pycom11g21860

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
24869314 .. 24874640
5327 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g21860.9

Sequence Viewer

Length: 3930 bp
ATGCTTGGGGACTTGGGTATTTATAGCAAACCAAATGAAAGCTACACCACACACTTAATTAAACTAAGATTATTTGCTACCACACAAAACTCATTAATTTCACCTAATTTTTTCCACTCAACCATATCTAACATTGTAATTGTAAGCAATTACATCATCAAACTAGATATGGACTTGGACTTTAGATTGGGTTGTGGATTACTTATAGTTTTGGGCTTGACATTGATTCTCAACAAAAACCACATGCGAGTGAGGTGGATATCAAAACCAAGACAAATCCCAGCTTTCAAAATGAAGAGGATCGGAATTTTTCCTTATACTTTTAATGCTGCCCTTGATAACACCTACATTCTTTTTGTTTGTTGGAGGCAACTGAAAATTGACAAGAATCTCGCAATCTATGGATTCATTTGTTTGTTGCTGATTGCTTGGGCCCAGATTTCGGCAGCCAACCATGCACTGGCTTCCGTCTGTATTCGAAGATTTTTGCAGTTTAGAAAGTACCTTTCCCAACTGATTGAAATTGATGGTTATTTGGTAGCTGACATTGACAGGGATGCTGTGGTAGCTGTAGCTCACAGGAGGTGCAAAGTAGAAGCTGTCTGCACCGAAGAGAGGGACAGCGCTGCCCCAAGCTACCTCCCTTTTAGAATTTTTGACTTGCATGCCAAATTTCATTTCGGGAGAAAATGCTTTGAGATGTTTGTAGGTATTGCGATGAGCAGCCTTGTTTCTCGGGCACAACTTGATTACCTTGTCAATTTTAGTATATTCATATTTCAAATCTGGATGTGGAAACATTACCATATAATTCTGAGGGCTTTCAAAAGCGATGCTTTCAAAGTAACCCGACGCTGTCTGTCACATCCCGGCCCGGGGCGGACCACTTCCCGGGCCCGCTCCACTACCGTAGCACGATATTGTCCGCTTTGGGCTTACCATTCCCTCACGGTTTTGTTTTTGGGAACTCATGAGCAACTTCCCAGTGGAGTTCCTACAGAACCCGAAGCCAGTGAGCTCTCAAAAAGCCTCGCGCTAAGTAGGGATGGGAATATACATTTAAGGATCACTCCCCTGGGTGATGTGGGATGTTACACTGTCACGTTTTTGCTGCTCCAAATTTGCCCCACGGTGCTACTAGTCTTTCCGATTGTCCATATTAATCTGTTGCGTTTAAGACTCGACAAGCAACAACATATAACTGATTGTTCTTTGCATCCCATGACCCTTCCCCAAGCAATATTCTATCGGGATAAAAGGACCTCCGATACCAGGAATTTTTACTTTCTGCAAATTCCACTTCAACTCTCAACCTTCGAGATAACTCAGAAGCTGCAAATGGAGGCAAACTCCTGCCCCTTTACAGTTGAAAGTACCGAACAAAATGTGGCCAATGGAAATGAACTTGAGGGAAAATCACTTCCAGCAGAACAACTATTGTTGCATTTATTTGAAACCAAAGAGTACTCTACCTTGGATCACTCTCAGAATTCATCGAGCTCTCTAAGGTTCCAAGAGCTTAAGAACAGCGGGATAATAAAGCCAACGACCATGTCCCAATTTAAAGCTTACCGAACTTGGTCGACGATGAGTTGTGACATTTCCCACATAATAAAACGCACTGCCTCTTTGAAATCGAAGACTTCCTTCAATCTTGAACAAGCCTGGTACGTAGGTTCTTTGAACACTCCAGGGGGTGAACTCAATCCAGTATTCGGACTCGTGATAAGCCTACATATCTACTTTGCATTGACTGGGGAACGATTGAATCACAATGATCAGAATAAAAGATGTGATCAAAAGGTGGGGAAGGCGACGAAACTGAATAAGAGAAGCGGCGAAAACAAAGAAGAACATGAGAAGCTTTGGCAATGCGTAACACATCTTCAAAGAGGTGGTAGCATAAGACTATTGGTTCTTTCTAAATTCAATGTAAAGGTACTGCAATGTTTCGATTGTTTTATGTGCTTACCACATCAAAGTCACTTTCGTGACAGATTCAAAGAGAATGAGGAGTTTATGACAATTTTCAAAGACAAGAAGAACAAACAAAACTCAAGACTAACAAAAATATGGGGACAAAGGAAAAGGAAAATATCGGAAATACTTTCATACATGAAAGATTTGAATCAAACTATTTTTAGAGTTGAAATAACAGTTTCTGATATCTATGGTTTAATGCAACCAAAATTAGAAGCATCTATGTGCCAATTGGAGTTCGAAAAAGGAGCACGTTTGGCCAGCTTAGCAGCGTTCCCGCCTCCTTCCGAAACCATTTTGTTTTTAGTTTTTGACTTTCAATTCAATTTAATGCTAGAGGATAATAGGATAGATGTAGAAGGAACGAATAAGAAAAGGGACACCAAAAGCCGAAAACTATTTCAAGTTGTTTTCACTTTTAAGATTTTATTTACATTCATTCATTTTTATTTATTTCTTTCTCTCACATCACACTCTTGTTTTCTCCTTATACTTTTCTACTTAAGTCCCTTAAAAACAAAAAACAAAATGTCCCTTTCGTTAAATTTTAAATCTTTCTCTTTAAATAAAGTTGATTTTTATTTCCCTTTCGTTTTCTCCTTATACTTTTCTACGTTTTCTTATATCGAAAACTATAAACGAAAAACGAAGTCGTTATCCAATGAGCCCTTAGAATATTGCTTTGTCAAAAAAGGAGTGAGGACGTGTGCCCATGTCAATGAAACTAGAGCCTTTGGCGGAGACGAACACAAAGAGCTCGGTGCAGGAAGAAAGTTCTTAACCAATGAAGTTACAAGCTCCTTCACTCAATCTTTTTGGTTACGGACAGTTTTGATGATTATTTATAGGAACTTTTGTATCAGTTGGTTTGAATCTCTTCCCCTTAGAAAGGATGCAAAGAACTCTGTGGAATGCTGCTGGTTCTGCAACTATTCTGCAGATGTCTCACATCCAAAATTTATTCTAAGCACCTCTAAACTTGCGCTTCTCTCCTTCTCCATGTCTTTTACGTTTTTCTCGCTAGTTTTCTTTTTGTTTTCTTATCGAAAATCTCTAGAATGTGTGCGCAAACATGATCGAAAACCTGTGACGAAGCAAATATTGTTTTCTAATCTTATAGAAAAGAAAAATGAAAATGCACACATTATAGCTTACAAGTTCAACATATTACAAACAGAAAGAAAGATAAAAGGAAAAAAGGAAAAAACACTAAAACATGATACATACTCAAAAGGACCTTCTCATATTCACCCAACTCTATCAACTTTTTGGGGAGAAAGCAACGACCCCCAAACTACTAGGAATTATGACATCCCAAGAATCTACTGCAGGGCTTGCATACAGGTACGACTCGTTGAATTGGGGATGAGCAAAGTTGTGAGCCCTGTAAAGATCGTATGCATAAGGCAGTGCTCGAACAAAAAACATGTTGAGCACAATTTGAGGCAGCAAAAAACCGTCCATAACCAAACCGGATTGTTCTTCTTCCAAATCTGTTTATGGAGAAGCAAAATGGCGAAAGCCCCTGCAACATATAGTAGTAAGACCACAAAGAGAGTCTTTTTCTCCATGAGCCAGAGCTTGTTGCGATTTCCATTTTTTGATTTTGCTGACCAAGTTAGCTGCAGGAGACGGATTTGCAGCAAGAAAGCTACCATTGTTATCACCCTCACAATTACCTCATTAACTTCAAGCCATCCTCCGGTTCCAAGGAACACATTTTGGCTGTTGGTGCTACTCGTGAATATGGCTTCAAGTAGCATGAAAATGGAAATGGAGGGAAGAACATCTGGATACTTTTTCACATGGAAGAGTTGTTGCGCCACAAAGAAGCACGCCAGCGTGGTGGACATAAGAACCAATATGATCTCCACATCCATCCTCCAAATGGACCGCCTTTCTTCGATGAGGGTGGCGGAAGTTGAGGTTAAATCCCAAGTTTCAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1310

Amino Acids

151.42

Weight (kDa)

9.64

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 3047
AccB7I CCANNNNNTGG 1 cut(s) 460
AccBSI CCGCTC 1 cut(s) 900
AccI GTMKAC 1 cut(s) 1583
AccII CGCG 1 cut(s) 1034
AciI CCGC 9 cut(s) 880, 898, 926, 1530, 1836, 2258, 2718, 3874, 3896
AclWI GGATC 3 cut(s) 308, 1073, 1485
AcoI YGGCCR 2 cut(s) 1389, 2238
AfaI GTAC 6 cut(s) 503, 1375, 1466, 1670, 1941, 3327
AfeI AGCGCT 1 cut(s) 625
AflII CTTAAG 2 cut(s) 1520, 2482
AflIII ACRYGT 2 cut(s) 2684, 3406
AhlI ACTAGT 1 cut(s) 1138
AjiI CACGTC 1 cut(s) 2685
AjnI CCWGG 4 cut(s) 1074, 1271, 1664, 1690
AjuI GAANNNNNNNTTGG 2 cut(s) 662, 694
AleI CACNNNNGTG 1 cut(s) 1989
Alw21I GWGCWC 6 cut(s) 1020, 1502, 2233, 2739, 3395, 3417
Alw26I GTCTC 3 cut(s) 2715, 2929, 3604
AlwI GGATC 3 cut(s) 308, 1073, 1485
AlwNI CAGNNNCTG 2 cut(s) 1333, 2162
Ama87I CYCGRG 3 cut(s) 735, 874, 891
Aor51HI AGCGCT 1 cut(s) 625
AoxI GGCC 5 cut(s) 432, 871, 894, 1389, 2238
ApaI GGGCCC 2 cut(s) 436, 898
AseI ATTAAT 2 cut(s) 95, 1161
Asp700I GAANNNNTTC 1 cut(s) 2856
AspLEI GCGC 5 cut(s) 626, 1036, 2965, 3048, 3803
AspS9I GGNCC 9 cut(s) 432, 433, 872, 882, 894, 895, 1260, 3215, 3871
AsuC2I CCSGG 5 cut(s) 870, 875, 876, 892, 893
AsuHPI GGTGA 5 cut(s) 93, 1091, 1709, 3221, 3637
AsuII TTCGAA 2 cut(s) 478, 2220
AvaI CYCGRG 3 cut(s) 735, 874, 891
AvaII GGWCC 4 cut(s) 882, 1260, 3215, 3871
BaeGI GKGCMC 4 cut(s) 436, 742, 898, 2692
BaeI ACNNNNGTAYC 4 cut(s) 1660, 1693, 2821, 2854
BalI TGGCCA 2 cut(s) 1391, 2240
BanII GRGCYC 7 cut(s) 436, 898, 1020, 1502, 2649, 2739, 3365
BarI GAAGNNNNNNTAC 2 cut(s) 1869, 1901
BauI CACGAG 2 cut(s) 1721, 3719
BbsI GAAGAC 1 cut(s) 1646
Bbv12I GWGCWC 6 cut(s) 1020, 1502, 2233, 2739, 3395, 3417
BccI CCATC 4 cut(s) 521, 1040, 3684, 3866
BciT130I CCWGG 4 cut(s) 1076, 1273, 1666, 1692
BciVI GTATCC 1 cut(s) 3767
BclI TGATCA 2 cut(s) 1777, 1795
BcnI CCSGG 5 cut(s) 870, 875, 876, 892, 893
BcoDI GTCTC 3 cut(s) 2715, 2929, 3604
BcuI ACTAGT 1 cut(s) 1138
BfaI CTAG 7 cut(s) 164, 1139, 2315, 2706, 3002, 3035, 3279
BfmI CTRYAG 5 cut(s) 570, 996, 2916, 3307, 3604
BfoI RGCGCY 1 cut(s) 627
BfrI CTTAAG 2 cut(s) 1520, 2482
BfuI GTATCC 1 cut(s) 3767
BlpI GCTNAGC 1 cut(s) 2245
BmcAI AGTACT 1 cut(s) 1466
Bme1390I CCNGG 9 cut(s) 870, 875, 876, 892, 893, 1076, 1273, 1666, 1692
Bme18I GGWCC 4 cut(s) 882, 1260, 3215, 3871
BmeT110I CYCGRG 3 cut(s) 735, 874, 891
BmgBI CACGTC 1 cut(s) 2685
BmgT120I GGNCC 9 cut(s) 432, 433, 872, 882, 894, 895, 1260, 3215, 3871
BmiI GGNNCC 4 cut(s) 434, 896, 1511, 3687
BmrFI CCNGG 9 cut(s) 870, 875, 876, 892, 893, 1076, 1273, 1666, 1692
BmrI ACTGGG 2 cut(s) 978, 1764
BmsI GCATC 5 cut(s) 547, 823, 1225, 2207, 2863
BmuI ACTGGG 2 cut(s) 978, 1764
BpiI GAAGAC 1 cut(s) 1646
BplI GAGNNNNNCTC 2 cut(s) 1334, 1366
BpmI CTGGAG 1 cut(s) 1674
Bpu1102I GCTNAGC 1 cut(s) 2245
Bpu14I TTCGAA 2 cut(s) 478, 2220
BpuEI CTTGAG 2 cut(s) 1427, 2041
BpuMI CCSGG 5 cut(s) 870, 875, 876, 892, 893
BsaAI YACGTR 1 cut(s) 1672
BsaBI GATNNNNATC 1 cut(s) 2127
BsaJI CCNNGG 9 cut(s) 874, 875, 891, 1074, 1075, 1128, 1473, 1691, 3689
BsaWI WCCGGW 2 cut(s) 3452, 3682
Bse1I ACTGG 5 cut(s) 465, 984, 1011, 1709, 1759
Bse3DI GCAATG 2 cut(s) 1877, 1952
Bse8I GATNNNNATC 1 cut(s) 2127
BseBI CCWGG 4 cut(s) 1076, 1273, 1666, 1692
BseDI CCNNGG 9 cut(s) 874, 875, 891, 1074, 1075, 1128, 1473, 1691, 3689
BseJI GATNNNNATC 1 cut(s) 2127
BseMI GCAATG 2 cut(s) 1877, 1952
BseMII CTCAG 3 cut(s) 806, 1340, 1499
BseNI ACTGG 5 cut(s) 465, 984, 1011, 1709, 1759
BseRI GAGGAG 1 cut(s) 2027
BseSI GKGCMC 4 cut(s) 436, 742, 898, 2692
BseYI CCCAGC 1 cut(s) 280
BsgI GTGCAG 2 cut(s) 589, 2763
Bsh1236I CGCG 1 cut(s) 1034
BshFI GGCC 5 cut(s) 434, 873, 896, 1391, 2240
BsiHKAI GWGCWC 6 cut(s) 1020, 1502, 2233, 2739, 3395, 3417
BsiHKCI CYCGRG 3 cut(s) 735, 874, 891
BsiSI CCGG 5 cut(s) 870, 875, 892, 3453, 3683
BslFI GGGAC 7 cut(s) 23, 632, 1540, 2091, 2372, 2472, 2497
BsmAI GTCTC 3 cut(s) 2715, 2929, 3604
BsmBI CGTCTC 2 cut(s) 2715, 3604
BsmFI GGGAC 7 cut(s) 23, 632, 1540, 2091, 2372, 2472, 2497
BsmI GAATGC 1 cut(s) 2897
BsnI GGCC 5 cut(s) 434, 873, 896, 1391, 2240
BsoBI CYCGRG 3 cut(s) 735, 874, 891
Bsp119I TTCGAA 2 cut(s) 478, 2220
Bsp120I GGGCCC 2 cut(s) 432, 894
Bsp143I GATC 8 cut(s) 300, 1065, 1477, 1777, 1795, 3055, 3372, 3846
Bsp1720I GCTNAGC 1 cut(s) 2245
BspACI CCGC 9 cut(s) 880, 898, 926, 1530, 1836, 2258, 2718, 3874, 3896
BspANI GGCC 5 cut(s) 434, 873, 896, 1391, 2240
BspCNI CTCAG 3 cut(s) 807, 1339, 1498
BspFNI CGCG 1 cut(s) 1034
BspHI TCATGA 1 cut(s) 970
BspLI GGNNCC 4 cut(s) 434, 896, 1511, 3687
BspMAI CTGCAG 3 cut(s) 2920, 3311, 3608
BspPI GGATC 3 cut(s) 308, 1073, 1485
BspT104I TTCGAA 2 cut(s) 478, 2220
BspTI CTTAAG 2 cut(s) 1520, 2482
BsrBI CCGCTC 1 cut(s) 900
BsrDI GCAATG 2 cut(s) 1877, 1952
BsrI ACTGG 5 cut(s) 465, 984, 1011, 1709, 1759
BssECI CCNNGG 9 cut(s) 874, 875, 891, 1074, 1075, 1128, 1473, 1691, 3689
BssMI GATC 8 cut(s) 300, 1065, 1477, 1777, 1795, 3055, 3372, 3846
BssSI CACGAG 2 cut(s) 1721, 3719
BssT1I CCWWGG 2 cut(s) 1473, 3689
Bst2BI CACGAG 2 cut(s) 1721, 3719
Bst2UI CCWGG 4 cut(s) 1076, 1273, 1666, 1692
Bst4CI ACNGT 8 cut(s) 910, 952, 1099, 1132, 1366, 2158, 2809, 3439
Bst6I CTCTTC 4 cut(s) 290, 606, 2862, 3785
BstAFI CTTAAG 2 cut(s) 1520, 2482
BstAPI GCANNNNNTGC 1 cut(s) 3315
BstBAI YACGTR 1 cut(s) 1672
BstBI TTCGAA 2 cut(s) 478, 2220
BstC8I GCNNGC 6 cut(s) 666, 898, 2242, 3316, 3816, 3820
BstDSI CCRYGG 1 cut(s) 1128
BstENI CCTNNNNNAGG 1 cut(s) 2867
BstFNI CGCG 1 cut(s) 1034
BstH2I RGCGCY 1 cut(s) 627
BstHHI GCGC 5 cut(s) 626, 1036, 2965, 3048, 3803
BstKTI GATC 8 cut(s) 303, 1068, 1480, 1780, 1798, 3058, 3375, 3849
BstMAI GTCTC 3 cut(s) 2715, 2929, 3604
BstMBI GATC 8 cut(s) 300, 1065, 1477, 1777, 1795, 3055, 3372, 3846
BstMWI GCNNNNNNNGC 7 cut(s) 455, 566, 2237, 2246, 2904, 3315, 3712
BstNI CCWGG 4 cut(s) 1076, 1273, 1666, 1692
BstNSI RCATGY 3 cut(s) 247, 668, 3410
BstSCI CCNGG 9 cut(s) 868, 873, 874, 890, 891, 1074, 1271, 1664, 1690
BstSFI CTRYAG 5 cut(s) 570, 996, 2916, 3307, 3604
BstSLI GKGCMC 4 cut(s) 436, 742, 898, 2692
BstSNI TACGTA 1 cut(s) 1672
BstUI CGCG 1 cut(s) 1034
BstV2I GAAGAC 1 cut(s) 1646
BstXI CCANNNNNNTGG 1 cut(s) 3826
BsuI GTATCC 1 cut(s) 3767
BsuRI GGCC 5 cut(s) 434, 873, 896, 1391, 2240
BtgI CCRYGG 1 cut(s) 1128
BtgZI GCGATG 2 cut(s) 731, 846
BtrI CACGTC 1 cut(s) 2685
BtsI GCAGTG 2 cut(s) 1620, 3395
BtsIMutI CAGTG 6 cut(s) 458, 991, 1018, 1095, 1620, 3395
Cac8I GCNNGC 6 cut(s) 666, 898, 2242, 3316, 3816, 3820
CaiI CAGNNNCTG 2 cut(s) 1333, 2162
CciI TCATGA 1 cut(s) 970
CfoI GCGC 5 cut(s) 626, 1036, 2965, 3048, 3803
Cfr13I GGNCC 9 cut(s) 432, 433, 872, 882, 894, 895, 1260, 3215, 3871
Cfr9I CCCGGG 2 cut(s) 874, 891
CseI GACGC 1 cut(s) 861
Csp6I GTAC 6 cut(s) 502, 1374, 1465, 1669, 1940, 3326
CviQI GTAC 6 cut(s) 502, 1374, 1465, 1669, 1940, 3326
DpnI GATC 8 cut(s) 302, 1067, 1479, 1779, 1797, 3057, 3374, 3848
DpnII GATC 8 cut(s) 300, 1065, 1477, 1777, 1795, 3055, 3372, 3846
DraI TTTAAA 3 cut(s) 1564, 2530, 2544
EaeI YGGCCR 2 cut(s) 1389, 2238
Eam1104I CTCTTC 4 cut(s) 290, 606, 2862, 3785
EarI CTCTTC 4 cut(s) 290, 606, 2862, 3785
EciI GGCGGA 3 cut(s) 895, 2733, 3911
Ecl136II GAGCTC 3 cut(s) 1018, 1500, 2737
Eco105I TACGTA 1 cut(s) 1672
Eco130I CCWWGG 2 cut(s) 1473, 3689
Eco24I GRGCYC 7 cut(s) 436, 898, 1020, 1502, 2649, 2739, 3365
Eco32I GATATC 2 cut(s) 261, 2167
Eco47I GGWCC 4 cut(s) 882, 1260, 3215, 3871
Eco47III AGCGCT 1 cut(s) 625
Eco53kI GAGCTC 3 cut(s) 1018, 1500, 2737
Eco88I CYCGRG 3 cut(s) 735, 874, 891
EcoICRI GAGCTC 3 cut(s) 1018, 1500, 2737
EcoNI CCTNNNNNAGG 1 cut(s) 2867
EcoO109I RGGNCCY 2 cut(s) 1260, 3215
EcoRI GAATTC 1 cut(s) 1489
EcoRII CCWGG 4 cut(s) 1074, 1271, 1664, 1690
EcoRV GATATC 2 cut(s) 261, 2167
EcoT14I CCWWGG 2 cut(s) 1473, 3689
EcoT22I ATGCAT 1 cut(s) 3383
EcoT38I GRGCYC 7 cut(s) 436, 898, 1020, 1502, 2649, 2739, 3365
ErhI CCWWGG 2 cut(s) 1473, 3689
Esp3I CGTCTC 2 cut(s) 2715, 3604
FalI AAGNNNNNCTT 6 cut(s) 820, 852, 1631, 1663, 3524, 3556
FaqI GGGAC 7 cut(s) 23, 632, 1540, 2091, 2372, 2472, 2497
FauI CCCGC 3 cut(s) 905, 1523, 2265
FbaI TGATCA 2 cut(s) 1777, 1795
FblI GTMKAC 1 cut(s) 1583
FriOI GRGCYC 7 cut(s) 436, 898, 1020, 1502, 2649, 2739, 3365
FspBI CTAG 7 cut(s) 164, 1139, 2315, 2706, 3002, 3035, 3279
FspI TGCGCA 1 cut(s) 3047
GlaI GCGC 5 cut(s) 625, 1035, 2964, 3047, 3802
GsaI CCCAGC 1 cut(s) 284
GsuI CTGGAG 1 cut(s) 1674
HaeII RGCGCY 1 cut(s) 627
HaeIII GGCC 5 cut(s) 434, 873, 896, 1391, 2240
HapII CCGG 5 cut(s) 870, 875, 892, 3453, 3683
HgaI GACGC 1 cut(s) 861
HhaI GCGC 5 cut(s) 626, 1036, 2965, 3048, 3803
Hin6I GCGC 5 cut(s) 624, 1034, 2963, 3046, 3801
HinP1I GCGC 5 cut(s) 624, 1034, 2963, 3046, 3801
HincII GTYRAC 1 cut(s) 1584
HindII GTYRAC 1 cut(s) 1584
HindIII AAGCTT 2 cut(s) 1566, 1862
HpaII CCGG 5 cut(s) 870, 875, 892, 3453, 3683
HphI GGTGA 5 cut(s) 93, 1091, 1709, 3221, 3637
Hpy166II GTNNAC 3 cut(s) 1584, 1700, 3829
Hpy8I GTNNAC 3 cut(s) 1584, 1700, 3829
Hpy99I CGWCG 3 cut(s) 855, 1588, 1819
HpyAV CCTTC 9 cut(s) 1238, 1324, 1657, 1804, 2274, 2333, 2791, 2983, 3228
HpyCH4III ACNGT 8 cut(s) 910, 952, 1099, 1132, 1366, 2158, 2809, 3439
HpyCH4IV ACGT 6 cut(s) 1103, 1671, 2233, 2594, 2684, 2990
HpyF10VI GCNNNNNNNGC 7 cut(s) 455, 566, 2237, 2246, 2904, 3315, 3712
HpySE526I ACGT 6 cut(s) 1103, 1671, 2233, 2594, 2684, 2990
HspAI GCGC 5 cut(s) 624, 1034, 2963, 3046, 3801
Ksp22I TGATCA 2 cut(s) 1777, 1795
Kzo9I GATC 8 cut(s) 300, 1065, 1477, 1777, 1795, 3055, 3372, 3846
LmnI GCTCC 4 cut(s) 905, 1119, 2228, 2783
LweI GCATC 5 cut(s) 547, 823, 1225, 2207, 2863
MaeI CTAG 7 cut(s) 164, 1139, 2315, 2706, 3002, 3035, 3279
MaeII ACGT 6 cut(s) 1103, 1671, 2233, 2594, 2684, 2990
MalI GATC 8 cut(s) 302, 1067, 1479, 1779, 1797, 3057, 3374, 3848
MbiI CCGCTC 1 cut(s) 900
MboI GATC 8 cut(s) 300, 1065, 1477, 1777, 1795, 3055, 3372, 3846
MfeI CAATTG 1 cut(s) 2210
MlsI TGGCCA 2 cut(s) 1391, 2240
MluNI TGGCCA 2 cut(s) 1391, 2240
MlyI GAGTC 4 cut(s) 1173, 1713, 3324, 3546
MmeI TCCRAC 1 cut(s) 344
Mox20I TGGCCA 2 cut(s) 1391, 2240
Mph1103I ATGCAT 1 cut(s) 3383
MroXI GAANNNNTTC 1 cut(s) 2856
MscI TGGCCA 2 cut(s) 1391, 2240
MslI CAYNNNNRTG 5 cut(s) 248, 1989, 2203, 2697, 3746
Msp20I TGGCCA 2 cut(s) 1391, 2240
MspA1I CMGCKG 1 cut(s) 1530
MspCI CTTAAG 2 cut(s) 1520, 2482
MspI CCGG 5 cut(s) 870, 875, 892, 3453, 3683
MspR9I CCNGG 9 cut(s) 870, 875, 876, 892, 893, 1076, 1273, 1666, 1692
MunI CAATTG 1 cut(s) 2210
Mva1269I GAATGC 1 cut(s) 2897
MvaI CCWGG 4 cut(s) 1076, 1273, 1666, 1692
MvnI CGCG 1 cut(s) 1034
MwoI GCNNNNNNNGC 7 cut(s) 455, 566, 2237, 2246, 2904, 3315, 3712
NciI CCSGG 5 cut(s) 870, 875, 876, 892, 893
NdeII GATC 8 cut(s) 300, 1065, 1477, 1777, 1795, 3055, 3372, 3846
NlaIV GGNNCC 4 cut(s) 434, 896, 1511, 3687
NmuCI GTSAC 6 cut(s) 861, 1099, 1595, 1982, 1991, 3067
NsbI TGCGCA 1 cut(s) 3047
NsiI ATGCAT 1 cut(s) 3383
NspI RCATGY 3 cut(s) 247, 668, 3410
NspV TTCGAA 2 cut(s) 478, 2220
OliI CACNNNNGTG 1 cut(s) 1989
PacI TTAATTAA 1 cut(s) 60
PaeI GCATGC 1 cut(s) 668
PagI TCATGA 1 cut(s) 970
PasI CCCWGGG 1 cut(s) 1075
PciI ACATGT 1 cut(s) 3406
PctI GAATGC 1 cut(s) 2897
PdmI GAANNNNTTC 1 cut(s) 2856
PfeI GAWTC 8 cut(s) 226, 388, 405, 1768, 1998, 2128, 2852, 3300
PflFI GACNNNGTC 2 cut(s) 855, 1552
PflMI CCANNNNNTGG 1 cut(s) 460
PleI GAGTC 4 cut(s) 1173, 1713, 3324, 3545
PpsI GAGTC 4 cut(s) 1173, 1713, 3324, 3545
Ppu21I YACGTR 1 cut(s) 1672
PpuMI RGGWCCY 2 cut(s) 1260, 3215
PscI ACATGT 1 cut(s) 3406
PshBI ATTAAT 2 cut(s) 95, 1161
Psp124BI GAGCTC 3 cut(s) 1020, 1502, 2739
Psp5II RGGWCCY 2 cut(s) 1260, 3215
Psp6I CCWGG 4 cut(s) 1074, 1271, 1664, 1690
PspFI CCCAGC 1 cut(s) 280
PspGI CCWGG 4 cut(s) 1074, 1271, 1664, 1690
PspN4I GGNNCC 4 cut(s) 434, 896, 1511, 3687
PspOMI GGGCCC 2 cut(s) 432, 894
PspPI GGNCC 9 cut(s) 432, 433, 872, 882, 894, 895, 1260, 3215, 3871
PspPPI RGGWCCY 2 cut(s) 1260, 3215
PstI CTGCAG 3 cut(s) 2920, 3311, 3608
PstNI CAGNNNCTG 2 cut(s) 1333, 2162
PsyI GACNNNGTC 2 cut(s) 855, 1552
RsaI GTAC 6 cut(s) 503, 1375, 1466, 1670, 1941, 3327
RsaNI GTAC 6 cut(s) 502, 1374, 1465, 1669, 1940, 3326
RseI CAYNNNNRTG 5 cut(s) 248, 1989, 2203, 2697, 3746
SacI GAGCTC 3 cut(s) 1020, 1502, 2739
SalI GTCGAC 1 cut(s) 1582
Sau3AI GATC 8 cut(s) 300, 1065, 1477, 1777, 1795, 3055, 3372, 3846
Sau96I GGNCC 9 cut(s) 432, 433, 872, 882, 894, 895, 1260, 3215, 3871
ScaI AGTACT 1 cut(s) 1466
SchI GAGTC 4 cut(s) 1173, 1713, 3324, 3546
ScrFI CCNGG 9 cut(s) 870, 875, 876, 892, 893, 1076, 1273, 1666, 1692
SfaNI GCATC 5 cut(s) 547, 823, 1225, 2207, 2863
SfcI CTRYAG 5 cut(s) 570, 996, 2916, 3307, 3604
SfuI TTCGAA 2 cut(s) 478, 2220
SinI GGWCC 4 cut(s) 882, 1260, 3215, 3871
SmaI CCCGGG 2 cut(s) 876, 893
SmiMI CAYNNNNRTG 5 cut(s) 248, 1989, 2203, 2697, 3746
SmlI CTYRAG 4 cut(s) 1406, 1520, 2056, 2482
SmoI CTYRAG 4 cut(s) 1406, 1520, 2056, 2482
SnaBI TACGTA 1 cut(s) 1672
SpeI ACTAGT 1 cut(s) 1138
SphI GCATGC 1 cut(s) 668
SsiI CCGC 9 cut(s) 880, 898, 926, 1530, 1836, 2258, 2718, 3874, 3896
SspI AATATT 3 cut(s) 1242, 2657, 3081
SspMI CTAG 7 cut(s) 164, 1139, 2315, 2706, 3002, 3035, 3279
SstI GAGCTC 3 cut(s) 1020, 1502, 2739
StyD4I CCNGG 9 cut(s) 868, 873, 874, 890, 891, 1074, 1271, 1664, 1690
StyI CCWWGG 2 cut(s) 1473, 3689
TaaI ACNGT 8 cut(s) 910, 952, 1099, 1132, 1366, 2158, 2809, 3439
TaiI ACGT 6 cut(s) 1106, 1674, 2236, 2597, 2687, 2993
TatI WGTACW 1 cut(s) 1464
TauI GCSGC 1 cut(s) 1839
TfiI GAWTC 8 cut(s) 226, 388, 405, 1768, 1998, 2128, 2852, 3300
TscAI CASTG 6 cut(s) 465, 991, 1018, 1102, 1627, 3395
TseFI GTSAC 6 cut(s) 861, 1099, 1595, 1982, 1991, 3067
Tsp45I GTSAC 6 cut(s) 861, 1099, 1595, 1982, 1991, 3067
TspGWI ACGGA 3 cut(s) 457, 2818, 3628
TspMI CCCGGG 2 cut(s) 874, 891
TspRI CASTG 6 cut(s) 465, 991, 1018, 1102, 1627, 3395
Tth111I GACNNNGTC 2 cut(s) 855, 1552
Van91I CCANNNNNTGG 1 cut(s) 460
Vha464I CTTAAG 2 cut(s) 1520, 2482
VpaK11BI GGWCC 4 cut(s) 882, 1260, 3215, 3871
VspI ATTAAT 2 cut(s) 95, 1161
XagI CCTNNNNNAGG 1 cut(s) 2867
XbaI TCTAGA 1 cut(s) 3034
XceI RCATGY 3 cut(s) 247, 668, 3410
XcmI CCANNNNNNNNNTGG 2 cut(s) 457, 3865
XmaI CCCGGG 2 cut(s) 874, 891
XmiI GTMKAC 1 cut(s) 1583
XmnI GAANNNNTTC 1 cut(s) 2856
XspI CTAG 7 cut(s) 164, 1139, 2315, 2706, 3002, 3035, 3279
ZrmI AGTACT 1 cut(s) 1466
Zsp2I ATGCAT 1 cut(s) 3383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.