Rh7CG510500

resistance protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
68951642 .. 68951965
324 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG510500.1

Sequence Viewer

Length: 219 bp
ATGTATTCCAGGATAGTCGATGGGGATCAACCGATTTGTCTGAATGAAGTTGAGGACGCCGCCTCTATACGGGAGTCTAGCTGGCTTACTCAATCATTAAAATGGGAGAAATTCATTCCACCCTTGGAAGAACAATCCAGACTTGTGCTGAGAAAGAACCTTGAGTCTGTTCTTCCAAGATACCTTGAGGTCGATCCAACTGTGTTTCTCTCTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

72

Amino Acids

8.37

Weight (kDa)

4.64

Isoelectric Point (pI)

56.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 60
AclWI GGATC 2 cut(s) 33, 188
AcsI RAATTY 1 cut(s) 110
AcyI GRCGYC 1 cut(s) 57
AfiI CCNNNNNNNGG 1 cut(s) 69
AjnI CCWGG 1 cut(s) 8
AluBI AGCT 2 cut(s) 81, 216
AluI AGCT 2 cut(s) 81, 216
AlwI GGATC 2 cut(s) 33, 188
ApoI RAATTY 1 cut(s) 110
BccI CCATC 1 cut(s) 14
BciT130I CCWGG 1 cut(s) 10
BfaI CTAG 3 cut(s) 78, 213, 217
BisI GCNGC 1 cut(s) 60
BlsI GCNGC 1 cut(s) 61
Bme1390I CCNGG 1 cut(s) 10
BmrFI CCNGG 1 cut(s) 10
BpuEI CTTGAG 2 cut(s) 182, 206
BsaBI GATNNNNATC 1 cut(s) 24
BsaHI GRCGYC 1 cut(s) 57
BsaJI CCNNGG 1 cut(s) 123
Bsc4I CCNNNNNNNGG 1 cut(s) 69
Bse8I GATNNNNATC 1 cut(s) 24
BseBI CCWGG 1 cut(s) 10
BseDI CCNNGG 1 cut(s) 123
BseJI GATNNNNATC 1 cut(s) 24
BseLI CCNNNNNNNGG 1 cut(s) 69
BseMII CTCAG 1 cut(s) 140
BslI CCNNNNNNNGG 1 cut(s) 69
Bsp143I GATC 2 cut(s) 25, 193
BspACI CCGC 1 cut(s) 60
BspCNI CTCAG 1 cut(s) 141
BspPI GGATC 2 cut(s) 33, 188
BssECI CCNNGG 1 cut(s) 123
BssMI GATC 2 cut(s) 25, 193
BssNI GRCGYC 1 cut(s) 57
BssT1I CCWWGG 1 cut(s) 123
Bst2UI CCWGG 1 cut(s) 10
Bst4CI ACNGT 1 cut(s) 202
BstACI GRCGYC 1 cut(s) 57
BstC8I GCNNGC 1 cut(s) 83
BstDEI CTNAG 1 cut(s) 149
BstKTI GATC 2 cut(s) 28, 196
BstMBI GATC 2 cut(s) 25, 193
BstNI CCWGG 1 cut(s) 10
BstSCI CCNGG 1 cut(s) 8
Cac8I GCNNGC 1 cut(s) 83
CseI GACGC 1 cut(s) 65
CviJI RGCY 3 cut(s) 81, 85, 216
CviKI_1 RGCY 3 cut(s) 81, 85, 216
DdeI CTNAG 1 cut(s) 149
DpnI GATC 2 cut(s) 27, 195
DpnII GATC 2 cut(s) 25, 193
Eco130I CCWWGG 1 cut(s) 123
EcoRII CCWGG 1 cut(s) 8
EcoT14I CCWWGG 1 cut(s) 123
ErhI CCWWGG 1 cut(s) 123
FaiI YATR 1 cut(s) 68
Fnu4HI GCNGC 1 cut(s) 60
Fsp4HI GCNGC 1 cut(s) 60
FspBI CTAG 3 cut(s) 78, 213, 217
GluI GCNGC 1 cut(s) 60
HgaI GACGC 1 cut(s) 65
Hin1I GRCGYC 1 cut(s) 57
HinfI GANTC 2 cut(s) 74, 164
Hpy188I TCNGA 1 cut(s) 42
Hpy188III TCNNGA 1 cut(s) 138
HpyCH4III ACNGT 1 cut(s) 202
HpyF3I CTNAG 1 cut(s) 149
Hsp92I GRCGYC 1 cut(s) 57
Kzo9I GATC 2 cut(s) 25, 193
LpnPI CCDG 3 cut(s) 22, 67, 151
MaeI CTAG 3 cut(s) 78, 213, 217
MalI GATC 2 cut(s) 27, 195
MboI GATC 2 cut(s) 25, 193
MboII GAAGA 2 cut(s) 140, 164
MluCI AATT 1 cut(s) 110
MlyI GAGTC 2 cut(s) 83, 173
MnlI CCTC 3 cut(s) 46, 73, 181
MseI TTAA 1 cut(s) 98
MslI CAYNNNNRTG 1 cut(s) 100
MspR9I CCNGG 1 cut(s) 10
MvaI CCWGG 1 cut(s) 10
NdeII GATC 2 cut(s) 25, 193
PfoI TCCNGGA 1 cut(s) 8
PkrI GCNGC 1 cut(s) 61
PleI GAGTC 2 cut(s) 82, 172
PpsI GAGTC 2 cut(s) 82, 172
Psp6I CCWGG 1 cut(s) 8
PspGI CCWGG 1 cut(s) 8
RseI CAYNNNNRTG 1 cut(s) 100
SaqAI TTAA 1 cut(s) 98
SatI GCNGC 1 cut(s) 60
Sau3AI GATC 2 cut(s) 25, 193
SchI GAGTC 2 cut(s) 83, 173
ScrFI CCNGG 1 cut(s) 10
SetI ASST 5 cut(s) 83, 162, 186, 192, 218
SmiMI CAYNNNNRTG 1 cut(s) 100
SmlI CTYRAG 2 cut(s) 161, 185
SmoI CTYRAG 2 cut(s) 161, 185
Sse9I AATT 1 cut(s) 110
SsiI CCGC 1 cut(s) 60
SspMI CTAG 3 cut(s) 78, 213, 217
StyD4I CCNGG 1 cut(s) 8
StyI CCWWGG 1 cut(s) 123
TaaI ACNGT 1 cut(s) 202
TaqI TCGA 2 cut(s) 18, 192
TasI AATT 1 cut(s) 110
TauI GCSGC 1 cut(s) 62
Tru1I TTAA 1 cut(s) 98
Tru9I TTAA 1 cut(s) 98
TspDTI ATGAA 2 cut(s) 60, 103
XapI RAATTY 1 cut(s) 110
XspI CTAG 3 cut(s) 78, 213, 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.