Rmu_sc0002551.1_g000001

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002551.1
OG0000129
Physical Location & Seq
Forward (+)
1 .. 4830
4830 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002551.1_g000001.1.cds

Sequence Viewer

Length: 3935 bp
aattggaagcattgtgtgatagggaatcgtttggtccagggagtagaatcatcataacttctagaaatgaacatttgctcaatgcagttgaaggagataaagtgtacaaggtgaatccattaagtgatgctgaagctcttcagcttttcagtatgaaagccttcaagaaagaccagcaggttgggaaagaatttctccagctatccaaggaatttttgaaatatgctgatggccttccactagctattaaagttttgggttcctctgttcgtggtaaaaatgtaaaattatggtctagtgcattgaatagacttaataaaaaccctcaaaatcaaaaaaagattatttatgttcttaaagtcagttttgatggattagaagaaacagaaaagaaaacgtttttggacatcgcgtgtttctttaaaggagagaacaaggatcgtgtaataagaatactaaatggttgtgacgatgacggtgtcgagatggatgtacaagttcttatggacaaatctttggtaactctatttggaacaaaattgtggatgcatgatttgatacaagaaatgggtcggaatgttgttcttcaagaatctcctaatcctggagaacgtagcagattgtggcttccaaatgagattatccctgtacttgatcggagtaaggcgacgagtgaagttcaaagcatattcctccaatgtccaacagaagacgatgttgttcactcaattgataatgccttctcaaatatggacagattgagattgctcaagattgtgaatgtgaacttttccggaaacatcacatatctttctaatgagttacaatatcttgaatggaaagactgtcctttggtttctttcccgtcagactttcaaccggagaaactcgttgaagtttgcatgtattttagccgcattgaacaactatggaaggggaaaaaaggatggagcatgctacggcatttagatctgactggttcaccattcttgatgtcgactccagacttcactgaggttccagatcttgaagagttggtgcttcaatgttgtttaggcttggtggaagttcatccatctcttggatttctgaagaaacttgtctatttgaatatgagaaattgcgagtctattgagagcattccacctttcactgcccttgaatcccttcaaatagtgtgtctttcatcctgttcaggactgaagaagtttccagaaattgaaggaaatatgaaaagcttgctggagcttcatttggatgggaccagcattgagtcattgcctccatcaattgaacgcttgactggtcttaccattttgaatctagcaggctgtaaaaaccttttgcatcttcccaataccattggctgcttgacatctttgaaaagtctccatctaactggttgctacaaaattgatgagatacctgagaatctgaatggtatgaaatgtctggagagccttgcaattgatggaacttccataagggagttatccttcattctaggcatgaagaatctacagtatctatcctgcgaaggatgtaaatgtctagttccagaatcatgcaaagttctggcttcgttaccgaatttgttagagctagacttaagttattgcaatctgatggatggagcaattctcaatgattttagcaacctaatctccttaagaatgttagctttaagtggtaattgctttgtacgattacctgaaagtatctctcaactctcaaagctcaacactctgcgcttgaataattgcagacagcttcagttgctgcccaagaagcttccgttaagtctccagtacgtatatgcacaagattgtacttcactgacggattacccaaatcaaatcaaagtattgaattcatcggagtcgggagtgactgttgtcaattccctcaattcttcagaacctggagtcccacaaagttccgaaatgttagataatttaagagatgagtggaaatctatagacctgtgttccacaatgtatgctaatccagaaaatgtggggcaatcttcccaagtgcgtgtgacatgtaagcatacaggggggaaacaagttgatgttgatcatttgccactgacagctctagcgtctataaaacaaatgccttttgagtcagatgtaaggatcgtatatcctggagatgaaattccagagtggttcagcactatatctaccagaaatcccatatcaatctcgatacctcaaaatctggtcgatgataacaagtggaagggatttgccgcgtgtgctatattctcagtcatggggcatactgctctctctgttattgaaccggattctgattttcttaattactcgtatcaaatcacattggaaactgatgttatgcatctggatccatttcgggtgttgggagtggatttaggcggctgtagatcaagttctcatctgcttgtgattttcggtatatctagttcgaagtttccacagagggggttaaatcaatcaactgtggtgagggctatatttgaaaccaccaatccatccatggtggtccagaaatgtggaattcgtctactctatgagcaagatgctggatggcatttcaaaatagcctggggcgatgatcatccgatttgtctgaataaagttgaggacgccgcctctgtaccgcagtctgcctgctggcttaatcaatctttggaatgggagaaattcataccacccttggaagaagaatccacacttgtgctgataaagaaccttcagtctgttcttccaagataccttgaggcactaaacagtgattctaaaacgttcgaatttaacctcagaggaagcccagggtggtttcataactctgcctttggtacgaggtcacaggtggcccgaatggcccgaatgtcaattgagctgcctcaaaatctacacaaaagcaagaagtggatgggatttgcaatatacgcatcacttgtagaggaagtgagccagacaatgaaagaggacgactatctggtatttgttacactaataagtggggataaattatttccggttgtgggcctaggacttgagcacgttaggccattgtcagaagaacatcatcaactattggtttcttacataccgcggccacagattcccgaagtgttcactcagacattaacaactacaatgatcagtgttgatagccctcatgtaaaggttcaaagatgtgggttccatattgtgtttcaggaagatatacaagggtttgctgatacaatcatccagtgcatgcagagggaaaattcgcttgaatctcacgataagttggtggtagaagcatggatagagttgatacgattgcaaggtgcccatatagagggaatgaaagaacgggattccagaaccccacgggaaaaatactttgaattgcactcacgaaaatatagaaattgggactggtctgaccctcgtcctccttattgtgtcttcgagagagttgaaatctccaagttgaaatggttcatgcctttcatcaaccaaggcaactcagcagaaacccaacttcctctgaatgtgttcaatgatgataattggttggggtttgctgtatgttctcggttgtcgcacgaccagtatccaaacattagtcttggcaatactgcttctgattcagaggatgttatgcttacttgccgtctggactcggacgtttcttggcagggcttatttaatttccagatgcatttaggtttaaagattcgagaggcatcggaatccaatgagacttgtttcttttatataccgcgcactaaagttcggagtaaggtttggaggcaatgcaaattggccaggataactatgtggttttctagcccatgcttagcagtgcatagttgtgcccttcgtctactatttaaggaggacattgaacatcttgtagaaacactgaccctcgccgaattaccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

1310

Amino Acids

148.29

Weight (kDa)

5.55

Isoelectric Point (pI)

47.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 168
AccB1I GGYRCC 1 cut(s) 3331
AccB7I CCANNNNNTGG 1 cut(s) 1081
AccI GTMKAC 3 cut(s) 997, 2553, 3873
AccII CGCG 4 cut(s) 412, 2260, 3108, 3771
AccIII TCCGGA 1 cut(s) 793
AciI CCGC 8 cut(s) 915, 2258, 2405, 2639, 2650, 3106, 3108, 3769
AclI AACGTT 2 cut(s) 397, 2794
AclWI GGATC 4 cut(s) 446, 2149, 2368, 2381
AcoI YGGCCR 2 cut(s) 3109, 3812
AcsI RAATTY 9 cut(s) 190, 211, 1590, 1869, 2162, 2546, 2692, 2800, 3267
AcuI CTGAAG 7 cut(s) 124, 152, 1111, 1222, 1756, 1898, 2728
AcyI GRCGYC 1 cut(s) 2636
AfaI GTAC 8 cut(s) 106, 494, 650, 1703, 1810, 1830, 2648, 2850
AfiI CCNNNNNNNGG 5 cut(s) 604, 1081, 2470, 3037, 3342
AflII CTTAAG 2 cut(s) 1608, 1668
AflIII ACRYGT 1 cut(s) 2044
AjnI CCWGG 7 cut(s) 36, 603, 1920, 2151, 2593, 2820, 3814
AjuI GAANNNNNNNTTGG 2 cut(s) 385, 417
AleI CACNNNNGTG 1 cut(s) 2725
AloI GAACNNNNNNTCC 2 cut(s) 1910, 1942
Alw21I GWGCWC 1 cut(s) 3056
Alw26I GTCTC 3 cut(s) 1393, 1807, 3742
AlwI GGATC 4 cut(s) 446, 2149, 2368, 2381
AlwNI CAGNNNCTG 2 cut(s) 1779, 1921
Aor13HI TCCGGA 1 cut(s) 793
AoxI GGCC 7 cut(s) 231, 2864, 2873, 3039, 3061, 3109, 3812
ApeKI GCWGC 3 cut(s) 1367, 1779, 2892
ApoI RAATTY 9 cut(s) 190, 211, 1590, 1869, 2162, 2546, 2692, 2800, 3267
ArsI GACNNNNNNTTYG 2 cut(s) 1164, 1196
Asp700I GAANNNNTTC 5 cut(s) 137, 160, 1166, 3484, 3541
AspA2I CCTAGG 1 cut(s) 3042
AspLEI GCGC 2 cut(s) 1751, 3773
AspS9I GGNCC 6 cut(s) 34, 1262, 2532, 2865, 2874, 3039
AsuHPI GGTGA 3 cut(s) 123, 974, 2505
AsuII TTCGAA 2 cut(s) 2455, 2798
AvaII GGWCC 3 cut(s) 34, 1262, 2532
AvrII CCTAGG 1 cut(s) 3042
BaeGI GKGCMC 2 cut(s) 3336, 3867
BalI TGGCCA 1 cut(s) 3814
BamHI GGATCC 1 cut(s) 2373
BanI GGYRCC 1 cut(s) 3331
BbsI GAAGAC 2 cut(s) 716, 3444
Bbv12I GWGCWC 1 cut(s) 3056
BbvI GCAGC 3 cut(s) 1354, 1766, 2879
BceAI ACGGC 2 cut(s) 976, 3644
BciT130I CCWGG 7 cut(s) 38, 605, 1922, 2153, 2595, 2822, 3816
BciVI GTATCC 1 cut(s) 3611
BclI TGATCA 3 cut(s) 2079, 2604, 3155
BcoDI GTCTC 3 cut(s) 1393, 1807, 3742
BfmI CTRYAG 3 cut(s) 1519, 1976, 2409
BfrI CTTAAG 2 cut(s) 1608, 1668
BfuAI ACCTGC 1 cut(s) 168
BfuI GTATCC 1 cut(s) 3611
BglI GCCNNNNNGGC 1 cut(s) 2872
BglII AGATCT 2 cut(s) 969, 1023
BisI GCNGC 8 cut(s) 915, 1368, 1780, 2258, 2406, 2639, 2893, 3109
BlnI CCTAGG 1 cut(s) 3042
BlpI GCTNAGC 1 cut(s) 3846
BlsI GCNGC 8 cut(s) 916, 1369, 1781, 2259, 2407, 2640, 2894, 3110
Bme1390I CCNGG 7 cut(s) 38, 605, 1922, 2153, 2595, 2822, 3816
Bme18I GGWCC 3 cut(s) 34, 1262, 2532
BmgT120I GGNCC 6 cut(s) 34, 1262, 2532, 2865, 2874, 3039
BmiI GGNNCC 6 cut(s) 261, 1019, 1263, 2375, 3199, 3333
BmrFI CCNGG 7 cut(s) 38, 605, 1922, 2153, 2595, 2822, 3816
BmsI GCATC 8 cut(s) 117, 536, 1356, 2376, 2559, 2953, 3695, 3742
BoxI GACNNNNGTC 2 cut(s) 1894, 3434
BpiI GAAGAC 2 cut(s) 716, 3444
BplI GAGNNNNNCTC 2 cut(s) 1625, 1657
BpmI CTGGAG 8 cut(s) 181, 626, 986, 1264, 1474, 1789, 1943, 2174
Bpu1102I GCTNAGC 1 cut(s) 3846
Bpu14I TTCGAA 2 cut(s) 2455, 2798
BpuEI CTTGAG 3 cut(s) 754, 2788, 3070
BsaAI YACGTR 1 cut(s) 1812
BsaBI GATNNNNATC 2 cut(s) 2078, 2606
BsaHI GRCGYC 1 cut(s) 2636
BsaWI WCCGGW 4 cut(s) 793, 879, 2310, 3030
BsaXI ACNNNNNCTCC 6 cut(s) 86, 116, 1648, 1678, 1877, 1907
Bsc4I CCNNNNNNNGG 5 cut(s) 604, 1081, 2470, 3037, 3342
Bse1I ACTGG 7 cut(s) 981, 1308, 1404, 1806, 3249, 3427, 3597
Bse3DI GCAATG 2 cut(s) 1276, 3808
Bse8I GATNNNNATC 2 cut(s) 2078, 2606
BseAI TCCGGA 1 cut(s) 793
BseBI CCWGG 7 cut(s) 38, 605, 1922, 2153, 2595, 2822, 3816
BseJI GATNNNNATC 2 cut(s) 2078, 2606
BseLI CCNNNNNNNGG 5 cut(s) 604, 1081, 2470, 3037, 3342
BseMI GCAATG 2 cut(s) 1276, 3808
BseMII CTCAG 6 cut(s) 1004, 1418, 2288, 2823, 3148, 3527
BseNI ACTGG 7 cut(s) 981, 1308, 1404, 1806, 3249, 3427, 3597
BseSI GKGCMC 2 cut(s) 3336, 3867
BseXI GCAGC 3 cut(s) 1354, 1766, 2879
Bsh1236I CGCG 4 cut(s) 412, 2260, 3108, 3771
BshFI GGCC 7 cut(s) 233, 2866, 2875, 3041, 3063, 3111, 3814
BshNI GGYRCC 1 cut(s) 3331
BsiHKAI GWGCWC 1 cut(s) 3056
BsiSI CCGG 4 cut(s) 794, 880, 2311, 3031
BslFI GGGAC 3 cut(s) 1275, 1912, 3433
BslI CCNNNNNNNGG 5 cut(s) 604, 1081, 2470, 3037, 3342
BsmAI GTCTC 3 cut(s) 1393, 1807, 3742
BsmFI GGGAC 3 cut(s) 1275, 1912, 3433
BsmI GAATGC 1 cut(s) 1139
BsnI GGCC 7 cut(s) 233, 2866, 2875, 3041, 3063, 3111, 3814
Bsp119I TTCGAA 2 cut(s) 2455, 2798
Bsp1286I GDGCHC 3 cut(s) 3056, 3336, 3867
Bsp13I TCCGGA 1 cut(s) 793
Bsp1407I TGTACA 2 cut(s) 104, 492
Bsp1720I GCTNAGC 1 cut(s) 3846
Bsp19I CCATGG 1 cut(s) 2525
BspACI CCGC 8 cut(s) 915, 2258, 2405, 2639, 2650, 3106, 3108, 3769
BspANI GGCC 7 cut(s) 233, 2866, 2875, 3041, 3063, 3111, 3814
BspCNI CTCAG 6 cut(s) 1005, 1419, 2287, 2822, 3147, 3526
BspEI TCCGGA 1 cut(s) 793
BspFNI CGCG 4 cut(s) 412, 2260, 3108, 3771
BspLI GGNNCC 6 cut(s) 261, 1019, 1263, 2375, 3199, 3333
BspMI ACCTGC 1 cut(s) 168
BspPI GGATC 4 cut(s) 446, 2149, 2368, 2381
BspQI GCTCTTC 1 cut(s) 143
BspT104I TTCGAA 2 cut(s) 2455, 2798
BspT107I GGYRCC 1 cut(s) 3331
BspTI CTTAAG 2 cut(s) 1608, 1668
BsrDI GCAATG 2 cut(s) 1276, 3808
BsrGI TGTACA 2 cut(s) 104, 492
BsrI ACTGG 7 cut(s) 981, 1308, 1404, 1806, 3249, 3427, 3597
BssNI GRCGYC 1 cut(s) 2636
BssT1I CCWWGG 5 cut(s) 206, 2525, 2705, 3042, 3504
Bst2UI CCWGG 7 cut(s) 38, 605, 1922, 2153, 2595, 2822, 3816
Bst4CI ACNGT 6 cut(s) 478, 847, 1523, 1893, 2490, 2782
Bst6I CTCTTC 2 cut(s) 143, 1025
BstACI GRCGYC 1 cut(s) 2636
BstAFI CTTAAG 2 cut(s) 1608, 1668
BstAUI TGTACA 2 cut(s) 104, 492
BstBAI YACGTR 1 cut(s) 1812
BstBI TTCGAA 2 cut(s) 2455, 2798
BstC8I GCNNGC 6 cut(s) 955, 1240, 1329, 2661, 2665, 3256
BstDEI CTNAG 7 cut(s) 1013, 1427, 2274, 2809, 3134, 3513, 3846
BstDSI CCRYGG 3 cut(s) 2525, 3106, 3373
BstFNI CGCG 4 cut(s) 412, 2260, 3108, 3771
BstHHI GCGC 2 cut(s) 1751, 3773
BstMAI GTCTC 3 cut(s) 1393, 1807, 3742
BstMWI GCNNNNNNNGC 6 cut(s) 1776, 1788, 2263, 2872, 2941, 3060
BstNI CCWGG 7 cut(s) 38, 605, 1922, 2153, 2595, 2822, 3816
BstNSI RCATGY 4 cut(s) 906, 957, 2048, 3258
BstPAI GACNNNNGTC 2 cut(s) 1894, 3434
BstSCI CCNGG 7 cut(s) 36, 603, 1920, 2151, 2593, 2820, 3814
BstSFI CTRYAG 3 cut(s) 1519, 1976, 2409
BstSLI GKGCMC 2 cut(s) 3336, 3867
BstSNI TACGTA 1 cut(s) 1812
BstUI CGCG 4 cut(s) 412, 2260, 3108, 3771
BstV1I GCAGC 3 cut(s) 1354, 1766, 2879
BstV2I GAAGAC 2 cut(s) 716, 3444
BstX2I RGATCY 3 cut(s) 969, 1023, 2373
BstXI CCANNNNNNTGG 3 cut(s) 181, 1399, 2542
BstYI RGATCY 3 cut(s) 969, 1023, 2373
BsuI GTATCC 1 cut(s) 3611
BsuRI GGCC 7 cut(s) 233, 2866, 2875, 3041, 3063, 3111, 3814
BtgI CCRYGG 3 cut(s) 2525, 3106, 3373
BtgZI GCGATG 2 cut(s) 393, 2615
BtsI GCAGTG 2 cut(s) 1151, 3857
BtsIMutI CAGTG 9 cut(s) 1010, 1151, 1834, 2089, 2787, 3165, 3256, 3857, 3910
BveI ACCTGC 1 cut(s) 168
Cac8I GCNNGC 6 cut(s) 955, 1240, 1329, 2661, 2665, 3256
CaiI CAGNNNCTG 2 cut(s) 1779, 1921
CfoI GCGC 2 cut(s) 1751, 3773
Cfr13I GGNCC 6 cut(s) 34, 1262, 2532, 2865, 2874, 3039
Cfr42I CCGCGG 1 cut(s) 3109
CseI GACGC 2 cut(s) 2093, 2644
Csp6I GTAC 8 cut(s) 105, 493, 649, 1702, 1809, 1829, 2647, 2849
CviQI GTAC 8 cut(s) 105, 493, 649, 1702, 1809, 1829, 2647, 2849
DdeI CTNAG 7 cut(s) 1013, 1427, 2274, 2809, 3134, 3513, 3846
DraI TTTAAA 2 cut(s) 423, 3719
EaeI YGGCCR 2 cut(s) 3109, 3812
Eam1104I CTCTTC 2 cut(s) 143, 1025
EarI CTCTTC 2 cut(s) 143, 1025
Eco105I TACGTA 1 cut(s) 1812
Eco130I CCWWGG 5 cut(s) 206, 2525, 2705, 3042, 3504
Eco47I GGWCC 3 cut(s) 34, 1262, 2532
Eco57I CTGAAG 7 cut(s) 124, 152, 1111, 1222, 1756, 1898, 2728
EcoRI GAATTC 2 cut(s) 1869, 2546
EcoRII CCWGG 7 cut(s) 36, 603, 1920, 2151, 2593, 2820, 3814
EcoT14I CCWWGG 5 cut(s) 206, 2525, 2705, 3042, 3504
EcoT22I ATGCAT 3 cut(s) 551, 2369, 3710
ErhI CCWWGG 5 cut(s) 206, 2525, 2705, 3042, 3504
FaqI GGGAC 3 cut(s) 1275, 1912, 3433
FbaI TGATCA 3 cut(s) 2079, 2604, 3155
FblI GTMKAC 3 cut(s) 997, 2553, 3873
Fnu4HI GCNGC 8 cut(s) 915, 1368, 1780, 2258, 2406, 2639, 2893, 3109
Fsp4HI GCNGC 8 cut(s) 915, 1368, 1780, 2258, 2406, 2639, 2893, 3109
GlaI GCGC 2 cut(s) 1750, 3772
GluI GCNGC 8 cut(s) 915, 1368, 1780, 2258, 2406, 2639, 2893, 3109
GsuI CTGGAG 8 cut(s) 181, 626, 986, 1264, 1474, 1789, 1943, 2174
HaeIII GGCC 7 cut(s) 233, 2866, 2875, 3041, 3063, 3111, 3814
HapII CCGG 4 cut(s) 794, 880, 2311, 3031
HgaI GACGC 2 cut(s) 2093, 2644
HhaI GCGC 2 cut(s) 1751, 3773
Hin1I GRCGYC 1 cut(s) 2636
Hin6I GCGC 2 cut(s) 1749, 3771
HinP1I GCGC 2 cut(s) 1749, 3771
HincII GTYRAC 1 cut(s) 998
HindII GTYRAC 1 cut(s) 998
HindIII AAGCTT 2 cut(s) 1236, 1789
HpaII CCGG 4 cut(s) 794, 880, 2311, 3031
HphI GGTGA 3 cut(s) 123, 974, 2505
Hpy166II GTNNAC 8 cut(s) 105, 723, 786, 982, 998, 2554, 3131, 3874
Hpy8I GTNNAC 8 cut(s) 105, 723, 786, 982, 998, 2554, 3131, 3874
Hpy99I CGWCG 1 cut(s) 672
HpyCH4III ACNGT 6 cut(s) 478, 847, 1523, 1893, 2490, 2782
HpyCH4IV ACGT 6 cut(s) 397, 612, 1811, 2794, 3056, 3674
HpyF10VI GCNNNNNNNGC 6 cut(s) 1776, 1788, 2263, 2872, 2941, 3060
HpyF3I CTNAG 7 cut(s) 1013, 1427, 2274, 2809, 3134, 3513, 3846
HpySE526I ACGT 6 cut(s) 397, 612, 1811, 2794, 3056, 3674
Hsp92I GRCGYC 1 cut(s) 2636
HspAI GCGC 2 cut(s) 1749, 3771
Kpn2I TCCGGA 1 cut(s) 793
Ksp22I TGATCA 3 cut(s) 2079, 2604, 3155
KspI CCGCGG 1 cut(s) 3109
LguI GCTCTTC 1 cut(s) 143
LmnI GCTCC 3 cut(s) 950, 1245, 1633
Lsp1109I GCAGC 3 cut(s) 1354, 1766, 2879
LweI GCATC 8 cut(s) 117, 536, 1356, 2376, 2559, 2953, 3695, 3742
MaeII ACGT 6 cut(s) 397, 612, 1811, 2794, 3056, 3674
MaeIII GTNAC 8 cut(s) 466, 519, 821, 1583, 1887, 2040, 2855, 3000
MfeI CAATTG 4 cut(s) 728, 1289, 1466, 2885
MflI RGATCY 3 cut(s) 969, 1023, 2373
MhlI GDGCHC 3 cut(s) 3056, 3336, 3867
MlsI TGGCCA 1 cut(s) 3814
MluNI TGGCCA 1 cut(s) 3814
MlyI GAGTC 7 cut(s) 993, 1135, 1282, 1888, 1934, 2137, 3661
MmeI TCCRAC 2 cut(s) 553, 727
Mox20I TGGCCA 1 cut(s) 3814
Mph1103I ATGCAT 3 cut(s) 551, 2369, 3710
MroI TCCGGA 1 cut(s) 793
MroXI GAANNNNTTC 5 cut(s) 137, 160, 1166, 3484, 3541
MscI TGGCCA 1 cut(s) 3814
MslI CAYNNNNRTG 3 cut(s) 1256, 2725, 3860
Msp20I TGGCCA 1 cut(s) 3814
MspA1I CMGCKG 1 cut(s) 3108
MspCI CTTAAG 2 cut(s) 1608, 1668
MspI CCGG 4 cut(s) 794, 880, 2311, 3031
MspR9I CCNGG 7 cut(s) 38, 605, 1922, 2153, 2595, 2822, 3816
MunI CAATTG 4 cut(s) 728, 1289, 1466, 2885
Mva1269I GAATGC 1 cut(s) 1139
MvaI CCWGG 7 cut(s) 38, 605, 1922, 2153, 2595, 2822, 3816
MvnI CGCG 4 cut(s) 412, 2260, 3108, 3771
MwoI GCNNNNNNNGC 6 cut(s) 1776, 1788, 2263, 2872, 2941, 3060
NcoI CCATGG 1 cut(s) 2525
NlaIV GGNNCC 6 cut(s) 261, 1019, 1263, 2375, 3199, 3333
NmuCI GTSAC 4 cut(s) 466, 1887, 2040, 2855
NsiI ATGCAT 3 cut(s) 551, 2369, 3710
NspI RCATGY 4 cut(s) 906, 957, 2048, 3258
NspV TTCGAA 2 cut(s) 2455, 2798
OliI CACNNNNGTG 1 cut(s) 2725
PaeI GCATGC 2 cut(s) 957, 3258
PasI CCCWGGG 1 cut(s) 2821
PciI ACATGT 1 cut(s) 2044
PciSI GCTCTTC 1 cut(s) 143
PctI GAATGC 1 cut(s) 1139
PdmI GAANNNNTTC 5 cut(s) 137, 160, 1166, 3484, 3541
PflFI GACNNNGTC 1 cut(s) 478
PflMI CCANNNNNTGG 1 cut(s) 1081
PfoI TCCNGGA 2 cut(s) 603, 2151
PkrI GCNGC 8 cut(s) 916, 1369, 1781, 2259, 2407, 2640, 2894, 3110
PleI GAGTC 7 cut(s) 993, 1134, 1281, 1887, 1933, 2136, 3661
PpsI GAGTC 7 cut(s) 993, 1134, 1281, 1887, 1933, 2136, 3661
Ppu21I YACGTR 1 cut(s) 1812
PscI ACATGT 1 cut(s) 2044
PshAI GACNNNNGTC 2 cut(s) 1894, 3434
Psp1406I AACGTT 2 cut(s) 397, 2794
Psp6I CCWGG 7 cut(s) 36, 603, 1920, 2151, 2593, 2820, 3814
PspGI CCWGG 7 cut(s) 36, 603, 1920, 2151, 2593, 2820, 3814
PspN4I GGNNCC 6 cut(s) 261, 1019, 1263, 2375, 3199, 3333
PspPI GGNCC 6 cut(s) 34, 1262, 2532, 2865, 2874, 3039
PsrI GAACNNNNNNTAC 4 cut(s) 2403, 2435, 2436, 2468
PstNI CAGNNNCTG 2 cut(s) 1779, 1921
PsuI RGATCY 3 cut(s) 969, 1023, 2373
PsyI GACNNNGTC 1 cut(s) 478
RsaI GTAC 8 cut(s) 106, 494, 650, 1703, 1810, 1830, 2648, 2850
RsaNI GTAC 8 cut(s) 105, 493, 649, 1702, 1809, 1829, 2647, 2849
RseI CAYNNNNRTG 3 cut(s) 1256, 2725, 3860
SacII CCGCGG 1 cut(s) 3109
SalI GTCGAC 1 cut(s) 996
SapI GCTCTTC 1 cut(s) 143
SatI GCNGC 8 cut(s) 915, 1368, 1780, 2258, 2406, 2639, 2893, 3109
Sau96I GGNCC 6 cut(s) 34, 1262, 2532, 2865, 2874, 3039
SchI GAGTC 7 cut(s) 993, 1135, 1282, 1888, 1934, 2137, 3661
ScrFI CCNGG 7 cut(s) 38, 605, 1922, 2153, 2595, 2822, 3816
SduI GDGCHC 3 cut(s) 3056, 3336, 3867
SfaNI GCATC 8 cut(s) 117, 536, 1356, 2376, 2559, 2953, 3695, 3742
SfcI CTRYAG 3 cut(s) 1519, 1976, 2409
SfiI GGCCNNNNNGGCC 1 cut(s) 2872
Sfr303I CCGCGG 1 cut(s) 3109
SfuI TTCGAA 2 cut(s) 2455, 2798
SgrBI CCGCGG 1 cut(s) 3109
SinI GGWCC 3 cut(s) 34, 1262, 2532
SmiMI CAYNNNNRTG 3 cut(s) 1256, 2725, 3860
SmlI CTYRAG 5 cut(s) 769, 1608, 1668, 2767, 3049
SmoI CTYRAG 5 cut(s) 769, 1608, 1668, 2767, 3049
SnaBI TACGTA 1 cut(s) 1812
SphI GCATGC 2 cut(s) 957, 3258
SsiI CCGC 8 cut(s) 915, 2258, 2405, 2639, 2650, 3106, 3108, 3769
StyD4I CCNGG 7 cut(s) 36, 603, 1920, 2151, 2593, 2820, 3814
StyI CCWWGG 5 cut(s) 206, 2525, 2705, 3042, 3504
TaaI ACNGT 6 cut(s) 478, 847, 1523, 1893, 2490, 2782
TaiI ACGT 6 cut(s) 400, 615, 1814, 2797, 3059, 3677
TaqI TCGA 8 cut(s) 482, 997, 2212, 2231, 2455, 2798, 3455, 3726
TatI WGTACW 4 cut(s) 104, 492, 648, 1828
TauI GCSGC 5 cut(s) 917, 2260, 2408, 2641, 3111
TscAI CASTG 9 cut(s) 1017, 1158, 1841, 2096, 2787, 3165, 3256, 3857, 3917
TseFI GTSAC 4 cut(s) 466, 1887, 2040, 2855
TseI GCWGC 3 cut(s) 1367, 1779, 2892
Tsp45I GTSAC 4 cut(s) 466, 1887, 2040, 2855
TspGWI ACGGA 2 cut(s) 1784, 1855
TspRI CASTG 9 cut(s) 1017, 1158, 1841, 2096, 2787, 3165, 3256, 3857, 3917
Tth111I GACNNNGTC 1 cut(s) 478
Van91I CCANNNNNTGG 1 cut(s) 1081
Vha464I CTTAAG 2 cut(s) 1608, 1668
VpaK11BI GGWCC 3 cut(s) 34, 1262, 2532
XapI RAATTY 9 cut(s) 190, 211, 1590, 1869, 2162, 2546, 2692, 2800, 3267
XbaI TCTAGA 1 cut(s) 61
XceI RCATGY 4 cut(s) 906, 957, 2048, 3258
XcmI CCANNNNNNNNNTGG 1 cut(s) 2523
XmaJI CCTAGG 1 cut(s) 3042
XmiI GTMKAC 3 cut(s) 997, 2553, 3873
XmnI GAANNNNTTC 5 cut(s) 137, 160, 1166, 3484, 3541
Zsp2I ATGCAT 3 cut(s) 551, 2369, 3710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.