Rw7G041180

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000129
Physical Location & Seq
Forward (+)
64157431 .. 64160116
2686 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G041180.1

Sequence Viewer

Length: 2001 bp
ATGCTTTCGTACTTAGACATTGGGTGTCCTGATGTTCGTATCATAGGGATTTGTGGTATGGGTGGTATCGGTAAGACAACTATTGCACAAGTGGTTTTTGAAAGGGTACAGGCCCAGTTTGAAGGTTGCAGCTTTCTTGAGAATGTTAGAGAGGTAATTGAAAAGCAAGGTGCGGTTCATTTACAAGAGCAACTTCTTTCGATTTGCTGGGAGAGGCTACATTCTAAAATGGTTCTTATCATTCTTGATGATGTGGGCCAAGAAGAACAATTGGAAGCATTGTGTGATAGGGAATTGTTTGGTCCAGGGAGTAGAATCATCATAACTACTAGAGATGAACATTTGCTCGAGGCAGTTGACGGAGATAAAGTATATAAGGTGAATCCATTAACTGATGCTGAAGCTCTTGAGCTCTTCCGTATGAAAGCCTTTAAGAAAGACCAGCCGGTTGGGGAAGATTTTCTCGAGCTATCCAAGGAATTTTTGAAATATGCTAATGGCCTTCCATTAGCTATTAAAGTTTTGGGTTCCTCTGTTCGTGGTAGATGTGTAAAATTATGGTCTAGTGCATTGGAGAGACTTAAAAAAAATCCTCCAAAAGGGATTATTGATGTTCTTAAAGTTAGTTTCGATGGATTAGAAGAAACCGAACAGGAGATATTTTTGGACATCGCATGTTTCTTTAAAGGGGGGTACATAGATCATGTAACAAGAATACTACAAGGTAGTGACCATTGTCCGGACATTGATATAGCAGTTCTCATAGAGAAATCTTTGGTAACTCTGTTTGGAAGAAAATTGGGGATGCATGACTTGGTACAAGAATTGGGTCGGGAAATTGTTCGCCAAAAATGCCGTGAAGAGCCTGAAAAACGTAGCAGGTTGTGGCTTCCCAATGAAATCATCCATGTACTTCGTCAGAGCGAGGCGATGAGTGCAATTCAAAGCATATCCCTCCAATGTCCAACGGGAGACAATGTTGGTCACTCAATTGATAATGACTTCCCAAAAATGGACAGATTGAGGTTGCTCAAGATTTGGAATTTGAAGTGTACCGGAAACATCAGATATCTTTCTAATGAGTTGCAGTATCTTGAATGGCATGAGTGTCCTTTGGTTTCTTTCCCGTCAGATTTTCAACCGGATAAACTTGTGGAAGTTCACATGTATTTCAGCCGCATCGAACAACTATGGAGGGGGGAAAAAGGATGGAGCATGCTACGACATTTAGATTTGAGTGGTTCACCATACTTGAAGTCGACTCCAGACTTCACTGAGGTTCCAGATCTTGAAAAGTTGGTGCTTCAATTTTGTACGAGCTTGGTGGAGGTTCACCCGTCTCTTGGATCTCTGAAGAAACTTGTCTCTTTGAATATGACACATTGCAAGTCTGTTGAGAGCATTCCACCTTTCACTGCCCTTGAATTCCTTCAAATATTAAGGCTTTCATCCTGTTCAGCACTGAAGAAGTTTCCAGAAATTGAAGGAAATATGAAAAGCTTGCTGGAGCTTCATTTGGATGGGACCAGCATTGAGGAATTGCCTCCATCAATTGAACGCTTGACTGGTCTGACCATGTTGAATCTAACAGACTGTAAAAACCTTTTGCATCTACCCAATACCATTGGGTGTTTGACATCTTTGAAAAGTCTCTATCTAGCAGGTTGCTCCAAAATTGATGAGATGCCTGAGAATCTGAGTGGTATTAAATGTCTGGAGAAGCTTTTCATTGGTGGAACTTGCATAAGGGAGTTATCTTTCATTGTAGGCATGAAGCATCTGCAGTATCTATCCTGCCGAGGATCTTCAATTGCTGCCCAAGAAGCTTCCGTTAAGTCTTCAATTCGTGTATGCAAAAGATTGTACTTCACTGACAGATTACCCAAATCAAATCGAAGTATTGACTCCATTGGATTCGGGAGTGACTACCGTCAATTCCCTCAATTCTTCAGCACTTGGAGTCTCAGAAATTTCCAGAAGCTGGGTGCTTCCAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

666

Amino Acids

75.38

Weight (kDa)

6.29

Isoelectric Point (pI)

43.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 11 - 147 2.6e-16 NB-ARC domain
WHD_ROQ1 PF23282 214 - 284 1.2e-18 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 456 - 597 2.7e-13 Leucine-rich repeat region
LRR_13 PF23286 476 - 561 3.5e-10 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 870, 1652
AccB7I CCANNNNNTGG 1 cut(s) 1981
AccI GTMKAC 1 cut(s) 1259
AccIII TCCGGA 1 cut(s) 739
AciI CCGC 2 cut(s) 173, 1177
AclWI GGATC 2 cut(s) 1354, 1810
AcsI RAATTY 4 cut(s) 479, 1042, 1424, 1969
AcuI CTGAAG 4 cut(s) 420, 1373, 1484, 1933
AfaI GTAC 8 cut(s) 11, 108, 695, 819, 912, 1054, 1315, 1865
AfiI CCNNNNNNNGG 5 cut(s) 599, 739, 1012, 1343, 1981
AflIII ACRYGT 1 cut(s) 1164
AjnI CCWGG 1 cut(s) 304
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 6 cut(s) 571, 966, 1344, 1369, 1655, 1967
AlwI GGATC 2 cut(s) 1354, 1810
AlwNI CAGNNNCTG 1 cut(s) 1981
Ama87I CYCGRG 2 cut(s) 347, 464
Aor13HI TCCGGA 1 cut(s) 739
AoxI GGCC 3 cut(s) 111, 256, 499
ApeKI GCWGC 2 cut(s) 129, 1814
ApoI RAATTY 4 cut(s) 479, 1042, 1424, 1969
Asp700I GAANNNNTTC 4 cut(s) 459, 840, 1428, 1724
AspS9I GGNCC 4 cut(s) 112, 256, 302, 1524
AsuHPI GGTGA 3 cut(s) 391, 1236, 1325
AvaI CYCGRG 2 cut(s) 347, 464
AvaII GGWCC 2 cut(s) 302, 1524
BanII GRGCYC 1 cut(s) 414
BbsI GAAGAC 1 cut(s) 1830
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 2 cut(s) 141, 1801
BccI CCATC 4 cut(s) 626, 1203, 1514, 1555
BceAI ACGGC 1 cut(s) 840
BciT130I CCWGG 1 cut(s) 306
BcoDI GTCTC 6 cut(s) 571, 966, 1344, 1369, 1655, 1967
BfaI CTAG 3 cut(s) 330, 564, 1658
BfmI CTRYAG 1 cut(s) 1781
BfuAI ACCTGC 2 cut(s) 870, 1652
BglII AGATCT 1 cut(s) 1285
BisI GCNGC 3 cut(s) 130, 1177, 1815
BlsI GCNGC 3 cut(s) 131, 1178, 1816
Bme1390I CCNGG 1 cut(s) 306
Bme18I GGWCC 2 cut(s) 302, 1524
BmeT110I CYCGRG 2 cut(s) 347, 464
BmgT120I GGNCC 4 cut(s) 112, 256, 302, 1524
BmiI GGNNCC 3 cut(s) 529, 1281, 1525
BmrFI CCNGG 1 cut(s) 306
BmrI ACTGGG 1 cut(s) 109
BmsI GCATC 6 cut(s) 385, 795, 1188, 1618, 1674, 1786
BmuI ACTGGG 1 cut(s) 109
BoxI GACNNNNGTC 2 cut(s) 735, 1929
BpiI GAAGAC 1 cut(s) 1830
BpmI CTGGAG 3 cut(s) 1248, 1526, 1736
BpuEI CTTGAG 3 cut(s) 158, 428, 1016
BsaJI CCNNGG 3 cut(s) 305, 474, 1798
BsaWI WCCGGW 3 cut(s) 739, 1055, 1141
BsaXI ACNNNNNCTCC 4 cut(s) 354, 384, 963, 993
Bsc4I CCNNNNNNNGG 5 cut(s) 599, 739, 1012, 1343, 1981
Bse118I RCCGGY 1 cut(s) 445
Bse1I ACTGG 2 cut(s) 115, 1570
Bse3DI GCAATG 1 cut(s) 1381
BseAI TCCGGA 1 cut(s) 739
BseBI CCWGG 1 cut(s) 306
BseDI CCNNGG 3 cut(s) 305, 474, 1798
BseGI GGATG 5 cut(s) 810, 903, 1214, 1448, 1525
BseLI CCNNNNNNNGG 5 cut(s) 599, 739, 1012, 1343, 1981
BseMI GCAATG 1 cut(s) 1381
BseMII CTCAG 4 cut(s) 1266, 1680, 1688, 1978
BseNI ACTGG 2 cut(s) 115, 1570
BseXI GCAGC 2 cut(s) 141, 1801
BseYI CCCAGC 2 cut(s) 207, 1981
BshFI GGCC 3 cut(s) 113, 258, 501
BsiHKAI GWGCWC 1 cut(s) 414
BsiHKCI CYCGRG 2 cut(s) 347, 464
BsiSI CCGG 4 cut(s) 446, 740, 1056, 1142
BslFI GGGAC 1 cut(s) 1537
BslI CCNNNNNNNGG 5 cut(s) 599, 739, 1012, 1343, 1981
BsmAI GTCTC 6 cut(s) 571, 966, 1344, 1369, 1655, 1967
BsmBI CGTCTC 1 cut(s) 1344
BsmFI GGGAC 1 cut(s) 1537
BsmI GAATGC 1 cut(s) 1401
BsnI GGCC 3 cut(s) 113, 258, 501
BsoBI CYCGRG 2 cut(s) 347, 464
Bsp1286I GDGCHC 1 cut(s) 414
Bsp13I TCCGGA 1 cut(s) 739
Bsp143I GATC 4 cut(s) 700, 1285, 1346, 1802
BspACI CCGC 2 cut(s) 173, 1177
BspANI GGCC 3 cut(s) 113, 258, 501
BspCNI CTCAG 4 cut(s) 1267, 1681, 1689, 1977
BspEI TCCGGA 1 cut(s) 739
BspLI GGNNCC 3 cut(s) 529, 1281, 1525
BspMAI CTGCAG 1 cut(s) 1785
BspMI ACCTGC 2 cut(s) 870, 1652
BspPI GGATC 2 cut(s) 1354, 1810
BspQI GCTCTTC 2 cut(s) 419, 855
BsrDI GCAATG 1 cut(s) 1381
BsrFI RCCGGY 1 cut(s) 445
BsrI ACTGG 2 cut(s) 115, 1570
BssAI RCCGGY 1 cut(s) 445
BssECI CCNNGG 3 cut(s) 305, 474, 1798
BssMI GATC 4 cut(s) 700, 1285, 1346, 1802
BssT1I CCWWGG 1 cut(s) 474
Bst2UI CCWGG 1 cut(s) 306
Bst4CI ACNGT 2 cut(s) 1595, 1931
Bst6I CTCTTC 2 cut(s) 419, 855
BstC8I GCNNGC 2 cut(s) 1217, 1502
BstDEI CTNAG 5 cut(s) 13, 1275, 1689, 1697, 1964
BstENI CCTNNNNNAGG 1 cut(s) 597
BstF5I GGATG 5 cut(s) 810, 903, 1214, 1448, 1525
BstKTI GATC 4 cut(s) 703, 1288, 1349, 1805
BstMAI GTCTC 6 cut(s) 571, 966, 1344, 1369, 1655, 1967
BstMBI GATC 4 cut(s) 700, 1285, 1346, 1802
BstMWI GCNNNNNNNGC 3 cut(s) 852, 935, 1823
BstNI CCWGG 1 cut(s) 306
BstNSI RCATGY 3 cut(s) 678, 1168, 1219
BstPAI GACNNNNGTC 2 cut(s) 735, 1929
BstSCI CCNGG 1 cut(s) 304
BstSFI CTRYAG 1 cut(s) 1781
BstV1I GCAGC 2 cut(s) 141, 1801
BstV2I GAAGAC 1 cut(s) 1830
BstX2I RGATCY 3 cut(s) 1285, 1346, 1802
BstXI CCANNNNNNTGG 1 cut(s) 449
BstYI RGATCY 3 cut(s) 1285, 1346, 1802
BsuRI GGCC 3 cut(s) 113, 258, 501
BtgZI GCGATG 2 cut(s) 655, 944
BtsCI GGATG 5 cut(s) 810, 903, 1214, 1448, 1525
BtsI GCAGTG 1 cut(s) 1413
BtsIMutI CAGTG 4 cut(s) 1272, 1413, 1460, 1869
BveI ACCTGC 2 cut(s) 870, 1652
Cac8I GCNNGC 2 cut(s) 1217, 1502
CaiI CAGNNNCTG 1 cut(s) 1981
Cfr10I RCCGGY 1 cut(s) 445
Cfr13I GGNCC 4 cut(s) 112, 256, 302, 1524
Csp6I GTAC 8 cut(s) 10, 107, 694, 818, 911, 1053, 1314, 1864
CviAII CATG 9 cut(s) 675, 704, 809, 908, 1103, 1165, 1216, 1576, 1771
CviQI GTAC 8 cut(s) 10, 107, 694, 818, 911, 1053, 1314, 1864
DdeI CTNAG 5 cut(s) 13, 1275, 1689, 1697, 1964
DpnI GATC 4 cut(s) 702, 1287, 1348, 1804
DpnII GATC 4 cut(s) 700, 1285, 1346, 1802
DraI TTTAAA 1 cut(s) 685
Eam1104I CTCTTC 2 cut(s) 419, 855
EarI CTCTTC 2 cut(s) 419, 855
Ecl136II GAGCTC 1 cut(s) 412
Eco130I CCWWGG 1 cut(s) 474
Eco24I GRGCYC 1 cut(s) 414
Eco32I GATATC 1 cut(s) 1070
Eco47I GGWCC 2 cut(s) 302, 1524
Eco53kI GAGCTC 1 cut(s) 412
Eco57I CTGAAG 4 cut(s) 420, 1373, 1484, 1933
Eco88I CYCGRG 2 cut(s) 347, 464
EcoICRI GAGCTC 1 cut(s) 412
EcoNI CCTNNNNNAGG 1 cut(s) 597
EcoRI GAATTC 1 cut(s) 1424
EcoRII CCWGG 1 cut(s) 304
EcoRV GATATC 1 cut(s) 1070
EcoT14I CCWWGG 1 cut(s) 474
EcoT22I ATGCAT 1 cut(s) 810
EcoT38I GRGCYC 1 cut(s) 414
ErhI CCWWGG 1 cut(s) 474
Esp3I CGTCTC 1 cut(s) 1344
FaeI CATG 9 cut(s) 678, 707, 812, 911, 1106, 1168, 1219, 1579, 1774
FalI AAGNNNNNCTT 2 cut(s) 177, 209
FaqI GGGAC 1 cut(s) 1537
FatI CATG 9 cut(s) 674, 703, 808, 907, 1102, 1164, 1215, 1575, 1770
FblI GTMKAC 1 cut(s) 1259
Fnu4HI GCNGC 3 cut(s) 130, 1177, 1815
FokI GGATG 5 cut(s) 817, 890, 1221, 1435, 1532
FriOI GRGCYC 1 cut(s) 414
Fsp4HI GCNGC 3 cut(s) 130, 1177, 1815
FspBI CTAG 3 cut(s) 330, 564, 1658
GluI GCNGC 3 cut(s) 130, 1177, 1815
GsaI CCCAGC 2 cut(s) 211, 1985
GsuI CTGGAG 3 cut(s) 1248, 1526, 1736
HaeIII GGCC 3 cut(s) 113, 258, 501
HapII CCGG 4 cut(s) 446, 740, 1056, 1142
Hin1II CATG 9 cut(s) 678, 707, 812, 911, 1106, 1168, 1219, 1579, 1774
HincII GTYRAC 2 cut(s) 358, 1260
HindII GTYRAC 2 cut(s) 358, 1260
HindIII AAGCTT 3 cut(s) 1498, 1721, 1824
HinfI GANTC 8 cut(s) 315, 382, 1261, 1582, 1693, 1904, 1914, 1960
HpaII CCGG 4 cut(s) 446, 740, 1056, 1142
HphI GGTGA 3 cut(s) 391, 1236, 1325
Hpy166II GTNNAC 6 cut(s) 358, 1053, 1162, 1244, 1260, 1333
Hpy188I TCNGA 7 cut(s) 921, 1067, 1132, 1353, 1572, 1698, 1967
Hpy8I GTNNAC 6 cut(s) 358, 1053, 1162, 1244, 1260, 1333
HpyAV CCTTC 4 cut(s) 116, 512, 1439, 1478
HpyCH4III ACNGT 2 cut(s) 1595, 1931
HpyCH4IV ACGT 1 cut(s) 874
HpyF10VI GCNNNNNNNGC 3 cut(s) 852, 935, 1823
HpyF3I CTNAG 5 cut(s) 13, 1275, 1689, 1697, 1964
HpySE526I ACGT 1 cut(s) 874
Hsp92II CATG 9 cut(s) 678, 707, 812, 911, 1106, 1168, 1219, 1579, 1774
Kpn2I TCCGGA 1 cut(s) 739
Kzo9I GATC 4 cut(s) 700, 1285, 1346, 1802
LguI GCTCTTC 2 cut(s) 419, 855
LmnI GCTCC 3 cut(s) 1212, 1507, 1673
Lsp1109I GCAGC 2 cut(s) 141, 1801
LweI GCATC 6 cut(s) 385, 795, 1188, 1618, 1674, 1786
MaeI CTAG 3 cut(s) 330, 564, 1658
MaeII ACGT 1 cut(s) 874
MaeIII GTNAC 5 cut(s) 706, 728, 778, 983, 1922
MalI GATC 4 cut(s) 702, 1287, 1348, 1804
MboI GATC 4 cut(s) 700, 1285, 1346, 1802
MfeI CAATTG 4 cut(s) 269, 990, 1551, 1809
MflI RGATCY 3 cut(s) 1285, 1346, 1802
MhlI GDGCHC 1 cut(s) 414
MlyI GAGTC 3 cut(s) 1255, 1898, 1969
MmeI TCCRAC 1 cut(s) 989
Mph1103I ATGCAT 1 cut(s) 810
MroI TCCGGA 1 cut(s) 739
MroXI GAANNNNTTC 4 cut(s) 459, 840, 1428, 1724
MseI TTAA 9 cut(s) 389, 432, 516, 582, 618, 684, 1439, 1707, 1833
MslI CAYNNNNRTG 1 cut(s) 1518
MspI CCGG 4 cut(s) 446, 740, 1056, 1142
MspR9I CCNGG 1 cut(s) 306
MunI CAATTG 4 cut(s) 269, 990, 1551, 1809
Mva1269I GAATGC 1 cut(s) 1401
MvaI CCWGG 1 cut(s) 306
MwoI GCNNNNNNNGC 3 cut(s) 852, 935, 1823
NdeII GATC 4 cut(s) 700, 1285, 1346, 1802
NlaIII CATG 9 cut(s) 678, 707, 812, 911, 1106, 1168, 1219, 1579, 1774
NlaIV GGNNCC 3 cut(s) 529, 1281, 1525
NmeAIII GCCGAG 1 cut(s) 1823
NmuCI GTSAC 3 cut(s) 728, 983, 1922
NsiI ATGCAT 1 cut(s) 810
NspI RCATGY 3 cut(s) 678, 1168, 1219
PaeI GCATGC 1 cut(s) 1219
PaeR7I CTCGAG 2 cut(s) 347, 464
PciI ACATGT 1 cut(s) 1164
PciSI GCTCTTC 2 cut(s) 419, 855
PctI GAATGC 1 cut(s) 1401
PdmI GAANNNNTTC 4 cut(s) 459, 840, 1428, 1724
PfeI GAWTC 5 cut(s) 315, 382, 1582, 1693, 1914
PflMI CCANNNNNTGG 1 cut(s) 1981
PkrI GCNGC 3 cut(s) 131, 1178, 1816
PleI GAGTC 3 cut(s) 1255, 1898, 1968
PpsI GAGTC 3 cut(s) 1255, 1898, 1968
PscI ACATGT 1 cut(s) 1164
PshAI GACNNNNGTC 2 cut(s) 735, 1929
Psp124BI GAGCTC 1 cut(s) 414
Psp6I CCWGG 1 cut(s) 304
PspFI CCCAGC 2 cut(s) 207, 1981
PspGI CCWGG 1 cut(s) 304
PspN4I GGNNCC 3 cut(s) 529, 1281, 1525
PspPI GGNCC 4 cut(s) 112, 256, 302, 1524
PspXI VCTCGAGB 1 cut(s) 347
PstI CTGCAG 1 cut(s) 1785
PstNI CAGNNNCTG 1 cut(s) 1981
PsuI RGATCY 3 cut(s) 1285, 1346, 1802
RsaI GTAC 8 cut(s) 11, 108, 695, 819, 912, 1054, 1315, 1865
RsaNI GTAC 8 cut(s) 10, 107, 694, 818, 911, 1053, 1314, 1864
RseI CAYNNNNRTG 1 cut(s) 1518
SacI GAGCTC 1 cut(s) 414
SalI GTCGAC 1 cut(s) 1258
SapI GCTCTTC 2 cut(s) 419, 855
SaqAI TTAA 9 cut(s) 389, 432, 516, 582, 618, 684, 1439, 1707, 1833
SatI GCNGC 3 cut(s) 130, 1177, 1815
Sau3AI GATC 4 cut(s) 700, 1285, 1346, 1802
Sau96I GGNCC 4 cut(s) 112, 256, 302, 1524
SchI GAGTC 3 cut(s) 1255, 1898, 1969
ScrFI CCNGG 1 cut(s) 306
SduI GDGCHC 1 cut(s) 414
SfaNI GCATC 6 cut(s) 385, 795, 1188, 1618, 1674, 1786
SfcI CTRYAG 1 cut(s) 1781
Sfr274I CTCGAG 2 cut(s) 347, 464
SinI GGWCC 2 cut(s) 302, 1524
SlaI CTCGAG 2 cut(s) 347, 464
SmiMI CAYNNNNRTG 1 cut(s) 1518
SmlI CTYRAG 5 cut(s) 137, 347, 407, 464, 1031
SmoI CTYRAG 5 cut(s) 137, 347, 407, 464, 1031
SphI GCATGC 1 cut(s) 1219
SsiI CCGC 2 cut(s) 173, 1177
SspI AATATT 1 cut(s) 1437
SspMI CTAG 3 cut(s) 330, 564, 1658
SstI GAGCTC 1 cut(s) 414
StyD4I CCNGG 1 cut(s) 304
StyI CCWWGG 1 cut(s) 474
TaaI ACNGT 2 cut(s) 1595, 1931
TaiI ACGT 1 cut(s) 877
TaqI TCGA 7 cut(s) 200, 348, 465, 630, 1182, 1259, 1894
TatI WGTACW 2 cut(s) 910, 1863
TauI GCSGC 1 cut(s) 1179
TfiI GAWTC 5 cut(s) 315, 382, 1582, 1693, 1914
Tru1I TTAA 9 cut(s) 389, 432, 516, 582, 618, 684, 1439, 1707, 1833
Tru9I TTAA 9 cut(s) 389, 432, 516, 582, 618, 684, 1439, 1707, 1833
TscAI CASTG 4 cut(s) 1279, 1420, 1467, 1876
TseFI GTSAC 3 cut(s) 728, 983, 1922
TseI GCWGC 2 cut(s) 129, 1814
Tsp45I GTSAC 3 cut(s) 728, 983, 1922
TspGWI ACGGA 3 cut(s) 375, 407, 1819
TspRI CASTG 4 cut(s) 1279, 1420, 1467, 1876
Van91I CCANNNNNTGG 1 cut(s) 1981
VpaK11BI GGWCC 2 cut(s) 302, 1524
XagI CCTNNNNNAGG 1 cut(s) 597
XapI RAATTY 4 cut(s) 479, 1042, 1424, 1969
XceI RCATGY 3 cut(s) 678, 1168, 1219
XhoI CTCGAG 2 cut(s) 347, 464
XmiI GTMKAC 1 cut(s) 1259
XmnI GAANNNNTTC 4 cut(s) 459, 840, 1428, 1724
XspI CTAG 3 cut(s) 330, 564, 1658
Zsp2I ATGCAT 1 cut(s) 810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.