Rh7BG464500

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000129
Physical Location & Seq
Forward (+)
55006436 .. 55008814
2379 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG464500.1

Sequence Viewer

Length: 1995 bp
ATGGCTAATTTAAGAGATGAGTGGGAATCTACAGACCTGTGTTCCACAATGTTTACTAATCCAGAAAATGTGGGGGACTCTTTCCAACTGCGTGTGACATGTAAGCATACAGAGGGGAAACAAGTTGATCATTTGCCAGTGACAACTCTAGCGTCTATAAAACAAATGCCTTTCGAGTCAGATATAAGGATCGTACATCCTGGAGATGAAATTCCAAAGTGGTTCAGCACTATATCTACCAGAAATCCCATATCAATCTCGATACCTCAAAATCTGGCCGATGATAACATGTGGAGGGGATTTGCCGCGTGTGCTATATTCTCAGTCACGGGGCATACTGCTCTCTCTGTTATTGAACCGGATCCTGATTTTCTTAATTACTCGTATCAAATCACATTGGAAACTGATGTTATGCATCTGGAACCATTTCGGGTGTTGGGAGTGGATTTAGGCGGCTGCCGCGGCTCTGAATCAAGTTCTCATCTGGTTGTGATTTTCGGTATATCTAGTTCGAAGTTTCCACAGAGGGGGTTAAATCAATCAACTGTGGTGAGGGCTATATTTGAAACTACCCATCCATCCATGGTGGTCCAGAAATGTGGAATTCGCCTACTCTATGAGCAAGATGCTGGATGGCATATCAGAATAGCCGGGGGCGACGATCATCCGATTTGTCTGAATAAAGTTGAGGACGCCGCCTCTGTACCGCAGTCTGCCTGCTGGCTTAATCAATCTTTGGAATGGGAGAAATTCATACCACCCTTGGAAGAAGAATCCACACTTGTGCTGATAAAGAACCTTCAGTCTGTTCTTCCAAGATACCTTGAGGCACTAAACAGTTATTCTAAAACGTTCGAATTTAACCTCGGAGGAAGCCCAGGGTGGTTTCATGACTCTGCCTTTGGTACGAGGTCACAGGTGGCCGGAATGTCAATTGGGCTACCTCAAAATCTACACAAAAGCAAGAAGTGGATGGGATTTGCAATATACGCATCGCTTGTAGAGGAAGTGGGCCAGACAATGAAAGAGGACAACTATCGGGTATTGGTTACACTAATAAGCGGGGATAAATTATTTCCGGTTGTGGGCCTAGGACTTGAGCACGTTTGGCCATTGTCAGAAGAACCTCATCAACTATTGGTTTTTTACATACCGCGGCCACAGATTCCCGAAGTGTTCACTCAGACATTAACAACTGCAATGGACTTTTACATCTTGATCAATGGTAGCCCTCATGTAAAGGCTCAAAGATGTGGGTTCCGTATTGTGTACCAGGAAGATATACAAGAGTTTGCTGATACTATCATCCAGTGCATGCAGAGGGAAAATTCTCTTGAATCTCACGATAAGTTGGTGGTAGAAGCATGGATAGAGTTGATACGATTGCAAGGTGCCCATATAGAGGGAATGAAAGAACGGGATTCCAGAACCCCACGGGAAAAATACTTTGAATTGCACTCACGAAAATATAGAAATTGGGACTGGTCTGACCCTCGTCCTGCTTTTTGTGTCTTCGAGAGAGTTGAAATCTCCAAGTTCAAATGGTTCATGCCTTTCATCAACCAAGGCAACTCTGCAGAAACCCAACTTCCTCTGAATGTGTTCAATGATGATAATTGGTTGGGGTTTGCCGTATGTTCTCGGTTGTCCCACGACCAATATCCAAACATTAGTCTTGGGAATACTGCTTCTGATTCAGAGGATATTATGCTTATTTGCCGTCTGGATTCTGACGTTTCTTGGCAGGGCTTATTTAATTTCCGGATGCATTTAGGTTTAAAGATTCGAGAGCCATCAGAATACAATGCGACTTGTTTCTTTTATATACCGCGCACTAAAGTTCGGAGTCAGGTTTGGAGGCAATGCAAATTGGCCAGGATAACTATGTGGTTTTCTACCCCATGCTTAGCAGTGCTTAGTTGTGCCCTTCGTCTACTATTTAAGGAGGACGTTGAACATCTTGTAGAAACACTGACCCTCGCCGAATTACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

664

Amino Acids

75.84

Weight (kDa)

5.5

Isoelectric Point (pI)

44.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 66 - 210 1.3e-10 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1391
AccI GTMKAC 1 cut(s) 1933
AccII CGCG 4 cut(s) 308, 462, 1156, 1831
AccIII TCCGGA 1 cut(s) 1761
AclI AACGTT 1 cut(s) 851
AclWI GGATC 3 cut(s) 197, 356, 369
AcoI YGGCCR 5 cut(s) 276, 921, 1109, 1157, 1872
AcsI RAATTY 5 cut(s) 210, 603, 749, 857, 1327
AcuI CTGAAG 1 cut(s) 785
AcyI GRCGYC 1 cut(s) 693
AfaI GTAC 4 cut(s) 195, 705, 907, 1271
AfiI CCNNNNNNNGG 3 cut(s) 527, 1085, 1402
AflIII ACRYGT 2 cut(s) 98, 288
AgsI TTSAA 8 cut(s) 356, 566, 1337, 1451, 1526, 1540, 1606, 1955
AjnI CCWGG 4 cut(s) 199, 877, 1272, 1874
AleI CACNNNNGTG 1 cut(s) 782
Alw21I GWGCWC 1 cut(s) 1104
AlwI GGATC 3 cut(s) 197, 356, 369
Aor13HI TCCGGA 1 cut(s) 1761
AoxI GGCC 7 cut(s) 276, 921, 1012, 1087, 1109, 1157, 1872
ApeKI GCWGC 1 cut(s) 456
ApoI RAATTY 5 cut(s) 210, 603, 749, 857, 1327
ArsI GACNNNNNNTTYG 2 cut(s) 884, 916
Asp700I GAANNNNTTC 2 cut(s) 426, 1601
AspA2I CCTAGG 1 cut(s) 1090
AspLEI GCGC 1 cut(s) 1833
AspS9I GGNCC 3 cut(s) 589, 1012, 1087
AsuC2I CCSGG 1 cut(s) 652
AsuHPI GGTGA 1 cut(s) 562
AsuII TTCGAA 2 cut(s) 512, 855
AvaII GGWCC 1 cut(s) 589
AvrII CCTAGG 1 cut(s) 1090
BaeGI GKGCMC 2 cut(s) 1396, 1927
BalI TGGCCA 2 cut(s) 1111, 1874
BamHI GGATCC 1 cut(s) 361
BanI GGYRCC 1 cut(s) 1391
BbsI GAAGAC 1 cut(s) 1504
Bbv12I GWGCWC 1 cut(s) 1104
BbvI GCAGC 1 cut(s) 443
BccI CCATC 5 cut(s) 582, 586, 627, 967, 1801
BceAI ACGGC 2 cut(s) 1616, 1704
BciT130I CCWGG 4 cut(s) 201, 879, 1274, 1876
BclI TGATCA 2 cut(s) 127, 1218
BcnI CCSGG 1 cut(s) 652
BfaI CTAG 3 cut(s) 149, 507, 1091
BfmI CTRYAG 2 cut(s) 30, 1575
BisI GCNGC 7 cut(s) 306, 454, 457, 460, 463, 696, 1157
BlnI CCTAGG 1 cut(s) 1090
BlpI GCTNAGC 1 cut(s) 1906
BlsI GCNGC 7 cut(s) 307, 455, 458, 461, 464, 697, 1158
Bme1390I CCNGG 5 cut(s) 201, 652, 879, 1274, 1876
Bme18I GGWCC 1 cut(s) 589
BmgT120I GGNCC 3 cut(s) 589, 1012, 1087
BmiI GGNNCC 4 cut(s) 363, 423, 1259, 1393
BmrFI CCNGG 5 cut(s) 201, 652, 879, 1274, 1876
BmsI GCATC 4 cut(s) 424, 616, 1001, 1755
BoxI GACNNNNGTC 1 cut(s) 1494
BpiI GAAGAC 1 cut(s) 1504
BpmI CTGGAG 1 cut(s) 222
Bpu1102I GCTNAGC 1 cut(s) 1906
Bpu14I TTCGAA 2 cut(s) 512, 855
BpuEI CTTGAG 2 cut(s) 845, 1118
BpuMI CCSGG 1 cut(s) 652
BsaHI GRCGYC 1 cut(s) 693
BsaWI WCCGGW 3 cut(s) 358, 1078, 1761
Bsc4I CCNNNNNNNGG 3 cut(s) 527, 1085, 1402
Bse1I ACTGG 3 cut(s) 137, 1309, 1487
Bse3DI GCAATG 2 cut(s) 1206, 1868
BseAI TCCGGA 1 cut(s) 1761
BseBI CCWGG 4 cut(s) 201, 879, 1274, 1876
BseGI GGATG 8 cut(s) 196, 574, 578, 638, 664, 978, 1305, 1770
BseLI CCNNNNNNNGG 3 cut(s) 527, 1085, 1402
BseMI GCAATG 2 cut(s) 1206, 1868
BseMII CTCAG 2 cut(s) 336, 1196
BseNI ACTGG 3 cut(s) 137, 1309, 1487
BseSI GKGCMC 2 cut(s) 1396, 1927
BseXI GCAGC 1 cut(s) 443
Bsh1236I CGCG 4 cut(s) 308, 462, 1156, 1831
BshFI GGCC 7 cut(s) 278, 923, 1014, 1089, 1111, 1159, 1874
BshNI GGYRCC 1 cut(s) 1391
BsiHKAI GWGCWC 1 cut(s) 1104
BsiSI CCGG 5 cut(s) 359, 651, 924, 1079, 1762
BslFI GGGAC 3 cut(s) 89, 1493, 1633
BslI CCNNNNNNNGG 3 cut(s) 527, 1085, 1402
BsmFI GGGAC 3 cut(s) 89, 1493, 1633
BsnI GGCC 7 cut(s) 278, 923, 1014, 1089, 1111, 1159, 1874
Bsp119I TTCGAA 2 cut(s) 512, 855
Bsp1286I GDGCHC 3 cut(s) 1104, 1396, 1927
Bsp13I TCCGGA 1 cut(s) 1761
Bsp143I GATC 5 cut(s) 127, 189, 361, 661, 1218
Bsp1720I GCTNAGC 1 cut(s) 1906
Bsp19I CCATGG 1 cut(s) 582
BspANI GGCC 7 cut(s) 278, 923, 1014, 1089, 1111, 1159, 1874
BspCNI CTCAG 2 cut(s) 335, 1195
BspEI TCCGGA 1 cut(s) 1761
BspFNI CGCG 4 cut(s) 308, 462, 1156, 1831
BspHI TCATGA 1 cut(s) 889
BspLI GGNNCC 4 cut(s) 363, 423, 1259, 1393
BspMAI CTGCAG 1 cut(s) 1579
BspPI GGATC 3 cut(s) 197, 356, 369
BspT104I TTCGAA 2 cut(s) 512, 855
BspT107I GGYRCC 1 cut(s) 1391
BsrDI GCAATG 2 cut(s) 1206, 1868
BsrI ACTGG 3 cut(s) 137, 1309, 1487
BssMI GATC 5 cut(s) 127, 189, 361, 661, 1218
BssNI GRCGYC 1 cut(s) 693
BssT1I CCWWGG 4 cut(s) 582, 762, 1090, 1564
Bst2UI CCWGG 4 cut(s) 201, 879, 1274, 1876
Bst4CI ACNGT 2 cut(s) 547, 839
BstACI GRCGYC 1 cut(s) 693
BstBI TTCGAA 2 cut(s) 512, 855
BstC8I GCNNGC 3 cut(s) 718, 722, 1316
BstDEI CTNAG 4 cut(s) 322, 1182, 1906, 1916
BstDSI CCRYGG 4 cut(s) 460, 582, 1154, 1433
BstF5I GGATG 8 cut(s) 196, 574, 578, 638, 664, 978, 1305, 1770
BstFNI CGCG 4 cut(s) 308, 462, 1156, 1831
BstHHI GCGC 1 cut(s) 1833
BstKTI GATC 5 cut(s) 130, 192, 364, 664, 1221
BstMBI GATC 5 cut(s) 127, 189, 361, 661, 1218
BstMWI GCNNNNNNNGC 5 cut(s) 311, 459, 462, 989, 1108
BstNI CCWGG 4 cut(s) 201, 879, 1274, 1876
BstNSI RCATGY 3 cut(s) 102, 292, 1318
BstPAI GACNNNNGTC 1 cut(s) 1494
BstSCI CCNGG 5 cut(s) 199, 650, 877, 1272, 1874
BstSFI CTRYAG 2 cut(s) 30, 1575
BstSLI GKGCMC 2 cut(s) 1396, 1927
BstUI CGCG 4 cut(s) 308, 462, 1156, 1831
BstV1I GCAGC 1 cut(s) 443
BstV2I GAAGAC 1 cut(s) 1504
BstX2I RGATCY 1 cut(s) 361
BstXI CCANNNNNNTGG 1 cut(s) 599
BstYI RGATCY 1 cut(s) 361
BsuRI GGCC 7 cut(s) 278, 923, 1014, 1089, 1111, 1159, 1874
BtgI CCRYGG 4 cut(s) 460, 582, 1154, 1433
BtgZI GCGATG 1 cut(s) 978
BtsCI GGATG 8 cut(s) 196, 574, 578, 638, 664, 978, 1305, 1770
BtsI GCAGTG 1 cut(s) 1917
BtsIMutI CAGTG 4 cut(s) 144, 1316, 1917, 1970
Cac8I GCNNGC 3 cut(s) 718, 722, 1316
CciI TCATGA 1 cut(s) 889
CfoI GCGC 1 cut(s) 1833
Cfr13I GGNCC 3 cut(s) 589, 1012, 1087
Cfr42I CCGCGG 2 cut(s) 463, 1157
CseI GACGC 2 cut(s) 141, 701
Csp6I GTAC 4 cut(s) 194, 704, 906, 1270
CviAII CATG 9 cut(s) 99, 289, 583, 890, 1235, 1315, 1365, 1549, 1902
CviQI GTAC 4 cut(s) 194, 704, 906, 1270
DdeI CTNAG 4 cut(s) 322, 1182, 1906, 1916
DpnI GATC 5 cut(s) 129, 191, 363, 663, 1220
DpnII GATC 5 cut(s) 127, 189, 361, 661, 1218
DraI TTTAAA 1 cut(s) 1779
EaeI YGGCCR 5 cut(s) 276, 921, 1109, 1157, 1872
Eco130I CCWWGG 4 cut(s) 582, 762, 1090, 1564
Eco47I GGWCC 1 cut(s) 589
Eco57I CTGAAG 1 cut(s) 785
EcoRI GAATTC 1 cut(s) 603
EcoRII CCWGG 4 cut(s) 199, 877, 1272, 1874
EcoT14I CCWWGG 4 cut(s) 582, 762, 1090, 1564
EcoT22I ATGCAT 2 cut(s) 417, 1770
ErhI CCWWGG 4 cut(s) 582, 762, 1090, 1564
FaeI CATG 9 cut(s) 102, 292, 586, 893, 1238, 1318, 1368, 1552, 1905
FaqI GGGAC 3 cut(s) 89, 1493, 1633
FatI CATG 9 cut(s) 98, 288, 582, 889, 1234, 1314, 1364, 1548, 1901
FauI CCCGC 1 cut(s) 1055
FbaI TGATCA 2 cut(s) 127, 1218
FblI GTMKAC 1 cut(s) 1933
Fnu4HI GCNGC 7 cut(s) 306, 454, 457, 460, 463, 696, 1157
FokI GGATG 8 cut(s) 183, 561, 565, 645, 651, 985, 1292, 1777
Fsp4HI GCNGC 7 cut(s) 306, 454, 457, 460, 463, 696, 1157
FspBI CTAG 3 cut(s) 149, 507, 1091
GlaI GCGC 1 cut(s) 1832
GluI GCNGC 7 cut(s) 306, 454, 457, 460, 463, 696, 1157
GsuI CTGGAG 1 cut(s) 222
HaeIII GGCC 7 cut(s) 278, 923, 1014, 1089, 1111, 1159, 1874
HapII CCGG 5 cut(s) 359, 651, 924, 1079, 1762
HgaI GACGC 2 cut(s) 141, 701
HhaI GCGC 1 cut(s) 1833
Hin1I GRCGYC 1 cut(s) 693
Hin1II CATG 9 cut(s) 102, 292, 586, 893, 1238, 1318, 1368, 1552, 1905
Hin6I GCGC 1 cut(s) 1831
HinP1I GCGC 1 cut(s) 1831
HpaII CCGG 5 cut(s) 359, 651, 924, 1079, 1762
HphI GGTGA 1 cut(s) 562
Hpy166II GTNNAC 4 cut(s) 54, 1179, 1270, 1934
Hpy8I GTNNAC 4 cut(s) 54, 1179, 1270, 1934
Hpy99I CGWCG 1 cut(s) 662
HpyAV CCTTC 2 cut(s) 809, 1937
HpyCH4III ACNGT 2 cut(s) 547, 839
HpyCH4IV ACGT 4 cut(s) 851, 1104, 1734, 1950
HpyF10VI GCNNNNNNNGC 5 cut(s) 311, 459, 462, 989, 1108
HpyF3I CTNAG 4 cut(s) 322, 1182, 1906, 1916
HpySE526I ACGT 4 cut(s) 851, 1104, 1734, 1950
Hsp92I GRCGYC 1 cut(s) 693
Hsp92II CATG 9 cut(s) 102, 292, 586, 893, 1238, 1318, 1368, 1552, 1905
HspAI GCGC 1 cut(s) 1831
Kpn2I TCCGGA 1 cut(s) 1761
Ksp22I TGATCA 2 cut(s) 127, 1218
KspI CCGCGG 2 cut(s) 463, 1157
Kzo9I GATC 5 cut(s) 127, 189, 361, 661, 1218
Lsp1109I GCAGC 1 cut(s) 443
LweI GCATC 4 cut(s) 424, 616, 1001, 1755
MaeI CTAG 3 cut(s) 149, 507, 1091
MaeII ACGT 4 cut(s) 851, 1104, 1734, 1950
MaeIII GTNAC 5 cut(s) 94, 139, 325, 912, 1048
MalI GATC 5 cut(s) 129, 191, 363, 663, 1220
MboI GATC 5 cut(s) 127, 189, 361, 661, 1218
MboII GAAGA 6 cut(s) 779, 782, 803, 1133, 1289, 1504
MfeI CAATTG 1 cut(s) 933
MflI RGATCY 1 cut(s) 361
MhlI GDGCHC 3 cut(s) 1104, 1396, 1927
MlsI TGGCCA 2 cut(s) 1111, 1874
MluNI TGGCCA 2 cut(s) 1111, 1874
MlyI GAGTC 4 cut(s) 71, 185, 887, 1855
MmeI TCCRAC 1 cut(s) 109
Mox20I TGGCCA 2 cut(s) 1111, 1874
Mph1103I ATGCAT 2 cut(s) 417, 1770
MroI TCCGGA 1 cut(s) 1761
MroXI GAANNNNTTC 2 cut(s) 426, 1601
MscI TGGCCA 2 cut(s) 1111, 1874
MseI TTAA 9 cut(s) 11, 375, 533, 726, 861, 1190, 1755, 1778, 1941
MslI CAYNNNNRTG 1 cut(s) 782
Msp20I TGGCCA 2 cut(s) 1111, 1874
MspA1I CMGCKG 2 cut(s) 462, 1156
MspI CCGG 5 cut(s) 359, 651, 924, 1079, 1762
MspR9I CCNGG 5 cut(s) 201, 652, 879, 1274, 1876
MunI CAATTG 1 cut(s) 933
MvaI CCWGG 4 cut(s) 201, 879, 1274, 1876
MvnI CGCG 4 cut(s) 308, 462, 1156, 1831
MwoI GCNNNNNNNGC 5 cut(s) 311, 459, 462, 989, 1108
NciI CCSGG 1 cut(s) 652
NcoI CCATGG 1 cut(s) 582
NdeII GATC 5 cut(s) 127, 189, 361, 661, 1218
NlaIII CATG 9 cut(s) 102, 292, 586, 893, 1238, 1318, 1368, 1552, 1905
NlaIV GGNNCC 4 cut(s) 363, 423, 1259, 1393
NmuCI GTSAC 4 cut(s) 94, 139, 325, 912
NsiI ATGCAT 2 cut(s) 417, 1770
NspI RCATGY 3 cut(s) 102, 292, 1318
NspV TTCGAA 2 cut(s) 512, 855
OliI CACNNNNGTG 1 cut(s) 782
PaeI GCATGC 1 cut(s) 1318
PagI TCATGA 1 cut(s) 889
PasI CCCWGGG 1 cut(s) 878
PciI ACATGT 2 cut(s) 98, 288
PdmI GAANNNNTTC 2 cut(s) 426, 1601
PfeI GAWTC 9 cut(s) 26, 470, 773, 1165, 1337, 1421, 1694, 1727, 1783
PfoI TCCNGGA 1 cut(s) 199
PkrI GCNGC 7 cut(s) 307, 455, 458, 461, 464, 697, 1158
PleI GAGTC 4 cut(s) 71, 184, 887, 1854
PpsI GAGTC 4 cut(s) 71, 184, 887, 1854
PscI ACATGT 2 cut(s) 98, 288
PshAI GACNNNNGTC 1 cut(s) 1494
Psp1406I AACGTT 1 cut(s) 851
Psp6I CCWGG 4 cut(s) 199, 877, 1272, 1874
PspGI CCWGG 4 cut(s) 199, 877, 1272, 1874
PspN4I GGNNCC 4 cut(s) 363, 423, 1259, 1393
PspPI GGNCC 3 cut(s) 589, 1012, 1087
PsrI GAACNNNNNNTAC 2 cut(s) 493, 525
PstI CTGCAG 1 cut(s) 1579
PsuI RGATCY 1 cut(s) 361
RsaI GTAC 4 cut(s) 195, 705, 907, 1271
RsaNI GTAC 4 cut(s) 194, 704, 906, 1270
RseI CAYNNNNRTG 1 cut(s) 782
SacII CCGCGG 2 cut(s) 463, 1157
SaqAI TTAA 9 cut(s) 11, 375, 533, 726, 861, 1190, 1755, 1778, 1941
SatI GCNGC 7 cut(s) 306, 454, 457, 460, 463, 696, 1157
Sau3AI GATC 5 cut(s) 127, 189, 361, 661, 1218
Sau96I GGNCC 3 cut(s) 589, 1012, 1087
SchI GAGTC 4 cut(s) 71, 185, 887, 1855
ScrFI CCNGG 5 cut(s) 201, 652, 879, 1274, 1876
SduI GDGCHC 3 cut(s) 1104, 1396, 1927
SfaNI GCATC 4 cut(s) 424, 616, 1001, 1755
SfcI CTRYAG 2 cut(s) 30, 1575
Sfr303I CCGCGG 2 cut(s) 463, 1157
SfuI TTCGAA 2 cut(s) 512, 855
SgrBI CCGCGG 2 cut(s) 463, 1157
SinI GGWCC 1 cut(s) 589
SmiMI CAYNNNNRTG 1 cut(s) 782
SmlI CTYRAG 2 cut(s) 824, 1097
SmoI CTYRAG 2 cut(s) 824, 1097
SphI GCATGC 1 cut(s) 1318
SspMI CTAG 3 cut(s) 149, 507, 1091
StyD4I CCNGG 5 cut(s) 199, 650, 877, 1272, 1874
StyI CCWWGG 4 cut(s) 582, 762, 1090, 1564
TaaI ACNGT 2 cut(s) 547, 839
TaiI ACGT 4 cut(s) 854, 1107, 1737, 1953
TaqI TCGA 6 cut(s) 174, 260, 512, 855, 1515, 1786
TauI GCSGC 6 cut(s) 308, 456, 462, 465, 698, 1159
TfiI GAWTC 9 cut(s) 26, 470, 773, 1165, 1337, 1421, 1694, 1727, 1783
Tru1I TTAA 9 cut(s) 11, 375, 533, 726, 861, 1190, 1755, 1778, 1941
Tru9I TTAA 9 cut(s) 11, 375, 533, 726, 861, 1190, 1755, 1778, 1941
TscAI CASTG 4 cut(s) 144, 1316, 1917, 1977
TseFI GTSAC 4 cut(s) 94, 139, 325, 912
TseI GCWGC 1 cut(s) 456
Tsp45I GTSAC 4 cut(s) 94, 139, 325, 912
TspDTI ATGAA 7 cut(s) 222, 742, 878, 1037, 1424, 1537, 1546
TspGWI ACGGA 1 cut(s) 1250
TspRI CASTG 4 cut(s) 144, 1316, 1917, 1977
VpaK11BI GGWCC 1 cut(s) 589
XapI RAATTY 5 cut(s) 210, 603, 749, 857, 1327
XceI RCATGY 3 cut(s) 102, 292, 1318
XmaJI CCTAGG 1 cut(s) 1090
XmiI GTMKAC 1 cut(s) 1933
XmnI GAANNNNTTC 2 cut(s) 426, 1601
XspI CTAG 3 cut(s) 149, 507, 1091
Zsp2I ATGCAT 2 cut(s) 417, 1770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.