Prupe.8G102900_v2.0.a1

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000129
Physical Location & Seq
Forward (+)
13415023 .. 13419811
4789 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G102900.1

Sequence Viewer

Length: 2391 bp
ATGACGTATGGACGTATACATGGCTCCTTCTTGAAGCATGAAGAAACCTTTGAAGACAAGAAAGAGAAGATGCAAAGCTGGAGAGATGCACTTATTGCTGTAGCCAATCTTGCTGGATGGCTTGTTGAAGATATTGTAGGAATGAGTTTCACTAGATTAAACCAAACAATTTTAAGTGAATCCAAGGATTTAGTTGCGATAGATTCTCGTATAGAAGAACTGCTTTCTTTCTTAGAGATAGGCTATCTAGCCATTGTTAGAGAGGCAACTGAAAAGCAAGATCTAGAACATTTACAAGAGCAACTTCTTTCAGACTTGCTGAAAAGCAATGTAAAGATACAAAATATTGATATGGAAGACATAATAGGGCATAGACAACGTAATAAAAAGGCTCTTATTATTGTTGATGATGTGGATGAGGTTGAGCAAATGGAAGCACTATGTGATCGGACTTGGTTTGGTCCAGGGAGTAGAATCATCATAACATCAACAGATGAACATGTGCTACGCAGATATGCAGACAAAATATATCAGGTTAAGCTGTTAACTAATGATGAAGCTCTTCAGCTCTTTGAAACTTTTCTCAAGCTATCCAAGGACTTTTTAACATATGCTAAGGGCCTTCCATTAGCTATTAAAGTTCTGGGTTCATTCCTCTGTAATAGGCCACAAAATGCATGGTCAAGTGCATTAGATAGACTAAAAGAAAATCCTGAGGAAAAATTCATTGATGTCCTTAAAGTGAGTTTTGATGGATTATCATTAGAAACAGAAAAAAAAGTTTTTTTGGACATTGCCTCTTTCTTTAAGGGAGAGAACAAAGATCGTGTAATAAGAATATTAGAAACTAGTTGTGGCTACCTTCCGGAAATTGATTTAGACATTCTTATGGAAAAATCTCTATTAACTCTATTTGGAAGAAATTTGTGGATGCATGATTTGATACAAGAATTGGGTTGGAAAATTGTTCGTCGAGAATGTCGTAAGAGGCCTGGAGAACGTAGCAGGTTGTGGCTTTACAAGGATATCATCCCTGTACTTGAAAATAATAAGCAACTTATTCTTGGCTGTTCTTTATTAGGGAACCAGCGCAATAGAAAGCATATTCCTCAAATTGCCAAAAAAAGAGGAGAGGTGAATTTAAATGTGAATGCCTTCTCAAAGATGGAAAATTTAAGATTGCTCAAGATTTGGAATGGGAACTTTCATGGAAACATTGAATATCTTTCTAATGAGTTACAATTTCTGGAATGGCATGAGCGTCCTTTAAATTCTTTGCCATCAGACTTTGAATCAGACAAGCTTGTTGAACTCAACTTGTATTCGAGCCGCATTGAACAACTATGGGAGGGAGAAAAGTTTTTTCCTCTGACCAAAAGAAAAGAAAAGGAAATGACACTATACTGCAAATCTGTAGAGAGCCTTCCGCCTTTCATTAGCTTGGAATCTCTTAAAAGTCTCACTCTGTCCGCCTGTTCAAGCCTCAAGAAGTTTCCTGACATTGAAGGAAATATGGAAAGCTTATTGGAGCTTAATCTAGATGGGACTGCCATAGAAGATTTACCTCCATCATTTGGACTTTTGACTGGTCGGTCTTGTTTGAATTTAGGAGACTGCAAAAACCTTTCGTGTCTTCCTAGTAGCATTAAATATTTGACATCTCTGAAAAGCCTTATTCTAGCAGGTTGCTCAAAACTTGATGGCATACCTGAGAATCTTAATTGTTTTGAATTTCTGGAGATGCTTGATCTAAGTGGAACTGCTTTAAGCCAAACGTCATCCTTTGCAGGCTTTTATTTTTGGTGGTGGGGTGGAAGGGGATCATTCATTTCTTTGAAAAATCTAAACTTAAGTGACTGCAATTTGATAGAGGGAGCACTTCTTAATGGTCTTGCAAGTTTATACTCAGAAATATTAAATTTACGTGGTAATAAGTTTGTTCAGCTACCTGAAAGCTTAAACATCTGGACGTATTATTCCAGAATGGTTCACCATGTAGTTAGCGGGAATTTCATCAAACTCCAGCTATCTCAAGATTTGAAGGATGATAGGAACTGGATGGGGGTTGTCCTATGTGTTGAGTTTTCAGTCAAGGGGACTCATGAATCTGAAGTGGAACTAGAACTAATGAATCAGATTGATTCAAATTCAGAAACTTTTCACTTATATCATTGCACATTGGGGACTGAGGAATTTGCAATGGAACCAGACCTCCTTACCTCTGCCCAAATGTTTCGCAAGTTCATTACATTTAAACCTCGGGTCCAGAAGTGTGGGATTCGTCTACTATACAAGCAAGATGTTCCAGGGTTGATCGAAACATTCATGCAGGGGAGATCAGTTCCAACTTCTGAAGAAAGCTCTGTAAATCTGCTTTCTTCAGAGCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 LRR_8 NB-ARC TIR

Protein Analysis

797

Amino Acids

91.29

Weight (kDa)

5.44

Isoelectric Point (pI)

47.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1591
Acc36I ACCTGC 2 cut(s) 996, 1673
AccB7I CCANNNNNTGG 1 cut(s) 1574
AccI GTMKAC 2 cut(s) 16, 2284
AccIII TCCGGA 1 cut(s) 865
AciI CCGC 4 cut(s) 1330, 1427, 1470, 2004
AclWI GGATC 1 cut(s) 1828
AcuI CTGAAG 4 cut(s) 548, 2130, 2364, 2373
AdeI CACNNNGTG 1 cut(s) 443
AfaI GTAC 1 cut(s) 1038
AfiI CCNNNNNNNGG 1 cut(s) 1574
AflII CTTAAG 1 cut(s) 1849
AflIII ACRYGT 1 cut(s) 499
AhlI ACTAGT 1 cut(s) 848
AjnI CCWGG 3 cut(s) 463, 991, 2305
AloI GAACNNNNNNTCC 2 cut(s) 2196, 2228
Alw21I GWGCWC 1 cut(s) 1879
Alw26I GTCTC 2 cut(s) 1463, 1605
AlwI GGATC 1 cut(s) 1828
Ama87I CYCGRG 1 cut(s) 2259
Aor13HI TCCGGA 1 cut(s) 865
AoxI GGCC 3 cut(s) 619, 665, 989
Asp700I GAANNNNTTC 4 cut(s) 561, 579, 1154, 2157
AspLEI GCGC 1 cut(s) 1092
AspS9I GGNCC 3 cut(s) 461, 619, 2263
AsuHPI GGTGA 2 cut(s) 1147, 1982
AvaI CYCGRG 1 cut(s) 2259
AvaII GGWCC 2 cut(s) 461, 2263
AxyI CCTNAGG 1 cut(s) 714
BarI GAAGNNNNNNTAC 2 cut(s) 1407, 1439
BbsI GAAGAC 3 cut(s) 60, 363, 1625
Bbv12I GWGCWC 1 cut(s) 1879
BccI CCATC 8 cut(s) 111, 746, 1159, 1288, 1535, 1576, 1694, 2053
BciT130I CCWGG 3 cut(s) 465, 993, 2307
BcoDI GTCTC 2 cut(s) 1463, 1605
BcuI ACTAGT 1 cut(s) 848
BfaI CTAG 8 cut(s) 153, 248, 284, 849, 1538, 1638, 1679, 2120
BfmI CTRYAG 2 cut(s) 99, 1413
BfrI CTTAAG 1 cut(s) 1849
BfuAI ACCTGC 2 cut(s) 996, 1673
BglII AGATCT 1 cut(s) 280
BisI GCNGC 1 cut(s) 1330
BlsI GCNGC 1 cut(s) 1331
Bme1390I CCNGG 3 cut(s) 465, 993, 2307
Bme18I GGWCC 2 cut(s) 461, 2263
BmeT110I CYCGRG 1 cut(s) 2259
BmgT120I GGNCC 3 cut(s) 461, 619, 2263
BmiI GGNNCC 4 cut(s) 25, 1085, 2205, 2264
BmrFI CCNGG 3 cut(s) 465, 993, 2307
BmsI GCATC 4 cut(s) 60, 76, 921, 1731
BpiI GAAGAC 3 cut(s) 60, 363, 1625
BpmI CTGGAG 4 cut(s) 100, 1014, 1757, 2006
Bpu10I CCTNAGC 1 cut(s) 615
BpuEI CTTGAG 4 cut(s) 569, 1169, 1469, 2016
BsaAI YACGTR 1 cut(s) 1925
BsaJI CCNNGG 5 cut(s) 183, 464, 594, 2258, 2306
BsaWI WCCGGW 1 cut(s) 865
BsaXI ACNNNNNCTCC 2 cut(s) 2196, 2226
Bsc4I CCNNNNNNNGG 1 cut(s) 1574
Bse1I ACTGG 2 cut(s) 1591, 2060
Bse21I CCTNAGG 1 cut(s) 714
Bse3DI GCAATG 4 cut(s) 334, 792, 2170, 2205
BseAI TCCGGA 1 cut(s) 865
BseBI CCWGG 3 cut(s) 465, 993, 2307
BseDI CCNNGG 5 cut(s) 183, 464, 594, 2258, 2306
BseGI GGATG 7 cut(s) 122, 421, 936, 1029, 1778, 2050, 2064
BseLI CCNNNNNNNGG 1 cut(s) 1574
BseMI GCAATG 4 cut(s) 334, 792, 2170, 2205
BseMII CTCAG 4 cut(s) 705, 1701, 1920, 2178
BseNI ACTGG 2 cut(s) 1591, 2060
BseRI GAGGAG 1 cut(s) 1143
BshFI GGCC 3 cut(s) 621, 667, 991
BsiHKAI GWGCWC 1 cut(s) 1879
BsiHKCI CYCGRG 1 cut(s) 2259
BsiSI CCGG 1 cut(s) 866
BslFI GGGAC 3 cut(s) 1558, 2110, 2197
BslI CCNNNNNNNGG 1 cut(s) 1574
BsmAI GTCTC 2 cut(s) 1463, 1605
BsmFI GGGAC 3 cut(s) 1558, 2110, 2197
BsmI GAATGC 1 cut(s) 1156
BsnI GGCC 3 cut(s) 621, 667, 991
BsoBI CYCGRG 1 cut(s) 2259
Bsp1286I GDGCHC 1 cut(s) 1879
Bsp13I TCCGGA 1 cut(s) 865
Bsp143I GATC 7 cut(s) 280, 445, 823, 1747, 1820, 2313, 2336
BspACI CCGC 4 cut(s) 1330, 1427, 1470, 2004
BspANI GGCC 3 cut(s) 621, 667, 991
BspCNI CTCAG 4 cut(s) 706, 1702, 1919, 2179
BspEI TCCGGA 1 cut(s) 865
BspHI TCATGA 1 cut(s) 2101
BspLI GGNNCC 4 cut(s) 25, 1085, 2205, 2264
BspMI ACCTGC 2 cut(s) 996, 1673
BspPI GGATC 1 cut(s) 1828
BspQI GCTCTTC 1 cut(s) 567
BspTI CTTAAG 1 cut(s) 1849
BsrDI GCAATG 4 cut(s) 334, 792, 2170, 2205
BsrI ACTGG 2 cut(s) 1591, 2060
BssECI CCNNGG 5 cut(s) 183, 464, 594, 2258, 2306
BssMI GATC 7 cut(s) 280, 445, 823, 1747, 1820, 2313, 2336
BssNAI GTATAC 1 cut(s) 17
BssT1I CCWWGG 2 cut(s) 183, 594
Bst1107I GTATAC 1 cut(s) 17
Bst2UI CCWGG 3 cut(s) 465, 993, 2307
Bst6I CTCTTC 1 cut(s) 567
BstAFI CTTAAG 1 cut(s) 1849
BstAPI GCANNNNNTGC 1 cut(s) 95
BstBAI YACGTR 1 cut(s) 1925
BstC8I GCNNGC 1 cut(s) 1789
BstDEI CTNAG 7 cut(s) 232, 615, 714, 1710, 1751, 1906, 2187
BstF5I GGATG 7 cut(s) 122, 421, 936, 1029, 1778, 2050, 2064
BstHHI GCGC 1 cut(s) 1092
BstKTI GATC 7 cut(s) 283, 448, 826, 1750, 1823, 2316, 2339
BstMAI GTCTC 2 cut(s) 1463, 1605
BstMBI GATC 7 cut(s) 280, 445, 823, 1747, 1820, 2313, 2336
BstMWI GCNNNNNNNGC 2 cut(s) 95, 110
BstNI CCWGG 3 cut(s) 465, 993, 2307
BstNSI RCATGY 1 cut(s) 503
BstSCI CCNGG 3 cut(s) 463, 991, 2305
BstSFI CTRYAG 2 cut(s) 99, 1413
BstV2I GAAGAC 3 cut(s) 60, 363, 1625
BstX2I RGATCY 1 cut(s) 280
BstXI CCANNNNNNTGG 1 cut(s) 2273
BstYI RGATCY 1 cut(s) 280
BstZ17I GTATAC 1 cut(s) 17
Bsu36I CCTNAGG 1 cut(s) 714
BsuRI GGCC 3 cut(s) 621, 667, 991
BtsCI GGATG 7 cut(s) 122, 421, 936, 1029, 1778, 2050, 2064
BveI ACCTGC 2 cut(s) 996, 1673
Cac8I GCNNGC 1 cut(s) 1789
CciI TCATGA 1 cut(s) 2101
CfoI GCGC 1 cut(s) 1092
Cfr13I GGNCC 3 cut(s) 461, 619, 2263
CseI GACGC 1 cut(s) 1250
Csp6I GTAC 1 cut(s) 1037
CviQI GTAC 1 cut(s) 1037
DdeI CTNAG 7 cut(s) 232, 615, 714, 1710, 1751, 1906, 2187
DpnI GATC 7 cut(s) 282, 447, 825, 1749, 1822, 2315, 2338
DpnII GATC 7 cut(s) 280, 445, 823, 1747, 1820, 2313, 2336
DraI TTTAAA 3 cut(s) 1143, 1269, 2254
DraIII CACNNNGTG 1 cut(s) 443
DrdI GACNNNNNNGTC 1 cut(s) 1591
DseDI GACNNNNNNGTC 1 cut(s) 1591
Eam1104I CTCTTC 1 cut(s) 567
EarI CTCTTC 1 cut(s) 567
EciI GGCGGA 2 cut(s) 1416, 1459
Eco130I CCWWGG 2 cut(s) 183, 594
Eco147I AGGCCT 1 cut(s) 991
Eco32I GATATC 1 cut(s) 1027
Eco47I GGWCC 2 cut(s) 461, 2263
Eco57I CTGAAG 4 cut(s) 548, 2130, 2364, 2373
Eco81I CCTNAGG 1 cut(s) 714
Eco88I CYCGRG 1 cut(s) 2259
EcoO109I RGGNCCY 1 cut(s) 619
EcoRII CCWGG 3 cut(s) 463, 991, 2305
EcoRV GATATC 1 cut(s) 1027
EcoT14I CCWWGG 2 cut(s) 183, 594
EcoT22I ATGCAT 2 cut(s) 679, 936
ErhI CCWWGG 2 cut(s) 183, 594
FalI AAGNNNNNCTT 4 cut(s) 207, 239, 288, 320
FaqI GGGAC 3 cut(s) 1558, 2110, 2197
FauI CCCGC 1 cut(s) 1997
FauNDI CATATG 1 cut(s) 610
FblI GTMKAC 2 cut(s) 16, 2284
Fnu4HI GCNGC 1 cut(s) 1330
FokI GGATG 7 cut(s) 129, 428, 943, 1016, 1765, 2057, 2071
Fsp4HI GCNGC 1 cut(s) 1330
FspBI CTAG 8 cut(s) 153, 248, 284, 849, 1538, 1638, 1679, 2120
GlaI GCGC 1 cut(s) 1091
GluI GCNGC 1 cut(s) 1330
GsuI CTGGAG 4 cut(s) 100, 1014, 1757, 2006
HaeIII GGCC 3 cut(s) 621, 667, 991
HapII CCGG 1 cut(s) 866
HgaI GACGC 1 cut(s) 1250
HhaI GCGC 1 cut(s) 1092
Hin6I GCGC 1 cut(s) 1090
HinP1I GCGC 1 cut(s) 1090
HincII GTYRAC 1 cut(s) 546
HindII GTYRAC 1 cut(s) 546
HindIII AAGCTT 3 cut(s) 1301, 1519, 1954
HpaI GTTAAC 1 cut(s) 546
HpaII CCGG 1 cut(s) 866
HphI GGTGA 2 cut(s) 1147, 1982
Hpy166II GTNNAC 4 cut(s) 17, 546, 1990, 2285
Hpy8I GTNNAC 4 cut(s) 17, 546, 1990, 2285
Hpy99I CGWCG 1 cut(s) 975
HpyAV CCTTC 8 cut(s) 37, 632, 872, 1165, 1433, 1499, 1809, 2035
HpyCH4IV ACGT 7 cut(s) 5, 13, 379, 1000, 1775, 1924, 1970
HpyF10VI GCNNNNNNNGC 2 cut(s) 95, 110
HpyF3I CTNAG 7 cut(s) 232, 615, 714, 1710, 1751, 1906, 2187
HpySE526I ACGT 7 cut(s) 5, 13, 379, 1000, 1775, 1924, 1970
HspAI GCGC 1 cut(s) 1090
Kpn2I TCCGGA 1 cut(s) 865
KspAI GTTAAC 1 cut(s) 546
Kzo9I GATC 7 cut(s) 280, 445, 823, 1747, 1820, 2313, 2336
LguI GCTCTTC 1 cut(s) 567
LmnI GCTCC 3 cut(s) 29, 1528, 1874
LweI GCATC 4 cut(s) 60, 76, 921, 1731
MaeI CTAG 8 cut(s) 153, 248, 284, 849, 1538, 1638, 1679, 2120
MaeII ACGT 7 cut(s) 5, 13, 379, 1000, 1775, 1924, 1970
MaeIII GTNAC 2 cut(s) 1236, 1853
MalI GATC 7 cut(s) 282, 447, 825, 1749, 1822, 2315, 2338
MboI GATC 7 cut(s) 280, 445, 823, 1747, 1820, 2313, 2336
MflI RGATCY 1 cut(s) 280
MhlI GDGCHC 1 cut(s) 1879
MlyI GAGTC 1 cut(s) 2092
MmeI TCCRAC 2 cut(s) 938, 2369
Mph1103I ATGCAT 2 cut(s) 679, 936
MroI TCCGGA 1 cut(s) 865
MroXI GAANNNNTTC 4 cut(s) 561, 579, 1154, 2157
MslI CAYNNNNRTG 1 cut(s) 887
MspCI CTTAAG 1 cut(s) 1849
MspI CCGG 1 cut(s) 866
MspR9I CCNGG 3 cut(s) 465, 993, 2307
Mva1269I GAATGC 1 cut(s) 1156
MvaI CCWGG 3 cut(s) 465, 993, 2307
MwoI GCNNNNNNNGC 2 cut(s) 95, 110
NdeI CATATG 1 cut(s) 610
NdeII GATC 7 cut(s) 280, 445, 823, 1747, 1820, 2313, 2336
NlaIV GGNNCC 4 cut(s) 25, 1085, 2205, 2264
NmuCI GTSAC 1 cut(s) 1853
NsiI ATGCAT 2 cut(s) 679, 936
NspI RCATGY 1 cut(s) 503
PagI TCATGA 1 cut(s) 2101
PceI AGGCCT 1 cut(s) 991
PciI ACATGT 1 cut(s) 499
PciSI GCTCTTC 1 cut(s) 567
PcsI WCGNNNNNNNCGW 1 cut(s) 979
PctI GAATGC 1 cut(s) 1156
PdmI GAANNNNTTC 4 cut(s) 561, 579, 1154, 2157
PflMI CCANNNNNTGG 1 cut(s) 1574
PkrI GCNGC 1 cut(s) 1331
PleI GAGTC 1 cut(s) 2092
PpsI GAGTC 1 cut(s) 2092
Ppu21I YACGTR 1 cut(s) 1925
PscI ACATGT 1 cut(s) 499
Psp6I CCWGG 3 cut(s) 463, 991, 2305
PspGI CCWGG 3 cut(s) 463, 991, 2305
PspN4I GGNNCC 4 cut(s) 25, 1085, 2205, 2264
PspPI GGNCC 3 cut(s) 461, 619, 2263
PsrI GAACNNNNNNTAC 2 cut(s) 489, 521
PsuI RGATCY 1 cut(s) 280
RsaI GTAC 1 cut(s) 1038
RsaNI GTAC 1 cut(s) 1037
RseI CAYNNNNRTG 1 cut(s) 887
SapI GCTCTTC 1 cut(s) 567
SatI GCNGC 1 cut(s) 1330
Sau3AI GATC 7 cut(s) 280, 445, 823, 1747, 1820, 2313, 2336
Sau96I GGNCC 3 cut(s) 461, 619, 2263
SchI GAGTC 1 cut(s) 2092
ScrFI CCNGG 3 cut(s) 465, 993, 2307
SduI GDGCHC 1 cut(s) 1879
SfaNI GCATC 4 cut(s) 60, 76, 921, 1731
SfcI CTRYAG 2 cut(s) 99, 1413
SinI GGWCC 2 cut(s) 461, 2263
SmiI ATTTAAAT 1 cut(s) 1143
SmiMI CAYNNNNRTG 1 cut(s) 887
SmlI CTYRAG 5 cut(s) 584, 1184, 1484, 1849, 2031
SmoI CTYRAG 5 cut(s) 584, 1184, 1484, 1849, 2031
SpeI ACTAGT 1 cut(s) 848
SseBI AGGCCT 1 cut(s) 991
SsiI CCGC 4 cut(s) 1330, 1427, 1470, 2004
SspI AATATT 4 cut(s) 346, 840, 1652, 1914
SspMI CTAG 8 cut(s) 153, 248, 284, 849, 1538, 1638, 1679, 2120
StuI AGGCCT 1 cut(s) 991
StyD4I CCNGG 3 cut(s) 463, 991, 2305
StyI CCWWGG 2 cut(s) 183, 594
SwaI ATTTAAAT 1 cut(s) 1143
TaiI ACGT 7 cut(s) 8, 16, 382, 1003, 1778, 1927, 1973
TaqI TCGA 3 cut(s) 973, 1325, 2316
TaqII GACCGA 1 cut(s) 1581
TatI WGTACW 1 cut(s) 1036
TauI GCSGC 1 cut(s) 1332
TseFI GTSAC 1 cut(s) 1853
Tsp45I GTSAC 1 cut(s) 1853
Van91I CCANNNNNTGG 1 cut(s) 1574
Vha464I CTTAAG 1 cut(s) 1849
VpaK11BI GGWCC 2 cut(s) 461, 2263
XbaI TCTAGA 2 cut(s) 283, 1537
XceI RCATGY 1 cut(s) 503
XcmI CCANNNNNNNNNTGG 1 cut(s) 675
XmiI GTMKAC 2 cut(s) 16, 2284
XmnI GAANNNNTTC 4 cut(s) 561, 579, 1154, 2157
XspI CTAG 8 cut(s) 153, 248, 284, 849, 1538, 1638, 1679, 2120
Zsp2I ATGCAT 2 cut(s) 679, 936
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.