2193, 2498, 2502
LguI GCTCTTC 1 cut(s) 1053
LmnI GCTCC 9 cut(s) 269, 1386, 1839, 1911, 1921, 2324, 2340, 2407, 2550
Lsp1109I GCAGC 2 cut(s) 1061, 1365
LweI GCATC 1 cut(s) 888
MaeII ACGT 4 cut(s) 332, 1035, 2247, 2265
MaeIII GTNAC 7 cut(s) 14, 820, 1031, 1546, 2213, 2357, 2444
MalI GATC 6 cut(s) 522, 911, 2045, 2195, 2500, 2504
MboI GATC 6 cut(s) 520, 909, 2043, 2193, 2498, 2502
MboII GAAGA 6 cut(s) 649, 1040, 1043, 1657, 1972, 1994
MfeI CAATTG 3 cut(s) 237, 549, 1879
MhlI GDGCHC 8 cut(s) 993, 1048, 1124, 1347, 2274, 2329, 2416, 2555
MlsI TGGCCA 1 cut(s) 2244
MluNI TGGCCA 1 cut(s) 2244
MlyI GAGTC 3 cut(s) 525, 568, 699
MmeI TCCRAC 4 cut(s) 372, 438, 498, 1889
Mox20I TGGCCA 1 cut(s) 2244
Mph1103I ATGCAT 3 cut(s) 6, 682, 894
MscI TGGCCA 1 cut(s) 2244
MslI CAYNNNNRTG 4 cut(s) 144, 1539, 1847, 2250
Msp20I TGGCCA 1 cut(s) 2244
MspA1I CMGCKG 1 cut(s) 1267
MspI CCGG 5 cut(s) 19, 1581, 2207, 2433, 2438
MunI CAATTG 3 cut(s) 237, 549, 1879
Mva1269I GAATGC 2 cut(s) 107, 2181
MvaI CCWGG 6 cut(s) 1720, 2035, 2185, 2241, 2417, 2472
MwoI GCNNNNNNNGC 4 cut(s) 10, 316, 1351, 1891
NciI CCSGG 4 cut(s) 2208, 2433, 2434, 2439
NcoI CCATGG 1 cut(s) 848
NdeI CATATG 4 cut(s) 321, 676, 933, 1730
NdeII GATC 6 cut(s) 520, 909, 2043, 2193, 2498, 2502
NlaIV GGNNCC 7 cut(s) 23, 1123, 2272, 2273, 2374, 2552, 2569
NmeAIII GCCGAG 1 cut(s) 83
NmuCI GTSAC 5 cut(s) 14, 1031, 2213, 2357, 2444
NsiI ATGCAT 3 cut(s) 6, 682, 894
NspI RCATGY 3 cut(s) 310, 1554, 1663
OliI CACNNNNGTG 1 cut(s) 2250
PagI TCATGA 1 cut(s) 2145
PasI CCCWGGG 1 cut(s) 2034
PceI AGGCCT 2 cut(s) 2083, 2542
PciI ACATGT 1 cut(s) 1659
PciSI GCTCTTC 1 cut(s) 1053
PcsI WCGNNNNNNNCGW 2 cut(s) 2253, 2262
PctI GAATGC 2 cut(s) 107, 2181
PfeI GAWTC 6 cut(s) 32, 654, 764, 1270, 1285, 1942
PkrI GCNGC 4 cut(s) 1076, 1079, 1089, 1380
PleI GAGTC 3 cut(s) 525, 568, 699
PmaCI CACGTG 1 cut(s) 2248
PmlI CACGTG 1 cut(s) 2248
PpsI GAGTC 3 cut(s) 525, 568, 699
Ppu21I YACGTR 1 cut(s) 2248
PscI ACATGT 1 cut(s) 1659
PshBI ATTAAT 2 cut(s) 974, 1967
PsiI TTATAA 1 cut(s) 1686
Psp124BI GAGCTC 2 cut(s) 1048, 2329
Psp6I CCWGG 6 cut(s) 1718, 2033, 2183, 2239, 2415, 2470
PspCI CACGTG 1 cut(s) 2248
PspEI GGTNACC 1 cut(s) 2357
PspGI CCWGG 6 cut(s) 1718, 2033, 2183, 2239, 2415, 2470
PspN4I GGNNCC 7 cut(s) 23, 1123, 2272, 2273, 2374, 2552, 2569
PspOMI GGGCCC 1 cut(s) 2270
PspPI GGNCC 8 cut(s) 21, 233, 1875, 2181, 2204, 2270, 2271, 2435
PsrI GAACNNNNNNTAC 2 cut(s) 508, 540
PvuII CAGCTG 1 cut(s) 1267
RsaI GTAC 2 cut(s) 1008, 1739
RsaNI GTAC 2 cut(s) 1007, 1738
RseI CAYNNNNRTG 4 cut(s) 144, 1539, 1847, 2250
SacI GAGCTC 2 cut(s) 1048, 2329
SalI GTCGAC 1 cut(s) 2255
SapI GCTCTTC 1 cut(s) 1053
SatI GCNGC 4 cut(s) 1075, 1078, 1088, 1379
Sau3AI GATC 6 cut(s) 520, 909, 2043, 2193, 2498, 2502
Sau96I GGNCC 8 cut(s) 21, 233, 1875, 2181, 2204, 2270, 2271, 2435
ScaI AGTACT 1 cut(s) 1008
SchI GAGTC 3 cut(s) 525, 568, 699
SduI GDGCHC 8 cut(s) 993, 1048, 1124, 1347, 2274, 2329, 2416, 2555
SfaNI GCATC 1 cut(s) 888
SinI GGWCC 3 cut(s) 21, 233, 1875
SmaI CCCGGG 1 cut(s) 2434
SmiI ATTTAAAT 1 cut(s) 1539
SmiMI CAYNNNNRTG 4 cut(s) 144, 1539, 1847, 2250
SmlI CTYRAG 1 cut(s) 1517
SmoI CTYRAG 1 cut(s) 1517
SseBI AGGCCT 2 cut(s) 2083, 2542
SsiI CCGC 6 cut(s) 1077, 1087, 2179, 2197, 2382, 2428
SstI GAGCTC 2 cut(s) 1048, 2329
StuI AGGCCT 2 cut(s) 2083, 2542
StyI CCWWGG 3 cut(s) 848, 1019, 2200
SwaI ATTTAAAT 1 cut(s) 1539
TaaI ACNGT 1 cut(s) 40
TaiI ACGT 4 cut(s) 335, 1038, 2250, 2268
TaqI TCGA 3 cut(s) 130, 2256, 2501
TatI WGTACW 1 cut(s) 1006
TauI GCSGC 2 cut(s) 1080, 1090
TfiI GAWTC 6 cut(s) 32, 654, 764, 1270, 1285, 1942
TscAI CASTG 3 cut(s) 1706, 2336, 2370
TseFI GTSAC 5 cut(s) 14, 1031, 2213, 2357, 2444
TseI GCWGC 2 cut(s) 1074, 1378
Tsp45I GTSAC 5 cut(s) 14, 1031, 2213, 2357, 2444
TspDTI ATGAA 7 cut(s) 684, 756, 762, 806, 842, 1523, 1589
TspMI CCCGGG 1 cut(s) 2432
TspRI CASTG 3 cut(s) 1706, 2336, 2370
VpaK11BI GGWCC 3 cut(s) 21, 233, 1875
VspI ATTAAT 2 cut(s) 974, 1967
XagI CCTNNNNNAGG 1 cut(s) 1629
XapI RAATTY 5 cut(s) 368, 884, 949, 1562, 1723
XbaI TCTAGA 1 cut(s) 527
XceI RCATGY 3 cut(s) 310, 1554, 1663
XcmI CCANNNNNNNNNTGG 1 cut(s) 1011
XmaI CCCGGG 1 cut(s) 2432
XmiI GTMKAC 2 cut(s) 1664, 2256
ZraI GACGTC 1 cut(s) 2266
ZrmI AGTACT 1 cut(s) 1008
Zsp2I ATGCAT 3 cut(s) 6, 682, 894
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.