pycom03g19120

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0000158
Physical Location & Seq
Forward (+)
19841046 .. 19843655
2610 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g19120.8

Sequence Viewer

Length: 1824 bp
ATGAGATCATATATACCAGCTGCAAATGTGCCTGCAAAGATGTGTACCAAATGTAGGATGGACCTTCGTCCCGAAAGCATGAACGCCATTACTGTGTACGCAACTTCTCACTTTTCTCTTTTAGCTATGGGCTCTTGTCCCACCTTGGGTTTTTCCATAACGAGGTTTTGTGAGTTTTACGACTCATGCATTCTTTTGTTTGTTTTGAGACTCGCATTCGCTACTTCTGATGGGCTATCTACTTTAGTATTTGCACACTCAAGGGAAAGTGTTGTGACATATATTAAGAATCCATTGGGATCTAGAATATCTTTCCTAATAGACTTTGTATTGCTTGGAGAGCAAGTTTCTCTCCTCCTTATTACTATAAATAAAGTCTCCACCCTTTTTCTCTCCATGCCACACCCCTTAGTTAAATATAGGCTACAACAACAGACTCTGCAGTTTGCAAGTCATGTCGCACCAAATTCGCATCACACTGAGAGTAAGAAGCCGTCGTGCGCAGGGTCTGTGCAGCAGCAGAAGAATAAAAGGCTGTTATTGACAAGTTTTTCGACTGACCAGAAGGGCGGCTACTCTTTCCTGGCCTTTATTTACGGTGAGTGGAGGGGCGGTCGCCCCTCCTTGCACCTATGTAGCTTTGCCAGTGATGCTAAGGTTGTCTTATACTCCCACTACTCAAAAGCTCCCTTACTGGGAGCAGGGACTATAACCTTGTATATATTGCTAGGGTTTGTACGCAACTATTCTATCATGATTCAATATCTCTGTAATGAATCCCTTAAGGATTCCCACAAGTTAGTTGCATGGTTAAGACTTCATAATGGAGAAACTAGTCCTTTTCAATTGTTAATCAAGGTTCCAAGACAATTAAAATTTATTTCTAAACATATTCATTTTGTAACATCTCACATCCACGAGGCTTTTTGGGAGCTCACTGGCTTCGGAGTTCATCGAAACTTCGAAGTTAAGCGAGTAGCACGTGAGAGCAATCCCATGATGGGTGACCCACTGGGATGTTCTCGTGTGAATCGTGCTGCGGTGGTGAAGCGAGCCTGGGATGTGGTAGACCCCGGGCCGGGATGTGACAATTTGGTATCAGAGCCAATCTCTGGTCGGATGTGTGCCGACGAGGACGTTGGGCCCCTAAGGGGGTGGATTGTAACATCCCACATCGCCCAAGGGAGTGGATCCTGTAAGCCTTATATGTATATTCCCATCTTTACCTATAGCATGCGAAAACAATCCCATGGGCCAATCTCTGGCCGGATGTGTGCCGACGAGGATGTTGGGCCCCTAAAGGGGTGGATTGTAACATCCCACATCCACGAGGCTTTTTGGGAGCTCACTGGCTTCGGAGTTCATCGGAACTCCGAAGTTAAGCGAGTAGTATGCGAAAGCAATCCCATGATGGGTGACCCACTGGGAAGTTCTCGTGTGAGTTCCCAGAAACAAAACCGTGTGGGTTTGAGCTTGGGATGTGGTGGGGGCCCGGGCCGGGATGTGACACATTTAATGTTAAAAACATTACATTTGATATATTTATATTTATGGCTAAATTTATATCATATATTTTTATTTTTGTTTTTCCTTTTCAGTTTTAGTTCGTACCCATATATTAATTTATTTTTGCGTCCATATTTTTCAAACTTTTATTTGTACTCATTTTTTTTTTTACCATTTATTAGTACCCATAATTTATTAGTAATGTACCCATTTGTCTTTAAAAATTTACCACTTTGTTATATTTTTCTTTTTTATAAAATGTATCACCTTTTTTGTATAAAATTTACCAACTTTTTGTATGTAAAATGTAGCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

608

Amino Acids

68.94

Weight (kDa)

9.32

Isoelectric Point (pI)

42.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1761
Acc16I TGCGCA 1 cut(s) 502
AccB7I CCANNNNNTGG 2 cut(s) 1112, 1262
AccI GTMKAC 1 cut(s) 1068
AciI CCGC 3 cut(s) 570, 612, 1040
AclWI GGATC 3 cut(s) 307, 1185, 1198
AcoI YGGCCR 1 cut(s) 1264
AcsI RAATTY 5 cut(s) 466, 875, 1558, 1729, 1787
AcvI CACGTG 1 cut(s) 983
AfaI GTAC 7 cut(s) 46, 98, 738, 1610, 1661, 1690, 1712
AflII CTTAAG 1 cut(s) 782
AgsI TTSAA 3 cut(s) 761, 845, 1647
AhlI ACTAGT 1 cut(s) 833
AjnI CCWGG 2 cut(s) 582, 1055
AluBI AGCT 7 cut(s) 20, 125, 639, 686, 934, 1345, 1473
AluI AGCT 7 cut(s) 20, 125, 639, 686, 934, 1345, 1473
Alw21I GWGCWC 2 cut(s) 936, 1347
Alw26I GTCTC 2 cut(s) 202, 382
AlwI GGATC 3 cut(s) 307, 1185, 1198
AlwNI CAGNNNCTG 2 cut(s) 439, 509
Ama87I CYCGRG 2 cut(s) 1073, 1492
AoxI GGCC 8 cut(s) 585, 1076, 1142, 1253, 1264, 1292, 1489, 1495
ApaI GGGCCC 3 cut(s) 1146, 1296, 1493
ApeKI GCWGC 4 cut(s) 20, 514, 517, 1037
ApoI RAATTY 5 cut(s) 466, 875, 1558, 1729, 1787
ArsI GACNNNNNNTTYG 2 cut(s) 535, 567
AseI ATTAAT 1 cut(s) 1620
AspLEI GCGC 1 cut(s) 503
AsuC2I CCSGG 6 cut(s) 1074, 1075, 1080, 1493, 1494, 1499
AsuHPI GGTGA 5 cut(s) 611, 1016, 1057, 1427, 1763
AsuII TTCGAA 1 cut(s) 963
AvaI CYCGRG 2 cut(s) 1073, 1492
AvaII GGWCC 1 cut(s) 61
AxyI CCTNAGG 1 cut(s) 1148
BaeGI GKGCMC 3 cut(s) 1146, 1296, 1493
BamHI GGATCC 1 cut(s) 1190
BanII GRGCYC 6 cut(s) 134, 936, 1146, 1296, 1347, 1493
BarI GAAGNNNNNNTAC 2 cut(s) 557, 589
BauI CACGAG 4 cut(s) 917, 1023, 1328, 1434
BbrPI CACGTG 1 cut(s) 983
Bbv12I GWGCWC 2 cut(s) 936, 1347
BbvI GCAGC 4 cut(s) 7, 526, 529, 1024
BccI CCATC 5 cut(s) 52, 224, 994, 1226, 1405
BceAI ACGGC 1 cut(s) 478
BcgI CGANNNNNNTGC 4 cut(s) 450, 484, 1374, 1408
BciT130I CCWGG 2 cut(s) 584, 1057
BcnI CCSGG 6 cut(s) 1074, 1075, 1080, 1493, 1494, 1499
BcoDI GTCTC 2 cut(s) 202, 382
BcuI ACTAGT 1 cut(s) 833
BfaI CTAG 3 cut(s) 303, 728, 834
BfmI CTRYAG 2 cut(s) 440, 1228
BfrI CTTAAG 1 cut(s) 782
BisI GCNGC 5 cut(s) 21, 515, 518, 571, 1038
BlsI GCNGC 5 cut(s) 22, 516, 519, 572, 1039
Bme1390I CCNGG 8 cut(s) 584, 1057, 1074, 1075, 1080, 1493, 1494, 1499
Bme18I GGWCC 1 cut(s) 61
BmeT110I CYCGRG 2 cut(s) 1073, 1492
BmiI GGNNCC 8 cut(s) 861, 1144, 1145, 1192, 1294, 1295, 1490, 1491
BmrFI CCNGG 8 cut(s) 584, 1057, 1074, 1075, 1080, 1493, 1494, 1499
BmrI ACTGGG 3 cut(s) 704, 1022, 1433
BmsI GCATC 2 cut(s) 481, 640
BmuI ACTGGG 3 cut(s) 704, 1022, 1433
BoxI GACNNNNGTC 1 cut(s) 66
BplI GAGNNNNNCTC 2 cut(s) 1094, 1126
Bpu10I CCTNAGC 1 cut(s) 654
Bpu14I TTCGAA 1 cut(s) 963
BpuEI CTTGAG 1 cut(s) 244
BpuMI CCSGG 6 cut(s) 1074, 1075, 1080, 1493, 1494, 1499
BsaAI YACGTR 1 cut(s) 983
BsaJI CCNNGG 7 cut(s) 144, 1056, 1072, 1073, 1180, 1249, 1492
BsaXI ACNNNNNCTCC 4 cut(s) 330, 360, 598, 628
Bse1I ACTGG 6 cut(s) 645, 699, 943, 1017, 1354, 1428
Bse21I CCTNAGG 1 cut(s) 1148
BseBI CCWGG 2 cut(s) 584, 1057
BseDI CCNNGG 7 cut(s) 144, 1056, 1072, 1073, 1180, 1249, 1492
BseMII CTCAG 1 cut(s) 471
BseNI ACTGG 6 cut(s) 645, 699, 943, 1017, 1354, 1428
BseRI GAGGAG 1 cut(s) 344
BseSI GKGCMC 3 cut(s) 1146, 1296, 1493
BseXI GCAGC 4 cut(s) 7, 526, 529, 1024
BsgI GTGCAG 1 cut(s) 533
Bsh1285I CGRYCG 1 cut(s) 616
BshFI GGCC 8 cut(s) 587, 1078, 1144, 1255, 1266, 1294, 1491, 1497
BsiEI CGRYCG 1 cut(s) 616
BsiHKAI GWGCWC 2 cut(s) 936, 1347
BsiHKCI CYCGRG 2 cut(s) 1073, 1492
BsiSI CCGG 5 cut(s) 1074, 1079, 1267, 1493, 1498
BslFI GGGAC 3 cut(s) 54, 123, 718
BsmAI GTCTC 2 cut(s) 202, 382
BsmFI GGGAC 3 cut(s) 54, 123, 718
BsmI GAATGC 2 cut(s) 189, 215
BsnI GGCC 8 cut(s) 587, 1078, 1144, 1255, 1266, 1294, 1491, 1497
BsoBI CYCGRG 2 cut(s) 1073, 1492
Bsp119I TTCGAA 1 cut(s) 963
Bsp120I GGGCCC 3 cut(s) 1142, 1292, 1489
Bsp1286I GDGCHC 6 cut(s) 134, 936, 1146, 1296, 1347, 1493
Bsp143I GATC 3 cut(s) 5, 299, 1190
Bsp19I CCATGG 1 cut(s) 1249
BspACI CCGC 3 cut(s) 570, 612, 1040
BspANI GGCC 8 cut(s) 587, 1078, 1144, 1255, 1266, 1294, 1491, 1497
BspCNI CTCAG 1 cut(s) 472
BspHI TCATGA 1 cut(s) 753
BspLI GGNNCC 8 cut(s) 861, 1144, 1145, 1192, 1294, 1295, 1490, 1491
BspMAI CTGCAG 1 cut(s) 444
BspPI GGATC 3 cut(s) 307, 1185, 1198
BspT104I TTCGAA 1 cut(s) 963
BspTI CTTAAG 1 cut(s) 782
BsrI ACTGG 6 cut(s) 645, 699, 943, 1017, 1354, 1428
BssECI CCNNGG 7 cut(s) 144, 1056, 1072, 1073, 1180, 1249, 1492
BssMI GATC 3 cut(s) 5, 299, 1190
BssSI CACGAG 4 cut(s) 917, 1023, 1328, 1434
BssT1I CCWWGG 3 cut(s) 144, 1180, 1249
Bst2BI CACGAG 4 cut(s) 917, 1023, 1328, 1434
Bst2UI CCWGG 2 cut(s) 584, 1057
Bst4CI ACNGT 3 cut(s) 94, 599, 1460
BstAFI CTTAAG 1 cut(s) 782
BstBAI YACGTR 1 cut(s) 983
BstBI TTCGAA 1 cut(s) 963
BstC8I GCNNGC 3 cut(s) 33, 1053, 1235
BstDEI CTNAG 4 cut(s) 409, 480, 654, 1148
BstDSI CCRYGG 1 cut(s) 1249
BstEII GGTNACC 2 cut(s) 1004, 1415
BstHHI GCGC 1 cut(s) 503
BstKTI GATC 3 cut(s) 8, 302, 1193
BstMAI GTCTC 2 cut(s) 202, 382
BstMBI GATC 3 cut(s) 5, 299, 1190
BstMCI CGRYCG 1 cut(s) 616
BstMWI GCNNNNNNNGC 2 cut(s) 340, 650
BstNI CCWGG 2 cut(s) 584, 1057
BstNSI RCATGY 1 cut(s) 1237
BstPAI GACNNNNGTC 1 cut(s) 66
BstPI GGTNACC 2 cut(s) 1004, 1415
BstSCI CCNGG 8 cut(s) 582, 1055, 1072, 1073, 1078, 1491, 1492, 1497
BstSFI CTRYAG 2 cut(s) 440, 1228
BstSLI GKGCMC 3 cut(s) 1146, 1296, 1493
BstV1I GCAGC 4 cut(s) 7, 526, 529, 1024
BstX2I RGATCY 2 cut(s) 299, 1190
BstXI CCANNNNNNTGG 1 cut(s) 1187
BstYI RGATCY 2 cut(s) 299, 1190
Bsu36I CCTNAGG 1 cut(s) 1148
BsuRI GGCC 8 cut(s) 587, 1078, 1144, 1255, 1266, 1294, 1491, 1497
BtgI CCRYGG 1 cut(s) 1249
BtgZI GCGATG 1 cut(s) 1159
BtsIMutI CAGTG 6 cut(s) 477, 652, 936, 1010, 1347, 1421
Cac8I GCNNGC 3 cut(s) 33, 1053, 1235
CaiI CAGNNNCTG 2 cut(s) 439, 509
CciI TCATGA 1 cut(s) 753
CfoI GCGC 1 cut(s) 503
Cfr9I CCCGGG 2 cut(s) 1073, 1492
CseI GACGC 1 cut(s) 1622
Csp6I GTAC 7 cut(s) 45, 97, 737, 1609, 1660, 1689, 1711
CviQI GTAC 7 cut(s) 45, 97, 737, 1609, 1660, 1689, 1711
DdeI CTNAG 4 cut(s) 409, 480, 654, 1148
DpnI GATC 3 cut(s) 7, 301, 1192
DpnII GATC 3 cut(s) 5, 299, 1190
DraI TTTAAA 1 cut(s) 1726
EaeI YGGCCR 1 cut(s) 1264
Ecl136II GAGCTC 2 cut(s) 934, 1345
Eco130I CCWWGG 3 cut(s) 144, 1180, 1249
Eco24I GRGCYC 6 cut(s) 134, 936, 1146, 1296, 1347, 1493
Eco47I GGWCC 1 cut(s) 61
Eco53kI GAGCTC 2 cut(s) 934, 1345
Eco72I CACGTG 1 cut(s) 983
Eco81I CCTNAGG 1 cut(s) 1148
Eco88I CYCGRG 2 cut(s) 1073, 1492
Eco91I GGTNACC 2 cut(s) 1004, 1415
EcoICRI GAGCTC 2 cut(s) 934, 1345
EcoO109I RGGNCCY 3 cut(s) 1143, 1293, 1489
EcoO65I GGTNACC 2 cut(s) 1004, 1415
EcoRII CCWGG 2 cut(s) 582, 1055
EcoT14I CCWWGG 3 cut(s) 144, 1180, 1249
EcoT22I ATGCAT 1 cut(s) 191
EcoT38I GRGCYC 6 cut(s) 134, 936, 1146, 1296, 1347, 1493
ErhI CCWWGG 3 cut(s) 144, 1180, 1249
FalI AAGNNNNNCTT 2 cut(s) 647, 679
FaqI GGGAC 3 cut(s) 54, 123, 718
FblI GTMKAC 1 cut(s) 1068
Fnu4HI GCNGC 5 cut(s) 21, 515, 518, 571, 1038
FriOI GRGCYC 6 cut(s) 134, 936, 1146, 1296, 1347, 1493
Fsp4HI GCNGC 5 cut(s) 21, 515, 518, 571, 1038
FspBI CTAG 3 cut(s) 303, 728, 834
FspI TGCGCA 1 cut(s) 502
GlaI GCGC 1 cut(s) 502
GluI GCNGC 5 cut(s) 21, 515, 518, 571, 1038
HaeIII GGCC 8 cut(s) 587, 1078, 1144, 1255, 1266, 1294, 1491, 1497
HapII CCGG 5 cut(s) 1074, 1079, 1267, 1493, 1498
HgaI GACGC 1 cut(s) 1622
HhaI GCGC 1 cut(s) 503
Hin6I GCGC 1 cut(s) 501
HinP1I GCGC 1 cut(s) 501
HinfI GANTC 8 cut(s) 182, 210, 289, 436, 757, 776, 788, 1030
HpaII CCGG 5 cut(s) 1074, 1079, 1267, 1493, 1498
HphI GGTGA 5 cut(s) 611, 1016, 1057, 1427, 1763
Hpy166II GTNNAC 3 cut(s) 45, 97, 1069
Hpy188I TCNGA 7 cut(s) 229, 947, 1102, 1119, 1358, 1368, 1375
Hpy188III TCNNGA 3 cut(s) 71, 303, 754
Hpy8I GTNNAC 3 cut(s) 45, 97, 1069
Hpy99I CGWCG 3 cut(s) 499, 1133, 1283
HpyAV CCTTC 2 cut(s) 74, 559
HpyCH4III ACNGT 3 cut(s) 94, 599, 1460
HpyCH4IV ACGT 2 cut(s) 982, 1137
HpyCH4V TGCA 9 cut(s) 23, 35, 189, 254, 442, 449, 514, 628, 806
HpyF10VI GCNNNNNNNGC 2 cut(s) 340, 650
HpyF3I CTNAG 4 cut(s) 409, 480, 654, 1148
HpySE526I ACGT 2 cut(s) 982, 1137
HspAI GCGC 1 cut(s) 501
Kzo9I GATC 3 cut(s) 5, 299, 1190
LmnI GCTCC 4 cut(s) 691, 698, 931, 1342
Lsp1109I GCAGC 4 cut(s) 7, 526, 529, 1024
LweI GCATC 2 cut(s) 481, 640
MaeI CTAG 3 cut(s) 303, 728, 834
MaeII ACGT 2 cut(s) 982, 1137
MaeIII GTNAC 8 cut(s) 274, 901, 1004, 1085, 1162, 1312, 1415, 1504
MalI GATC 3 cut(s) 7, 301, 1192
MboI GATC 3 cut(s) 5, 299, 1190
MboII GAAGA 1 cut(s) 535
MfeI CAATTG 1 cut(s) 845
MflI RGATCY 2 cut(s) 299, 1190
MhlI GDGCHC 6 cut(s) 134, 936, 1146, 1296, 1347, 1493
MlyI GAGTC 3 cut(s) 176, 204, 430
MmeI TCCRAC 1 cut(s) 1097
MnlI CCTC 8 cut(s) 156, 365, 600, 631, 913, 1126, 1276, 1324
Mph1103I ATGCAT 1 cut(s) 191
MslI CAYNNNNRTG 2 cut(s) 92, 1015
MspA1I CMGCKG 1 cut(s) 20
MspCI CTTAAG 1 cut(s) 782
MspI CCGG 5 cut(s) 1074, 1079, 1267, 1493, 1498
MspR9I CCNGG 8 cut(s) 584, 1057, 1074, 1075, 1080, 1493, 1494, 1499
MunI CAATTG 1 cut(s) 845
Mva1269I GAATGC 2 cut(s) 189, 215
MvaI CCWGG 2 cut(s) 584, 1057
MwoI GCNNNNNNNGC 2 cut(s) 340, 650
NciI CCSGG 6 cut(s) 1074, 1075, 1080, 1493, 1494, 1499
NcoI CCATGG 1 cut(s) 1249
NdeII GATC 3 cut(s) 5, 299, 1190
NlaIV GGNNCC 8 cut(s) 861, 1144, 1145, 1192, 1294, 1295, 1490, 1491
NmuCI GTSAC 5 cut(s) 274, 1004, 1085, 1415, 1504
NsbI TGCGCA 1 cut(s) 502
NsiI ATGCAT 1 cut(s) 191
NspI RCATGY 1 cut(s) 1237
NspV TTCGAA 1 cut(s) 963
PaeI GCATGC 1 cut(s) 1237
PagI TCATGA 1 cut(s) 753
PcsI WCGNNNNNNNCGW 1 cut(s) 1030
PctI GAATGC 2 cut(s) 189, 215
PfeI GAWTC 5 cut(s) 289, 757, 776, 788, 1030
PflMI CCANNNNNTGG 2 cut(s) 1112, 1262
PkrI GCNGC 5 cut(s) 22, 516, 519, 572, 1039
PleI GAGTC 3 cut(s) 176, 204, 430
PmaCI CACGTG 1 cut(s) 983
PmlI CACGTG 1 cut(s) 983
PpsI GAGTC 3 cut(s) 176, 204, 430
Ppu21I YACGTR 1 cut(s) 983
PshAI GACNNNNGTC 1 cut(s) 66
PshBI ATTAAT 1 cut(s) 1620
PsiI TTATAA 1 cut(s) 1761
Psp124BI GAGCTC 2 cut(s) 936, 1347
Psp6I CCWGG 2 cut(s) 582, 1055
PspCI CACGTG 1 cut(s) 983
PspEI GGTNACC 2 cut(s) 1004, 1415
PspGI CCWGG 2 cut(s) 582, 1055
PspN4I GGNNCC 8 cut(s) 861, 1144, 1145, 1192, 1294, 1295, 1490, 1491
PspOMI GGGCCC 3 cut(s) 1142, 1292, 1489
PstI CTGCAG 1 cut(s) 444
PstNI CAGNNNCTG 2 cut(s) 439, 509
PsuI RGATCY 2 cut(s) 299, 1190
PvuII CAGCTG 1 cut(s) 20
RsaI GTAC 7 cut(s) 46, 98, 738, 1610, 1661, 1690, 1712
RsaNI GTAC 7 cut(s) 45, 97, 737, 1609, 1660, 1689, 1711
RseI CAYNNNNRTG 2 cut(s) 92, 1015
SacI GAGCTC 2 cut(s) 936, 1347
SatI GCNGC 5 cut(s) 21, 515, 518, 571, 1038
Sau3AI GATC 3 cut(s) 5, 299, 1190
SchI GAGTC 3 cut(s) 176, 204, 430
ScrFI CCNGG 8 cut(s) 584, 1057, 1074, 1075, 1080, 1493, 1494, 1499
SduI GDGCHC 6 cut(s) 134, 936, 1146, 1296, 1347, 1493
SfaNI GCATC 2 cut(s) 481, 640
SfcI CTRYAG 2 cut(s) 440, 1228
SfuI TTCGAA 1 cut(s) 963
SinI GGWCC 1 cut(s) 61
SmaI CCCGGG 2 cut(s) 1075, 1494
SmiMI CAYNNNNRTG 2 cut(s) 92, 1015
SmlI CTYRAG 2 cut(s) 259, 782
SmoI CTYRAG 2 cut(s) 259, 782
SpeI ACTAGT 1 cut(s) 833
SphI GCATGC 1 cut(s) 1237
SrfI GCCCGGGC 1 cut(s) 1494
SsiI CCGC 3 cut(s) 570, 612, 1040
SspMI CTAG 3 cut(s) 303, 728, 834
SstI GAGCTC 2 cut(s) 936, 1347
StyD4I CCNGG 8 cut(s) 582, 1055, 1072, 1073, 1078, 1491, 1492, 1497
StyI CCWWGG 3 cut(s) 144, 1180, 1249
TaaI ACNGT 3 cut(s) 94, 599, 1460
TaiI ACGT 2 cut(s) 985, 1140
TaqI TCGA 3 cut(s) 554, 955, 963
TatI WGTACW 1 cut(s) 1659
TauI GCSGC 1 cut(s) 573
TfiI GAWTC 5 cut(s) 289, 757, 776, 788, 1030
TscAI CASTG 6 cut(s) 484, 652, 943, 1017, 1354, 1428
TseFI GTSAC 5 cut(s) 274, 1004, 1085, 1415, 1504
TseI GCWGC 4 cut(s) 20, 514, 517, 1037
Tsp45I GTSAC 5 cut(s) 274, 1004, 1085, 1415, 1504
TspDTI ATGAA 6 cut(s) 95, 789, 809, 884, 941, 1352
TspMI CCCGGG 2 cut(s) 1073, 1492
TspRI CASTG 6 cut(s) 484, 652, 943, 1017, 1354, 1428
Van91I CCANNNNNTGG 2 cut(s) 1112, 1262
Vha464I CTTAAG 1 cut(s) 782
VpaK11BI GGWCC 1 cut(s) 61
VspI ATTAAT 1 cut(s) 1620
XapI RAATTY 5 cut(s) 466, 875, 1558, 1729, 1787
XbaI TCTAGA 1 cut(s) 302
XceI RCATGY 1 cut(s) 1237
XcmI CCANNNNNNNNNTGG 1 cut(s) 55
XmaI CCCGGG 2 cut(s) 1073, 1492
XmiI GTMKAC 1 cut(s) 1068
XspI CTAG 3 cut(s) 303, 728, 834
Zsp2I ATGCAT 1 cut(s) 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.