pycom808g00030

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00000808
OG0000158
Physical Location & Seq
Forward (+)
11278 .. 14425
3148 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom808g00030.17

Sequence Viewer

Length: 2208 bp
ATGAATGTGATTTGCTTATCTAAGTTATTAAAACTGGCTTATGTATGTGGTGTAGGAGGGTTTCACGTAATTGTTATTCACTTATACTCACAAGTAGTGGAGGTTGCTAGTCACAATCGCTTTTCACAAAGCTTAATGACTTTTGATATGTATCTTTGTTATGCATCTCATATAAAGAACTTGAAAAAGATAATTTGGTTAGTTAGTTGTGCGATGCAACTAATTTGGGGCGTTGTCATTCGTACCTTTTACCCATTTGTTCTACCTAAATTCGTTTTTCAAAAGTGTTTTCTACTAAGTTTTTGTTTTGAGTCTAAAATTCGTCAAAAACAATCCCCATGTTATTTAGTCTTCATATTTGAGTCAAAACTTGTTTTCCTTGAGTCTTTTGAGTCTAGTCAAGTCCTATTTTCGTCCAAAACCTTTATTGAGTCTAAAAGTGATGTTTTTGAGTCTTATTTACATAGATTAGCATCCCTAGTTAATCCCCGGTCTAGAACGATCCCTACTTACATATCTACTACAATTGTCACAAATAGGGTGAGACCTATCCCGAGGACGAGCGCGGTCACTCGAGGCAAGGGGGTTACGACCCTTCTACATACCAGTGAGTGGGCTTTTGGTTTTCCGTATATACCTATATACTTATACTTTTCCCAGAAACTAATATGTGTGTGTTGGTGCTGTGGACGCACAGGTAAGTGCCAGATGCATAGAGAGCTCATAACCTGCACCCTCGGTGTCCTTCACGTGATGTTCACCTCCCGCACTACACACTCATCTTGGATCCAAGTGACCCGCGATTATTCGCCCAGCCTTCACGTGATCGTAGCACTTGAGCGTACTTATATTACACCCAGTCTTGTCGTACAGACCACTCTAGGTGGTTCCGACTCGTGTGCAGGTATAGTTAGTGAGATGGAGATTTTAGCTCTAGATTCAGCCGTACAGCACTTGCATTTTACTTCGAGGCTTTTGGCATGGCATATTTCTGAGCATGACTTATATATATGTATATCCTATTTTTCTGGGAAGAACTGGTTTTTGAAAAGCCTTGTTTTTGCCCACTCACACTTTTTGTTTTGCGCCCCTCCAAGTTCTAGTAGGCAAGCACTTTTGGTGGCTCCCCAGAGGATTTTCCCGGCTTATCTGACAAATTATCACCAATGTAGGACCACCTTTGGGTGTGTTTTTGTAGTATTATTTCTTCCGGACTGCATTAGGTCTTCGTGCTCTGAACTTTGTTTTTCACACTTACGCTTGCACATGTATGTTCTTACTTTGTGTAAAGCTGGTTTTTATTTATTCGTACTTTTATTATTATTTATTTACACCCATCATGGGATTGCTCTAGCCCCCTTCTCGCTTAACTTCGAAGTTTCGATGAACTTTGAAGCCAGTGATCTCCCAAAAGGCCTCGTGCTAGGTAGGGATGAGAATATACATTTAAGGATCACTCCCCTTAGTGATGTGGGATGTTACAATCCACCCCCCTTGGGGGCCCAACGTCCTCGTTGGCCCTGGGCCGGGGCGTATCATTTCCCGAGCCCGCTACACCACTGTAGCACGATATTGTCTGCTTTGGGCTTACCATTCCCTCACGGTTTTGTTTTTGGGAACTCACGAGCAACTTCCCAGTGGGTCACCCATCATGGGATTGCTCTAGCCCCCTTCTCGCTTAACTTCGAAGTTCCTACGGAACCCGAAGCCAGTGAATTTAAGGATCGCTCCCCTGGGCGATGTGGGATGTTACATACGGGGGTAAGTAGAGAAAGCTTAGGACACCTTATTTATACTAGAAAAACCTTCAGAGTAATGACACAAACTAGGAAAGAATCCTTCTTGGCTTGGGAAACACGTCATCTGTTTTGCAAGGCAGTTTTGGGGTCGATTTATCTTCTGGAAAATTCTTGCACGCCATTAGGAAAAATCGGGCAAAACTCCAAATCTTCATTCTCCCACAGCTGCGCAGTTCTGACGGGAAAACCATTTCAAGTTTTTGGCGGAAAGATATCATGTTGTTTTAACCGGCATCTACCGAGTTTTTATTATGTGAATTCCTTACCAACGTACCCTTGTCTCCAGGTGGCTGTAGTCTATGTTTATAAAAAGGAAATTTCAGGATTAAGAAAACCTGTTAAGTCACATTTTGCATGCATTTATATCTTCTTTATTTGGCATCTTTGTGATTGTTTTGGAGTAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

736

Amino Acids

83.48

Weight (kDa)

9.14

Isoelectric Point (pI)

41.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2106
Acc16I TGCGCA 1 cut(s) 1969
Acc36I ACCTGC 2 cut(s) 737, 893
AccB7I CCANNNNNTGG 1 cut(s) 612
AccII CGCG 2 cut(s) 566, 801
AccIII TCCGGA 1 cut(s) 1210
AciI CCGC 5 cut(s) 566, 766, 799, 1550, 2004
AclWI GGATC 5 cut(s) 496, 781, 794, 1460, 1731
AcsI RAATTY 6 cut(s) 269, 318, 1715, 1906, 2056, 2115
AcuI CTGAAG 1 cut(s) 1792
AcvI CACGTG 2 cut(s) 751, 823
AfaI GTAC 6 cut(s) 244, 844, 870, 948, 1311, 2072
AfiI CCNNNNNNNGG 9 cut(s) 612, 1182, 1341, 1496, 1497, 1498, 1526, 1527, 1653
AflIII ACRYGT 2 cut(s) 1266, 1856
AgsI TTSAA 5 cut(s) 184, 281, 1048, 1394, 1994
AjiI CACGTC 1 cut(s) 1859
AjnI CCWGG 3 cut(s) 1520, 1732, 2082
AjuI GAANNNNNNNTTGG 2 cut(s) 1937, 1969
AluBI AGCT 6 cut(s) 132, 721, 932, 1292, 1776, 1965
AluI AGCT 6 cut(s) 132, 721, 932, 1292, 1776, 1965
Alw21I GWGCWC 2 cut(s) 723, 1235
Alw26I GTCTC 2 cut(s) 538, 2084
AlwI GGATC 5 cut(s) 496, 781, 794, 1460, 1731
Ama87I CYCGRG 3 cut(s) 553, 573, 1543
Aor13HI TCCGGA 1 cut(s) 1210
AoxI GGCC 4 cut(s) 1414, 1500, 1517, 1524
ApaI GGGCCC 1 cut(s) 1504
ApeKI GCWGC 1 cut(s) 1965
ApoI RAATTY 6 cut(s) 269, 318, 1715, 1906, 2056, 2115
AspLEI GCGC 3 cut(s) 566, 1088, 1970
AspS9I GGNCC 5 cut(s) 1173, 1500, 1501, 1518, 1524
AsuC2I CCSGG 3 cut(s) 490, 1142, 1528
AsuHPI GGTGA 4 cut(s) 553, 751, 1154, 1636
AsuII TTCGAA 2 cut(s) 1374, 1686
AvaI CYCGRG 3 cut(s) 553, 573, 1543
AvaII GGWCC 1 cut(s) 1173
BaeGI GKGCMC 1 cut(s) 1504
BaeI ACNNNNGTAYC 2 cut(s) 2054, 2087
BamHI GGATCC 1 cut(s) 786
BanII GRGCYC 3 cut(s) 723, 1504, 1550
BarI GAAGNNNNNNTAC 2 cut(s) 1191, 1223
BauI CACGAG 3 cut(s) 895, 1418, 1623
BbrPI CACGTG 2 cut(s) 751, 823
BbsI GAAGAC 2 cut(s) 343, 1218
Bbv12I GWGCWC 2 cut(s) 723, 1235
BbvI GCAGC 1 cut(s) 1952
BccI CCATC 3 cut(s) 913, 1344, 1656
BceAI ACGGC 1 cut(s) 929
BcgI CGANNNNNNTGC 2 cut(s) 881, 915
BciT130I CCWGG 3 cut(s) 1522, 1734, 2084
BcnI CCSGG 3 cut(s) 490, 1142, 1528
BcoDI GTCTC 2 cut(s) 538, 2084
BfmI CTRYAG 2 cut(s) 1561, 2091
BfuAI ACCTGC 2 cut(s) 737, 893
BisI GCNGC 1 cut(s) 1966
BlsI GCNGC 1 cut(s) 1967
Bme1390I CCNGG 6 cut(s) 490, 1142, 1522, 1528, 1734, 2084
Bme18I GGWCC 1 cut(s) 1173
BmeT110I CYCGRG 3 cut(s) 553, 573, 1543
BmgBI CACGTC 1 cut(s) 1859
BmgT120I GGNCC 5 cut(s) 1173, 1500, 1501, 1518, 1524
BmiI GGNNCC 6 cut(s) 788, 889, 1125, 1501, 1502, 1701
BmrFI CCNGG 6 cut(s) 490, 1142, 1522, 1528, 1734, 2084
BmrI ACTGGG 2 cut(s) 852, 1630
BmsI GCATC 6 cut(s) 173, 204, 482, 699, 2041, 2188
BmuI ACTGGG 2 cut(s) 852, 1630
BpiI GAAGAC 2 cut(s) 343, 1218
BpmI CTGGAG 1 cut(s) 2066
Bpu10I CCTNAGC 1 cut(s) 1777
Bpu14I TTCGAA 2 cut(s) 1374, 1686
BpuEI CTTGAG 2 cut(s) 401, 857
BpuMI CCSGG 3 cut(s) 490, 1142, 1528
BsaAI YACGTR 3 cut(s) 67, 751, 823
BsaBI GATNNNNATC 2 cut(s) 150, 472
BsaI GGTCTC 1 cut(s) 538
BsaJI CCNNGG 9 cut(s) 488, 554, 736, 1494, 1520, 1521, 1527, 1732, 1733
BsaWI WCCGGW 1 cut(s) 1210
Bsc4I CCNNNNNNNGG 9 cut(s) 612, 1182, 1341, 1496, 1497, 1498, 1526, 1527, 1653
Bse118I RCCGGY 1 cut(s) 2028
Bse1I ACTGG 7 cut(s) 39, 606, 858, 1043, 1398, 1636, 1710
Bse8I GATNNNNATC 2 cut(s) 150, 472
BseAI TCCGGA 1 cut(s) 1210
BseBI CCWGG 3 cut(s) 1522, 1734, 2084
BseDI CCNNGG 9 cut(s) 488, 554, 736, 1494, 1520, 1521, 1527, 1732, 1733
BseGI GGATG 4 cut(s) 473, 1438, 1481, 1752
BseJI GATNNNNATC 2 cut(s) 150, 472
BseLI CCNNNNNNNGG 9 cut(s) 612, 1182, 1341, 1496, 1497, 1498, 1526, 1527, 1653
BseMII CTCAG 1 cut(s) 984
BseNI ACTGG 7 cut(s) 39, 606, 858, 1043, 1398, 1636, 1710
BseSI GKGCMC 1 cut(s) 1504
BseXI GCAGC 1 cut(s) 1952
BseYI CCCAGC 1 cut(s) 812
BsgI GTGCAG 2 cut(s) 715, 921
Bsh1236I CGCG 2 cut(s) 566, 801
BshFI GGCC 4 cut(s) 1416, 1502, 1519, 1526
BsiHKAI GWGCWC 2 cut(s) 723, 1235
BsiHKCI CYCGRG 3 cut(s) 553, 573, 1543
BsiSI CCGG 5 cut(s) 490, 1142, 1211, 1527, 2029
BslI CCNNNNNNNGG 9 cut(s) 612, 1182, 1341, 1496, 1497, 1498, 1526, 1527, 1653
BsmAI GTCTC 2 cut(s) 538, 2084
BsnI GGCC 4 cut(s) 1416, 1502, 1519, 1526
Bso31I GGTCTC 1 cut(s) 538
BsoBI CYCGRG 3 cut(s) 553, 573, 1543
Bsp119I TTCGAA 2 cut(s) 1374, 1686
Bsp120I GGGCCC 1 cut(s) 1500
Bsp1286I GDGCHC 4 cut(s) 723, 1235, 1504, 1550
Bsp13I TCCGGA 1 cut(s) 1210
Bsp143I GATC 6 cut(s) 501, 786, 825, 1402, 1452, 1723
BspACI CCGC 5 cut(s) 566, 766, 799, 1550, 2004
BspANI GGCC 4 cut(s) 1416, 1502, 1519, 1526
BspCNI CTCAG 1 cut(s) 985
BspEI TCCGGA 1 cut(s) 1210
BspFNI CGCG 2 cut(s) 566, 801
BspLI GGNNCC 6 cut(s) 788, 889, 1125, 1501, 1502, 1701
BspMI ACCTGC 2 cut(s) 737, 893
BspPI GGATC 5 cut(s) 496, 781, 794, 1460, 1731
BspT104I TTCGAA 2 cut(s) 1374, 1686
BspTNI GGTCTC 1 cut(s) 538
BsrFI RCCGGY 1 cut(s) 2028
BsrI ACTGG 7 cut(s) 39, 606, 858, 1043, 1398, 1636, 1710
BssAI RCCGGY 1 cut(s) 2028
BssECI CCNNGG 9 cut(s) 488, 554, 736, 1494, 1520, 1521, 1527, 1732, 1733
BssMI GATC 6 cut(s) 501, 786, 825, 1402, 1452, 1723
BssSI CACGAG 3 cut(s) 895, 1418, 1623
BssT1I CCWWGG 1 cut(s) 1494
Bst2BI CACGAG 3 cut(s) 895, 1418, 1623
Bst2UI CCWGG 3 cut(s) 1522, 1734, 2084
Bst4CI ACNGT 2 cut(s) 1562, 1604
BstBAI YACGTR 3 cut(s) 67, 751, 823
BstBI TTCGAA 2 cut(s) 1374, 1686
BstC8I GCNNGC 5 cut(s) 1110, 1262, 1550, 1916, 2155
BstDEI CTNAG 5 cut(s) 21, 296, 993, 1463, 1777
BstEII GGTNACC 1 cut(s) 1642
BstF5I GGATG 4 cut(s) 473, 1438, 1481, 1752
BstFNI CGCG 2 cut(s) 566, 801
BstHHI GCGC 3 cut(s) 566, 1088, 1970
BstKTI GATC 6 cut(s) 504, 789, 828, 1405, 1455, 1726
BstMAI GTCTC 2 cut(s) 538, 2084
BstMBI GATC 6 cut(s) 501, 786, 825, 1402, 1452, 1723
BstMWI GCNNNNNNNGC 2 cut(s) 690, 718
BstNI CCWGG 3 cut(s) 1522, 1734, 2084
BstNSI RCATGY 2 cut(s) 1270, 2157
BstPI GGTNACC 1 cut(s) 1642
BstSCI CCNGG 6 cut(s) 488, 1140, 1520, 1526, 1732, 2082
BstSFI CTRYAG 2 cut(s) 1561, 2091
BstSLI GKGCMC 1 cut(s) 1504
BstUI CGCG 2 cut(s) 566, 801
BstV1I GCAGC 1 cut(s) 1952
BstV2I GAAGAC 2 cut(s) 343, 1218
BstX2I RGATCY 1 cut(s) 786
BstYI RGATCY 1 cut(s) 786
BsuRI GGCC 4 cut(s) 1416, 1502, 1519, 1526
BtgZI GCGATG 2 cut(s) 227, 1753
BtrI CACGTC 1 cut(s) 1859
BtsCI GGATG 4 cut(s) 473, 1438, 1481, 1752
BtsIMutI CAGTG 5 cut(s) 613, 1405, 1558, 1643, 1717
BveI ACCTGC 2 cut(s) 737, 893
Cac8I GCNNGC 5 cut(s) 1110, 1262, 1550, 1916, 2155
CfoI GCGC 3 cut(s) 566, 1088, 1970
Cfr10I RCCGGY 1 cut(s) 2028
Cfr13I GGNCC 5 cut(s) 1173, 1500, 1501, 1518, 1524
CseI GACGC 1 cut(s) 699
Csp6I GTAC 6 cut(s) 243, 843, 869, 947, 1310, 2071
CspCI CAANNNNNGTGG 2 cut(s) 1476, 1511
CviAII CATG 8 cut(s) 339, 981, 998, 1267, 1340, 1652, 2016, 2154
CviQI GTAC 6 cut(s) 243, 843, 869, 947, 1310, 2071
DdeI CTNAG 5 cut(s) 21, 296, 993, 1463, 1777
DpnI GATC 6 cut(s) 503, 788, 827, 1404, 1454, 1725
DpnII GATC 6 cut(s) 501, 786, 825, 1402, 1452, 1723
EciI GGCGGA 1 cut(s) 2019
Ecl136II GAGCTC 1 cut(s) 721
Eco130I CCWWGG 1 cut(s) 1494
Eco147I AGGCCT 1 cut(s) 1416
Eco24I GRGCYC 3 cut(s) 723, 1504, 1550
Eco31I GGTCTC 1 cut(s) 538
Eco32I GATATC 1 cut(s) 2013
Eco47I GGWCC 1 cut(s) 1173
Eco53kI GAGCTC 1 cut(s) 721
Eco57I CTGAAG 1 cut(s) 1792
Eco72I CACGTG 2 cut(s) 751, 823
Eco88I CYCGRG 3 cut(s) 553, 573, 1543
Eco91I GGTNACC 1 cut(s) 1642
EcoICRI GAGCTC 1 cut(s) 721
EcoO109I RGGNCCY 1 cut(s) 1500
EcoO65I GGTNACC 1 cut(s) 1642
EcoRI GAATTC 1 cut(s) 2056
EcoRII CCWGG 3 cut(s) 1520, 1732, 2082
EcoRV GATATC 1 cut(s) 2013
EcoT14I CCWWGG 1 cut(s) 1494
EcoT22I ATGCAT 3 cut(s) 166, 714, 2159
EcoT38I GRGCYC 3 cut(s) 723, 1504, 1550
ErhI CCWWGG 1 cut(s) 1494
FaeI CATG 8 cut(s) 342, 984, 1001, 1270, 1343, 1655, 2019, 2157
FatI CATG 8 cut(s) 338, 980, 997, 1266, 1339, 1651, 2015, 2153
FauI CCCGC 3 cut(s) 773, 806, 1557
Fnu4HI GCNGC 1 cut(s) 1966
FokI GGATG 4 cut(s) 460, 1445, 1488, 1759
FriOI GRGCYC 3 cut(s) 723, 1504, 1550
Fsp4HI GCNGC 1 cut(s) 1966
FspI TGCGCA 1 cut(s) 1969
GlaI GCGC 3 cut(s) 565, 1087, 1969
GluI GCNGC 1 cut(s) 1966
GsaI CCCAGC 1 cut(s) 816
GsuI CTGGAG 1 cut(s) 2066
HaeIII GGCC 4 cut(s) 1416, 1502, 1519, 1526
HapII CCGG 5 cut(s) 490, 1142, 1211, 1527, 2029
HgaI GACGC 1 cut(s) 699
HhaI GCGC 3 cut(s) 566, 1088, 1970
Hin1II CATG 8 cut(s) 342, 984, 1001, 1270, 1343, 1655, 2019, 2157
Hin6I GCGC 3 cut(s) 564, 1086, 1968
HinP1I GCGC 3 cut(s) 564, 1086, 1968
HindIII AAGCTT 2 cut(s) 130, 1774
HinfI GANTC 9 cut(s) 311, 362, 383, 392, 431, 452, 893, 938, 1835
HpaII CCGG 5 cut(s) 490, 1142, 1211, 1527, 2029
HphI GGTGA 4 cut(s) 553, 751, 1154, 1636
Hpy166II GTNNAC 3 cut(s) 689, 759, 2203
Hpy188I TCNGA 6 cut(s) 892, 994, 1152, 1237, 1811, 1977
Hpy188III TCNNGA 8 cut(s) 495, 553, 935, 1211, 1543, 1623, 1901, 2121
Hpy8I GTNNAC 3 cut(s) 689, 759, 2203
HpyAV CCTTC 7 cut(s) 605, 755, 827, 1369, 1681, 1816, 1849
HpyCH4III ACNGT 2 cut(s) 1562, 1604
HpyCH4IV ACGT 6 cut(s) 66, 750, 822, 1507, 1858, 2069
HpyF10VI GCNNNNNNNGC 2 cut(s) 690, 718
HpyF3I CTNAG 5 cut(s) 21, 296, 993, 1463, 1777
HpySE526I ACGT 6 cut(s) 66, 750, 822, 1507, 1858, 2069
Hsp92II CATG 8 cut(s) 342, 984, 1001, 1270, 1343, 1655, 2019, 2157
HspAI GCGC 3 cut(s) 564, 1086, 1968
Kpn2I TCCGGA 1 cut(s) 1210
Kzo9I GATC 6 cut(s) 501, 786, 825, 1402, 1452, 1723
LmnI GCTCC 2 cut(s) 1129, 1733
Lsp1109I GCAGC 1 cut(s) 1952
LweI GCATC 6 cut(s) 173, 204, 482, 699, 2041, 2188
MaeII ACGT 6 cut(s) 66, 750, 822, 1507, 1858, 2069
MaeIII GTNAC 9 cut(s) 110, 529, 568, 586, 793, 1478, 1642, 1749, 2142
MalI GATC 6 cut(s) 503, 788, 827, 1404, 1454, 1725
MboI GATC 6 cut(s) 501, 786, 825, 1402, 1452, 1723
MboII GAAGA 7 cut(s) 343, 1045, 1199, 1218, 1889, 1941, 2158
MfeI CAATTG 1 cut(s) 525
MflI RGATCY 1 cut(s) 786
MhlI GDGCHC 4 cut(s) 723, 1235, 1504, 1550
MlyI GAGTC 7 cut(s) 320, 371, 392, 401, 440, 461, 887
MmeI TCCRAC 1 cut(s) 915
Mph1103I ATGCAT 3 cut(s) 166, 714, 2159
MroI TCCGGA 1 cut(s) 1210
MslI CAYNNNNRTG 3 cut(s) 606, 1269, 2184
MspA1I CMGCKG 1 cut(s) 1965
MspI CCGG 5 cut(s) 490, 1142, 1211, 1527, 2029
MspR9I CCNGG 6 cut(s) 490, 1142, 1522, 1528, 1734, 2084
MunI CAATTG 1 cut(s) 525
MvaI CCWGG 3 cut(s) 1522, 1734, 2084
MvnI CGCG 2 cut(s) 566, 801
MwoI GCNNNNNNNGC 2 cut(s) 690, 718
NciI CCSGG 3 cut(s) 490, 1142, 1528
NdeII GATC 6 cut(s) 501, 786, 825, 1402, 1452, 1723
NlaIII CATG 8 cut(s) 342, 984, 1001, 1270, 1343, 1655, 2019, 2157
NlaIV GGNNCC 6 cut(s) 788, 889, 1125, 1501, 1502, 1701
NmuCI GTSAC 6 cut(s) 110, 529, 568, 793, 1642, 2142
NsbI TGCGCA 1 cut(s) 1969
NsiI ATGCAT 3 cut(s) 166, 714, 2159
NspI RCATGY 2 cut(s) 1270, 2157
NspV TTCGAA 2 cut(s) 1374, 1686
PaeI GCATGC 1 cut(s) 2157
PaeR7I CTCGAG 1 cut(s) 573
PasI CCCWGGG 2 cut(s) 1521, 1733
PceI AGGCCT 1 cut(s) 1416
PciI ACATGT 1 cut(s) 1266
PfeI GAWTC 2 cut(s) 938, 1835
PflMI CCANNNNNTGG 1 cut(s) 612
PkrI GCNGC 1 cut(s) 1967
PleI GAGTC 7 cut(s) 319, 370, 391, 400, 439, 460, 887
PmaCI CACGTG 2 cut(s) 751, 823
PmlI CACGTG 2 cut(s) 751, 823
PpsI GAGTC 7 cut(s) 319, 370, 391, 400, 439, 460, 887
Ppu21I YACGTR 3 cut(s) 67, 751, 823
PscI ACATGT 1 cut(s) 1266
PsiI TTATAA 1 cut(s) 2106
Psp124BI GAGCTC 1 cut(s) 723
Psp6I CCWGG 3 cut(s) 1520, 1732, 2082
PspCI CACGTG 2 cut(s) 751, 823
PspEI GGTNACC 1 cut(s) 1642
PspFI CCCAGC 1 cut(s) 812
PspGI CCWGG 3 cut(s) 1520, 1732, 2082
PspN4I GGNNCC 6 cut(s) 788, 889, 1125, 1501, 1502, 1701
PspOMI GGGCCC 1 cut(s) 1500
PspPI GGNCC 5 cut(s) 1173, 1500, 1501, 1518, 1524
PspXI VCTCGAGB 1 cut(s) 573
PsrI GAACNNNNNNTAC 2 cut(s) 490, 522
PsuI RGATCY 1 cut(s) 786
PvuII CAGCTG 1 cut(s) 1965
RsaI GTAC 6 cut(s) 244, 844, 870, 948, 1311, 2072
RsaNI GTAC 6 cut(s) 243, 843, 869, 947, 1310, 2071
RseI CAYNNNNRTG 3 cut(s) 606, 1269, 2184
SacI GAGCTC 1 cut(s) 723
SatI GCNGC 1 cut(s) 1966
Sau3AI GATC 6 cut(s) 501, 786, 825, 1402, 1452, 1723
Sau96I GGNCC 5 cut(s) 1173, 1500, 1501, 1518, 1524
SchI GAGTC 7 cut(s) 320, 371, 392, 401, 440, 461, 887
ScrFI CCNGG 6 cut(s) 490, 1142, 1522, 1528, 1734, 2084
SduI GDGCHC 4 cut(s) 723, 1235, 1504, 1550
SfaNI GCATC 6 cut(s) 173, 204, 482, 699, 2041, 2188
SfcI CTRYAG 2 cut(s) 1561, 2091
Sfr274I CTCGAG 1 cut(s) 573
SfuI TTCGAA 2 cut(s) 1374, 1686
SinI GGWCC 1 cut(s) 1173
SlaI CTCGAG 1 cut(s) 573
SmiMI CAYNNNNRTG 3 cut(s) 606, 1269, 2184
SmlI CTYRAG 3 cut(s) 380, 573, 836
SmoI CTYRAG 3 cut(s) 380, 573, 836
SphI GCATGC 1 cut(s) 2157
SseBI AGGCCT 1 cut(s) 1416
SsiI CCGC 5 cut(s) 566, 766, 799, 1550, 2004
SstI GAGCTC 1 cut(s) 723
StuI AGGCCT 1 cut(s) 1416
StyD4I CCNGG 6 cut(s) 488, 1140, 1520, 1526, 1732, 2082
StyI CCWWGG 1 cut(s) 1494
TaaI ACNGT 2 cut(s) 1562, 1604
TaiI ACGT 6 cut(s) 69, 753, 825, 1510, 1861, 2072
TaqI TCGA 6 cut(s) 574, 968, 1374, 1382, 1686, 1889
TfiI GAWTC 2 cut(s) 938, 1835
TscAI CASTG 5 cut(s) 613, 1405, 1565, 1643, 1717
TseFI GTSAC 6 cut(s) 110, 529, 568, 793, 1642, 2142
TseI GCWGC 1 cut(s) 1965
Tsp45I GTSAC 6 cut(s) 110, 529, 568, 793, 1642, 2142
TspDTI ATGAA 4 cut(s) 17, 343, 1400, 1941
TspGWI ACGGA 2 cut(s) 618, 1712
TspRI CASTG 5 cut(s) 613, 1405, 1565, 1643, 1717
Van91I CCANNNNNTGG 1 cut(s) 612
VpaK11BI GGWCC 1 cut(s) 1173
XapI RAATTY 6 cut(s) 269, 318, 1715, 1906, 2056, 2115
XbaI TCTAGA 2 cut(s) 494, 934
XceI RCATGY 2 cut(s) 1270, 2157
XhoI CTCGAG 1 cut(s) 573
Zsp2I ATGCAT 3 cut(s) 166, 714, 2159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.