pycom17g01940

Golgin candidate

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
1226393 .. 1232464
6072 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g01940.8

Sequence Viewer

Length: 2586 bp
ATGCTCGAGCTTCAGTCTGTTGTGGCAGAAACCTCTGCTGCCCAACTAGCATTTGGAGCAATGGGATTTCCTGTTATGATGGGCATATTAAAGGAAGAACGGGATGATGTTGAAATGGTCCGAGGTGCCCTAGAAACTCTTGTGAGTGCCTTGACTCCTATTGACCATGCAAAAGGCCCAAAGAATGAGATTCAACCAGCTATAATGAACACTGATTTGCTTTCCAGGGAAGCAGACAGCATTTCGCTTCTTCTAAGTTTGTTGGTGAGAGACTGTATTGAATTGTTGAACAATCTTATTCGGAACACTGCATCTAATCAGATACTACTGAGGGAGACAATGGGATTTGACCCCTTATTGTCAATTTTGAAGCTACGAGGGAGTACTTACAGTTTCACTCAACAAAAGACAATTAATCTACTCAGTGCGTTGGAAACTCTTAATTTGCTAATAATGGGAGGGTCGGAGGCTGATCCTGGAAAAGATGCAAATAAGCTAACAAATAGAACCACCCTCGTTCAGAAAAAAGTCTTGGACCATCTTCTAATGCTGGGTGTGGAAAGCCAGTGGGCTCCTGTTGCTGTCCGTTGTTCAGCGCTGCAATGCATTGGTAATCTGATTGCTGGACATCCCAAGAATCTTGATGCGCTTGCAAGCAAATTTCTTGGAGAGGGGCCACAGGAACCTGCTTTGAACTCGATTCTTCGAATCATATTGCGGACATCCAGTATGCAAGAATTTGTTGCAGCAGATTATGTTTTTAAGAGATTTTGTGAGGTTGACATTGTGTATATGCTTCTTATAGTGCAGACATGCTGCAGAGCTGCTAGTGTTCTTTCTCATGTAATGAAGGACAATCTCCAGTGCAAGGAAAGGGTGTTGCGTATTGAACTTGAGGCACCTACTCCATCTCTAGGTGCACCAGAGCCTCTAATGCACCGTGTGGTAAAATACTTAGCCATTACCTCTTCCATGCAAAACAAAGATGGAAAGTCAAGTGGAAACTCATATGTTCAACCAGTTATCTTGAAATTGCTTGTCACTTGGCTAGCTGATTGCCCTAGCGCTGTGAATTGCTTCCTAGATTCACGTCCCCACGTCACTTATCTGCTTGAGTTGGTCTCCAATTCAACTGCTACAGTGTACATAAAGGGGTTGGCAGCTGTTCTTCTGGGAGAGTGTGTGATCTACAACAAATCAGTTGAAAGTGAGAAGGACGCCTTTACTATAGTTGATTCCATCAGCCAGAAGGTTAGGCTCACGTCATATTTTCTGAAGTTCGATGAGATGCAGAAAAGCTTCCTTTTCACCTCTTCAAAATCGGCTGAGCCCCGCAAAGAATTAACCAGATCCACTTCTGCTAGTATGGTAGATGTTGATGAGAGCGATCTCTCTGATCAGAAAACCGAGTATCATCCGGTTCTCTCCTCAATCTTTGATGCTCCATTTCTAAACTTAGTCAAGAGTTTGGAGGCAAACATCAGAGAAAAAATCGTTGAGGTGTACAGTCAACCGAAGAGCAAGGTGGCAGTGGTGCCAGCAGAACTGGAACAGAAAAGTGGGGAAAGTGATGGAGAGTATATAAAGCGGCTGAAAGCATTTGTGGAGAAGCAATGCTCGGAGATACAGGACCTACTCGGCCGCAATGCAAGTTTGGCTGAGCATGTGGCAACGATCGGTGGGGGAAGTTCCAGGTCTGAGCAGGGTGCGGGCTCAGATAGAGTCCAGGTAGAGACACTCAGGCGAGATTTTCAAGAAGCATCTAAACGGTTGGAGTTGCTCAAGGCAGAGAAAGCCAAGCTTGAATCTGAGGCATCCATGTATAAAAACTTAGCCGGAAAGATGGAATCTGATCTAAAGAGCTTATCCGATGCTTACAACAGTCTTGAGCAGGCGAATTTCCATCTAGAGAAGGAGGTCAGAGCTAAGAATGGTGGAGGAGGGTCTTCGTCCATTCCCGATGTGGATGCAATTAGAGCCGAGGCGAGGGAAGAAGCTCAGAAGGAGAGCGAGGCAGAACTGAATGATCTTCTCGTGTGCCTTGGTCAAGAACAGAGCAAGGTGGAAAAACTAAGTGCAAGGTTGTTGGAGTTAGGAGAGGACGTCGACAAGCTGCTTGAAGATATCGGAGATGACGTGGGACAAAAATTAAAGAGTAAATGTGTCACATCCCGGCCCGGAGCGGATCACTTCCCGGGCCCGCTCCACCACCATAGCACGATATTGTCCGCTTTGGGCTTACCATTCCCTCACGGTTTTGTTTTTGGGAACTCACGAGCAACTTCCCAGTGGGTCACCCATCATGGGATTGCTCTAGCCCCCTTCTCGCTTAACTTCGGAGTTCCTACGGAACCCGAAGCCAGTGAGCTCCCAAAAAGCCTCGTGCTAGGTAGGGATGAGAATATACATATAAGGATCACTCCCCTGGGCGATGTGGGATGTCACAATCCACCCCCTTTAGGGGCCCGACGTCCTCGTCGGCACATTTCCGGCCAGGGATTGGCTCTGATACCAATTTGTCACATCCCGGCCCGGGGCGGATCACTTCCCGGGAAGCCAATGAGCTCCCAAAAAGCCTCGTGCTAG

Protein Analysis

862

Amino Acids

94.11

Weight (kDa)

5.94

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2475
AatII GACGTC 2 cut(s) 2106, 2473
Acc36I ACCTGC 1 cut(s) 694
AccB1I GGYRCC 3 cut(s) 125, 898, 1534
AccB7I CCANNNNNTGG 1 cut(s) 2500
AccBSI CCGCTC 2 cut(s) 2183, 2203
AccI GTMKAC 1 cut(s) 2106
AciI CCGC 9 cut(s) 718, 1333, 1588, 1642, 1709, 2183, 2201, 2229, 2538
AclWI GGATC 5 cut(s) 467, 1344, 2193, 2423, 2548
AcoI YGGCCR 2 cut(s) 1639, 2491
AcsI RAATTY 3 cut(s) 659, 737, 1897
AcuI CTGAAG 1 cut(s) 1295
AcyI GRCGYC 3 cut(s) 1218, 2103, 2470
AdeI CACNNNGTG 1 cut(s) 943
AfaI GTAC 3 cut(s) 385, 1145, 1505
AfeI AGCGCT 2 cut(s) 597, 1066
AjiI CACGTC 4 cut(s) 1091, 1099, 1263, 2137
AjnI CCWGG 6 cut(s) 224, 475, 1691, 1725, 2424, 2493
AjuI GAANNNNNNNTTGG 2 cut(s) 515, 547
Alw21I GWGCWC 3 cut(s) 922, 2370, 2567
Alw26I GTCTC 4 cut(s) 264, 329, 1126, 1727
Alw44I GTGCAC 1 cut(s) 918
AlwI GGATC 5 cut(s) 467, 1344, 2193, 2423, 2548
Ama87I CYCGRG 4 cut(s) 5, 2194, 2532, 2549
Aor51HI AGCGCT 2 cut(s) 597, 1066
AoxI GGCC 8 cut(s) 175, 674, 1639, 2174, 2197, 2463, 2491, 2529
ApaI GGGCCC 2 cut(s) 2201, 2467
ApaLI GTGCAC 1 cut(s) 918
ApeKI GCWGC 7 cut(s) 38, 598, 746, 816, 824, 1160, 2113
ApoI RAATTY 3 cut(s) 659, 737, 1897
AseI ATTAAT 1 cut(s) 414
Asp700I GAANNNNTTC 2 cut(s) 1076, 1298
AspLEI GCGC 3 cut(s) 598, 649, 1067
AsuC2I CCSGG 9 cut(s) 2173, 2178, 2195, 2196, 2528, 2533, 2534, 2550, 2551
AsuHPI GGTGA 3 cut(s) 277, 1300, 2287
AsuII TTCGAA 1 cut(s) 706
AsuNHI GCTAGC 1 cut(s) 1048
AvaI CYCGRG 4 cut(s) 5, 2194, 2532, 2549
AvaII GGWCC 3 cut(s) 118, 535, 1630
BaeGI GKGCMC 4 cut(s) 130, 922, 2201, 2467
BanI GGYRCC 3 cut(s) 125, 898, 1534
BanII GRGCYC 7 cut(s) 574, 1332, 1715, 2201, 2370, 2467, 2567
BauI CACGAG 4 cut(s) 2033, 2274, 2381, 2578
BbsI GAAGAC 1 cut(s) 1938
Bbv12I GWGCWC 3 cut(s) 922, 2370, 2567
BbvI GCAGC 7 cut(s) 25, 585, 758, 803, 811, 1172, 2100
BccI CCATC 9 cut(s) 73, 546, 916, 980, 1247, 1565, 1837, 1911, 2307
BcgI CGANNNNNNTGC 2 cut(s) 1949, 1983
BciT130I CCWGG 6 cut(s) 226, 477, 1693, 1727, 2426, 2495
BclI TGATCA 1 cut(s) 1396
BcnI CCSGG 9 cut(s) 2173, 2178, 2195, 2196, 2528, 2533, 2534, 2550, 2551
BcoDI GTCTC 4 cut(s) 264, 329, 1126, 1727
BfmI CTRYAG 3 cut(s) 817, 1137, 1227
BfoI RGCGCY 2 cut(s) 599, 1068
BfuAI ACCTGC 1 cut(s) 694
BisI GCNGC 9 cut(s) 39, 599, 747, 817, 825, 1161, 1589, 1642, 2114
BlpI GCTNAGC 2 cut(s) 1326, 1659
BlsI GCNGC 9 cut(s) 40, 600, 748, 818, 826, 1162, 1590, 1643, 2115
BmcAI AGTACT 1 cut(s) 385
Bme18I GGWCC 3 cut(s) 118, 535, 1630
BmeT110I CYCGRG 4 cut(s) 5, 2194, 2532, 2549
BmgBI CACGTC 4 cut(s) 1091, 1099, 1263, 2137
BmrI ACTGGG 1 cut(s) 2281
BmsI GCATC 9 cut(s) 320, 475, 634, 1278, 1429, 1769, 1823, 1861, 1957
BmtI GCTAGC 1 cut(s) 1052
BmuI ACTGGG 1 cut(s) 2281
BpiI GAAGAC 1 cut(s) 1938
BplI GAGNNNNNCTC 2 cut(s) 1106, 1138
BpmI CTGGAG 1 cut(s) 845
Bpu1102I GCTNAGC 2 cut(s) 1326, 1659
Bpu14I TTCGAA 1 cut(s) 706
BpuEI CTTGAG 4 cut(s) 914, 1133, 1766, 1907
BpuMI CCSGG 9 cut(s) 2173, 2178, 2195, 2196, 2528, 2533, 2534, 2550, 2551
BsaHI GRCGYC 3 cut(s) 1218, 2103, 2470
BsaI GGTCTC 1 cut(s) 1126
BsaWI WCCGGW 1 cut(s) 1417
BsaXI ACNNNNNCTCC 6 cut(s) 1167, 1197, 2088, 2118, 2121, 2151
Bse1I ACTGG 7 cut(s) 565, 726, 862, 1019, 1551, 2287, 2361
Bse3DI GCAATG 4 cut(s) 66, 608, 1619, 1651
BseBI CCWGG 6 cut(s) 226, 477, 1693, 1727, 2426, 2495
BseMI GCAATG 4 cut(s) 66, 608, 1619, 1651
BseMII CTCAG 9 cut(s) 320, 436, 1317, 1650, 1689, 1728, 1753, 1800, 2012
BseNI ACTGG 7 cut(s) 565, 726, 862, 1019, 1551, 2287, 2361
BseRI GAGGAG 2 cut(s) 1417, 1953
BseSI GKGCMC 4 cut(s) 130, 922, 2201, 2467
BseX3I CGGCCG 1 cut(s) 1639
BseXI GCAGC 7 cut(s) 25, 585, 758, 803, 811, 1172, 2100
BseYI CCCAGC 1 cut(s) 550
BsgI GTGCAG 1 cut(s) 827
Bsh1285I CGRYCG 2 cut(s) 1642, 1677
BshFI GGCC 8 cut(s) 177, 676, 1641, 2176, 2199, 2465, 2493, 2531
BshNI GGYRCC 3 cut(s) 125, 898, 1534
BsiEI CGRYCG 2 cut(s) 1642, 1677
BsiHKAI GWGCWC 3 cut(s) 922, 2370, 2567
BsiHKCI CYCGRG 4 cut(s) 5, 2194, 2532, 2549
BsiSI CCGG 9 cut(s) 1418, 1836, 2173, 2178, 2195, 2490, 2528, 2533, 2550
BslFI GGGAC 2 cut(s) 1077, 2154
BsmAI GTCTC 4 cut(s) 264, 329, 1126, 1727
BsmFI GGGAC 2 cut(s) 1077, 2154
BsnI GGCC 8 cut(s) 177, 676, 1641, 2176, 2199, 2465, 2493, 2531
Bso31I GGTCTC 1 cut(s) 1126
BsoBI CYCGRG 4 cut(s) 5, 2194, 2532, 2549
Bsp119I TTCGAA 1 cut(s) 706
Bsp120I GGGCCC 2 cut(s) 2197, 2463
Bsp1286I GDGCHC 9 cut(s) 130, 574, 922, 1332, 1715, 2201, 2370, 2467, 2567
Bsp1407I TGTACA 2 cut(s) 1143, 1503
Bsp1720I GCTNAGC 2 cut(s) 1326, 1659
BspACI CCGC 9 cut(s) 718, 1333, 1588, 1642, 1709, 2183, 2201, 2229, 2538
BspANI GGCC 8 cut(s) 177, 676, 1641, 2176, 2199, 2465, 2493, 2531
BspCNI CTCAG 9 cut(s) 321, 435, 1318, 1651, 1690, 1727, 1752, 1801, 2011
BspMAI CTGCAG 1 cut(s) 821
BspMI ACCTGC 1 cut(s) 694
BspOI GCTAGC 1 cut(s) 1052
BspPI GGATC 5 cut(s) 467, 1344, 2193, 2423, 2548
BspQI GCTCTTC 1 cut(s) 1511
BspT104I TTCGAA 1 cut(s) 706
BspT107I GGYRCC 3 cut(s) 125, 898, 1534
BspTNI GGTCTC 1 cut(s) 1126
BsrBI CCGCTC 2 cut(s) 2183, 2203
BsrDI GCAATG 4 cut(s) 66, 608, 1619, 1651
BsrGI TGTACA 2 cut(s) 1143, 1503
BsrI ACTGG 7 cut(s) 565, 726, 862, 1019, 1551, 2287, 2361
BssNI GRCGYC 3 cut(s) 1218, 2103, 2470
BssSI CACGAG 4 cut(s) 2033, 2274, 2381, 2578
BssT1I CCWWGG 1 cut(s) 2041
Bst2BI CACGAG 4 cut(s) 2033, 2274, 2381, 2578
Bst2UI CCWGG 6 cut(s) 226, 477, 1693, 1727, 2426, 2495
Bst4CI ACNGT 8 cut(s) 275, 392, 941, 1141, 1508, 1770, 1883, 2255
Bst6I CTCTTC 3 cut(s) 973, 1318, 1511
BstACI GRCGYC 3 cut(s) 1218, 2103, 2470
BstAUI TGTACA 2 cut(s) 1143, 1503
BstBI TTCGAA 1 cut(s) 706
BstC8I GCNNGC 7 cut(s) 651, 655, 1050, 1539, 1711, 1893, 2201
BstEII GGTNACC 1 cut(s) 2293
BstH2I RGCGCY 2 cut(s) 599, 1068
BstHHI GCGC 3 cut(s) 598, 649, 1067
BstMAI GTCTC 4 cut(s) 264, 329, 1126, 1727
BstMCI CGRYCG 2 cut(s) 1642, 1677
BstMWI GCNNNNNNNGC 7 cut(s) 47, 56, 578, 934, 1655, 1793, 1976
BstNI CCWGG 6 cut(s) 226, 477, 1693, 1727, 2426, 2495
BstNSI RCATGY 2 cut(s) 816, 1667
BstPI GGTNACC 1 cut(s) 2293
BstSFI CTRYAG 3 cut(s) 817, 1137, 1227
BstSLI GKGCMC 4 cut(s) 130, 922, 2201, 2467
BstV1I GCAGC 7 cut(s) 25, 585, 758, 803, 811, 1172, 2100
BstV2I GAAGAC 1 cut(s) 1938
BstX2I RGATCY 1 cut(s) 1349
BstYI RGATCY 1 cut(s) 1349
BstZI CGGCCG 1 cut(s) 1639
BsuRI GGCC 8 cut(s) 177, 676, 1641, 2176, 2199, 2465, 2493, 2531
BtgZI GCGATG 1 cut(s) 2445
BtrI CACGTC 4 cut(s) 1091, 1099, 1263, 2137
BtsI GCAGTG 2 cut(s) 306, 1536
BtsIMutI CAGTG 9 cut(s) 210, 306, 430, 572, 869, 1146, 1536, 2294, 2368
BveI ACCTGC 1 cut(s) 694
Cac8I GCNNGC 7 cut(s) 651, 655, 1050, 1539, 1711, 1893, 2201
CfoI GCGC 3 cut(s) 598, 649, 1067
Cfr9I CCCGGG 3 cut(s) 2194, 2532, 2549
CseI GACGC 1 cut(s) 1226
Csp6I GTAC 3 cut(s) 384, 1144, 1504
CviAII CATG 7 cut(s) 167, 813, 842, 973, 1664, 1819, 2303
CviQI GTAC 3 cut(s) 384, 1144, 1504
DraIII CACNNNGTG 1 cut(s) 943
DrdI GACNNNNNNGTC 1 cut(s) 2475
DseDI GACNNNNNNGTC 1 cut(s) 2475
EaeI YGGCCR 2 cut(s) 1639, 2491
EagI CGGCCG 1 cut(s) 1639
Eam1104I CTCTTC 3 cut(s) 973, 1318, 1511
EarI CTCTTC 3 cut(s) 973, 1318, 1511
EciI GGCGGA 1 cut(s) 2553
Ecl136II GAGCTC 2 cut(s) 2368, 2565
EclXI CGGCCG 1 cut(s) 1639
Eco130I CCWWGG 1 cut(s) 2041
Eco24I GRGCYC 7 cut(s) 574, 1332, 1715, 2201, 2370, 2467, 2567
Eco31I GGTCTC 1 cut(s) 1126
Eco32I GATATC 1 cut(s) 2125
Eco47I GGWCC 3 cut(s) 118, 535, 1630
Eco47III AGCGCT 2 cut(s) 597, 1066
Eco52I CGGCCG 1 cut(s) 1639
Eco53kI GAGCTC 2 cut(s) 2368, 2565
Eco57I CTGAAG 1 cut(s) 1295
Eco88I CYCGRG 4 cut(s) 5, 2194, 2532, 2549
Eco91I GGTNACC 1 cut(s) 2293
EcoICRI GAGCTC 2 cut(s) 2368, 2565
EcoO109I RGGNCCY 2 cut(s) 1630, 2463
EcoO65I GGTNACC 1 cut(s) 2293
EcoRII CCWGG 6 cut(s) 224, 475, 1691, 1725, 2424, 2493
EcoRV GATATC 1 cut(s) 2125
EcoT14I CCWWGG 1 cut(s) 2041
EcoT22I ATGCAT 1 cut(s) 608
EcoT38I GRGCYC 7 cut(s) 574, 1332, 1715, 2201, 2370, 2467, 2567
ErhI CCWWGG 1 cut(s) 2041
FaeI CATG 7 cut(s) 170, 816, 845, 976, 1667, 1822, 2306
FalI AAGNNNNNCTT 4 cut(s) 1205, 1237, 1785, 1817
FaqI GGGAC 2 cut(s) 1077, 2154
FatI CATG 7 cut(s) 166, 812, 841, 972, 1663, 1818, 2302
FauI CCCGC 3 cut(s) 1340, 1702, 2208
FauNDI CATATG 1 cut(s) 1009
FbaI TGATCA 1 cut(s) 1396
FblI GTMKAC 1 cut(s) 2106
Fnu4HI GCNGC 9 cut(s) 39, 599, 747, 817, 825, 1161, 1589, 1642, 2114
FriOI GRGCYC 7 cut(s) 574, 1332, 1715, 2201, 2370, 2467, 2567
Fsp4HI GCNGC 9 cut(s) 39, 599, 747, 817, 825, 1161, 1589, 1642, 2114
GlaI GCGC 3 cut(s) 597, 648, 1066
GluI GCNGC 9 cut(s) 39, 599, 747, 817, 825, 1161, 1589, 1642, 2114
GsaI CCCAGC 1 cut(s) 554
GsuI CTGGAG 1 cut(s) 845
HaeII RGCGCY 2 cut(s) 599, 1068
HaeIII GGCC 8 cut(s) 177, 676, 1641, 2176, 2199, 2465, 2493, 2531
HapII CCGG 9 cut(s) 1418, 1836, 2173, 2178, 2195, 2490, 2528, 2533, 2550
HgaI GACGC 1 cut(s) 1226
HhaI GCGC 3 cut(s) 598, 649, 1067
Hin1I GRCGYC 3 cut(s) 1218, 2103, 2470
Hin1II CATG 7 cut(s) 170, 816, 845, 976, 1667, 1822, 2306
Hin6I GCGC 3 cut(s) 596, 647, 1065
HinP1I GCGC 3 cut(s) 596, 647, 1065
HincII GTYRAC 3 cut(s) 781, 1511, 2107
HindII GTYRAC 3 cut(s) 781, 1511, 2107
HindIII AAGCTT 2 cut(s) 1297, 1799
HpaII CCGG 9 cut(s) 1418, 1836, 2173, 2178, 2195, 2490, 2528, 2533, 2550
HphI GGTGA 3 cut(s) 277, 1300, 2287
Hpy166II GTNNAC 6 cut(s) 781, 920, 1144, 1504, 1511, 2107
Hpy188III TCNNGA 9 cut(s) 641, 1027, 1462, 1754, 1886, 1907, 1958, 2048, 2274
Hpy8I GTNNAC 6 cut(s) 781, 920, 1144, 1504, 1511, 2107
Hpy99I CGWCG 3 cut(s) 2108, 2472, 2481
HpyAV CCTTC 6 cut(s) 844, 1207, 1243, 1906, 1996, 2332
HpyCH4III ACNGT 8 cut(s) 275, 392, 941, 1141, 1508, 1770, 1883, 2255
HpyCH4IV ACGT 6 cut(s) 1090, 1098, 1262, 2103, 2136, 2470
HpyF10VI GCNNNNNNNGC 7 cut(s) 47, 56, 578, 934, 1655, 1793, 1976
HpySE526I ACGT 6 cut(s) 1090, 1098, 1262, 2103, 2136, 2470
Hsp92I GRCGYC 3 cut(s) 1218, 2103, 2470
Hsp92II CATG 7 cut(s) 170, 816, 845, 976, 1667, 1822, 2306
HspAI GCGC 3 cut(s) 596, 647, 1065
Ksp22I TGATCA 1 cut(s) 1396
LguI GCTCTTC 1 cut(s) 1511
LmnI GCTCC 7 cut(s) 56, 577, 1447, 2180, 2208, 2373, 2570
Lsp1109I GCAGC 7 cut(s) 25, 585, 758, 803, 811, 1172, 2100
LweI GCATC 9 cut(s) 320, 475, 634, 1278, 1429, 1769, 1823, 1861, 1957
MaeII ACGT 6 cut(s) 1090, 1098, 1262, 2103, 2136, 2470
MaeIII GTNAC 6 cut(s) 1039, 1099, 2164, 2293, 2441, 2519
MbiI CCGCTC 2 cut(s) 2183, 2203
MflI RGATCY 1 cut(s) 1349
MhlI GDGCHC 9 cut(s) 130, 574, 922, 1332, 1715, 2201, 2370, 2467, 2567
MlyI GAGTC 2 cut(s) 148, 1731
MmeI TCCRAC 4 cut(s) 411, 444, 1752, 2067
Mph1103I ATGCAT 1 cut(s) 608
MroXI GAANNNNTTC 2 cut(s) 1076, 1298
MseI TTAA 7 cut(s) 89, 414, 441, 762, 1343, 2150, 2331
MspA1I CMGCKG 1 cut(s) 1163
MspI CCGG 9 cut(s) 1418, 1836, 2173, 2178, 2195, 2490, 2528, 2533, 2550
MvaI CCWGG 6 cut(s) 226, 477, 1693, 1727, 2426, 2495
MwoI GCNNNNNNNGC 7 cut(s) 47, 56, 578, 934, 1655, 1793, 1976
NciI CCSGG 9 cut(s) 2173, 2178, 2195, 2196, 2528, 2533, 2534, 2550, 2551
NdeI CATATG 1 cut(s) 1009
NheI GCTAGC 1 cut(s) 1048
NlaIII CATG 7 cut(s) 170, 816, 845, 976, 1667, 1822, 2306
NmeAIII GCCGAG 2 cut(s) 1617, 2005
NmuCI GTSAC 6 cut(s) 1039, 1099, 2164, 2293, 2441, 2519
NsiI ATGCAT 1 cut(s) 608
NspI RCATGY 2 cut(s) 816, 1667
NspV TTCGAA 1 cut(s) 706
PaeR7I CTCGAG 1 cut(s) 5
PasI CCCWGGG 1 cut(s) 2425
PciSI GCTCTTC 1 cut(s) 1511
PcsI WCGNNNNNNNCGW 1 cut(s) 2133
PdmI GAANNNNTTC 2 cut(s) 1076, 1298
PfeI GAWTC 8 cut(s) 190, 637, 700, 708, 1085, 1235, 1805, 1847
PflMI CCANNNNNTGG 1 cut(s) 2500
PfoI TCCNGGA 1 cut(s) 475
PkrI GCNGC 9 cut(s) 40, 600, 748, 818, 826, 1162, 1590, 1643, 2115
Ple19I CGATCG 1 cut(s) 1677
PleI GAGTC 2 cut(s) 148, 1730
PpsI GAGTC 2 cut(s) 148, 1730
PpuMI RGGWCCY 1 cut(s) 1630
PshBI ATTAAT 1 cut(s) 414
Psp124BI GAGCTC 2 cut(s) 2370, 2567
Psp5II RGGWCCY 1 cut(s) 1630
Psp6I CCWGG 6 cut(s) 224, 475, 1691, 1725, 2424, 2493
PspEI GGTNACC 1 cut(s) 2293
PspFI CCCAGC 1 cut(s) 550
PspGI CCWGG 6 cut(s) 224, 475, 1691, 1725, 2424, 2493
PspOMI GGGCCC 2 cut(s) 2197, 2463
PspPPI RGGWCCY 1 cut(s) 1630
PspXI VCTCGAGB 1 cut(s) 5
PstI CTGCAG 1 cut(s) 821
PsuI RGATCY 1 cut(s) 1349
PvuI CGATCG 1 cut(s) 1677
PvuII CAGCTG 1 cut(s) 1163
RsaI GTAC 3 cut(s) 385, 1145, 1505
RsaNI GTAC 3 cut(s) 384, 1144, 1504
SacI GAGCTC 2 cut(s) 2370, 2567
SalI GTCGAC 1 cut(s) 2105
SapI GCTCTTC 1 cut(s) 1511
SaqAI TTAA 7 cut(s) 89, 414, 441, 762, 1343, 2150, 2331
SatI GCNGC 9 cut(s) 39, 599, 747, 817, 825, 1161, 1589, 1642, 2114
ScaI AGTACT 1 cut(s) 385
SchI GAGTC 2 cut(s) 148, 1731
SduI GDGCHC 9 cut(s) 130, 574, 922, 1332, 1715, 2201, 2370, 2467, 2567
SfaNI GCATC 9 cut(s) 320, 475, 634, 1278, 1429, 1769, 1823, 1861, 1957
SfcI CTRYAG 3 cut(s) 817, 1137, 1227
Sfr274I CTCGAG 1 cut(s) 5
SfuI TTCGAA 1 cut(s) 706
SinI GGWCC 3 cut(s) 118, 535, 1630
SlaI CTCGAG 1 cut(s) 5
SmaI CCCGGG 3 cut(s) 2196, 2534, 2551
SmlI CTYRAG 5 cut(s) 5, 893, 1112, 1781, 1886
SmoI CTYRAG 5 cut(s) 5, 893, 1112, 1781, 1886
SsiI CCGC 9 cut(s) 718, 1333, 1588, 1642, 1709, 2183, 2201, 2229, 2538
SstI GAGCTC 2 cut(s) 2370, 2567
StyI CCWWGG 1 cut(s) 2041
TaaI ACNGT 8 cut(s) 275, 392, 941, 1141, 1508, 1770, 1883, 2255
TaiI ACGT 6 cut(s) 1093, 1101, 1265, 2106, 2139, 2473
TaqI TCGA 5 cut(s) 6, 698, 706, 1281, 2106
TatI WGTACW 3 cut(s) 383, 1143, 1503
TauI GCSGC 2 cut(s) 1591, 1644
TfiI GAWTC 8 cut(s) 190, 637, 700, 708, 1085, 1235, 1805, 1847
Tru1I TTAA 7 cut(s) 89, 414, 441, 762, 1343, 2150, 2331
Tru9I TTAA 7 cut(s) 89, 414, 441, 762, 1343, 2150, 2331
TscAI CASTG 9 cut(s) 217, 313, 430, 572, 869, 1146, 1536, 2294, 2368
TseFI GTSAC 6 cut(s) 1039, 1099, 2164, 2293, 2441, 2519
TseI GCWGC 7 cut(s) 38, 598, 746, 816, 824, 1160, 2113
Tsp45I GTSAC 6 cut(s) 1039, 1099, 2164, 2293, 2441, 2519
TspDTI ATGAA 2 cut(s) 221, 863
TspGWI ACGGA 2 cut(s) 575, 2363
TspMI CCCGGG 3 cut(s) 2194, 2532, 2549
TspRI CASTG 9 cut(s) 217, 313, 430, 572, 869, 1146, 1536, 2294, 2368
Van91I CCANNNNNTGG 1 cut(s) 2500
VneI GTGCAC 1 cut(s) 918
VpaK11BI GGWCC 3 cut(s) 118, 535, 1630
VspI ATTAAT 1 cut(s) 414
XapI RAATTY 3 cut(s) 659, 737, 1897
XbaI TCTAGA 1 cut(s) 1906
XceI RCATGY 2 cut(s) 816, 1667
XcmI CCANNNNNNNNNTGG 2 cut(s) 50, 1960
XhoI CTCGAG 1 cut(s) 5
XmaI CCCGGG 3 cut(s) 2194, 2532, 2549
XmiI GTMKAC 1 cut(s) 2106
XmnI GAANNNNTTC 2 cut(s) 1076, 1298
ZraI GACGTC 2 cut(s) 2104, 2471
ZrmI AGTACT 1 cut(s) 385
Zsp2I ATGCAT 1 cut(s) 608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.