pycom13g27130

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
23522122 .. 23527257
5136 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g27130.12

Sequence Viewer

Length: 3555 bp
ATGCATTGTATGGTCATGATACAATTTGAAATTACCATTTGCCCGACGATAGTTTGCCTAATTGATCAGAAAAAATGGTCAATGTTTTTTTTTTTTTTCAAAGACTTTAGGCAACAAAAAATTTCAACGAGCAAAGTTTCGTGCCAAGGGAAAAAGTTGGCGCATATTATGCCACCTTTTGAACGACAGAAAACAAGTTCATCTGCAAATGTAATAATGCCTAACGAAATATTGGTCGGGCTAAGTGTATGGTTGTCGGGCAAAAACCCACGATGGCTTGTCCTAACCGTACCAACACCTTTTTGTTCTACAACTTTGGTGACTTTGTTGTGCGGCCTTCTCCTTCTCGTTTCTTCTTTCCTAGTTCTCATCTATGCTCCATATATCTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCCACCTATCACCCACCTCATCACCCATATCTCACTCTCTCACTCTCCCAATTAATTTAAGATTTTTTTATGAATTAGAATACATATATATATATATATATATATATATATATATATATTGTTTAGATTTGATTCTAGTTATCCTTTCCTATTGTAACTTATATTCCTTGGGGAAGAAGGAATATCTTCTCTCCTTCTATTACTATATGATAGGATTAGTTTCCATTTATTATAGTGTTTTAAGCCATTTTTGTGTGTTTGTAGGTCCTAATGGCAAAAGAGGCAAGAAAGTGCATTTTGGAGCTATTTGGAGTAGTTTTGGGCTTGGAATGGATAGCTTGCATATGGAGCAAGGTGGATGGACGAATTTGAAGTCAAAAGAGGCTAGGAACATGCTACAAATTTGGAGAAACAAGTTTAAGACAAAGAAGATAAGGAAAGATCTAGCTGCAAAGAGGACTCCTTTTCACATTAAATCACCTAAATATCTGCTTATTCCTTGTCCTTCTAGAAACCTATCACAATACCCTATTTTAGAAGCCCTAAGGATTTGCCGCACCCTCTCCTTATTCTCCTTGGTTTCTACCATCCCTACATATACACATATATACCGCACCACATGGGGGAGGGTTTTAGAGAGAAATCAGAAAATTCAAAGGTGTGCCACATCAAGGAGAAGGAAGGAAGGGAGAAGCCTTTGTGTCGTGCCTATGCCCAAGCTTTTGGGAGTGTTGGAGCGTCTCTGGGGTGTCTTCTATCCTTGTTTTAGTTTTACAATTACGTTGATTTCGTTGTTAATTTATGTTTTATATGAATTGATTACGTCCAATTATTATTTCTTGAGACTTGAATGTAATTTCGTTATGAACTTATATTCACAAGTAGTGGAAGTCACTAGTCATGATTGTATTAAGCCTCGTCAATGCTTATGGTTTTCAAAGAACTTAATGACCTTTGATATGTCTTTCTATCATGCTTTTCATATGAAGGAAAATCTGAAAGTTAATTTGCGCTTTTCACGGTTAATTTGGGTGGTTTGTATGCATATGTCATGTGTGGAGAAGGACCGTCTAACTAGCCTTTCACCCTTTTTAATTCACCAAATTCGTTTTTATAAATTGTTTTATCCCCCTTCCATTGAGTCTTATCAGTTGAGTCAAAATCTGTTTTCTTTTAGTCTTTTGAGTCAAGTTAAGTCTTATTTTCGTCAAAATCACTTGTTAGGTTTAGAATTGAGTCTTTTGATTGTTTGTTGCTGTTTTGAGTGCTTTGAGTCAGTTTTGATAGCATCCCTAGTTAATCCCCGGTCTAGAACGATCCCTACTTACATATATACTATAATTGTCAACAATAGGGCACAATGTAGGAGGAATAACAACACACACACACACACATTCCCCTACAATTCTACATACACATCTCTCTCTCTTTTCCTTTCCTATCAGCATGCTCCTACCACTACGCTTAGGAATCTGACATTGAAGAATTTTTCTGCATCAAACCAGTTCATCCATATCATCACACAATCAGGTTCTTTCAAAACAACGGACCCAACTTTAAGTTTTACGTATTTTAGATTCTACATAGATTGTGTATGCCTCAAAATCATAATTATTTGTATATTAAATTATATATCAAAAATTGAAAAGAAAAAAAAATTTGGGAACCTAGGCCAAGCCGAGATCCTGCATCTCTTTTTCTCCCCAGAAAACCCATGGAGCCAGAAGCTCCCAGTCTCAAAACCAACAAAACCCGACACCTTTCATGGTGTCCTCGACCACGGCATGGCCTGCAGCCATTGCCTTGAACCTTTGGTTCATGTCGCCGACGACCAGAAGTCGCCCACGTCAAAAATTGGACTGAGATTCGCCCGAATCTCGTCAAAATTTTTTGGAAATTCCGATTCAATTTTTCTAGGTCGAAAACACCCTAGAAGGGTACCCCCGAGTCTTCCCGTCCAAGATTTGGCCACTTGCAGTGGCGGCGTCGATCGACCTTCTCCAGCAGAATCACCTAGCCTCGCTAGGATTTCTTGGATCAAGCCTGACCCCAAAATTTTTTTTTGGGCCTGGCCTCAACTCATGCTGAAAAAAAAAAAAAAAGTGTTTTTTTCTTTTGGGCTCCACTGCATCACACCAGCCAAAATAGGCTCTGGTGTTCTCCCGTGCCTTCCCTGCATCGTGATATGCACGATTGAGGCCTCCTTTGGGCTTCTGCCACCTGGGCCTGAGTCTGCAGCCCAACCCTATACATACGAGACTTATTTCCAGCCCAGATTGGGCCTGGACCCCTCGGCACCCATTTTATTTAGCCACCCCGTGGGCTTATGTATTCCTTTTAGGCCCTTAATTTTTTTCACCCATGTTTTAATTTGGCCCAAAGTCCAAATAAATCAATTCAATTATAATTACAAACCTAAAAATTCTATTTTTGCATTAAAAATCACTCCCCACATAGATTTTATAACATGCCTTAGAGAATTCACTCAATTCCTCACTGGATATACTCTCTATTTTCACACAAATTTTCTGACTACACTCCTTATACTAAGTATATGTGAGAAGATTGATGTAAACATCCTCAACTCACGAACGGAATGCCACTACTTAGACGCGAGAACCAGGGATCCCATATGCTTGTACCAATTTCAAACTCCACATATTGAAACGCATAACAATCAAGATAGAAGTCTAAGGGTTGTAACGGGGCTAAGGTATTGGCTAACAAAGGAAGGTAAGGATAAACAAAAAATTCAACCTTTGATTATTCAAACTTTTGGACCCTTTCTTCAACAACCAATACTTGTGAGTTCACTCTCACTTATTTCTCAACTCTTTTTCCTTTCTTTTTTTTTCACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTGAAACACAAAAACGTACTCCATCACCAATTCACAAAGACAAATTCTTCCCCCACACTTGTTTTTCTGCATATTGTAGATCAAAAGGAATTCCCAACAAGCTAGGTAAGGATAATGTGGCTAACAAAGAAAATAGGCTAACTAAGGCTCAACGGGCTTGTTATTTGTTATGCAATCAATTTTATGCTTTGAATGAAACGGGCATGAGTTCTAGTATTTGGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1185

Amino Acids

137.09

Weight (kDa)

9.5

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1554, 2844, 2903
Acc65I GGTACC 1 cut(s) 2377
AccB1I GGYRCC 2 cut(s) 2377, 2734
AccB7I CCANNNNNTGG 3 cut(s) 2224, 2404, 2758
AccII CGCG 1 cut(s) 3053
AciI CCGC 4 cut(s) 333, 994, 1051, 2421
AclWI GGATC 5 cut(s) 1750, 2116, 2483, 3059, 3072
AcoI YGGCCR 1 cut(s) 2406
AcyI GRCGYC 1 cut(s) 2424
AdeI CACNNNGTG 1 cut(s) 2758
AfaI GTAC 4 cut(s) 291, 2379, 3080, 3346
AfiI CCNNNNNNNGG 8 cut(s) 1062, 1110, 2224, 2374, 2404, 2646, 2717, 2758
AhdI GACNNNNNGTC 1 cut(s) 2275
AhlI ACTAGT 1 cut(s) 1334
AjiI CACGTC 1 cut(s) 2286
AjnI CCWGG 4 cut(s) 2507, 2659, 2721, 3059
AjuI GAANNNNNNNTTGG 2 cut(s) 1259, 1291
AloI GAACNNNNNNTCC 2 cut(s) 3049, 3081
AluBI AGCT 6 cut(s) 743, 777, 887, 1159, 2167, 3430
AluI AGCT 6 cut(s) 743, 777, 887, 1159, 2167, 3430
Alw26I GTCTC 4 cut(s) 1184, 1276, 2179, 2690
AlwI GGATC 5 cut(s) 1750, 2116, 2483, 3059, 3072
Ama87I CYCGRG 1 cut(s) 2383
ApeKI GCWGC 3 cut(s) 887, 2232, 2675
ArsI GACNNNNNNTTYG 4 cut(s) 219, 251, 797, 829
AseI ATTAAT 1 cut(s) 492
Asp700I GAANNNNTTC 1 cut(s) 624
Asp718I GGTACC 1 cut(s) 2377
AspA2I CCTAGG 1 cut(s) 2107
AspLEI GCGC 2 cut(s) 163, 1452
AsuC2I CCSGG 1 cut(s) 1744
AvaI CYCGRG 1 cut(s) 2383
AvaII GGWCC 5 cut(s) 704, 1504, 1987, 2725, 3218
AvrII CCTAGG 1 cut(s) 2107
AxyI CCTNAGG 1 cut(s) 983
BaeGI GKGCMC 1 cut(s) 1798
BalI TGGCCA 1 cut(s) 2408
BamHI GGATCC 1 cut(s) 3064
BanI GGYRCC 2 cut(s) 2377, 2734
BanII GRGCYC 1 cut(s) 2562
BbsI GAAGAC 2 cut(s) 1183, 2381
BbvI GCAGC 3 cut(s) 874, 2244, 2687
BccI CCATC 4 cut(s) 267, 792, 1034, 3358
BceAI ACGGC 1 cut(s) 2236
BcgI CGANNNNNNTGC 2 cut(s) 3018, 3052
BciT130I CCWGG 4 cut(s) 2509, 2661, 2723, 3061
BclI TGATCA 1 cut(s) 64
BcnI CCSGG 1 cut(s) 1744
BcoDI GTCTC 4 cut(s) 1184, 1276, 2179, 2690
BcuI ACTAGT 1 cut(s) 1334
BfmI CTRYAG 2 cut(s) 2230, 2673
BglI GCCNNNNNGGC 1 cut(s) 2662
BglII AGATCT 1 cut(s) 880
BisI GCNGC 6 cut(s) 334, 888, 994, 2233, 2422, 2676
BlnI CCTAGG 1 cut(s) 2107
BlsI GCNGC 6 cut(s) 335, 889, 995, 2234, 2423, 2677
Bme1390I CCNGG 5 cut(s) 1744, 2509, 2661, 2723, 3061
Bme18I GGWCC 5 cut(s) 704, 1504, 1987, 2725, 3218
BmeRI GACNNNNNGTC 1 cut(s) 2275
BmeT110I CYCGRG 1 cut(s) 2383
BmgBI CACGTC 1 cut(s) 2286
BmiI GGNNCC 9 cut(s) 1989, 2105, 2159, 2379, 2561, 2727, 2736, 3066, 3220
BmrFI CCNGG 5 cut(s) 1744, 2509, 2661, 2723, 3061
BmrI ACTGGG 1 cut(s) 2165
BmsI GCATC 5 cut(s) 1736, 1943, 2137, 2577, 2625
BmuI ACTGGG 1 cut(s) 2165
BpiI GAAGAC 2 cut(s) 1183, 2381
BpmI CTGGAG 1 cut(s) 2424
Bpu10I CCTNAGC 2 cut(s) 1904, 3149
BpuEI CTTGAG 1 cut(s) 1300
BpuMI CCSGG 1 cut(s) 1744
BsaAI YACGTR 1 cut(s) 2007
BsaHI GRCGYC 1 cut(s) 2424
Bsc4I CCNNNNNNNGG 8 cut(s) 1062, 1110, 2224, 2374, 2404, 2646, 2717, 2758
Bse1I ACTGG 3 cut(s) 1942, 2171, 2941
Bse21I CCTNAGG 1 cut(s) 983
Bse3DI GCAATG 1 cut(s) 2236
BseBI CCWGG 4 cut(s) 2509, 2661, 2723, 3061
BseGI GGATG 5 cut(s) 803, 1026, 1727, 1947, 3015
BseLI CCNNNNNNNGG 8 cut(s) 1062, 1110, 2224, 2374, 2404, 2646, 2717, 2758
BseMI GCAATG 1 cut(s) 2236
BseMII CTCAG 2 cut(s) 2291, 2658
BseNI ACTGG 3 cut(s) 1942, 2171, 2941
BseSI GKGCMC 1 cut(s) 1798
BseXI GCAGC 3 cut(s) 874, 2244, 2687
Bsh1236I CGCG 1 cut(s) 3053
Bsh1285I CGRYCG 1 cut(s) 2431
BshNI GGYRCC 2 cut(s) 2377, 2734
BsiEI CGRYCG 1 cut(s) 2431
BsiHKCI CYCGRG 1 cut(s) 2383
BsiSI CCGG 1 cut(s) 1744
BslI CCNNNNNNNGG 8 cut(s) 1062, 1110, 2224, 2374, 2404, 2646, 2717, 2758
BsmAI GTCTC 4 cut(s) 1184, 1276, 2179, 2690
BsmBI CGTCTC 1 cut(s) 1184
BsmI GAATGC 1 cut(s) 3041
BsoBI CYCGRG 1 cut(s) 2383
Bsp1286I GDGCHC 2 cut(s) 1798, 2562
Bsp143I GATC 8 cut(s) 64, 880, 1755, 2121, 2428, 2475, 3064, 3407
Bsp19I CCATGG 1 cut(s) 2153
BspACI CCGC 4 cut(s) 333, 994, 1051, 2421
BspCNI CTCAG 2 cut(s) 2292, 2659
BspFNI CGCG 1 cut(s) 3053
BspHI TCATGA 2 cut(s) 15, 1339
BspLI GGNNCC 9 cut(s) 1989, 2105, 2159, 2379, 2561, 2727, 2736, 3066, 3220
BspMAI CTGCAG 2 cut(s) 2234, 2677
BspPI GGATC 5 cut(s) 1750, 2116, 2483, 3059, 3072
BspT107I GGYRCC 2 cut(s) 2377, 2734
BsrDI GCAATG 1 cut(s) 2236
BsrI ACTGG 3 cut(s) 1942, 2171, 2941
BssMI GATC 8 cut(s) 64, 880, 1755, 2121, 2428, 2475, 3064, 3407
BssNI GRCGYC 1 cut(s) 2424
BssT1I CCWWGG 5 cut(s) 145, 606, 1014, 2107, 2153
Bst2UI CCWGG 4 cut(s) 2509, 2661, 2723, 3061
Bst4CI ACNGT 3 cut(s) 289, 1461, 1508
BstACI GRCGYC 1 cut(s) 2424
BstAPI GCANNNNNTGC 3 cut(s) 169, 2229, 2238
BstBAI YACGTR 1 cut(s) 2007
BstC8I GCNNGC 3 cut(s) 779, 1887, 2230
BstDSI CCRYGG 3 cut(s) 2153, 2218, 2757
BstF5I GGATG 5 cut(s) 803, 1026, 1727, 1947, 3015
BstFNI CGCG 1 cut(s) 3053
BstHHI GCGC 2 cut(s) 163, 1452
BstKTI GATC 8 cut(s) 67, 883, 1758, 2124, 2431, 2478, 3067, 3410
BstMAI GTCTC 4 cut(s) 1184, 1276, 2179, 2690
BstMBI GATC 8 cut(s) 64, 880, 1755, 2121, 2428, 2475, 3064, 3407
BstMCI CGRYCG 1 cut(s) 2431
BstMWI GCNNNNNNNGC 9 cut(s) 169, 720, 787, 2229, 2238, 2421, 2613, 2662, 3482
BstNI CCWGG 4 cut(s) 2509, 2661, 2723, 3061
BstNSI RCATGY 3 cut(s) 835, 1889, 2910
BstSCI CCNGG 5 cut(s) 1742, 2507, 2659, 2721, 3059
BstSFI CTRYAG 2 cut(s) 2230, 2673
BstSLI GKGCMC 1 cut(s) 1798
BstSNI TACGTA 1 cut(s) 2007
BstUI CGCG 1 cut(s) 3053
BstV1I GCAGC 3 cut(s) 874, 2244, 2687
BstV2I GAAGAC 2 cut(s) 1183, 2381
BstX2I RGATCY 3 cut(s) 880, 2121, 3064
BstXI CCANNNNNNTGG 1 cut(s) 1162
BstYI RGATCY 3 cut(s) 880, 2121, 3064
Bsu36I CCTNAGG 1 cut(s) 983
BtgI CCRYGG 3 cut(s) 2153, 2218, 2757
BtrI CACGTC 1 cut(s) 2286
BtsCI GGATG 5 cut(s) 803, 1026, 1727, 1947, 3015
BtsI GCAGTG 2 cut(s) 2422, 2563
BtsIMutI CAGTG 3 cut(s) 2422, 2563, 2934
Cac8I GCNNGC 3 cut(s) 779, 1887, 2230
CciI TCATGA 2 cut(s) 15, 1339
CfoI GCGC 2 cut(s) 163, 1452
CseI GACGC 3 cut(s) 1166, 2413, 3059
Csp6I GTAC 4 cut(s) 290, 2378, 3079, 3345
CviQI GTAC 4 cut(s) 290, 2378, 3079, 3345
DpnI GATC 8 cut(s) 66, 882, 1757, 2123, 2430, 2477, 3066, 3409
DpnII GATC 8 cut(s) 64, 880, 1755, 2121, 2428, 2475, 3064, 3407
DraIII CACNNNGTG 1 cut(s) 2758
DriI GACNNNNNGTC 1 cut(s) 2275
EaeI YGGCCR 1 cut(s) 2406
Eam1105I GACNNNNNGTC 1 cut(s) 2275
Eco105I TACGTA 1 cut(s) 2007
Eco130I CCWWGG 5 cut(s) 145, 606, 1014, 2107, 2153
Eco147I AGGCCT 1 cut(s) 2639
Eco24I GRGCYC 1 cut(s) 2562
Eco47I GGWCC 5 cut(s) 704, 1504, 1987, 2725, 3218
Eco81I CCTNAGG 1 cut(s) 983
Eco88I CYCGRG 1 cut(s) 2383
EcoO109I RGGNCCY 2 cut(s) 704, 2781
EcoRI GAATTC 2 cut(s) 2918, 3417
EcoRII CCWGG 4 cut(s) 2507, 2659, 2721, 3059
EcoT14I CCWWGG 5 cut(s) 145, 606, 1014, 2107, 2153
EcoT22I ATGCAT 2 cut(s) 6, 1485
EcoT38I GRGCYC 1 cut(s) 2562
ErhI CCWWGG 5 cut(s) 145, 606, 1014, 2107, 2153
Esp3I CGTCTC 1 cut(s) 1184
FauNDI CATATG 4 cut(s) 783, 1422, 1485, 3071
FbaI TGATCA 1 cut(s) 64
Fnu4HI GCNGC 6 cut(s) 334, 888, 994, 2233, 2422, 2676
FokI GGATG 5 cut(s) 810, 1013, 1714, 1934, 3002
FriOI GRGCYC 1 cut(s) 2562
Fsp4HI GCNGC 6 cut(s) 334, 888, 994, 2233, 2422, 2676
GlaI GCGC 2 cut(s) 162, 1451
GluI GCNGC 6 cut(s) 334, 888, 994, 2233, 2422, 2676
GsuI CTGGAG 1 cut(s) 2424
HapII CCGG 1 cut(s) 1744
HgaI GACGC 3 cut(s) 1166, 2413, 3059
HhaI GCGC 2 cut(s) 163, 1452
Hin1I GRCGYC 1 cut(s) 2424
Hin6I GCGC 2 cut(s) 161, 1450
HinP1I GCGC 2 cut(s) 161, 1450
HincII GTYRAC 1 cut(s) 1786
HindII GTYRAC 1 cut(s) 1786
HindIII AAGCTT 1 cut(s) 1157
HpaII CCGG 1 cut(s) 1744
Hpy166II GTNNAC 3 cut(s) 1786, 3013, 3251
Hpy188I TCNGA 6 cut(s) 69, 1086, 1437, 1914, 2341, 2970
Hpy188III TCNNGA 8 cut(s) 16, 948, 1279, 1340, 1749, 2620, 3027, 3119
Hpy8I GTNNAC 3 cut(s) 1786, 3013, 3251
Hpy99I CGWCG 3 cut(s) 49, 2270, 2429
HpyCH4III ACNGT 3 cut(s) 289, 1461, 1508
HpyCH4IV ACGT 6 cut(s) 1220, 1262, 2006, 2285, 3296, 3343
HpyF10VI GCNNNNNNNGC 9 cut(s) 169, 720, 787, 2229, 2238, 2421, 2613, 2662, 3482
HpySE526I ACGT 6 cut(s) 1220, 1262, 2006, 2285, 3296, 3343
Hsp92I GRCGYC 1 cut(s) 2424
HspAI GCGC 2 cut(s) 161, 1450
KpnI GGTACC 1 cut(s) 2381
Ksp22I TGATCA 1 cut(s) 64
Kzo9I GATC 8 cut(s) 64, 880, 1755, 2121, 2428, 2475, 3064, 3407
LmnI GCTCC 8 cut(s) 382, 740, 787, 1174, 1894, 2157, 2172, 2565
Lsp1109I GCAGC 3 cut(s) 874, 2244, 2687
LweI GCATC 5 cut(s) 1736, 1943, 2137, 2577, 2625
MaeII ACGT 6 cut(s) 1220, 1262, 2006, 2285, 3296, 3343
MaeIII GTNAC 4 cut(s) 319, 593, 1330, 3139
MalI GATC 8 cut(s) 66, 882, 1757, 2123, 2430, 2477, 3066, 3409
MboI GATC 8 cut(s) 64, 880, 1755, 2121, 2428, 2475, 3064, 3407
MflI RGATCY 3 cut(s) 880, 2121, 3064
MhlI GDGCHC 2 cut(s) 1798, 2562
MlsI TGGCCA 1 cut(s) 2408
MluNI TGGCCA 1 cut(s) 2408
MlyI GAGTC 8 cut(s) 892, 1589, 1603, 1633, 1684, 1721, 2395, 2678
MmeI TCCRAC 1 cut(s) 1152
Mox20I TGGCCA 1 cut(s) 2408
Mph1103I ATGCAT 2 cut(s) 6, 1485
MroXI GAANNNNTTC 1 cut(s) 624
MscI TGGCCA 1 cut(s) 2408
MslI CAYNNNNRTG 1 cut(s) 690
Msp20I TGGCCA 1 cut(s) 2408
MspI CCGG 1 cut(s) 1744
MspR9I CCNGG 5 cut(s) 1744, 2509, 2661, 2723, 3061
Mva1269I GAATGC 1 cut(s) 3041
MvaI CCWGG 4 cut(s) 2509, 2661, 2723, 3061
MvnI CGCG 1 cut(s) 3053
MwoI GCNNNNNNNGC 9 cut(s) 169, 720, 787, 2229, 2238, 2421, 2613, 2662, 3482
NciI CCSGG 1 cut(s) 1744
NcoI CCATGG 1 cut(s) 2153
NdeI CATATG 4 cut(s) 783, 1422, 1485, 3071
NdeII GATC 8 cut(s) 64, 880, 1755, 2121, 2428, 2475, 3064, 3407
NlaIV GGNNCC 9 cut(s) 1989, 2105, 2159, 2379, 2561, 2727, 2736, 3066, 3220
NmeAIII GCCGAG 2 cut(s) 2143, 2711
NmuCI GTSAC 2 cut(s) 319, 1330
NsiI ATGCAT 2 cut(s) 6, 1485
NspI RCATGY 3 cut(s) 835, 1889, 2910
PaeI GCATGC 1 cut(s) 1889
PagI TCATGA 2 cut(s) 15, 1339
PceI AGGCCT 1 cut(s) 2639
PcsI WCGNNNNNNNCGW 1 cut(s) 1226
PctI GAATGC 1 cut(s) 3041
PdmI GAANNNNTTC 1 cut(s) 624
PfeI GAWTC 7 cut(s) 571, 1909, 2016, 2304, 2313, 2342, 2447
PflMI CCANNNNNTGG 3 cut(s) 2224, 2404, 2758
PkrI GCNGC 6 cut(s) 335, 889, 995, 2234, 2423, 2677
Ple19I CGATCG 1 cut(s) 2431
PleI GAGTC 8 cut(s) 892, 1588, 1602, 1632, 1683, 1720, 2394, 2677
PpsI GAGTC 8 cut(s) 892, 1588, 1602, 1632, 1683, 1720, 2394, 2677
Ppu21I YACGTR 1 cut(s) 2007
PpuMI RGGWCCY 1 cut(s) 704
PshBI ATTAAT 1 cut(s) 492
PsiI TTATAA 3 cut(s) 1554, 2844, 2903
Psp5II RGGWCCY 1 cut(s) 704
Psp6I CCWGG 4 cut(s) 2507, 2659, 2721, 3059
PspGI CCWGG 4 cut(s) 2507, 2659, 2721, 3059
PspN4I GGNNCC 9 cut(s) 1989, 2105, 2159, 2379, 2561, 2727, 2736, 3066, 3220
PspPPI RGGWCCY 1 cut(s) 704
PsrI GAACNNNNNNTAC 2 cut(s) 1744, 1776
PstI CTGCAG 2 cut(s) 2234, 2677
PsuI RGATCY 3 cut(s) 880, 2121, 3064
PvuI CGATCG 1 cut(s) 2431
RsaI GTAC 4 cut(s) 291, 2379, 3080, 3346
RsaNI GTAC 4 cut(s) 290, 2378, 3079, 3345
RseI CAYNNNNRTG 1 cut(s) 690
SatI GCNGC 6 cut(s) 334, 888, 994, 2233, 2422, 2676
Sau3AI GATC 8 cut(s) 64, 880, 1755, 2121, 2428, 2475, 3064, 3407
SchI GAGTC 8 cut(s) 892, 1589, 1603, 1633, 1684, 1721, 2395, 2678
ScrFI CCNGG 5 cut(s) 1744, 2509, 2661, 2723, 3061
SduI GDGCHC 2 cut(s) 1798, 2562
SfaNI GCATC 5 cut(s) 1736, 1943, 2137, 2577, 2625
SfcI CTRYAG 2 cut(s) 2230, 2673
SinI GGWCC 5 cut(s) 704, 1504, 1987, 2725, 3218
SmiMI CAYNNNNRTG 1 cut(s) 690
SmlI CTYRAG 1 cut(s) 1279
SmoI CTYRAG 1 cut(s) 1279
SnaBI TACGTA 1 cut(s) 2007
SpeI ACTAGT 1 cut(s) 1334
SphI GCATGC 1 cut(s) 1889
SseBI AGGCCT 1 cut(s) 2639
SsiI CCGC 4 cut(s) 333, 994, 1051, 2421
SspI AATATT 1 cut(s) 231
StuI AGGCCT 1 cut(s) 2639
StyD4I CCNGG 5 cut(s) 1742, 2507, 2659, 2721, 3059
StyI CCWWGG 5 cut(s) 145, 606, 1014, 2107, 2153
TaaI ACNGT 3 cut(s) 289, 1461, 1508
TaiI ACGT 6 cut(s) 1223, 1265, 2009, 2288, 3299, 3346
TaqI TCGA 4 cut(s) 2214, 2359, 2427, 2431
TauI GCSGC 3 cut(s) 336, 996, 2424
TfiI GAWTC 7 cut(s) 571, 1909, 2016, 2304, 2313, 2342, 2447
TscAI CASTG 3 cut(s) 2422, 2570, 2941
TseFI GTSAC 2 cut(s) 319, 1330
TseI GCWGC 3 cut(s) 887, 2232, 2675
Tsp45I GTSAC 2 cut(s) 319, 1330
TspGWI ACGGA 2 cut(s) 2000, 3047
TspRI CASTG 3 cut(s) 2422, 2570, 2941
Van91I CCANNNNNTGG 3 cut(s) 2224, 2404, 2758
VpaK11BI GGWCC 5 cut(s) 704, 1504, 1987, 2725, 3218
VspI ATTAAT 1 cut(s) 492
XbaI TCTAGA 2 cut(s) 947, 1748
XceI RCATGY 3 cut(s) 835, 1889, 2910
XcmI CCANNNNNNNNNTGG 2 cut(s) 2151, 2719
XmaJI CCTAGG 1 cut(s) 2107
XmnI GAANNNNTTC 1 cut(s) 624
Zsp2I ATGCAT 2 cut(s) 6, 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.