Rorug07G0338100

resistance protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
37135025 .. 37135555
531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0338100.1

Sequence Viewer

Length: 531 bp
ATGGGACCATGGATGCTGATGAATTACAGTAATAAAAAGAAGACCATTGATGGTGGGGGAGCAAAGAAAAATACAAATAAGGGTTCAAGGTTTACTGTTTTGCAGGATGAGGATGCTATGCCTTCTACTGAACCTAAGACCATTACTGAGAATACCACTAAGCCATCAACTCCTCCAATTGTGAAACTGTGGACTAGTTTCCAAGATAAGAAAAAGAATTTCACCAAGCCAAGTTCTGCTAAGGCGGGATTCAATTCAGCAACTAATGATTCCAGTACTGGTGCCTCTACTTCAGGGTACATCAAAACTATGTCAAGGTTTCCAATGAAAGATGTGTCCAATAATGTTGATAATAGCAATGGTTCAAAGGCTGCAATGCAATACCAAAGGAAAACCAAAGGTACTATCTCTTCTGCTACTAAACACCAGCCTCACATCTTCAAAAATCTCTCTTTTGAAAATGTTGATGCTAATGTGCTTGGTAATGCTATTTCTGCTATCTTTGGTCATTGTCCTCCGGATAGAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

176

Amino Acids

19.17

Weight (kDa)

9.86

Isoelectric Point (pI)

31.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 281
AccIII TCCGGA 1 cut(s) 517
AciI CCGC 1 cut(s) 245
AcsI RAATTY 1 cut(s) 217
AcuI CTGAAG 1 cut(s) 276
AfaI GTAC 3 cut(s) 277, 299, 403
AgsI TTSAA 5 cut(s) 87, 253, 366, 442, 458
AhlI ACTAGT 1 cut(s) 194
Aor13HI TCCGGA 1 cut(s) 517
ApeKI GCWGC 1 cut(s) 371
ApoI RAATTY 1 cut(s) 217
AspS9I GGNCC 1 cut(s) 5
AsuHPI GGTGA 1 cut(s) 214
AvaII GGWCC 1 cut(s) 5
BanI GGYRCC 1 cut(s) 281
BarI GAAGNNNNNNTAC 2 cut(s) 394, 426
BbsI GAAGAC 1 cut(s) 47
BbvI GCAGC 1 cut(s) 358
BccI CCATC 2 cut(s) 44, 172
BcuI ACTAGT 1 cut(s) 194
BfaI CTAG 1 cut(s) 195
BisI GCNGC 1 cut(s) 372
BlsI GCNGC 1 cut(s) 373
BmcAI AGTACT 1 cut(s) 277
Bme18I GGWCC 1 cut(s) 5
BmgT120I GGNCC 1 cut(s) 5
BmiI GGNNCC 2 cut(s) 6, 283
BmsI GCATC 3 cut(s) 3, 103, 457
BpiI GAAGAC 1 cut(s) 47
Bpu10I CCTNAGC 1 cut(s) 240
BsaJI CCNNGG 1 cut(s) 8
BsaWI WCCGGW 1 cut(s) 517
Bse1I ACTGG 2 cut(s) 273, 283
Bse3DI GCAATG 2 cut(s) 364, 381
BseAI TCCGGA 1 cut(s) 517
BseDI CCNNGG 1 cut(s) 8
BseGI GGATG 3 cut(s) 18, 112, 118
BseMI GCAATG 2 cut(s) 364, 381
BseMII CTCAG 1 cut(s) 138
BseNI ACTGG 2 cut(s) 273, 283
BseRI GAGGAG 1 cut(s) 162
BseXI GCAGC 1 cut(s) 358
BshNI GGYRCC 1 cut(s) 281
BsiSI CCGG 1 cut(s) 518
BslFI GGGAC 1 cut(s) 18
BsmFI GGGAC 1 cut(s) 18
Bsp13I TCCGGA 1 cut(s) 517
Bsp19I CCATGG 1 cut(s) 8
BspACI CCGC 1 cut(s) 245
BspCNI CTCAG 1 cut(s) 139
BspEI TCCGGA 1 cut(s) 517
BspLI GGNNCC 2 cut(s) 6, 283
BspT107I GGYRCC 1 cut(s) 281
BsrDI GCAATG 2 cut(s) 364, 381
BsrI ACTGG 2 cut(s) 273, 283
BssECI CCNNGG 1 cut(s) 8
BssT1I CCWWGG 1 cut(s) 8
Bst4CI ACNGT 3 cut(s) 29, 97, 189
Bst6I CTCTTC 1 cut(s) 415
BstDEI CTNAG 4 cut(s) 135, 147, 159, 240
BstDSI CCRYGG 1 cut(s) 8
BstF5I GGATG 3 cut(s) 18, 112, 118
BstMWI GCNNNNNNNGC 1 cut(s) 494
BstV1I GCAGC 1 cut(s) 358
BstV2I GAAGAC 1 cut(s) 47
BtgI CCRYGG 1 cut(s) 8
BtsCI GGATG 3 cut(s) 18, 112, 118
Cfr13I GGNCC 1 cut(s) 5
Csp6I GTAC 3 cut(s) 276, 298, 402
CviAII CATG 1 cut(s) 9
CviJI RGCY 4 cut(s) 163, 229, 371, 430
CviKI_1 RGCY 4 cut(s) 163, 229, 371, 430
CviQI GTAC 3 cut(s) 276, 298, 402
DdeI CTNAG 4 cut(s) 135, 147, 159, 240
Eam1104I CTCTTC 1 cut(s) 415
EarI CTCTTC 1 cut(s) 415
Eco130I CCWWGG 1 cut(s) 8
Eco47I GGWCC 1 cut(s) 5
Eco57I CTGAAG 1 cut(s) 276
EcoT14I CCWWGG 1 cut(s) 8
ErhI CCWWGG 1 cut(s) 8
FaeI CATG 1 cut(s) 12
FaiI YATR 3 cut(s) 10, 119, 311
FaqI GGGAC 1 cut(s) 18
FatI CATG 1 cut(s) 8
FauI CCCGC 1 cut(s) 238
Fnu4HI GCNGC 1 cut(s) 372
FokI GGATG 3 cut(s) 25, 119, 125
Fsp4HI GCNGC 1 cut(s) 372
FspBI CTAG 1 cut(s) 195
GluI GCNGC 1 cut(s) 372
HapII CCGG 1 cut(s) 518
Hin1II CATG 1 cut(s) 12
HinfI GANTC 2 cut(s) 249, 269
HpaII CCGG 1 cut(s) 518
HphI GGTGA 1 cut(s) 214
Hpy166II GTNNAC 2 cut(s) 93, 192
Hpy188III TCNNGA 1 cut(s) 518
Hpy8I GTNNAC 2 cut(s) 93, 192
HpyAV CCTTC 1 cut(s) 132
HpyCH4III ACNGT 3 cut(s) 29, 97, 189
HpyCH4V TGCA 3 cut(s) 103, 374, 379
HpyF10VI GCNNNNNNNGC 1 cut(s) 494
HpyF3I CTNAG 4 cut(s) 135, 147, 159, 240
Hsp92II CATG 1 cut(s) 12
Kpn2I TCCGGA 1 cut(s) 517
LmnI GCTCC 1 cut(s) 59
LpnPI CCDG 5 cut(s) 89, 264, 279, 286, 440
Lsp1109I GCAGC 1 cut(s) 358
LweI GCATC 3 cut(s) 3, 103, 457
MaeI CTAG 1 cut(s) 195
MboII GAAGA 3 cut(s) 52, 402, 430
MfeI CAATTG 1 cut(s) 177
MluCI AATT 4 cut(s) 22, 177, 217, 253
MnlI CCTC 5 cut(s) 103, 183, 295, 441, 525
MroI TCCGGA 1 cut(s) 517
MspI CCGG 1 cut(s) 518
MunI CAATTG 1 cut(s) 177
MwoI GCNNNNNNNGC 1 cut(s) 494
NcoI CCATGG 1 cut(s) 8
NlaIII CATG 1 cut(s) 12
NlaIV GGNNCC 2 cut(s) 6, 283
PfeI GAWTC 2 cut(s) 249, 269
PkrI GCNGC 1 cut(s) 373
PspN4I GGNNCC 2 cut(s) 6, 283
PspPI GGNCC 1 cut(s) 5
RsaI GTAC 3 cut(s) 277, 299, 403
RsaNI GTAC 3 cut(s) 276, 298, 402
SatI GCNGC 1 cut(s) 372
Sau96I GGNCC 1 cut(s) 5
ScaI AGTACT 1 cut(s) 277
SetI ASST 4 cut(s) 92, 136, 320, 403
SfaNI GCATC 3 cut(s) 3, 103, 457
SinI GGWCC 1 cut(s) 5
SpeI ACTAGT 1 cut(s) 194
Sse9I AATT 4 cut(s) 22, 177, 217, 253
SsiI CCGC 1 cut(s) 245
SspMI CTAG 1 cut(s) 195
StyI CCWWGG 1 cut(s) 8
TaaI ACNGT 3 cut(s) 29, 97, 189
TasI AATT 4 cut(s) 22, 177, 217, 253
TatI WGTACW 1 cut(s) 275
TfiI GAWTC 2 cut(s) 249, 269
TseI GCWGC 1 cut(s) 371
TspDTI ATGAA 2 cut(s) 35, 341
VpaK11BI GGWCC 1 cut(s) 5
XapI RAATTY 1 cut(s) 217
XspI CTAG 1 cut(s) 195
ZrmI AGTACT 1 cut(s) 277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.