Rh7AG492800

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000129
Physical Location & Seq
Forward (+)
69341248 .. 69344031
2784 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG492800.1

Sequence Viewer

Length: 2505 bp
ATGCTACGGCTTATAGATCTGACTGGTTCACTATTCTTGATGTCGACCCCAGACTTCACGGAGGTTCCTGATCTTGAAGAGTTAGTGCTTAAAAATTGCTGGAGATTGGTGGAGATTCACCCGTCTCTTGGATTTCTGAAGAAACTTGTTAATTTGGATATGACATCCTGCAGCTCCATTGAGAGCATTCCACCTTTCATTACCTTGGAATCCCTTCAAATATTGAGGCTTTCAGGCTGCTCAGGATTGAAGAAGTTACCAGAAATTGAAGGAAATATGGAAAGCTTGCTGGAGCTTCATTTGGATGGGACCATCATAGAGGAATTGCCCCCATCAATTGAACGCTTGACTGGTCTAACAATGTTGAATCTAACAGGTTGTACAAACCTTTTGCATCTTCCCAATACCATTCTGTGCTTGACATCTTTGAAAAGTCTCGATCTACATGCTTGCTCCGAAATTGATGAGATTCCTGAGAATCTGAATGGTATGAAATGTTTGGAGAGGCTTTGCATTGGTCGAACTTCCATAAGGGAGTTATCTTTCATTGTAGGCATGAAGAATCTACAGTATCTATACTGCCGAGGATGTAAATGTCTAGTTTCAGAATCATACAAAGCTCTGGCTTCGTTATCGAATTTGATAGAGCTAGACTTGAGTGATTGCAATCTGATGGATGGAGCAATTCTCAATAATTTAAGCAGCCTAATCTCCCTAAGATGGTTATATTTAAGTGGTAATGGCTTTGTACTCTTACCTGAAAGCATCTATCAACTCCCAAAGCTCGAGATTCTGGACTTGACTTACTGCAGACAGCTTCAATTGCTGCCCAAGAAGGATTACCCAAATCCAATCAAATTATTGAATCCAGTGGAGTCAGAACTGATGTTCTATGTATCTCGTTTGGGGGTTCCAGAGGGGTCAGATAAATCAACTCTGGTGAGGGCGATGCTTTCGATGGTTGAAAACACCAATGCATCCTCGGTGGCGGAAGCTATGTTTGATCCCACCAATCCATCCACGCTGGTGAGAGCTATTTTTGAAAAAATCAATCCACCCACGCCCACGCTGGTTCAGAAATCTGGAATTCGTCAAGTCTATGAGCAAGATGCCTCGGTCAACGGCACCCTACCGATTGTTTGTCTGAATAAAGATCAGGAAGCCGCCTCTGTATCGGAGTCTGACTGGATTAGTCTATCTTTGAAACGGGAGAAATTCATTCCACCCTTGGAAGAAGAATCCACGCTTGTGTTGAGAAAGAACCTTGAATCTGTTCTTCCAAGATATCTTGAGGCACTGAACAGTGACTCTAAAATGTTTAAATTTAACCTCAGAGGAAGCCCAGGGTGGTTTGGGGTCTCTAAAACAATCCAGAAACTAAACAGTTACCCTGAAACGTTCAAAACGAGGCCAGATTTTACCAGAGTGTCAATCGAGCAGCCTCAAAATCTACACAAGAGCAAAAAGTGGATGGGATTTGCAATATGCGCATCACTTGTGGAGGAAGTGGGGCAGACAATGAAAGAGGACAACTATTTGGTATCTTGTGGGTTAGCACCTAGGGGTAAATTTGGTATTGATGTGCCCCGAGAACTCGAGCACGTTAGGCCATTGTCAGAAGAACATCATCAACTATTGGTTTATTACATACCGCGGGCACAGATTCCCGAAGCGTGGTTCACTCAGACATTAACAACTAGAATGTACTTTTACATCATCATCGACAGCCCCTATGTAAAAGTTCAAAGATGTGAGGTCCGTTTTGTGTATCAGGAAGATATACAAGGGTTTGCTGATACAATTATCCTGTGCATGCAAAGGGAATATTCTCTTGAATCTCACAATAAGTTGGTGGTAGAAGAATGGATACGACTGATAAAATTGCAAGGTGCCCTAAATTTAGAGAGAATGACAAAACGGGATTCCAGAAGCCCACGGGAAAAATACTTTGAATTGCACTCACGAAAATATAGAAATTGGGACTGGTCTGACCCTCGTCCTGTTTCTTGTGACTTCAAGGGAGCTGTAATTTCCAAGTGGAAACGGTTCATGCCTTTCATCAACCAGGGCAACTCTGCAGAAATCCAACTGCCTCTGAGTGTGTTCGATGGTGATAATTGGTTGGGGTTTGCTGTATGTTGTTGGTTGTCCCACGACCAATATCCAAACATTAGTCATGGCAGTACCGTTCTCGATTCAGAGAATGTTGTGCTTACTTGTCGTCTGGCCTTATTCGCAGATGTTGCTTGGCAGGCCTTATTTGATTTCACGATCTATAGTCGTATTATGATACAGGAGCCATCGAAATACCATGCAACTTGGTTCCTTTATGTACCGCGCGATAATACAGTTCAAAGTGACATTTGGTGGCAATGCAAATTGGCCAGGATAACTATGTGGTTGTCTAGCCCATGCTTAGCGGTGCATAATTGTGCCCTTCGTCTACTATTTAAGGAGGACGTTGAACATCTTGTAGAAACACTGACCCTCGCCGAATTACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

834

Amino Acids

95.36

Weight (kDa)

5.64

Isoelectric Point (pI)

45.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 42 - 151 3.1e-08 Leucine-rich repeat region
LRR_13 PF23286 69 - 156 9.9e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 207 - 278 1.4e-07 Leucine-rich repeat region
C-JID PF20160 464 - 594 6.4e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1489
AccB1I GGYRCC 2 cut(s) 1124, 1889
AccI GTMKAC 2 cut(s) 44, 2443
AccII CGCG 3 cut(s) 1654, 2338, 2340
AciI CCGC 6 cut(s) 989, 1164, 1652, 1654, 2336, 2420
AclI AACGTT 1 cut(s) 1397
AclWI GGATC 1 cut(s) 998
AcoI YGGCCR 1 cut(s) 2382
AcsI RAATTY 6 cut(s) 637, 1086, 1214, 1322, 1568, 1897
AcuI CTGAAG 1 cut(s) 158
AfaI GTAC 5 cut(s) 382, 750, 1706, 2185, 2334
AfiI CCNNNNNNNGG 3 cut(s) 128, 720, 1674
AjnI CCWGG 3 cut(s) 1342, 2064, 2384
AleI CACNNNNGTG 2 cut(s) 1025, 1247
Alw21I GWGCWC 1 cut(s) 1602
Alw26I GTCTC 3 cut(s) 129, 440, 1363
AlwI GGATC 1 cut(s) 998
Ama87I CYCGRG 3 cut(s) 785, 1587, 1595
AoxI GGCC 5 cut(s) 1409, 1607, 2226, 2253, 2382
ApeKI GCWGC 5 cut(s) 171, 237, 702, 826, 1438
ApoI RAATTY 6 cut(s) 637, 1086, 1214, 1322, 1568, 1897
Asp700I GAANNNNTTC 3 cut(s) 213, 1272, 2045
AspA2I CCTAGG 1 cut(s) 1559
AspLEI GCGC 2 cut(s) 1490, 2340
AspS9I GGNCC 2 cut(s) 309, 1756
AsuHPI GGTGA 4 cut(s) 110, 952, 1039, 2123
AvaI CYCGRG 3 cut(s) 785, 1587, 1595
AvaII GGWCC 2 cut(s) 309, 1756
AvrII CCTAGG 1 cut(s) 1559
BaeGI GKGCMC 4 cut(s) 1587, 1660, 1894, 2437
BalI TGGCCA 1 cut(s) 2384
BanI GGYRCC 2 cut(s) 1124, 1889
BarI GAAGNNNNNNTAC 2 cut(s) 1851, 1883
Bbv12I GWGCWC 1 cut(s) 1602
BbvI GCAGC 5 cut(s) 183, 224, 714, 813, 1450
BceAI ACGGC 2 cut(s) 23, 1138
BcgI CGANNNNNNTGC 2 cut(s) 428, 462
BciT130I CCWGG 3 cut(s) 1344, 2066, 2386
BciVI GTATCC 1 cut(s) 1860
BcoDI GTCTC 3 cut(s) 129, 440, 1363
BfaI CTAG 5 cut(s) 599, 650, 1560, 1698, 2406
BfmI CTRYAG 5 cut(s) 169, 566, 808, 2076, 2275
BfuI GTATCC 1 cut(s) 1860
BglII AGATCT 1 cut(s) 16
BisI GCNGC 6 cut(s) 172, 238, 703, 827, 1164, 1439
BlnI CCTAGG 1 cut(s) 1559
BlpI GCTNAGC 1 cut(s) 2416
BlsI GCNGC 6 cut(s) 173, 239, 704, 828, 1165, 1440
Bme1390I CCNGG 3 cut(s) 1344, 2066, 2386
Bme18I GGWCC 2 cut(s) 309, 1756
BmeT110I CYCGRG 3 cut(s) 785, 1587, 1595
BmgT120I GGNCC 2 cut(s) 309, 1756
BmiI GGNNCC 7 cut(s) 66, 310, 912, 1126, 1891, 2298, 2324
BmrFI CCNGG 3 cut(s) 1344, 2066, 2386
BmsI GCATC 6 cut(s) 403, 774, 939, 986, 1099, 1499
BoxI GACNNNNGTC 1 cut(s) 1995
BplI GAGNNNNNCTC 2 cut(s) 672, 704
BpmI CTGGAG 2 cut(s) 121, 311
Bpu10I CCTNAGC 1 cut(s) 241
Bpu1102I GCTNAGC 1 cut(s) 2416
BpuEI CTTGAG 2 cut(s) 676, 1310
BsaBI GATNNNNATC 1 cut(s) 666
BsaI GGTCTC 1 cut(s) 1363
Bsc4I CCNNNNNNNGG 3 cut(s) 128, 720, 1674
Bse1I ACTGG 5 cut(s) 28, 355, 869, 1190, 1988
Bse3DI GCAATG 1 cut(s) 2378
Bse8I GATNNNNATC 1 cut(s) 666
BseBI CCWGG 3 cut(s) 1344, 2066, 2386
BseGI GGATG 7 cut(s) 164, 310, 593, 682, 977, 1016, 1476
BseJI GATNNNNATC 1 cut(s) 666
BseLI CCNNNNNNNGG 3 cut(s) 128, 720, 1674
BseMI GCAATG 1 cut(s) 2378
BseMII CTCAG 5 cut(s) 255, 465, 1345, 1697, 2087
BseNI ACTGG 5 cut(s) 28, 355, 869, 1190, 1988
BseSI GKGCMC 4 cut(s) 1587, 1660, 1894, 2437
BseXI GCAGC 5 cut(s) 183, 224, 714, 813, 1450
Bsh1236I CGCG 3 cut(s) 1654, 2338, 2340
BshFI GGCC 5 cut(s) 1411, 1609, 2228, 2255, 2384
BshNI GGYRCC 2 cut(s) 1124, 1889
BsiHKAI GWGCWC 1 cut(s) 1602
BsiHKCI CYCGRG 3 cut(s) 785, 1587, 1595
BslFI GGGAC 3 cut(s) 322, 1994, 2134
BslI CCNNNNNNNGG 3 cut(s) 128, 720, 1674
BsmAI GTCTC 3 cut(s) 129, 440, 1363
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 3 cut(s) 322, 1994, 2134
BsmI GAATGC 1 cut(s) 186
BsnI GGCC 5 cut(s) 1411, 1609, 2228, 2255, 2384
Bso31I GGTCTC 1 cut(s) 1363
BsoBI CYCGRG 3 cut(s) 785, 1587, 1595
Bsp1286I GDGCHC 5 cut(s) 1587, 1602, 1660, 1894, 2437
Bsp1407I TGTACA 1 cut(s) 380
Bsp143I GATC 6 cut(s) 16, 70, 439, 1003, 1153, 2271
Bsp1720I GCTNAGC 1 cut(s) 2416
BspACI CCGC 6 cut(s) 989, 1164, 1652, 1654, 2336, 2420
BspANI GGCC 5 cut(s) 1411, 1609, 2228, 2255, 2384
BspCNI CTCAG 5 cut(s) 254, 466, 1344, 1696, 2088
BspFNI CGCG 3 cut(s) 1654, 2338, 2340
BspLI GGNNCC 7 cut(s) 66, 310, 912, 1126, 1891, 2298, 2324
BspMAI CTGCAG 3 cut(s) 173, 812, 2080
BspPI GGATC 1 cut(s) 998
BspT107I GGYRCC 2 cut(s) 1124, 1889
BspTNI GGTCTC 1 cut(s) 1363
BsrDI GCAATG 1 cut(s) 2378
BsrGI TGTACA 1 cut(s) 380
BsrI ACTGG 5 cut(s) 28, 355, 869, 1190, 1988
BssMI GATC 6 cut(s) 16, 70, 439, 1003, 1153, 2271
BssT1I CCWWGG 3 cut(s) 204, 1227, 1559
Bst2UI CCWGG 3 cut(s) 1344, 2066, 2386
Bst4CI ACNGT 6 cut(s) 570, 1304, 1385, 2046, 2188, 2350
Bst6I CTCTTC 1 cut(s) 72
BstAPI GCANNNNNTGC 1 cut(s) 2243
BstAUI TGTACA 1 cut(s) 380
BstC8I GCNNGC 5 cut(s) 287, 451, 1656, 1814, 2253
BstDEI CTNAG 7 cut(s) 241, 474, 716, 1331, 1683, 2096, 2416
BstDSI CCRYGG 2 cut(s) 1652, 1934
BstF5I GGATG 7 cut(s) 164, 310, 593, 682, 977, 1016, 1476
BstFNI CGCG 3 cut(s) 1654, 2338, 2340
BstHHI GCGC 2 cut(s) 1490, 2340
BstKTI GATC 6 cut(s) 19, 73, 442, 1006, 1156, 2274
BstMAI GTCTC 3 cut(s) 129, 440, 1363
BstMBI GATC 6 cut(s) 16, 70, 439, 1003, 1153, 2271
BstMWI GCNNNNNNNGC 6 cut(s) 823, 1487, 1606, 2234, 2243, 2252
BstNI CCWGG 3 cut(s) 1344, 2066, 2386
BstNSI RCATGY 2 cut(s) 449, 1816
BstPAI GACNNNNGTC 1 cut(s) 1995
BstSCI CCNGG 3 cut(s) 1342, 2064, 2384
BstSFI CTRYAG 5 cut(s) 169, 566, 808, 2076, 2275
BstSLI GKGCMC 4 cut(s) 1587, 1660, 1894, 2437
BstUI CGCG 3 cut(s) 1654, 2338, 2340
BstV1I GCAGC 5 cut(s) 183, 224, 714, 813, 1450
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
BsuI GTATCC 1 cut(s) 1860
BsuRI GGCC 5 cut(s) 1411, 1609, 2228, 2255, 2384
BtgI CCRYGG 2 cut(s) 1652, 1934
BtgZI GCGATG 1 cut(s) 962
BtsCI GGATG 7 cut(s) 164, 310, 593, 682, 977, 1016, 1476
BtsIMutI CAGTG 4 cut(s) 876, 1295, 1309, 2480
Cac8I GCNNGC 5 cut(s) 287, 451, 1656, 1814, 2253
CfoI GCGC 2 cut(s) 1490, 2340
Cfr13I GGNCC 2 cut(s) 309, 1756
Cfr42I CCGCGG 1 cut(s) 1655
Csp6I GTAC 5 cut(s) 381, 749, 1705, 2184, 2333
CviAII CATG 7 cut(s) 446, 556, 1813, 2050, 2177, 2312, 2412
CviQI GTAC 5 cut(s) 381, 749, 1705, 2184, 2333
DdeI CTNAG 7 cut(s) 241, 474, 716, 1331, 1683, 2096, 2416
DpnI GATC 6 cut(s) 18, 72, 441, 1005, 1155, 2273
DpnII GATC 6 cut(s) 16, 70, 439, 1003, 1153, 2271
DraI TTTAAA 1 cut(s) 1321
EaeI YGGCCR 1 cut(s) 2382
Eam1104I CTCTTC 1 cut(s) 72
EarI CTCTTC 1 cut(s) 72
EciI GGCGGA 1 cut(s) 1004
Eco130I CCWWGG 3 cut(s) 204, 1227, 1559
Eco147I AGGCCT 1 cut(s) 2255
Eco31I GGTCTC 1 cut(s) 1363
Eco32I GATATC 1 cut(s) 1286
Eco47I GGWCC 2 cut(s) 309, 1756
Eco57I CTGAAG 1 cut(s) 158
Eco88I CYCGRG 3 cut(s) 785, 1587, 1595
EcoRI GAATTC 1 cut(s) 1086
EcoRII CCWGG 3 cut(s) 1342, 2064, 2384
EcoRV GATATC 1 cut(s) 1286
EcoT14I CCWWGG 3 cut(s) 204, 1227, 1559
EcoT22I ATGCAT 1 cut(s) 979
ErhI CCWWGG 3 cut(s) 204, 1227, 1559
Esp3I CGTCTC 1 cut(s) 129
FaeI CATG 7 cut(s) 449, 559, 1816, 2053, 2180, 2315, 2415
FaqI GGGAC 3 cut(s) 322, 1994, 2134
FatI CATG 7 cut(s) 445, 555, 1812, 2049, 2176, 2311, 2411
FauI CCCGC 1 cut(s) 1647
FblI GTMKAC 2 cut(s) 44, 2443
Fnu4HI GCNGC 6 cut(s) 172, 238, 703, 827, 1164, 1439
FokI GGATG 7 cut(s) 151, 317, 600, 689, 964, 1003, 1483
Fsp4HI GCNGC 6 cut(s) 172, 238, 703, 827, 1164, 1439
FspAI RTGCGCAY 1 cut(s) 1489
FspBI CTAG 5 cut(s) 599, 650, 1560, 1698, 2406
FspI TGCGCA 1 cut(s) 1489
GlaI GCGC 2 cut(s) 1489, 2339
GluI GCNGC 6 cut(s) 172, 238, 703, 827, 1164, 1439
GsuI CTGGAG 2 cut(s) 121, 311
HaeIII GGCC 5 cut(s) 1411, 1609, 2228, 2255, 2384
HhaI GCGC 2 cut(s) 1490, 2340
Hin1II CATG 7 cut(s) 449, 559, 1816, 2053, 2180, 2315, 2415
Hin6I GCGC 2 cut(s) 1488, 2338
HinP1I GCGC 2 cut(s) 1488, 2338
HincII GTYRAC 2 cut(s) 45, 1120
HindII GTYRAC 2 cut(s) 45, 1120
HindIII AAGCTT 1 cut(s) 283
HphI GGTGA 4 cut(s) 110, 952, 1039, 2123
Hpy166II GTNNAC 5 cut(s) 29, 45, 1120, 1680, 2444
Hpy8I GTNNAC 5 cut(s) 29, 45, 1120, 1680, 2444
HpyAV CCTTC 4 cut(s) 224, 263, 829, 2447
HpyCH4III ACNGT 6 cut(s) 570, 1304, 1385, 2046, 2188, 2350
HpyCH4IV ACGT 3 cut(s) 1397, 1602, 2460
HpyF10VI GCNNNNNNNGC 6 cut(s) 823, 1487, 1606, 2234, 2243, 2252
HpyF3I CTNAG 7 cut(s) 241, 474, 716, 1331, 1683, 2096, 2416
HpySE526I ACGT 3 cut(s) 1397, 1602, 2460
Hsp92II CATG 7 cut(s) 449, 559, 1816, 2053, 2180, 2315, 2415
HspAI GCGC 2 cut(s) 1488, 2338
KspI CCGCGG 1 cut(s) 1655
Kzo9I GATC 6 cut(s) 16, 70, 439, 1003, 1153, 2271
LmnI GCTCC 6 cut(s) 179, 292, 458, 680, 2021, 2296
Lsp1109I GCAGC 5 cut(s) 183, 224, 714, 813, 1450
LweI GCATC 6 cut(s) 403, 774, 939, 986, 1099, 1499
MaeI CTAG 5 cut(s) 599, 650, 1560, 1698, 2406
MaeII ACGT 3 cut(s) 1397, 1602, 2460
MaeIII GTNAC 5 cut(s) 255, 1304, 1385, 2009, 2357
MalI GATC 6 cut(s) 18, 72, 441, 1005, 1155, 2273
MboI GATC 6 cut(s) 16, 70, 439, 1003, 1153, 2271
MfeI CAATTG 2 cut(s) 336, 821
MflI RGATCY 1 cut(s) 16
MhlI GDGCHC 5 cut(s) 1587, 1602, 1660, 1894, 2437
MlsI TGGCCA 1 cut(s) 2384
MluNI TGGCCA 1 cut(s) 2384
MlyI GAGTC 3 cut(s) 884, 1187, 1301
MmeI TCCRAC 1 cut(s) 2110
Mox20I TGGCCA 1 cut(s) 2384
Mph1103I ATGCAT 1 cut(s) 979
MroXI GAANNNNTTC 3 cut(s) 213, 1272, 2045
MscI TGGCCA 1 cut(s) 2384
MseI TTAA 8 cut(s) 90, 150, 698, 731, 1320, 1326, 1691, 2451
MslI CAYNNNNRTG 4 cut(s) 303, 1025, 1247, 2430
Msp20I TGGCCA 1 cut(s) 2384
MspA1I CMGCKG 1 cut(s) 1654
MspR9I CCNGG 3 cut(s) 1344, 2066, 2386
MunI CAATTG 2 cut(s) 336, 821
Mva1269I GAATGC 1 cut(s) 186
MvaI CCWGG 3 cut(s) 1344, 2066, 2386
MvnI CGCG 3 cut(s) 1654, 2338, 2340
MwoI GCNNNNNNNGC 6 cut(s) 823, 1487, 1606, 2234, 2243, 2252
NdeII GATC 6 cut(s) 16, 70, 439, 1003, 1153, 2271
NlaIII CATG 7 cut(s) 449, 559, 1816, 2053, 2180, 2315, 2415
NlaIV GGNNCC 7 cut(s) 66, 310, 912, 1126, 1891, 2298, 2324
NmeAIII GCCGAG 1 cut(s) 608
NmuCI GTSAC 3 cut(s) 1304, 2009, 2357
NsbI TGCGCA 1 cut(s) 1489
NsiI ATGCAT 1 cut(s) 979
NspI RCATGY 2 cut(s) 449, 1816
OliI CACNNNNGTG 2 cut(s) 1025, 1247
PaeI GCATGC 1 cut(s) 1816
PaeR7I CTCGAG 2 cut(s) 785, 1595
PasI CCCWGGG 1 cut(s) 1343
PceI AGGCCT 1 cut(s) 2255
PcsI WCGNNNNNNNCGW 1 cut(s) 1403
PctI GAATGC 1 cut(s) 186
PdmI GAANNNNTTC 3 cut(s) 213, 1272, 2045
PkrI GCNGC 6 cut(s) 173, 239, 704, 828, 1165, 1440
PleI GAGTC 3 cut(s) 883, 1186, 1301
PpsI GAGTC 3 cut(s) 883, 1186, 1301
PshAI GACNNNNGTC 1 cut(s) 1995
Psp1406I AACGTT 1 cut(s) 1397
Psp6I CCWGG 3 cut(s) 1342, 2064, 2384
PspGI CCWGG 3 cut(s) 1342, 2064, 2384
PspN4I GGNNCC 7 cut(s) 66, 310, 912, 1126, 1891, 2298, 2324
PspPI GGNCC 2 cut(s) 309, 1756
PspXI VCTCGAGB 1 cut(s) 1595
PstI CTGCAG 3 cut(s) 173, 812, 2080
PsuI RGATCY 1 cut(s) 16
RsaI GTAC 5 cut(s) 382, 750, 1706, 2185, 2334
RsaNI GTAC 5 cut(s) 381, 749, 1705, 2184, 2333
RseI CAYNNNNRTG 4 cut(s) 303, 1025, 1247, 2430
SacII CCGCGG 1 cut(s) 1655
SalI GTCGAC 1 cut(s) 43
SaqAI TTAA 8 cut(s) 90, 150, 698, 731, 1320, 1326, 1691, 2451
SatI GCNGC 6 cut(s) 172, 238, 703, 827, 1164, 1439
Sau3AI GATC 6 cut(s) 16, 70, 439, 1003, 1153, 2271
Sau96I GGNCC 2 cut(s) 309, 1756
SchI GAGTC 3 cut(s) 884, 1187, 1301
ScrFI CCNGG 3 cut(s) 1344, 2066, 2386
SduI GDGCHC 5 cut(s) 1587, 1602, 1660, 1894, 2437
SfaNI GCATC 6 cut(s) 403, 774, 939, 986, 1099, 1499
SfcI CTRYAG 5 cut(s) 169, 566, 808, 2076, 2275
Sfr274I CTCGAG 2 cut(s) 785, 1595
Sfr303I CCGCGG 1 cut(s) 1655
SgrBI CCGCGG 1 cut(s) 1655
SinI GGWCC 2 cut(s) 309, 1756
SlaI CTCGAG 2 cut(s) 785, 1595
SmiMI CAYNNNNRTG 4 cut(s) 303, 1025, 1247, 2430
SmlI CTYRAG 4 cut(s) 655, 785, 1289, 1595
SmoI CTYRAG 4 cut(s) 655, 785, 1289, 1595
SphI GCATGC 1 cut(s) 1816
SseBI AGGCCT 1 cut(s) 2255
SsiI CCGC 6 cut(s) 989, 1164, 1652, 1654, 2336, 2420
SspI AATATT 2 cut(s) 222, 1826
SspMI CTAG 5 cut(s) 599, 650, 1560, 1698, 2406
StuI AGGCCT 1 cut(s) 2255
StyD4I CCNGG 3 cut(s) 1342, 2064, 2384
StyI CCWWGG 3 cut(s) 204, 1227, 1559
TaaI ACNGT 6 cut(s) 570, 1304, 1385, 2046, 2188, 2350
TaiI ACGT 3 cut(s) 1400, 1605, 2463
TaqII GACCGA 1 cut(s) 1105
TatI WGTACW 3 cut(s) 380, 748, 1704
TauI GCSGC 1 cut(s) 1166
Tru1I TTAA 8 cut(s) 90, 150, 698, 731, 1320, 1326, 1691, 2451
Tru9I TTAA 8 cut(s) 90, 150, 698, 731, 1320, 1326, 1691, 2451
TscAI CASTG 4 cut(s) 876, 1302, 1309, 2487
TseFI GTSAC 3 cut(s) 1304, 2009, 2357
TseI GCWGC 5 cut(s) 171, 237, 702, 826, 1438
Tsp45I GTSAC 3 cut(s) 1304, 2009, 2357
TspDTI ATGAA 9 cut(s) 187, 287, 506, 535, 572, 1207, 1535, 2038, 2047
TspGWI ACGGA 2 cut(s) 74, 1748
TspRI CASTG 4 cut(s) 876, 1302, 1309, 2487
VpaK11BI GGWCC 2 cut(s) 309, 1756
XapI RAATTY 6 cut(s) 637, 1086, 1214, 1322, 1568, 1897
XceI RCATGY 2 cut(s) 449, 1816
XcmI CCANNNNNNNNNTGG 1 cut(s) 1066
XhoI CTCGAG 2 cut(s) 785, 1595
XmaJI CCTAGG 1 cut(s) 1559
XmiI GTMKAC 2 cut(s) 44, 2443
XmnI GAANNNNTTC 3 cut(s) 213, 1272, 2045
XspI CTAG 5 cut(s) 599, 650, 1560, 1698, 2406
Zsp2I ATGCAT 1 cut(s) 979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.