pycom05g08100

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
10828205 .. 10835241
7037 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g08100.13

Sequence Viewer

Length: 4935 bp
ATGGTTGGTGAAATAAAACACAAATTTAATTTTTGTTCACTTCAGCCACTTAGTGTTACGGTTCGATTCTTGCCAAAGACGAATTTGAAATACATTAATATGGCTAATAATATCATTTGTTTTAAGAAAAAAAAATTGTTCACGTCCTTAGGACCTACCATTTTACTATCTCCCAACAAGAAAAATGACTTGATTGAAGAAAGTTTTGAATTCAAATTTGATGGTGAAAGTCCAATGTGGGTGGGTGTACATACTTATGATAGAGAGGGCTATAATATTGGTAAGAAAATGACACATTTTGTCATCTCTTTTTCTATTTGTCCATATCCATTTGGTGCTATATATTTGTTGAAAGTTGACAGCCACTCGACGCATCTTAATAATTCTTCTAGTTTAACAATGTCAGAATCTGGCATTGATGTTAACAAAGTGGTGAAGATACCCAACATGGTGTCTCTTTGGCCATGGAACAAAACTAGCGGCACACATCATCCTGGAAGGGGACGCATTTCAGGTTGTCCAAGCCATTGGCACCTTCGACGCTTTGTTGATTCTAAAGTCAGTCATGTATGCAAATACGCCAATGTAGCAGTTCATCGAATGGTTAAATTGACCTTATTTTTAGATTTTTTTTCAGTTTTTAGTTTGAGGAGAGTCCTGATTTACTTCAGAATTCTTTCGTGTTTTTTTTTTAATTTTTTTAATTTTTTAAATGGGAGTGGTCAAGAATGGTCATCTAATATTGGTAGAATAATATTCATGGCGGGGCCCCCATCCACTAAGTCACCAACCCACCAACGCTTTTTCACTTTTTTTTTTAAACTTTTAAATGTCATATCTATCTATCTTATTTTATTTTTTAAACATATTTTTAATTTTTGGCTTATCAAAGGATGTGTAAGAAATAAAATGAGATATGTGGCTAAGGCATCAATATTTTTCATCAAGTTTATTCACCGAAAATTCCAAATTAATGTTGTTGTACACATGGTTAGAGGCTTATTTGTTGGAAATAACTCAAGCGGAAACTTAGTGAAAAAGGTTAATGTCTATAGTATTACTCTAATTATATATGTCAATAGTGCTACTGATTACGCTTGTTGGATCACCATTGCGGAGACGGAAATCATGAGCATCTTAAATGAGATATGTTGGTTAACCAAAAAACACATCAATGAAAGGATGTCAAATATTCATCTTGTTTTTTTTTATTTCAGTCCCAACTTTGGACTAGTTATGTATAAGAATAAAATCTATATTGTAATAAGTTATAATTTTTCTTTGTCCCATCTAAAAGAAACACACCTCCATATAATTATAATTTTATTGATCTTGGGTGGCAAGGCTGCTTTGATAAAGGGAATAGGAAAGGTATTTAACCCACTTTATATGTGGAACGGGGCTTTGGCCATCAAACAACAAGGCCTTGGAGTACAAGTAAAGAAAGAATATATTAACCCACTTTATATGTGGAACGGGGCTTTGGCCATCAAACAACAAGGCCTTGGAGTACAAGTAAAGAAAGAATATATGTATTTTTTAGCTACACCTCTGTTAAGTAATAACCTCCTTAAAGAAGACCCGACCCTAACTTTGTTCCTATGTCAACTTTTGAGCTCATTTCATATTTTGTCCCATTTCTTTCCATATTCTTGTAGTACTCTAGCTAAAATGAAGATTTTACAAAGTACGGAGCATCAGAGGCAAAATAATAATTTTCCTCATGGGACTGTTTTGGAAAATAATTATTTTCTATTTAGGAAAATATCCCGTTGTCTTTTTTTTAAGGTGTACTTGTATTTAAACAAACATTTCCCTTTCGGGAAATCATCCCATCGACAAACACAATCTCGGGAAATCATCCCATCGACAAACACAATCTCTCTCCCCGACTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCTTTTCCCCGAACCTCACAAGTCAATACCACCAAATTTTCCGACGAACTGAGCCACACGACCACCACCATCTTCTTCCTTTCATCACCACGAACTCGACCCTTGGTTTTGCGAGCCCACTTTCCCGGCAAGTTTTCACCATTTCTGACGAAGGTAAGGCTTTTGATCCGGTGGTCTCTTCCTTGGCAAACTTTTGACGTATATCGAAGACAATTTTCTCGTCTACAGTTGTTCGACCAGTGCACACGATTTTCTGAAATTGGGCTCAGTTTTGAGCAACCCGTGCTTGAATCTAAGCGGGTTAAAAACCTTGAATTTCGAGCTAAGAATTTCCTAACCTATTTCAAGGCTTTCCAGCCACTTTTGTGTTTTTGTGAAATTTGGTTGAATTTTTGGAAAAATTTTCTGCGAAATTTCCCAGTTTTTTGCGACATAGACGGTGGAGGCGGCACTTGCAACCAGATATTCCTAACAGCGTCAGGTAACACCGTAAACTTTAACGAAATATTCCGTTCAGTGACAAAGTATTTCATCCACTTTGGATGGCGTGTAGTGGCGCATGGCGGCGCTTGGGCCCTGTTTTTAACTCTGTCAACTCCTGTTTTGAGTAAACCAAGGGAATTTTTAAGTCTTTTCCTCTGTGTTTCCAAACTTAGTATAGTCAAAGTTAGAGAGATAACTTTTACTAGTGACAGGAGCGAAGCAGGTGTAAAATATTACACTATGATGTTCAGATTGATCTTTTCTTTCTTTCTGTTTTCTATATCTGTTGATAGCAGTCGGAGTGCTTTATTTATAGAGCAACTCTGTACTATTATATTTCCAAGTCCACATATCAACACTGCCAATGTTTTCATTCATCTGCTAATGTTGTTTTCAATATTATTGTGGGCATTCATTAACCCACTAGCATTTTCAACACTCCCCCTTGGATGCCCACATATGAACATTAGTTGTCTCATTAAAACCTTACTTGGAAAAACCCAGTTGGAAAAAAACCATAGCGAAGGAAAAAGATACAACTTTACTTGGATTGTTATTCTTATGTTCCTAATCGAAGGAAAAAGAGTACAACATGCATGTATCATGAATGCTCCCCCTGATATATATCTCCCTCTAATTCCGCATTCTCCAAATTTAGTTAGATTTGGTGAACAAATCTGCCAGATTTTCATTGGAACGGATTTGTCTGACTTCAATAACTTTAGCCTTCTGAAGCTCATGTGCACTGAAAAACTTTGGAGATATGTGTTTAGTCTTATCGCTCTTGATGAATCCTTCATTCATTTGGGCAACACAGGTTGCATTATCTACATGAATGACAGTTGGAGTGGATCATTGATCTTAACCAAGAACATTCACGACTTGCTTCATGTAAAGCAAGTATTTCTGAATGATTTGAAGATGTACCAGTTTGTGAGCGGACTTTATACGGATCAGAGAGAAAACCAACATCTTGCTAACAAGTTGACTGAACAAGCTATATGTGGTCTAGTACATTGTGCTAAATACAATAAGGTCACATCCTGGCCCGGGACGGATCACTTCCCTGGCCCGCTCTACTACCGTAGCACGATATTGTCCGCTTTGGGCTTACCATTCCCTTACGGTTTTGTTTTTGGGAACTCACGAGCAACTTCCCAGTGGGTCACCCATCATGGGATTGCTCTAGCCCCCTTCTCGGTTAACTTCGGAGTTCCTACGGAACCCGAAGCCAGTGAGTTCCCAAAAGGCCTCGTGCTAAGTAGGGATGAGAATATACATTTAAGATCGATCACTCCTCTGGGTGATGTGGGATGTTACAATCCACCCCCCTTAGGGGCACGACGTCCTCTTGTCACATCCCGGCCCAGGAGGGACCACTTCTTGGGTCCGCTCCACCACCGTAGCACGATATTGTCCGCTTTGGGCTTACCATTCCCTCACGGTTTTGTTTTTGGGAACTCACAAGCAACTTCCCAGTGGGTCACCCATCATGGGATTACTCTCGCGCACTACTCGCTTAACTTCGGAGTTCCTACGGAACCCGAAGCCAGTGAGTTCCCAAAAGGCCTCGTGCTAAGTAGGGATGAGAATATACATTTAAGGATCACTTCCCTGGGCGATGTGGGATGTTATAAAGGACCAGTTCATCATCTTCTTTTGGACGCTGAGTGGATAAGCCTTGTCCATACCAAATTACTTCATGATTTTTTTCAATGTAACTGCAAGCCGAGACAAAATTTTGTTTTTCCAAGGTCTTTCATTTCAAATTCGCTTTTCAGATATTCAACAATTTTATTGAGCTCTTCAAGGGTTCCAACTAGGTTCATATCATTGACATATACTGCCACTATGGCAAATCCAGAGTTGGATTTCTTAATGAACACACAAGGGCAAATGACATTGTTGATATATCCTTCTTTAATCAAATACTCACTGAGACGATTATACCACATTCGTCCAGATTGTTTCAGCCCATACAATGATCACCTTAATTTGATTGAGAGCATACCTCATGGTTTGTTAATTGTTTCAGGCAACTTATGTCATTTTGGGACTTTTATATACATTTCAGTATTTAATTCTCCATATAGATACGCGGTGATGACATCCATAATAAAGAAACATAATTGCGTCCATTACAGGGGAGTATGTCTCCTCATAATCAATTCCACGTCTTTGCGAAAAGCCTTGTTTAATGAGTCGTGCTTTATATCTTGTAATTCGTTTTTCTCATTGCGCGGGGTTTGGACTATTGGTCCAAAAACATTTCGCCTTTCCAAGGAATTTAATTCTGTCTGGATTGATTTCAATGGCTACCACGAATGCGAACATGTCGTTGATGATTATTTCATTCTGATCCCACAATTCATTAGTACAAGCATAATTTATGGAGATTTCTTTGCTTTCATGTACCTCTGTTACTTCAGGTACATATGTCTCATCAAGGACATTTTTTTTCTTCTGAAAGTACAGAATCATGAATTGTGGATGAATCATTCATTTTTTGTTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1645

Amino Acids

189.58

Weight (kDa)

9.52

Isoelectric Point (pI)

41.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1272, 1319, 4053
AarI CACCTGC 1 cut(s) 2630
AatII GACGTC 1 cut(s) 3766
Acc36I ACCTGC 1 cut(s) 2630
AccB1I GGYRCC 1 cut(s) 531
AccB7I CCANNNNNTGG 1 cut(s) 3802
AccBSI CCGCTC 3 cut(s) 3357, 3493, 3811
AccI GTMKAC 1 cut(s) 2158
AccII CGCG 3 cut(s) 3926, 4517, 4659
AclWI GGATC 7 cut(s) 1112, 2095, 3277, 3378, 3483, 4031, 4771
AcoI YGGCCR 3 cut(s) 461, 1407, 1485
AcuI CTGAAG 4 cut(s) 26, 652, 3170, 4828
AcyI GRCGYC 1 cut(s) 3763
AdeI CACNNNGTG 1 cut(s) 53
AflIII ACRYGT 1 cut(s) 4750
AhdI GACNNNNNGTC 1 cut(s) 4674
AhlI ACTAGT 2 cut(s) 1231, 2621
AjiI CACGTC 2 cut(s) 144, 4593
AjnI CCWGG 5 cut(s) 493, 3461, 3484, 3785, 4032
AjuI GAANNNNNNNTTGG 4 cut(s) 1388, 1420, 1466, 1498
AleI CACNNNNGTG 1 cut(s) 2299
AluBI AGCT 7 cut(s) 1544, 1617, 1667, 2258, 3154, 3416, 4221
AluI AGCT 7 cut(s) 1544, 1617, 1667, 2258, 3154, 3416, 4221
Alw21I GWGCWC 4 cut(s) 1619, 2180, 3164, 4223
Alw26I GTCTC 8 cut(s) 459, 1112, 2115, 2897, 4144, 4351, 4577, 4862
Alw44I GTGCAC 2 cut(s) 2176, 3160
AlwI GGATC 7 cut(s) 1112, 2095, 3277, 3378, 3483, 4031, 4771
AlwNI CAGNNNCTG 1 cut(s) 410
Ama87I CYCGRG 2 cut(s) 1851, 3467
ApaI GGGCCC 2 cut(s) 771, 2512
ApaLI GTGCAC 2 cut(s) 2176, 3160
ApeKI GCWGC 1 cut(s) 1346
ArsI GACNNNNNNTTYG 2 cut(s) 1576, 1608
AseI ATTAAT 2 cut(s) 96, 972
Asp700I GAANNNNTTC 1 cut(s) 676
AspLEI GCGC 4 cut(s) 2494, 2504, 3928, 4659
AsuC2I CCSGG 4 cut(s) 2061, 3468, 3469, 3781
AvaI CYCGRG 2 cut(s) 1851, 3467
AvaII GGWCC 5 cut(s) 152, 3793, 3806, 4058, 4676
AxyI CCTNAGG 2 cut(s) 148, 3751
BaeGI GKGCMC 5 cut(s) 771, 2180, 2512, 3164, 3760
BaeI ACNNNNGTAYC 2 cut(s) 4840, 4873
BalI TGGCCA 3 cut(s) 463, 1409, 1487
BanI GGYRCC 1 cut(s) 531
BanII GRGCYC 6 cut(s) 771, 1619, 2053, 2202, 2512, 4223
BauI CACGAG 3 cut(s) 3564, 3671, 3989
BbsI GAAGAC 2 cut(s) 1584, 2149
Bbv12I GWGCWC 4 cut(s) 1619, 2180, 3164, 4223
BbvI GCAGC 1 cut(s) 1333
BciT130I CCWGG 5 cut(s) 495, 3463, 3486, 3787, 4034
BclI TGATCA 1 cut(s) 4402
BcnI CCSGG 4 cut(s) 2061, 3468, 3469, 3781
BcoDI GTCTC 8 cut(s) 459, 1112, 2115, 2897, 4144, 4351, 4577, 4862
BcuI ACTAGT 2 cut(s) 1231, 2621
BfaI CTAG 9 cut(s) 390, 477, 1232, 1664, 2622, 2843, 3428, 3605, 4239
BfmI CTRYAG 2 cut(s) 1051, 2159
BfoI RGCGCY 1 cut(s) 2505
BfuAI ACCTGC 1 cut(s) 2630
BglI GCCNNNNNGGC 1 cut(s) 4271
BisI GCNGC 4 cut(s) 481, 1347, 2383, 2500
BlsI GCNGC 4 cut(s) 482, 1348, 2384, 2501
BmcAI AGTACT 1 cut(s) 1660
Bme1390I CCNGG 9 cut(s) 495, 2061, 3463, 3468, 3469, 3486, 3781, 3787, 4034
Bme18I GGWCC 5 cut(s) 152, 3793, 3806, 4058, 4676
BmeRI GACNNNNNGTC 1 cut(s) 4674
BmeT110I CYCGRG 2 cut(s) 1851, 3467
BmgBI CACGTC 2 cut(s) 144, 4593
BmrFI CCNGG 9 cut(s) 495, 2061, 3463, 3468, 3469, 3486, 3781, 3787, 4034
BmrI ACTGGG 4 cut(s) 2348, 2914, 3571, 3889
BmsI GCATC 5 cut(s) 382, 938, 1143, 1705, 2858
BmuI ACTGGG 4 cut(s) 2348, 2914, 3571, 3889
BpiI GAAGAC 2 cut(s) 1584, 2149
BplI GAGNNNNNCTC 4 cut(s) 4414, 4446, 4557, 4589
Bpu10I CCTNAGC 1 cut(s) 924
BpuEI CTTGAG 1 cut(s) 1003
BpuMI CCSGG 4 cut(s) 2061, 3468, 3469, 3781
Bsa29I ATCGAT 1 cut(s) 3707
BsaBI GATNNNNATC 1 cut(s) 3042
BsaHI GRCGYC 1 cut(s) 3763
BsaI GGTCTC 1 cut(s) 2115
BsaWI WCCGGW 1 cut(s) 2103
BsaXI ACNNNNNCTCC 4 cut(s) 1422, 1452, 1500, 1530
Bse1I ACTGG 9 cut(s) 2173, 2354, 2920, 3346, 3577, 3651, 3895, 3969, 4061
Bse21I CCTNAGG 2 cut(s) 148, 3751
Bse3DI GCAATG 2 cut(s) 1110, 4652
Bse8I GATNNNNATC 1 cut(s) 3042
BseBI CCWGG 5 cut(s) 495, 3463, 3486, 3787, 4034
BseCI ATCGAT 1 cut(s) 3707
BseJI GATNNNNATC 1 cut(s) 3042
BseMI GCAATG 2 cut(s) 1110, 4652
BseMII CTCAG 4 cut(s) 1976, 2215, 4077, 4346
BseNI ACTGG 9 cut(s) 2173, 2354, 2920, 3346, 3577, 3651, 3895, 3969, 4061
BseRI GAGGAG 3 cut(s) 664, 3705, 4565
BseSI GKGCMC 5 cut(s) 771, 2180, 2512, 3164, 3760
BseXI GCAGC 1 cut(s) 1333
Bsh1236I CGCG 3 cut(s) 3926, 4517, 4659
BshNI GGYRCC 1 cut(s) 531
BshVI ATCGAT 1 cut(s) 3707
BsiHKAI GWGCWC 4 cut(s) 1619, 2180, 3164, 4223
BsiHKCI CYCGRG 2 cut(s) 1851, 3467
BsiSI CCGG 4 cut(s) 2061, 2104, 3468, 3781
BslFI GGGAC 8 cut(s) 516, 1203, 1270, 1618, 1741, 3484, 3806, 4486
BsmAI GTCTC 8 cut(s) 459, 1112, 2115, 2897, 4144, 4351, 4577, 4862
BsmBI CGTCTC 2 cut(s) 1112, 4351
BsmFI GGGAC 8 cut(s) 516, 1203, 1270, 1618, 1741, 3484, 3806, 4486
BsmI GAATGC 4 cut(s) 2828, 3031, 3061, 4748
Bso31I GGTCTC 1 cut(s) 2115
BsoBI CYCGRG 2 cut(s) 1851, 3467
Bsp120I GGGCCC 2 cut(s) 767, 2508
Bsp1286I GDGCHC 9 cut(s) 771, 1619, 2053, 2180, 2202, 2512, 3164, 3760, 4223
Bsp1407I TGTACA 2 cut(s) 247, 982
Bsp19I CCATGG 1 cut(s) 464
BspCNI CTCAG 4 cut(s) 1977, 2214, 4078, 4347
BspDI ATCGAT 1 cut(s) 3707
BspFNI CGCG 3 cut(s) 3926, 4517, 4659
BspHI TCATGA 4 cut(s) 1128, 3021, 4120, 4897
BspMI ACCTGC 1 cut(s) 2630
BspPI GGATC 7 cut(s) 1112, 2095, 3277, 3378, 3483, 4031, 4771
BspQI GCTCTTC 1 cut(s) 4228
BspT107I GGYRCC 1 cut(s) 531
BspTNI GGTCTC 1 cut(s) 2115
BsrBI CCGCTC 3 cut(s) 3357, 3493, 3811
BsrDI GCAATG 2 cut(s) 1110, 4652
BsrGI TGTACA 2 cut(s) 247, 982
BsrI ACTGG 9 cut(s) 2173, 2354, 2920, 3346, 3577, 3651, 3895, 3969, 4061
BssNI GRCGYC 1 cut(s) 3763
BssSI CACGAG 3 cut(s) 3564, 3671, 3989
BssT1I CCWWGG 9 cut(s) 464, 1426, 1504, 2037, 2117, 2549, 2863, 4169, 4698
Bst2BI CACGAG 3 cut(s) 3564, 3671, 3989
Bst2UI CCWGG 5 cut(s) 495, 3463, 3486, 3787, 4034
Bst6I CTCTTC 2 cut(s) 2118, 4228
BstACI GRCGYC 1 cut(s) 3763
BstAPI GCANNNNNTGC 1 cut(s) 2218
BstAUI TGTACA 2 cut(s) 247, 982
BstC8I GCNNGC 3 cut(s) 2049, 3491, 4145
BstDSI CCRYGG 1 cut(s) 464
BstEII GGTNACC 2 cut(s) 3583, 3901
BstENI CCTNNNNNAGG 1 cut(s) 4697
BstFNI CGCG 3 cut(s) 3926, 4517, 4659
BstH2I RGCGCY 1 cut(s) 2505
BstHHI GCGC 4 cut(s) 2494, 2504, 3928, 4659
BstMAI GTCTC 8 cut(s) 459, 1112, 2115, 2897, 4144, 4351, 4577, 4862
BstMWI GCNNNNNNNGC 6 cut(s) 587, 1702, 2218, 2388, 3934, 4271
BstNI CCWGG 5 cut(s) 495, 3463, 3486, 3787, 4034
BstNSI RCATGY 3 cut(s) 3014, 3018, 4754
BstPI GGTNACC 2 cut(s) 3583, 3901
BstSCI CCNGG 9 cut(s) 493, 2059, 3461, 3466, 3467, 3484, 3779, 3785, 4032
BstSFI CTRYAG 2 cut(s) 1051, 2159
BstSLI GKGCMC 5 cut(s) 771, 2180, 2512, 3164, 3760
BstUI CGCG 3 cut(s) 3926, 4517, 4659
BstV1I GCAGC 1 cut(s) 1333
BstV2I GAAGAC 2 cut(s) 1584, 2149
BstXI CCANNNNNNTGG 1 cut(s) 528
Bsu15I ATCGAT 1 cut(s) 3707
Bsu36I CCTNAGG 2 cut(s) 148, 3751
BsuTUI ATCGAT 1 cut(s) 3707
BtgI CCRYGG 1 cut(s) 464
BtgZI GCGATG 1 cut(s) 4053
BtrI CACGTC 2 cut(s) 144, 4593
BtsI GCAGTG 1 cut(s) 2775
BtsIMutI CAGTG 9 cut(s) 2180, 2457, 2775, 3162, 3584, 3658, 3902, 3976, 4352
BveI ACCTGC 1 cut(s) 2630
Cac8I GCNNGC 3 cut(s) 2049, 3491, 4145
CaiI CAGNNNCTG 1 cut(s) 410
CciI TCATGA 4 cut(s) 1128, 3021, 4120, 4897
CfoI GCGC 4 cut(s) 2494, 2504, 3928, 4659
Cfr9I CCCGGG 1 cut(s) 3467
ClaI ATCGAT 1 cut(s) 3707
CseI GACGC 6 cut(s) 379, 513, 549, 2400, 4091, 4540
CspCI CAANNNNNGTGG 2 cut(s) 222, 257
DraI TTTAAA 5 cut(s) 711, 820, 828, 862, 1803
DraIII CACNNNGTG 1 cut(s) 53
DriI GACNNNNNGTC 1 cut(s) 4674
EaeI YGGCCR 3 cut(s) 461, 1407, 1485
Eam1104I CTCTTC 2 cut(s) 2118, 4228
Eam1105I GACNNNNNGTC 1 cut(s) 4674
EarI CTCTTC 2 cut(s) 2118, 4228
Ecl136II GAGCTC 2 cut(s) 1617, 4221
Eco130I CCWWGG 9 cut(s) 464, 1426, 1504, 2037, 2117, 2549, 2863, 4169, 4698
Eco147I AGGCCT 4 cut(s) 1425, 1503, 3669, 3987
Eco24I GRGCYC 6 cut(s) 771, 1619, 2053, 2202, 2512, 4223
Eco31I GGTCTC 1 cut(s) 2115
Eco47I GGWCC 5 cut(s) 152, 3793, 3806, 4058, 4676
Eco53kI GAGCTC 2 cut(s) 1617, 4221
Eco57I CTGAAG 4 cut(s) 26, 652, 3170, 4828
Eco81I CCTNAGG 2 cut(s) 148, 3751
Eco88I CYCGRG 2 cut(s) 1851, 3467
Eco91I GGTNACC 2 cut(s) 3583, 3901
EcoICRI GAGCTC 2 cut(s) 1617, 4221
EcoNI CCTNNNNNAGG 1 cut(s) 4697
EcoO109I RGGNCCY 4 cut(s) 152, 767, 768, 2509
EcoO65I GGTNACC 2 cut(s) 3583, 3901
EcoRI GAATTC 2 cut(s) 209, 672
EcoRII CCWGG 5 cut(s) 493, 3461, 3484, 3785, 4032
EcoT14I CCWWGG 9 cut(s) 464, 1426, 1504, 2037, 2117, 2549, 2863, 4169, 4698
EcoT22I ATGCAT 1 cut(s) 3016
EcoT38I GRGCYC 6 cut(s) 771, 1619, 2053, 2202, 2512, 4223
ErhI CCWWGG 9 cut(s) 464, 1426, 1504, 2037, 2117, 2549, 2863, 4169, 4698
Esp3I CGTCTC 2 cut(s) 1112, 4351
FalI AAGNNNNNCTT 4 cut(s) 1778, 1810, 4012, 4044
FaqI GGGAC 8 cut(s) 516, 1203, 1270, 1618, 1741, 3484, 3806, 4486
FauI CCCGC 4 cut(s) 757, 2226, 3498, 4652
FauNDI CATATG 2 cut(s) 2877, 4853
FbaI TGATCA 1 cut(s) 4402
FblI GTMKAC 1 cut(s) 2158
Fnu4HI GCNGC 4 cut(s) 481, 1347, 2383, 2500
FriOI GRGCYC 6 cut(s) 771, 1619, 2053, 2202, 2512, 4223
Fsp4HI GCNGC 4 cut(s) 481, 1347, 2383, 2500
FspBI CTAG 9 cut(s) 390, 477, 1232, 1664, 2622, 2843, 3428, 3605, 4239
GlaI GCGC 4 cut(s) 2493, 2503, 3927, 4658
GluI GCNGC 4 cut(s) 481, 1347, 2383, 2500
HaeII RGCGCY 1 cut(s) 2505
HapII CCGG 4 cut(s) 2061, 2104, 3468, 3781
HgaI GACGC 6 cut(s) 379, 513, 549, 2400, 4091, 4540
HhaI GCGC 4 cut(s) 2494, 2504, 3928, 4659
Hin1I GRCGYC 1 cut(s) 3763
Hin6I GCGC 4 cut(s) 2492, 2502, 3926, 4657
HinP1I GCGC 4 cut(s) 2492, 2502, 3926, 4657
HincII GTYRAC 7 cut(s) 358, 424, 1158, 1607, 2529, 3405, 3622
HindII GTYRAC 7 cut(s) 358, 424, 1158, 1607, 2529, 3405, 3622
HinfI GANTC 9 cut(s) 66, 407, 551, 654, 2225, 3209, 4619, 4894, 4912
HpaI GTTAAC 3 cut(s) 424, 1158, 3622
HpaII CCGG 4 cut(s) 2061, 2104, 3468, 3781
Hpy99I CGWCG 4 cut(s) 373, 543, 1982, 3765
HpyAV CCTTC 9 cut(s) 492, 545, 2080, 2936, 2987, 3155, 3223, 3622, 4344
HpyCH4IV ACGT 4 cut(s) 143, 2133, 3763, 4592
HpyCH4V TGCA 7 cut(s) 573, 2178, 2391, 3014, 3162, 3240, 4143
HpyF10VI GCNNNNNNNGC 6 cut(s) 587, 1702, 2218, 2388, 3934, 4271
HpySE526I ACGT 4 cut(s) 143, 2133, 3763, 4592
Hsp92I GRCGYC 1 cut(s) 3763
HspAI GCGC 4 cut(s) 2492, 2502, 3926, 4657
Ksp22I TGATCA 1 cut(s) 4402
KspAI GTTAAC 3 cut(s) 424, 1158, 3622
LguI GCTCTTC 1 cut(s) 4228
LmnI GCTCC 4 cut(s) 1693, 2631, 3034, 3816
Lsp1109I GCAGC 1 cut(s) 1333
LweI GCATC 5 cut(s) 382, 938, 1143, 1705, 2858
MaeI CTAG 9 cut(s) 390, 477, 1232, 1664, 2622, 2843, 3428, 3605, 4239
MaeII ACGT 4 cut(s) 143, 2133, 3763, 4592
MbiI CCGCTC 3 cut(s) 3357, 3493, 3811
MhlI GDGCHC 9 cut(s) 771, 1619, 2053, 2180, 2202, 2512, 3164, 3760, 4223
MlsI TGGCCA 3 cut(s) 463, 1409, 1487
MluNI TGGCCA 3 cut(s) 463, 1409, 1487
MlyI GAGTC 2 cut(s) 663, 4628
MmeI TCCRAC 8 cut(s) 988, 1082, 2001, 2696, 2904, 3242, 4259, 4266
Mox20I TGGCCA 3 cut(s) 463, 1409, 1487
Mph1103I ATGCAT 1 cut(s) 3016
MroXI GAANNNNTTC 1 cut(s) 676
MscI TGGCCA 3 cut(s) 463, 1409, 1487
MslI CAYNNNNRTG 5 cut(s) 98, 255, 1173, 2299, 2660
Msp20I TGGCCA 3 cut(s) 463, 1409, 1487
MspI CCGG 4 cut(s) 2061, 2104, 3468, 3781
MspR9I CCNGG 9 cut(s) 495, 2061, 3463, 3468, 3469, 3486, 3781, 3787, 4034
Mva1269I GAATGC 4 cut(s) 2828, 3031, 3061, 4748
MvaI CCWGG 5 cut(s) 495, 3463, 3486, 3787, 4034
MvnI CGCG 3 cut(s) 3926, 4517, 4659
MwoI GCNNNNNNNGC 6 cut(s) 587, 1702, 2218, 2388, 3934, 4271
NciI CCSGG 4 cut(s) 2061, 3468, 3469, 3781
NcoI CCATGG 1 cut(s) 464
NdeI CATATG 2 cut(s) 2877, 4853
NmeAIII GCCGAG 1 cut(s) 4173
NmuCI GTSAC 7 cut(s) 783, 2452, 2624, 3454, 3583, 3772, 3901
NsiI ATGCAT 1 cut(s) 3016
NspI RCATGY 3 cut(s) 3014, 3018, 4754
OliI CACNNNNGTG 1 cut(s) 2299
PagI TCATGA 4 cut(s) 1128, 3021, 4120, 4897
PaqCI CACCTGC 1 cut(s) 2630
PasI CCCWGGG 1 cut(s) 4033
PceI AGGCCT 4 cut(s) 1425, 1503, 3669, 3987
PciI ACATGT 1 cut(s) 4750
PciSI GCTCTTC 1 cut(s) 4228
PctI GAATGC 4 cut(s) 2828, 3031, 3061, 4748
PdmI GAANNNNTTC 1 cut(s) 676
PfeI GAWTC 7 cut(s) 66, 407, 551, 2225, 3209, 4894, 4912
PflMI CCANNNNNTGG 1 cut(s) 3802
PfoI TCCNGGA 1 cut(s) 493
PkrI GCNGC 4 cut(s) 482, 1348, 2384, 2501
PleI GAGTC 2 cut(s) 662, 4627
PpsI GAGTC 2 cut(s) 662, 4627
PpuMI RGGWCCY 1 cut(s) 152
PscI ACATGT 1 cut(s) 4750
PshBI ATTAAT 2 cut(s) 96, 972
PsiI TTATAA 3 cut(s) 1272, 1319, 4053
Psp124BI GAGCTC 2 cut(s) 1619, 4223
Psp5II RGGWCCY 1 cut(s) 152
Psp6I CCWGG 5 cut(s) 493, 3461, 3484, 3785, 4032
PspEI GGTNACC 2 cut(s) 3583, 3901
PspGI CCWGG 5 cut(s) 493, 3461, 3484, 3785, 4032
PspOMI GGGCCC 2 cut(s) 767, 2508
PspPPI RGGWCCY 1 cut(s) 152
PstNI CAGNNNCTG 1 cut(s) 410
RseI CAYNNNNRTG 5 cut(s) 98, 255, 1173, 2299, 2660
SacI GAGCTC 2 cut(s) 1619, 4223
SapI GCTCTTC 1 cut(s) 4228
SatI GCNGC 4 cut(s) 481, 1347, 2383, 2500
ScaI AGTACT 1 cut(s) 1660
SchI GAGTC 2 cut(s) 663, 4628
ScrFI CCNGG 9 cut(s) 495, 2061, 3463, 3468, 3469, 3486, 3781, 3787, 4034
SduI GDGCHC 9 cut(s) 771, 1619, 2053, 2180, 2202, 2512, 3164, 3760, 4223
SfaNI GCATC 5 cut(s) 382, 938, 1143, 1705, 2858
SfcI CTRYAG 2 cut(s) 1051, 2159
SinI GGWCC 5 cut(s) 152, 3793, 3806, 4058, 4676
SmaI CCCGGG 1 cut(s) 3469
SmiMI CAYNNNNRTG 5 cut(s) 98, 255, 1173, 2299, 2660
SmlI CTYRAG 1 cut(s) 1018
SmoI CTYRAG 1 cut(s) 1018
SpeI ACTAGT 2 cut(s) 1231, 2621
SseBI AGGCCT 4 cut(s) 1425, 1503, 3669, 3987
SspI AATATT 8 cut(s) 277, 742, 756, 936, 1192, 2442, 2651, 2817
SspMI CTAG 9 cut(s) 390, 477, 1232, 1664, 2622, 2843, 3428, 3605, 4239
SstI GAGCTC 2 cut(s) 1619, 4223
StuI AGGCCT 4 cut(s) 1425, 1503, 3669, 3987
StyD4I CCNGG 9 cut(s) 493, 2059, 3461, 3466, 3467, 3484, 3779, 3785, 4032
StyI CCWWGG 9 cut(s) 464, 1426, 1504, 2037, 2117, 2549, 2863, 4169, 4698
TaiI ACGT 4 cut(s) 146, 2136, 3766, 4595
TauI GCSGC 3 cut(s) 483, 2385, 2502
TfiI GAWTC 7 cut(s) 66, 407, 551, 2225, 3209, 4894, 4912
TscAI CASTG 9 cut(s) 2180, 2457, 2782, 3169, 3584, 3658, 3902, 3976, 4359
TseFI GTSAC 7 cut(s) 783, 2452, 2624, 3454, 3583, 3772, 3901
TseI GCWGC 1 cut(s) 1346
Tsp45I GTSAC 7 cut(s) 783, 2452, 2624, 3454, 3583, 3772, 3901
TspGWI ACGGA 8 cut(s) 1136, 1706, 2435, 3131, 3383, 3488, 3653, 3971
TspMI CCCGGG 1 cut(s) 3467
TspRI CASTG 9 cut(s) 2180, 2457, 2782, 3169, 3584, 3658, 3902, 3976, 4359
Van91I CCANNNNNTGG 1 cut(s) 3802
VneI GTGCAC 2 cut(s) 2176, 3160
VpaK11BI GGWCC 5 cut(s) 152, 3793, 3806, 4058, 4676
VspI ATTAAT 2 cut(s) 96, 972
XagI CCTNNNNNAGG 1 cut(s) 4697
XceI RCATGY 3 cut(s) 3014, 3018, 4754
XcmI CCANNNNNNNNNTGG 3 cut(s) 1389, 1467, 3107
XmaI CCCGGG 1 cut(s) 3467
XmiI GTMKAC 1 cut(s) 2158
XmnI GAANNNNTTC 1 cut(s) 676
XspI CTAG 9 cut(s) 390, 477, 1232, 1664, 2622, 2843, 3428, 3605, 4239
ZraI GACGTC 1 cut(s) 3764
ZrmI AGTACT 1 cut(s) 1660
Zsp2I ATGCAT 1 cut(s) 3016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.