Rmu_sc0001070.1_g000031

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001070.1
OG0000129
Physical Location & Seq
Forward (+)
138698 .. 141458
2761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001070.1_g000031.1.cds

Sequence Viewer

Length: 1956 bp
atggattctcacctgaatgaaatgctttcgtacttagacattgggtgtcctgatgttcgtatcatagggatttgtgggatgggtggtatcggtaagacaactgttgcacaagtggtttttgaaagggtacaagctcagtttgaaggttgcagctttcttgagaatgttagagaggaaacagaaaagcaaggtgcaattcatttacaagagcaacttcttttgaacttgctgaattgtaatgtaaatgtacagaacactaaaatgggaaaagatataatcaggcatagactatgtactaaaagggttcttctcattcttgatgatgtggatcaagaagaacaattggaagcattgtgtaatcgcacttggtttggtccagggagtaggatcatcctaacatcaagagatgaacaattgctcagtttatttagagtggataaagtatacaaggtgaatccattaactgcttgcgaagctcttgagctctttggtatgaaagcctttaagaaagaccagctggttgggaaagattttctcaagctatccaaggaatttttgaaatatgctaatggtcttccattagctattaaagttttgggttcctctgtttatggtaagaatgtaaaattatggtctagtgcattggatagactaaaaaacaatcctcaaaaaaagattatcaatgttcttaaagctagttatgatggattagaagaaactgaaaagaaaatatttttggacatcgcatgtttctttaagggatggaacatagctcgtgtaacaagtatactacaaggtagtggccactgcccggacattgatatagaggttctcgtacagaaatctttggtaacgctgtttggaagcgaattggggatgcatgacttggtacaagaactgggttgggatattgttcgtcaagaaagtcctgaagagcccaaaaatcgtagcaggttgtggcttgccgatgaaatcatctatgttcttggtcgaagtaagcttattgatctgagtggttcaccatacttgatgtcgactccagacttcactgaggttcctgatcttcaggagttggagcttcaatattgtacaagcttggtggaggttcacccgtctcttggatttctgaagaaacttgtctctctgaatatgacacattgcaggtctattgagagccttccacctttcactgcccttgaatccctccaaatattgaggctttcattctgttcagggctgaagaagtttccagaaattgaaggaaatatgaaaagcttgctggagcttcatttggatagaaccagcattgaggaattgccttcatcaattgaacacttgactggtcttaccatattgaatctaacagactgtaaaaaccttttgcatcttcccgataccgttgggtgcttgacttctttgaaaagtctccatctaacaggttgctccaaaattgatgagatacctgagaatctgaaaggtatgatatgtctggagaagtttacaattggtggaacttccataagggagttatctttcattgtaggcatgaagaatctacggtatctatcctgcgaaggatgtaaatgtctagtttcagaatcatgcaaaagcctggcttcgatatcgaatttgatagcgctagacttgagttattgcaatctgatggatggagcaattctcaatgattttagcagcctaatctccttggaatttttagatttaagtgcttcaattgctgcccaagaagcttccgttaagtcttcatcacgtgtatgcacaagattgtacttcactgacagattacccaaatcaaatcaaagaattgaattcatcggagtcgggactgactattatcgattccctcaattcttcagcacttggagtctcacaaagttcgtccgggttgaatttttcaagcgttgtaggggaacctctacaagcgcatgtgacatataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

651

Amino Acids

73.11

Weight (kDa)

5.99

Isoelectric Point (pI)

42.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 942, 1152
AccI GTMKAC 3 cut(s) 444, 787, 1034
AclWI GGATC 2 cut(s) 336, 395
AcoI YGGCCR 1 cut(s) 802
AcsI RAATTY 5 cut(s) 551, 1627, 1709, 1826, 1907
AcuI CTGAAG 5 cut(s) 951, 1049, 1148, 1259, 1855
AcvI CACGTG 1 cut(s) 1769
AfaI GTAC 8 cut(s) 32, 129, 249, 295, 837, 891, 1090, 1787
AfeI AGCGCT 1 cut(s) 1638
AfiI CCNNNNNNNGG 2 cut(s) 811, 1118
AflIII ACRYGT 1 cut(s) 1768
AjnI CCWGG 2 cut(s) 376, 1611
AjuI GAANNNNNNNTTGG 2 cut(s) 719, 751
Alw21I GWGCWC 1 cut(s) 486
Alw26I GTCTC 4 cut(s) 1119, 1144, 1430, 1889
AlwI GGATC 2 cut(s) 336, 395
Aor51HI AGCGCT 1 cut(s) 1638
AoxI GGCC 1 cut(s) 802
ApeKI GCWGC 3 cut(s) 150, 1692, 1736
ApoI RAATTY 5 cut(s) 551, 1627, 1709, 1826, 1907
AspLEI GCGC 2 cut(s) 1639, 1943
AspS9I GGNCC 1 cut(s) 374
AsuC2I CCSGG 2 cut(s) 812, 1901
AsuHPI GGTGA 3 cut(s) 463, 1011, 1100
AvaII GGWCC 1 cut(s) 374
BalI TGGCCA 1 cut(s) 804
BanII GRGCYC 2 cut(s) 486, 939
BauI CACGAG 1 cut(s) 774
BbrPI CACGTG 1 cut(s) 1769
BbsI GAAGAC 2 cut(s) 566, 1752
Bbv12I GWGCWC 1 cut(s) 486
BbvI GCAGC 3 cut(s) 162, 1704, 1723
BccI CCATC 6 cut(s) 73, 698, 756, 1437, 1657, 1661
BciT130I CCWGG 2 cut(s) 378, 1613
BcnI CCSGG 2 cut(s) 812, 1901
BcoDI GTCTC 4 cut(s) 1119, 1144, 1430, 1889
BfaI CTAG 4 cut(s) 636, 696, 1589, 1640
BfoI RGCGCY 1 cut(s) 1640
BfuAI ACCTGC 2 cut(s) 942, 1152
BisI GCNGC 3 cut(s) 151, 1693, 1737
BlsI GCNGC 3 cut(s) 152, 1694, 1738
Bme1390I CCNGG 4 cut(s) 378, 812, 1613, 1901
Bme18I GGWCC 1 cut(s) 374
BmgT120I GGNCC 1 cut(s) 374
BmiI GGNNCC 3 cut(s) 601, 1056, 1930
BmrFI CCNGG 4 cut(s) 378, 812, 1613, 1901
BmrI ACTGGG 1 cut(s) 908
BmsI GCATC 2 cut(s) 867, 1393
BmuI ACTGGG 1 cut(s) 908
BpiI GAAGAC 2 cut(s) 566, 1752
BplI GAGNNNNNCTC 2 cut(s) 1662, 1694
BpmI CTGGAG 3 cut(s) 1023, 1301, 1511
BpuEI CTTGAG 4 cut(s) 179, 500, 521, 1666
BpuMI CCSGG 2 cut(s) 812, 1901
Bsa29I ATCGAT 1 cut(s) 1855
BsaAI YACGTR 1 cut(s) 1769
BsaBI GATNNNNATC 1 cut(s) 327
BsaJI CCNNGG 3 cut(s) 377, 546, 1704
Bsc4I CCNNNNNNNGG 2 cut(s) 811, 1118
Bse1I ACTGG 2 cut(s) 903, 1345
Bse3DI GCAATG 1 cut(s) 1156
Bse8I GATNNNNATC 1 cut(s) 327
BseBI CCWGG 2 cut(s) 378, 1613
BseCI ATCGAT 1 cut(s) 1855
BseDI CCNNGG 3 cut(s) 377, 546, 1704
BseGI GGATG 6 cut(s) 84, 390, 767, 882, 1583, 1672
BseJI GATNNNNATC 1 cut(s) 327
BseLI CCNNNNNNNGG 2 cut(s) 811, 1118
BseMI GCAATG 1 cut(s) 1156
BseMII CTCAG 5 cut(s) 149, 433, 1001, 1041, 1455
BseNI ACTGG 2 cut(s) 903, 1345
BseXI GCAGC 3 cut(s) 162, 1704, 1723
BshFI GGCC 1 cut(s) 804
BshVI ATCGAT 1 cut(s) 1855
BsiHKAI GWGCWC 1 cut(s) 486
BsiSI CCGG 2 cut(s) 812, 1900
BslFI GGGAC 1 cut(s) 1855
BslI CCNNNNNNNGG 2 cut(s) 811, 1118
BsmAI GTCTC 4 cut(s) 1119, 1144, 1430, 1889
BsmBI CGTCTC 1 cut(s) 1119
BsmFI GGGAC 1 cut(s) 1855
BsnI GGCC 1 cut(s) 804
Bsp1286I GDGCHC 2 cut(s) 486, 939
Bsp1407I TGTACA 2 cut(s) 247, 1088
Bsp143I GATC 4 cut(s) 328, 387, 1006, 1060
BspANI GGCC 1 cut(s) 804
BspCNI CTCAG 5 cut(s) 148, 432, 1002, 1042, 1456
BspDI ATCGAT 1 cut(s) 1855
BspLI GGNNCC 3 cut(s) 601, 1056, 1930
BspMI ACCTGC 2 cut(s) 942, 1152
BspPI GGATC 2 cut(s) 336, 395
BspQI GCTCTTC 1 cut(s) 927
BsrDI GCAATG 1 cut(s) 1156
BsrGI TGTACA 2 cut(s) 247, 1088
BsrI ACTGG 2 cut(s) 903, 1345
BssECI CCNNGG 3 cut(s) 377, 546, 1704
BssMI GATC 4 cut(s) 328, 387, 1006, 1060
BssNAI GTATAC 2 cut(s) 445, 788
BssSI CACGAG 1 cut(s) 774
BssT1I CCWWGG 2 cut(s) 546, 1704
Bst1107I GTATAC 2 cut(s) 445, 788
Bst2BI CACGAG 1 cut(s) 774
Bst2UI CCWGG 2 cut(s) 378, 1613
Bst4CI ACNGT 4 cut(s) 103, 1370, 1399, 1560
Bst6I CTCTTC 1 cut(s) 927
BstAUI TGTACA 2 cut(s) 247, 1088
BstBAI YACGTR 1 cut(s) 1769
BstC8I GCNNGC 3 cut(s) 469, 963, 1277
BstDEI CTNAG 6 cut(s) 34, 135, 419, 1010, 1050, 1464
BstF5I GGATG 6 cut(s) 84, 390, 767, 882, 1583, 1672
BstH2I RGCGCY 1 cut(s) 1640
BstHHI GCGC 2 cut(s) 1639, 1943
BstKTI GATC 4 cut(s) 331, 390, 1009, 1063
BstMAI GTCTC 4 cut(s) 1119, 1144, 1430, 1889
BstMBI GATC 4 cut(s) 328, 387, 1006, 1060
BstMWI GCNNNNNNNGC 3 cut(s) 473, 1733, 1745
BstNI CCWGG 2 cut(s) 378, 1613
BstNSI RCATGY 2 cut(s) 750, 1947
BstSCI CCNGG 4 cut(s) 376, 810, 1611, 1899
BstV1I GCAGC 3 cut(s) 162, 1704, 1723
BstV2I GAAGAC 2 cut(s) 566, 1752
BstXI CCANNNNNNTGG 1 cut(s) 521
BstZ17I GTATAC 2 cut(s) 445, 788
Bsu15I ATCGAT 1 cut(s) 1855
BsuRI GGCC 1 cut(s) 804
BsuTUI ATCGAT 1 cut(s) 1855
BtgZI GCGATG 1 cut(s) 727
BtsCI GGATG 6 cut(s) 84, 390, 767, 882, 1583, 1672
BtsI GCAGTG 2 cut(s) 805, 1188
BtsIMutI CAGTG 4 cut(s) 805, 1047, 1188, 1791
BveI ACCTGC 2 cut(s) 942, 1152
Cac8I GCNNGC 3 cut(s) 469, 963, 1277
CfoI GCGC 2 cut(s) 1639, 1943
Cfr13I GGNCC 1 cut(s) 374
ClaI ATCGAT 1 cut(s) 1855
Csp6I GTAC 8 cut(s) 31, 128, 248, 294, 836, 890, 1089, 1786
CspCI CAANNNNNGTGG 2 cut(s) 1080, 1115
CviAII CATG 5 cut(s) 747, 881, 1546, 1602, 1944
CviQI GTAC 8 cut(s) 31, 128, 248, 294, 836, 890, 1089, 1786
DdeI CTNAG 6 cut(s) 34, 135, 419, 1010, 1050, 1464
DpnI GATC 4 cut(s) 330, 389, 1008, 1062
DpnII GATC 4 cut(s) 328, 387, 1006, 1060
EaeI YGGCCR 1 cut(s) 802
Eam1104I CTCTTC 1 cut(s) 927
EarI CTCTTC 1 cut(s) 927
Ecl136II GAGCTC 1 cut(s) 484
Eco130I CCWWGG 2 cut(s) 546, 1704
Eco24I GRGCYC 2 cut(s) 486, 939
Eco32I GATATC 1 cut(s) 1623
Eco47I GGWCC 1 cut(s) 374
Eco47III AGCGCT 1 cut(s) 1638
Eco53kI GAGCTC 1 cut(s) 484
Eco57I CTGAAG 5 cut(s) 951, 1049, 1148, 1259, 1855
Eco72I CACGTG 1 cut(s) 1769
EcoICRI GAGCTC 1 cut(s) 484
EcoRI GAATTC 1 cut(s) 1826
EcoRII CCWGG 2 cut(s) 376, 1611
EcoRV GATATC 1 cut(s) 1623
EcoT14I CCWWGG 2 cut(s) 546, 1704
EcoT22I ATGCAT 1 cut(s) 882
EcoT38I GRGCYC 2 cut(s) 486, 939
ErhI CCWWGG 2 cut(s) 546, 1704
Esp3I CGTCTC 1 cut(s) 1119
FaeI CATG 5 cut(s) 750, 884, 1549, 1605, 1947
FalI AAGNNNNNCTT 4 cut(s) 198, 230, 1600, 1632
FaqI GGGAC 1 cut(s) 1855
FatI CATG 5 cut(s) 746, 880, 1545, 1601, 1943
FblI GTMKAC 3 cut(s) 444, 787, 1034
Fnu4HI GCNGC 3 cut(s) 151, 1693, 1737
FokI GGATG 6 cut(s) 91, 377, 774, 889, 1590, 1679
FriOI GRGCYC 2 cut(s) 486, 939
Fsp4HI GCNGC 3 cut(s) 151, 1693, 1737
FspBI CTAG 4 cut(s) 636, 696, 1589, 1640
GlaI GCGC 2 cut(s) 1638, 1942
GluI GCNGC 3 cut(s) 151, 1693, 1737
GsuI CTGGAG 3 cut(s) 1023, 1301, 1511
HaeII RGCGCY 1 cut(s) 1640
HaeIII GGCC 1 cut(s) 804
HapII CCGG 2 cut(s) 812, 1900
HhaI GCGC 2 cut(s) 1639, 1943
Hin1II CATG 5 cut(s) 750, 884, 1549, 1605, 1947
Hin6I GCGC 2 cut(s) 1637, 1941
HinP1I GCGC 2 cut(s) 1637, 1941
HincII GTYRAC 1 cut(s) 1035
HindII GTYRAC 1 cut(s) 1035
HindIII AAGCTT 4 cut(s) 998, 1093, 1273, 1746
HpaII CCGG 2 cut(s) 812, 1900
HphI GGTGA 3 cut(s) 463, 1011, 1100
Hpy166II GTNNAC 6 cut(s) 445, 788, 1019, 1035, 1108, 1500
Hpy188I TCNGA 7 cut(s) 1011, 1128, 1146, 1473, 1597, 1662, 1835
Hpy8I GTNNAC 6 cut(s) 445, 788, 1019, 1035, 1108, 1500
HpyAV CCTTC 5 cut(s) 137, 1187, 1253, 1329, 1568
HpyCH4III ACNGT 4 cut(s) 103, 1370, 1399, 1560
HpyCH4IV ACGT 1 cut(s) 1768
HpyF10VI GCNNNNNNNGC 3 cut(s) 473, 1733, 1745
HpyF3I CTNAG 6 cut(s) 34, 135, 419, 1010, 1050, 1464
HpySE526I ACGT 1 cut(s) 1768
Hsp92II CATG 5 cut(s) 750, 884, 1549, 1605, 1947
HspAI GCGC 2 cut(s) 1637, 1941
Kzo9I GATC 4 cut(s) 328, 387, 1006, 1060
LguI GCTCTTC 1 cut(s) 927
LmnI GCTCC 4 cut(s) 1075, 1282, 1448, 1670
Lsp1109I GCAGC 3 cut(s) 162, 1704, 1723
LweI GCATC 2 cut(s) 867, 1393
MaeI CTAG 4 cut(s) 636, 696, 1589, 1640
MaeII ACGT 1 cut(s) 1768
MaeIII GTNAC 3 cut(s) 778, 850, 1946
MalI GATC 4 cut(s) 330, 389, 1008, 1062
MboI GATC 4 cut(s) 328, 387, 1006, 1060
MfeI CAATTG 5 cut(s) 341, 413, 1326, 1503, 1731
MhlI GDGCHC 2 cut(s) 486, 939
MlsI TGGCCA 1 cut(s) 804
MluNI TGGCCA 1 cut(s) 804
MlyI GAGTC 3 cut(s) 1030, 1845, 1891
MmeI TCCRAC 1 cut(s) 1053
Mox20I TGGCCA 1 cut(s) 804
Mph1103I ATGCAT 1 cut(s) 882
MscI TGGCCA 1 cut(s) 804
MseI TTAA 7 cut(s) 461, 504, 588, 690, 756, 1721, 1755
MslI CAYNNNNRTG 3 cut(s) 15, 260, 1771
Msp20I TGGCCA 1 cut(s) 804
MspA1I CMGCKG 1 cut(s) 517
MspI CCGG 2 cut(s) 812, 1900
MspR9I CCNGG 4 cut(s) 378, 812, 1613, 1901
MunI CAATTG 5 cut(s) 341, 413, 1326, 1503, 1731
MvaI CCWGG 2 cut(s) 378, 1613
MwoI GCNNNNNNNGC 3 cut(s) 473, 1733, 1745
NciI CCSGG 2 cut(s) 812, 1901
NdeII GATC 4 cut(s) 328, 387, 1006, 1060
NlaIII CATG 5 cut(s) 750, 884, 1549, 1605, 1947
NlaIV GGNNCC 3 cut(s) 601, 1056, 1930
NmuCI GTSAC 1 cut(s) 1946
NsiI ATGCAT 1 cut(s) 882
NspI RCATGY 2 cut(s) 750, 1947
PciSI GCTCTTC 1 cut(s) 927
PfeI GAWTC 8 cut(s) 5, 454, 1199, 1357, 1468, 1552, 1598, 1857
PkrI GCNGC 3 cut(s) 152, 1694, 1738
PleI GAGTC 3 cut(s) 1030, 1844, 1890
PmaCI CACGTG 1 cut(s) 1769
PmlI CACGTG 1 cut(s) 1769
PpsI GAGTC 3 cut(s) 1030, 1844, 1890
Ppu21I YACGTR 1 cut(s) 1769
Psp124BI GAGCTC 1 cut(s) 486
Psp6I CCWGG 2 cut(s) 376, 1611
PspCI CACGTG 1 cut(s) 1769
PspGI CCWGG 2 cut(s) 376, 1611
PspN4I GGNNCC 3 cut(s) 601, 1056, 1930
PspPI GGNCC 1 cut(s) 374
PvuII CAGCTG 1 cut(s) 517
RsaI GTAC 8 cut(s) 32, 129, 249, 295, 837, 891, 1090, 1787
RsaNI GTAC 8 cut(s) 31, 128, 248, 294, 836, 890, 1089, 1786
RseI CAYNNNNRTG 3 cut(s) 15, 260, 1771
SacI GAGCTC 1 cut(s) 486
SalI GTCGAC 1 cut(s) 1033
SapI GCTCTTC 1 cut(s) 927
SaqAI TTAA 7 cut(s) 461, 504, 588, 690, 756, 1721, 1755
SatI GCNGC 3 cut(s) 151, 1693, 1737
Sau3AI GATC 4 cut(s) 328, 387, 1006, 1060
Sau96I GGNCC 1 cut(s) 374
SchI GAGTC 3 cut(s) 1030, 1845, 1891
ScrFI CCNGG 4 cut(s) 378, 812, 1613, 1901
SduI GDGCHC 2 cut(s) 486, 939
SfaNI GCATC 2 cut(s) 867, 1393
SinI GGWCC 1 cut(s) 374
SmiMI CAYNNNNRTG 3 cut(s) 15, 260, 1771
SmlI CTYRAG 4 cut(s) 158, 479, 536, 1645
SmoI CTYRAG 4 cut(s) 158, 479, 536, 1645
SspI AATATT 3 cut(s) 732, 1085, 1212
SspMI CTAG 4 cut(s) 636, 696, 1589, 1640
SstI GAGCTC 1 cut(s) 486
StyD4I CCNGG 4 cut(s) 376, 810, 1611, 1899
StyI CCWWGG 2 cut(s) 546, 1704
TaaI ACNGT 4 cut(s) 103, 1370, 1399, 1560
TaiI ACGT 1 cut(s) 1771
TaqI TCGA 5 cut(s) 991, 1034, 1619, 1625, 1855
TatI WGTACW 4 cut(s) 247, 293, 1088, 1785
TfiI GAWTC 8 cut(s) 5, 454, 1199, 1357, 1468, 1552, 1598, 1857
Tru1I TTAA 7 cut(s) 461, 504, 588, 690, 756, 1721, 1755
Tru9I TTAA 7 cut(s) 461, 504, 588, 690, 756, 1721, 1755
TscAI CASTG 4 cut(s) 812, 1054, 1195, 1798
TseFI GTSAC 1 cut(s) 1946
TseI GCWGC 3 cut(s) 150, 1692, 1736
Tsp45I GTSAC 1 cut(s) 1946
TspGWI ACGGA 1 cut(s) 1741
TspRI CASTG 4 cut(s) 812, 1054, 1195, 1798
VpaK11BI GGWCC 1 cut(s) 374
XapI RAATTY 5 cut(s) 551, 1627, 1709, 1826, 1907
XceI RCATGY 2 cut(s) 750, 1947
XmiI GTMKAC 3 cut(s) 444, 787, 1034
XspI CTAG 4 cut(s) 636, 696, 1589, 1640
Zsp2I ATGCAT 1 cut(s) 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.