FvH4_5g38660

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000129
Physical Location & Seq
Forward (+)
28584549 .. 28588888
4340 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g38660.t1

Sequence Viewer

Length: 1566 bp
ATGCGTTTTGAACCGGTAGTGTTTGATTTCACTGGCCTAGATCGCAACCTTGGATCATGTTCTCATCTGCTTGTGATATTTAATATATCTAGATTCACGTTTCCGTCGTGGTGGTTAGTTGATTCAACTGAGGTGAGGGCTATATTTGAAACCACCAATCCATCCATGGTGTTTCAGAAATGTGGGGTTCGTCTAGTGTATGAGCAAGATGTTGCATTGTATTCCAGAATATTCAACCAGGATCAAGCGATTTCTCTGGAAAAGGTTGAGGACGAGACCTCTGTACCGGAATCTGCCTGGCTTAATCAATCTTTGATATGGGAGAAATTTATTCCACCTTCGGAAGAAGAATCCACACTCGTGGCGAGAAAAAACCTTGAGTCTGTTCTTCCAAGATACCTTGAGGCACTAAACAGTTATCCTGAATCCTACAAATTTAACCTCAGAGGAAGTCCAGGGTGGTTTGACCAGTCGTTTATCCCTGCTCATACGAGGTCAAATATGAGCAGTGTGTTAATCGAGCTGCCTCAAAATCTACAGAAGAGCAGGAAGTGGATGGGATTTGCAATATACGCATCACTTGTAGAGGAAGTGGGGCGGACGATGAAAACAGCCGACTATGGGGTATCTGTTAATCTAGAGTATGCGAATATATTATATTCGGTTGTTATTCCAGGACTTGAGCACGTCAGGCCATTGTCAGAAGAACATCATCAATTATTGGTTATTTACATACCGAGGGCAAAGATTCTCGAAGTGTTGTCCACTCAGACATTCACAACTGTTGCAATGGACTTTATCAGTGATAGCCCTCATGTAAAGGTTCAAAGATATGGTTTCCGTATTGTGTACCAGGAAGATATACAAGGGTTTGCTGATACGATTATCAGGTGTATGCAGAGGGATGATTCTCTTAAATCTTACGATAAGTTGGTTGTAGAGAAATGGATGCAGTTGCTACGATTGCAAGGTGCCCGTTTAGAGAGAATGACCAAACGAGATTCCAGAACCGCACAAGCAACCTTCAGAAATTGGGACTGGTCTGACCCTCGTTCTGCTTATTGTTTGTTCGATAGAGTTGAAATCTCGAAGTTGAAATGGTTCGTGCCTTTCATCAACCAAGGCAACTCTGCCGAAATCCAACTGCCTCCGAATGTGTTTGATAATCATAATTGGTTGGGGTTTGCTGTGTGTGTTCAGTGCTCCCGCTCTTCTTCTTCTTCAGAGGATGTTGTGCTTGCTTATCGACTGGACTCTGATGTTGCTTGGCACGGCTTATTTGATTACAAGATGCGAGCAGTTATGAAGCTGCTCGAGACACCTAAAGATGAATTATATGATGCGACTATGTTCCTTTATATGCCGCGCACTAAAGTTCTTATGAGTAAGATGTGGAGGCAATGCAAATTGGCCAGGATAACTGTGTGGTTGTCCAACCCATGCGCAGCAATAGTGCATACTTGTGCCCTTCGTCTACTATTTAAGGACGACATTGAACATCTAGTTGAGACACTCACTATTGCATCTGACGAAAACCGTTATTTCCTCGGTCTCACTGCTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

522

Amino Acids

60.43

Weight (kDa)

6.0

Isoelectric Point (pI)

47.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 371 - 498 1.7e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1444
AccB1I GGYRCC 1 cut(s) 971
AccBSI CCGCTC 1 cut(s) 1209
AccI GTMKAC 1 cut(s) 1474
AccII CGCG 1 cut(s) 1366
AciI CCGC 4 cut(s) 598, 1011, 1207, 1364
AclWI GGATC 2 cut(s) 61, 249
AcoI YGGCCR 1 cut(s) 1410
AcsI RAATTY 2 cut(s) 326, 434
AcuI CTGAAG 2 cut(s) 1009, 1206
AfaI GTAC 2 cut(s) 285, 851
AfiI CCNNNNNNNGG 1 cut(s) 621
AgeI ACCGGT 1 cut(s) 13
AgsI TTSAA 8 cut(s) 11, 126, 149, 235, 827, 1082, 1096, 1496
AjiI CACGTC 1 cut(s) 688
AjnI CCWGG 6 cut(s) 237, 296, 454, 673, 852, 1412
AleI CACNNNNGTG 1 cut(s) 359
AluBI AGCT 2 cut(s) 523, 1309
AluI AGCT 2 cut(s) 523, 1309
Alw21I GWGCWC 2 cut(s) 687, 1205
Alw26I GTCTC 4 cut(s) 269, 1310, 1502, 1556
AlwI GGATC 2 cut(s) 61, 249
Ama87I CYCGRG 1 cut(s) 1313
AoxI GGCC 3 cut(s) 34, 692, 1410
ApeKI GCWGC 3 cut(s) 523, 1309, 1445
ApoI RAATTY 2 cut(s) 326, 434
AsiGI ACCGGT 1 cut(s) 13
Asp700I GAANNNNTTC 1 cut(s) 1100
AspLEI GCGC 2 cut(s) 1368, 1445
AsuHPI GGTGA 1 cut(s) 145
AvaI CYCGRG 1 cut(s) 1313
BaeGI GKGCMC 2 cut(s) 976, 1468
BaeI ACNNNNGTAYC 2 cut(s) 267, 300
BalI TGGCCA 1 cut(s) 1412
BanI GGYRCC 1 cut(s) 971
BauI CACGAG 1 cut(s) 359
Bbv12I GWGCWC 2 cut(s) 687, 1205
BbvI GCAGC 3 cut(s) 510, 1296, 1457
BccI CCATC 2 cut(s) 169, 550
BceAI ACGGC 1 cut(s) 1288
BciT130I CCWGG 6 cut(s) 239, 298, 456, 675, 854, 1414
BcoDI GTCTC 4 cut(s) 269, 1310, 1502, 1556
BfaI CTAG 5 cut(s) 38, 90, 194, 638, 1502
BfmI CTRYAG 1 cut(s) 536
BisI GCNGC 4 cut(s) 524, 1310, 1364, 1446
BlsI GCNGC 4 cut(s) 525, 1311, 1365, 1447
Bme1390I CCNGG 6 cut(s) 239, 298, 456, 675, 854, 1414
BmeT110I CYCGRG 1 cut(s) 1313
BmgBI CACGTC 1 cut(s) 688
BmiI GGNNCC 1 cut(s) 973
BmrFI CCNGG 6 cut(s) 239, 298, 456, 675, 854, 1414
BmsI GCATC 5 cut(s) 584, 939, 1281, 1330, 1532
BpuEI CTTGAG 3 cut(s) 398, 422, 701
BsaI GGTCTC 2 cut(s) 269, 1556
BsaJI CCNNGG 6 cut(s) 49, 165, 455, 737, 1120, 1546
BsaWI WCCGGW 2 cut(s) 13, 286
Bsc4I CCNNNNNNNGG 1 cut(s) 621
Bse118I RCCGGY 1 cut(s) 13
Bse1I ACTGG 4 cut(s) 37, 469, 1043, 1254
Bse3DI GCAATG 2 cut(s) 795, 1406
BseBI CCWGG 6 cut(s) 239, 298, 456, 675, 854, 1414
BseDI CCNNGG 6 cut(s) 49, 165, 455, 737, 1120, 1546
BseGI GGATG 5 cut(s) 161, 561, 910, 954, 1234
BseLI CCNNNNNNNGG 1 cut(s) 621
BseMI GCAATG 2 cut(s) 795, 1406
BseMII CTCAG 3 cut(s) 120, 457, 782
BseNI ACTGG 4 cut(s) 37, 469, 1043, 1254
BseSI GKGCMC 2 cut(s) 976, 1468
BseXI GCAGC 3 cut(s) 510, 1296, 1457
Bsh1236I CGCG 1 cut(s) 1366
BshFI GGCC 3 cut(s) 36, 694, 1412
BshNI GGYRCC 1 cut(s) 971
BshTI ACCGGT 1 cut(s) 13
BsiHKAI GWGCWC 2 cut(s) 687, 1205
BsiHKCI CYCGRG 1 cut(s) 1313
BsiSI CCGG 2 cut(s) 14, 287
BslFI GGGAC 1 cut(s) 1049
BslI CCNNNNNNNGG 1 cut(s) 621
BsmAI GTCTC 4 cut(s) 269, 1310, 1502, 1556
BsmFI GGGAC 1 cut(s) 1049
BsnI GGCC 3 cut(s) 36, 694, 1412
Bso31I GGTCTC 2 cut(s) 269, 1556
BsoBI CYCGRG 1 cut(s) 1313
Bsp1286I GDGCHC 4 cut(s) 687, 976, 1205, 1468
Bsp143I GATC 3 cut(s) 40, 53, 241
Bsp19I CCATGG 1 cut(s) 165
BspACI CCGC 4 cut(s) 598, 1011, 1207, 1364
BspANI GGCC 3 cut(s) 36, 694, 1412
BspCNI CTCAG 3 cut(s) 121, 456, 781
BspFNI CGCG 1 cut(s) 1366
BspLI GGNNCC 1 cut(s) 973
BspPI GGATC 2 cut(s) 61, 249
BspQI GCTCTTC 2 cut(s) 536, 1216
BspT107I GGYRCC 1 cut(s) 971
BspTNI GGTCTC 2 cut(s) 269, 1556
BsrBI CCGCTC 1 cut(s) 1209
BsrDI GCAATG 2 cut(s) 795, 1406
BsrFI RCCGGY 1 cut(s) 13
BsrI ACTGG 4 cut(s) 37, 469, 1043, 1254
BssAI RCCGGY 1 cut(s) 13
BssECI CCNNGG 6 cut(s) 49, 165, 455, 737, 1120, 1546
BssMI GATC 3 cut(s) 40, 53, 241
BssSI CACGAG 1 cut(s) 359
BssT1I CCWWGG 3 cut(s) 49, 165, 1120
Bst2BI CACGAG 1 cut(s) 359
Bst2UI CCWGG 6 cut(s) 239, 298, 456, 675, 854, 1414
Bst4CI ACNGT 4 cut(s) 416, 784, 1423, 1538
Bst6I CTCTTC 2 cut(s) 536, 1216
BstC8I GCNNGC 2 cut(s) 1239, 1296
BstDEI CTNAG 3 cut(s) 129, 443, 768
BstDSI CCRYGG 1 cut(s) 165
BstF5I GGATG 5 cut(s) 161, 561, 910, 954, 1234
BstFNI CGCG 1 cut(s) 1366
BstHHI GCGC 2 cut(s) 1368, 1445
BstKTI GATC 3 cut(s) 43, 56, 244
BstMAI GTCTC 4 cut(s) 269, 1310, 1502, 1556
BstMBI GATC 3 cut(s) 40, 53, 241
BstMWI GCNNNNNNNGC 4 cut(s) 42, 572, 691, 964
BstNI CCWGG 6 cut(s) 239, 298, 456, 675, 854, 1414
BstSCI CCNGG 6 cut(s) 237, 296, 454, 673, 852, 1412
BstSFI CTRYAG 1 cut(s) 536
BstSLI GKGCMC 2 cut(s) 976, 1468
BstUI CGCG 1 cut(s) 1366
BstV1I GCAGC 3 cut(s) 510, 1296, 1457
BstXI CCANNNNNNTGG 1 cut(s) 361
BsuRI GGCC 3 cut(s) 36, 694, 1412
BtgI CCRYGG 1 cut(s) 165
BtrI CACGTC 1 cut(s) 688
BtsCI GGATG 5 cut(s) 161, 561, 910, 954, 1234
BtsI GCAGTG 2 cut(s) 514, 1554
BtsIMutI CAGTG 5 cut(s) 30, 514, 808, 1205, 1554
Cac8I GCNNGC 2 cut(s) 1239, 1296
CfoI GCGC 2 cut(s) 1368, 1445
Cfr10I RCCGGY 1 cut(s) 13
Csp6I GTAC 2 cut(s) 284, 850
CspAI ACCGGT 1 cut(s) 13
CviAII CATG 4 cut(s) 57, 166, 815, 1440
CviQI GTAC 2 cut(s) 284, 850
DdeI CTNAG 3 cut(s) 129, 443, 768
DpnI GATC 3 cut(s) 42, 55, 243
DpnII GATC 3 cut(s) 40, 53, 241
EaeI YGGCCR 1 cut(s) 1410
Eam1104I CTCTTC 2 cut(s) 536, 1216
EarI CTCTTC 2 cut(s) 536, 1216
EciI GGCGGA 1 cut(s) 613
Eco130I CCWWGG 3 cut(s) 49, 165, 1120
Eco31I GGTCTC 2 cut(s) 269, 1556
Eco57I CTGAAG 2 cut(s) 1009, 1206
Eco88I CYCGRG 1 cut(s) 1313
EcoRII CCWGG 6 cut(s) 237, 296, 454, 673, 852, 1412
EcoT14I CCWWGG 3 cut(s) 49, 165, 1120
ErhI CCWWGG 3 cut(s) 49, 165, 1120
FaeI CATG 4 cut(s) 60, 169, 818, 1443
FaqI GGGAC 1 cut(s) 1049
FatI CATG 4 cut(s) 56, 165, 814, 1439
FauI CCCGC 1 cut(s) 1214
FblI GTMKAC 1 cut(s) 1474
Fnu4HI GCNGC 4 cut(s) 524, 1310, 1364, 1446
FokI GGATG 5 cut(s) 148, 568, 917, 961, 1241
Fsp4HI GCNGC 4 cut(s) 524, 1310, 1364, 1446
FspBI CTAG 5 cut(s) 38, 90, 194, 638, 1502
FspI TGCGCA 1 cut(s) 1444
GlaI GCGC 2 cut(s) 1367, 1444
GluI GCNGC 4 cut(s) 524, 1310, 1364, 1446
HaeIII GGCC 3 cut(s) 36, 694, 1412
HapII CCGG 2 cut(s) 14, 287
HhaI GCGC 2 cut(s) 1368, 1445
Hin1II CATG 4 cut(s) 60, 169, 818, 1443
Hin6I GCGC 2 cut(s) 1366, 1443
HinP1I GCGC 2 cut(s) 1366, 1443
HpaII CCGG 2 cut(s) 14, 287
HphI GGTGA 1 cut(s) 145
Hpy166II GTNNAC 3 cut(s) 765, 850, 1475
Hpy188III TCNNGA 9 cut(s) 90, 225, 257, 422, 638, 752, 1005, 1087, 1315
Hpy8I GTNNAC 3 cut(s) 765, 850, 1475
Hpy99I CGWCG 1 cut(s) 109
HpyAV CCTTC 3 cut(s) 348, 1033, 1478
HpyCH4III ACNGT 4 cut(s) 416, 784, 1423, 1538
HpyCH4IV ACGT 2 cut(s) 98, 687
HpyCH4V TGCA 9 cut(s) 215, 566, 788, 898, 952, 967, 1404, 1456, 1523
HpyF10VI GCNNNNNNNGC 4 cut(s) 42, 572, 691, 964
HpyF3I CTNAG 3 cut(s) 129, 443, 768
HpySE526I ACGT 2 cut(s) 98, 687
Hsp92II CATG 4 cut(s) 60, 169, 818, 1443
HspAI GCGC 2 cut(s) 1366, 1443
Kzo9I GATC 3 cut(s) 40, 53, 241
LguI GCTCTTC 2 cut(s) 536, 1216
LmnI GCTCC 1 cut(s) 1208
Lsp1109I GCAGC 3 cut(s) 510, 1296, 1457
LweI GCATC 5 cut(s) 584, 939, 1281, 1330, 1532
MaeI CTAG 5 cut(s) 38, 90, 194, 638, 1502
MaeII ACGT 2 cut(s) 98, 687
MalI GATC 3 cut(s) 42, 55, 243
MbiI CCGCTC 1 cut(s) 1209
MboI GATC 3 cut(s) 40, 53, 241
MhlI GDGCHC 4 cut(s) 687, 976, 1205, 1468
MlsI TGGCCA 1 cut(s) 1412
MluCI AATT 7 cut(s) 326, 434, 716, 1030, 1171, 1331, 1406
MluNI TGGCCA 1 cut(s) 1412
MlyI GAGTC 2 cut(s) 389, 1247
MmeI TCCRAC 2 cut(s) 1165, 1458
Mox20I TGGCCA 1 cut(s) 1412
MroXI GAANNNNTTC 1 cut(s) 1100
MscI TGGCCA 1 cut(s) 1412
MseI TTAA 7 cut(s) 81, 303, 438, 515, 633, 915, 1482
MslI CAYNNNNRTG 2 cut(s) 359, 1461
Msp20I TGGCCA 1 cut(s) 1412
MspI CCGG 2 cut(s) 14, 287
MspR9I CCNGG 6 cut(s) 239, 298, 456, 675, 854, 1414
MvaI CCWGG 6 cut(s) 239, 298, 456, 675, 854, 1414
MvnI CGCG 1 cut(s) 1366
MwoI GCNNNNNNNGC 4 cut(s) 42, 572, 691, 964
NcoI CCATGG 1 cut(s) 165
NdeII GATC 3 cut(s) 40, 53, 241
NlaIII CATG 4 cut(s) 60, 169, 818, 1443
NlaIV GGNNCC 1 cut(s) 973
NsbI TGCGCA 1 cut(s) 1444
OliI CACNNNNGTG 1 cut(s) 359
PaeR7I CTCGAG 1 cut(s) 1313
PciSI GCTCTTC 2 cut(s) 536, 1216
PcsI WCGNNNNNNNCGW 1 cut(s) 104
PdmI GAANNNNTTC 1 cut(s) 1100
PfeI GAWTC 8 cut(s) 93, 122, 290, 350, 425, 748, 908, 1001
PfoI TCCNGGA 1 cut(s) 673
PinAI ACCGGT 1 cut(s) 13
PkrI GCNGC 4 cut(s) 525, 1311, 1365, 1447
PleI GAGTC 2 cut(s) 388, 1247
PpsI GAGTC 2 cut(s) 388, 1247
Psp6I CCWGG 6 cut(s) 237, 296, 454, 673, 852, 1412
PspGI CCWGG 6 cut(s) 237, 296, 454, 673, 852, 1412
PspN4I GGNNCC 1 cut(s) 973
RsaI GTAC 2 cut(s) 285, 851
RsaNI GTAC 2 cut(s) 284, 850
RseI CAYNNNNRTG 2 cut(s) 359, 1461
SapI GCTCTTC 2 cut(s) 536, 1216
SaqAI TTAA 7 cut(s) 81, 303, 438, 515, 633, 915, 1482
SatI GCNGC 4 cut(s) 524, 1310, 1364, 1446
Sau3AI GATC 3 cut(s) 40, 53, 241
SchI GAGTC 2 cut(s) 389, 1247
ScrFI CCNGG 6 cut(s) 239, 298, 456, 675, 854, 1414
SduI GDGCHC 4 cut(s) 687, 976, 1205, 1468
SfaNI GCATC 5 cut(s) 584, 939, 1281, 1330, 1532
SfcI CTRYAG 1 cut(s) 536
Sfr274I CTCGAG 1 cut(s) 1313
SlaI CTCGAG 1 cut(s) 1313
SmiMI CAYNNNNRTG 2 cut(s) 359, 1461
SmlI CTYRAG 4 cut(s) 377, 401, 680, 1313
SmoI CTYRAG 4 cut(s) 377, 401, 680, 1313
Sse9I AATT 7 cut(s) 326, 434, 716, 1030, 1171, 1331, 1406
SsiI CCGC 4 cut(s) 598, 1011, 1207, 1364
SspI AATATT 1 cut(s) 231
SspMI CTAG 5 cut(s) 38, 90, 194, 638, 1502
StyD4I CCNGG 6 cut(s) 237, 296, 454, 673, 852, 1412
StyI CCWWGG 3 cut(s) 49, 165, 1120
TaaI ACNGT 4 cut(s) 416, 784, 1423, 1538
TaiI ACGT 2 cut(s) 101, 690
TaqI TCGA 6 cut(s) 519, 753, 1071, 1088, 1246, 1314
TaqII GACCGA 1 cut(s) 1538
TasI AATT 7 cut(s) 326, 434, 716, 1030, 1171, 1331, 1406
TauI GCSGC 1 cut(s) 1366
TfiI GAWTC 8 cut(s) 93, 122, 290, 350, 425, 748, 908, 1001
Tru1I TTAA 7 cut(s) 81, 303, 438, 515, 633, 915, 1482
Tru9I TTAA 7 cut(s) 81, 303, 438, 515, 633, 915, 1482
TscAI CASTG 5 cut(s) 37, 514, 808, 1205, 1561
TseI GCWGC 3 cut(s) 523, 1309, 1445
TspDTI ATGAA 4 cut(s) 620, 1102, 1319, 1344
TspGWI ACGGA 2 cut(s) 93, 830
TspRI CASTG 5 cut(s) 37, 514, 808, 1205, 1561
XapI RAATTY 2 cut(s) 326, 434
XbaI TCTAGA 2 cut(s) 89, 637
XcmI CCANNNNNNNNNTGG 1 cut(s) 163
XhoI CTCGAG 1 cut(s) 1313
XmiI GTMKAC 1 cut(s) 1474
XmnI GAANNNNTTC 1 cut(s) 1100
XspI CTAG 5 cut(s) 38, 90, 194, 638, 1502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.