RH7CG508900

resistance protein

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0000129
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG508900.1

Sequence Viewer

Length: 1869 bp
ATGCCTTTCTCTGCAAATTTCAGGGGCATATATCCTACAGATGAAATTCCAGAGTGGTTCAGCACTATAGCTTCCAGAAATCCCATATCAATCTCGATACCTCAAAATCTGGCCGATGATAACAACTGGAAGGGAGTTGCCGCGTGTGCTATATTCTCAGTTAAGGGGCATACTGCTCTCTCTCTTATTGAACCGGATCCTGATTTTTCTAATTACTCGTATCAAGTCACAATCGAAACTGATGTTGTGCGTCTGGAACCAGATGTGTTGGGAGTGGAATCAGTGGATTCAGTGGAATTAGGCTGCTATGGATTAAGTTCTCATCTGCTTGTGGTTTTCCATATAAAAAGTTTGAAGTTTCCACAGAGGGGGTTAAATAAATCAACTGTGGTGAGAGCTATATTTGAAACCACCAATCCATCCATGGTGTTCCAGAAATGTGGAATTCGTCTAGTCTATGGGCAAGATGCTGGATGGCTTTACAGAATATCCCCGCACGACACCAGTCAATCGATTTGTCCGAATGATGAGGACAAAGTCTCTGTATTGGAGTCTGGCTGGTTTGGTCAATCTTTGGAATGGGAGAAATTCATTCCACCCTTGGAAGAAGAATCCACGCTTGCGTTGAGAAAGAACCTTGAATCTGTTCTTCCAAGATATCTTGAGGCACTAAACAGTGACTCTGAAATGTTCAAATTTAACCTCAGAGGATGCCCAGGTTGGTTTCATGAGTCGTTTTTCCGTAGGACGAGGTCAGATTTGGTCAGAATGTCAATGAAGCTGCCTCAAAATCTACACAAGAGCAAGAAGTGGATGGGATTTGCAATATACGCATCACTTGTAGAGGAAGTAGGGCAGACAATGAAAGAGGACAACTATTGTGTATGTGGTCGGCTATCAGCTGGGGATGAATTTGATATGGCTATGGGCCGAGAACTAAAGTACGTCAGGCCATTGTCAGAAGAACATCATCAACTATTGGTTTTTTACATACCGCGGGGACAGATTCGTGAAGCGTTGTTCACTCAGACATTAACAACTACAATGGACTTTACCATCAAAATCTATAGCCCCCATGTAAAAGTTCAAGGATATGGGATCCGTATTGTGTATCAGGAAGATATACAAGGGTTTGCTGATACAATTATCCGGTGCATGCAAAGGGAAGATTCTCTTGAATCTCACAATAAGTTGGAAGATTCTCTTGAATCTCACAATAAGTTGGTGGTAGAAGAATGGATACGATTGATACGATTGCAAGGTGCCCTAAATTTAGAGAGAATGACAGAACGGGATTCCAGAACCCCACGGGAAAAATACTTTGAATTGCACTCACGAAAATATAGAAAATGGGACTGGTACTCTCCTATTATTCTTTCTTGTGACTTCGAGGGAGCTGAAATTTCCAAGTGGAAATGGTTCAGGCCTTTCATCAACCAAGGCAACTCTGCAAAAATCCAACTGCCTTTGAATGTGTTCGATGTTGATAATTGGTTGGGGTTTGTTGCATGTTGTTGGTTGTCCCACGACCAATATCCAAACATTAGTCGTGGCAGTACCGTTGTCGATTCAGAGACTGTTACACTTGCTTATCGTCTGGACTCTGATGTTGCTTGGCAGGGCTTATTTGATTGCAGGATGGACAGTGATATTAAGATACAGCAGCCATCGAAATACTATGCGACTCGGTTCCATTATGTACCGCGCAATGCACTTCAATGTAACATTTGGAGGCAATGCAAATGGGCCAGGATAACTATGCTGTCGTATAGACCATGCTTAGTGGTGGATAGGTGTGCCCTTCGTCTACTATTTAAGGAGGACGTTGAACAGCTTGTAGAAACACTGACCCTCGCTGAATTACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

622

Amino Acids

72.15

Weight (kDa)

5.87

Isoelectric Point (pI)

41.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 12 - 156 1.2e-07 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1262
AccI GTMKAC 1 cut(s) 1807
AccII CGCG 3 cut(s) 143, 997, 1705
AciI CCGC 5 cut(s) 141, 494, 995, 997, 1703
AclWI GGATC 4 cut(s) 191, 204, 1093, 1106
AcoI YGGCCR 1 cut(s) 111
AcsI RAATTY 8 cut(s) 16, 45, 444, 587, 695, 911, 1270, 1401
AfaI GTAC 4 cut(s) 944, 1361, 1558, 1701
AfiI CCNNNNNNNGG 1 cut(s) 368
AjnI CCWGG 2 cut(s) 715, 1748
AluBI AGCT 6 cut(s) 71, 398, 781, 902, 1397, 1834
AluI AGCT 6 cut(s) 71, 398, 781, 902, 1397, 1834
Alw26I GTCTC 2 cut(s) 544, 1568
AlwI GGATC 4 cut(s) 191, 204, 1093, 1106
AlwNI CAGNNNCTG 1 cut(s) 1577
AoxI GGCC 5 cut(s) 111, 928, 950, 1424, 1746
ApeKI GCWGC 3 cut(s) 303, 781, 1663
ApoI RAATTY 8 cut(s) 16, 45, 444, 587, 695, 911, 1270, 1401
Asp700I GAANNNNTTC 3 cut(s) 645, 1418, 1475
AspLEI GCGC 1 cut(s) 1707
AspS9I GGNCC 2 cut(s) 928, 1746
AsuHPI GGTGA 1 cut(s) 403
BaeGI GKGCMC 2 cut(s) 1267, 1801
BamHI GGATCC 2 cut(s) 196, 1098
BanI GGYRCC 1 cut(s) 1262
BarI GAAGNNNNNNTAC 2 cut(s) 1224, 1256
BbvI GCAGC 3 cut(s) 290, 768, 1675
BccI CCATC 6 cut(s) 427, 468, 808, 1064, 1633, 1675
BciT130I CCWGG 2 cut(s) 717, 1750
BciVI GTATCC 1 cut(s) 1233
BcoDI GTCTC 2 cut(s) 544, 1568
BfaI CTAG 1 cut(s) 452
BfmI CTRYAG 3 cut(s) 36, 66, 1066
BfuI GTATCC 1 cut(s) 1233
BisI GCNGC 4 cut(s) 141, 304, 782, 1664
BlsI GCNGC 4 cut(s) 142, 305, 783, 1665
Bme1390I CCNGG 2 cut(s) 717, 1750
BmgT120I GGNCC 2 cut(s) 928, 1746
BmiI GGNNCC 5 cut(s) 198, 258, 1100, 1264, 1691
BmrFI CCNGG 2 cut(s) 717, 1750
BmsI GCATC 3 cut(s) 457, 701, 842
BoxI GACNNNNGTC 1 cut(s) 504
BpuEI CTTGAG 1 cut(s) 683
Bsa29I ATCGAT 1 cut(s) 512
BsaJI CCNNGG 6 cut(s) 423, 600, 715, 995, 1307, 1438
BsaWI WCCGGW 2 cut(s) 193, 1149
Bsc4I CCNNNNNNNGG 1 cut(s) 368
Bse1I ACTGG 3 cut(s) 131, 504, 1361
Bse3DI GCAATG 2 cut(s) 1714, 1742
BseBI CCWGG 2 cut(s) 717, 1750
BseCI ATCGAT 1 cut(s) 512
BseDI CCNNGG 6 cut(s) 423, 600, 715, 995, 1307, 1438
BseGI GGATG 6 cut(s) 419, 479, 716, 819, 913, 1644
BseLI CCNNNNNNNGG 1 cut(s) 368
BseMI GCAATG 2 cut(s) 1714, 1742
BseMII CTCAG 3 cut(s) 171, 718, 1040
BseNI ACTGG 3 cut(s) 131, 504, 1361
BseSI GKGCMC 2 cut(s) 1267, 1801
BseXI GCAGC 3 cut(s) 290, 768, 1675
BseYI CCCAGC 1 cut(s) 902
Bsh1236I CGCG 3 cut(s) 143, 997, 1705
BshFI GGCC 5 cut(s) 113, 930, 952, 1426, 1748
BshNI GGYRCC 1 cut(s) 1262
BshVI ATCGAT 1 cut(s) 512
BsiSI CCGG 2 cut(s) 194, 1150
BslFI GGGAC 3 cut(s) 1014, 1367, 1507
BslI CCNNNNNNNGG 1 cut(s) 368
BsmAI GTCTC 2 cut(s) 544, 1568
BsmFI GGGAC 3 cut(s) 1014, 1367, 1507
BsnI GGCC 5 cut(s) 113, 930, 952, 1426, 1748
Bsp1286I GDGCHC 2 cut(s) 1267, 1801
Bsp143I GATC 2 cut(s) 196, 1098
Bsp19I CCATGG 1 cut(s) 423
BspACI CCGC 5 cut(s) 141, 494, 995, 997, 1703
BspANI GGCC 5 cut(s) 113, 930, 952, 1426, 1748
BspCNI CTCAG 3 cut(s) 170, 717, 1039
BspDI ATCGAT 1 cut(s) 512
BspFNI CGCG 3 cut(s) 143, 997, 1705
BspHI TCATGA 1 cut(s) 727
BspLI GGNNCC 5 cut(s) 198, 258, 1100, 1264, 1691
BspPI GGATC 4 cut(s) 191, 204, 1093, 1106
BspT107I GGYRCC 1 cut(s) 1262
BsrDI GCAATG 2 cut(s) 1714, 1742
BsrI ACTGG 3 cut(s) 131, 504, 1361
BssECI CCNNGG 6 cut(s) 423, 600, 715, 995, 1307, 1438
BssMI GATC 2 cut(s) 196, 1098
BssT1I CCWWGG 3 cut(s) 423, 600, 1438
Bst2UI CCWGG 2 cut(s) 717, 1750
Bst4CI ACNGT 5 cut(s) 388, 677, 1561, 1579, 1646
BstC8I GCNNGC 2 cut(s) 621, 1157
BstDEI CTNAG 4 cut(s) 157, 704, 1026, 1780
BstDSI CCRYGG 3 cut(s) 423, 995, 1307
BstF5I GGATG 6 cut(s) 419, 479, 716, 819, 913, 1644
BstFNI CGCG 3 cut(s) 143, 997, 1705
BstHHI GCGC 1 cut(s) 1707
BstKTI GATC 2 cut(s) 199, 1101
BstMAI GTCTC 2 cut(s) 544, 1568
BstMBI GATC 2 cut(s) 196, 1098
BstMWI GCNNNNNNNGC 2 cut(s) 146, 830
BstNI CCWGG 2 cut(s) 717, 1750
BstNSI RCATGY 2 cut(s) 1159, 1512
BstPAI GACNNNNGTC 1 cut(s) 504
BstSCI CCNGG 2 cut(s) 715, 1748
BstSFI CTRYAG 3 cut(s) 36, 66, 1066
BstSLI GKGCMC 2 cut(s) 1267, 1801
BstUI CGCG 3 cut(s) 143, 997, 1705
BstV1I GCAGC 3 cut(s) 290, 768, 1675
BstX2I RGATCY 2 cut(s) 196, 1098
BstXI CCANNNNNNTGG 1 cut(s) 440
BstYI RGATCY 2 cut(s) 196, 1098
Bsu15I ATCGAT 1 cut(s) 512
BsuI GTATCC 1 cut(s) 1233
BsuRI GGCC 5 cut(s) 113, 930, 952, 1426, 1748
BsuTUI ATCGAT 1 cut(s) 512
BtgI CCRYGG 3 cut(s) 423, 995, 1307
BtsCI GGATG 6 cut(s) 419, 479, 716, 819, 913, 1644
BtsIMutI CAGTG 5 cut(s) 288, 297, 682, 1651, 1844
Cac8I GCNNGC 2 cut(s) 621, 1157
CaiI CAGNNNCTG 1 cut(s) 1577
CciI TCATGA 1 cut(s) 727
CfoI GCGC 1 cut(s) 1707
Cfr13I GGNCC 2 cut(s) 928, 1746
Cfr42I CCGCGG 1 cut(s) 998
ClaI ATCGAT 1 cut(s) 512
CseI GACGC 1 cut(s) 239
Csp6I GTAC 4 cut(s) 943, 1360, 1557, 1700
CviAII CATG 6 cut(s) 424, 728, 1076, 1156, 1509, 1776
CviQI GTAC 4 cut(s) 943, 1360, 1557, 1700
DdeI CTNAG 4 cut(s) 157, 704, 1026, 1780
DpnI GATC 2 cut(s) 198, 1100
DpnII GATC 2 cut(s) 196, 1098
EaeI YGGCCR 1 cut(s) 111
Eco130I CCWWGG 3 cut(s) 423, 600, 1438
Eco147I AGGCCT 1 cut(s) 1426
Eco32I GATATC 1 cut(s) 659
EcoRI GAATTC 1 cut(s) 444
EcoRII CCWGG 2 cut(s) 715, 1748
EcoRV GATATC 1 cut(s) 659
EcoT14I CCWWGG 3 cut(s) 423, 600, 1438
ErhI CCWWGG 3 cut(s) 423, 600, 1438
FaeI CATG 6 cut(s) 427, 731, 1079, 1159, 1512, 1779
FalI AAGNNNNNCTT 4 cut(s) 1158, 1190, 1188, 1220
FaqI GGGAC 3 cut(s) 1014, 1367, 1507
FatI CATG 6 cut(s) 423, 727, 1075, 1155, 1508, 1775
FauI CCCGC 2 cut(s) 501, 990
FblI GTMKAC 1 cut(s) 1807
Fnu4HI GCNGC 4 cut(s) 141, 304, 782, 1664
FokI GGATG 6 cut(s) 406, 486, 723, 826, 920, 1651
Fsp4HI GCNGC 4 cut(s) 141, 304, 782, 1664
FspBI CTAG 1 cut(s) 452
GlaI GCGC 1 cut(s) 1706
GluI GCNGC 4 cut(s) 141, 304, 782, 1664
GsaI CCCAGC 1 cut(s) 906
HaeIII GGCC 5 cut(s) 113, 930, 952, 1426, 1748
HapII CCGG 2 cut(s) 194, 1150
HgaI GACGC 1 cut(s) 239
HhaI GCGC 1 cut(s) 1707
Hin1II CATG 6 cut(s) 427, 731, 1079, 1159, 1512, 1779
Hin6I GCGC 1 cut(s) 1705
HinP1I GCGC 1 cut(s) 1705
HpaII CCGG 2 cut(s) 194, 1150
HphI GGTGA 1 cut(s) 403
Hpy166II GTNNAC 2 cut(s) 1023, 1808
Hpy188I TCNGA 9 cut(s) 522, 685, 707, 757, 767, 961, 1029, 1573, 1606
Hpy8I GTNNAC 2 cut(s) 1023, 1808
HpyAV CCTTC 2 cut(s) 124, 1811
HpyCH4III ACNGT 5 cut(s) 388, 677, 1561, 1579, 1646
HpyCH4IV ACGT 2 cut(s) 945, 1824
HpyF10VI GCNNNNNNNGC 2 cut(s) 146, 830
HpyF3I CTNAG 4 cut(s) 157, 704, 1026, 1780
HpySE526I ACGT 2 cut(s) 945, 1824
Hsp92II CATG 6 cut(s) 427, 731, 1079, 1159, 1512, 1779
HspAI GCGC 1 cut(s) 1705
KspI CCGCGG 1 cut(s) 998
Kzo9I GATC 2 cut(s) 196, 1098
LmnI GCTCC 1 cut(s) 1394
Lsp1109I GCAGC 3 cut(s) 290, 768, 1675
LweI GCATC 3 cut(s) 457, 701, 842
MaeI CTAG 1 cut(s) 452
MaeII ACGT 2 cut(s) 945, 1824
MaeIII GTNAC 5 cut(s) 226, 677, 1382, 1579, 1721
MalI GATC 2 cut(s) 198, 1100
MboI GATC 2 cut(s) 196, 1098
MboII GAAGA 8 cut(s) 617, 620, 641, 974, 1130, 1178, 1208, 1244
MflI RGATCY 2 cut(s) 196, 1098
MhlI GDGCHC 2 cut(s) 1267, 1801
MlyI GAGTC 5 cut(s) 560, 674, 740, 1595, 1678
MmeI TCCRAC 2 cut(s) 1173, 1483
MroXI GAANNNNTTC 3 cut(s) 645, 1418, 1475
MseI TTAA 7 cut(s) 162, 314, 374, 699, 1034, 1653, 1815
MslI CAYNNNNRTG 1 cut(s) 1717
MspA1I CMGCKG 2 cut(s) 902, 997
MspI CCGG 2 cut(s) 194, 1150
MspR9I CCNGG 2 cut(s) 717, 1750
MvaI CCWGG 2 cut(s) 717, 1750
MvnI CGCG 3 cut(s) 143, 997, 1705
MwoI GCNNNNNNNGC 2 cut(s) 146, 830
NcoI CCATGG 1 cut(s) 423
NdeII GATC 2 cut(s) 196, 1098
NlaIII CATG 6 cut(s) 427, 731, 1079, 1159, 1512, 1779
NlaIV GGNNCC 5 cut(s) 198, 258, 1100, 1264, 1691
NmeAIII GCCGAG 1 cut(s) 956
NmuCI GTSAC 3 cut(s) 226, 677, 1382
NspI RCATGY 2 cut(s) 1159, 1512
PaeI GCATGC 1 cut(s) 1159
PagI TCATGA 1 cut(s) 727
PceI AGGCCT 1 cut(s) 1426
PcsI WCGNNNNNNNCGW 2 cut(s) 518, 1249
PdmI GAANNNNTTC 3 cut(s) 645, 1418, 1475
PflFI GACNNNGTC 2 cut(s) 536, 751
PkrI GCNGC 4 cut(s) 142, 305, 783, 1665
PleI GAGTC 5 cut(s) 559, 674, 739, 1595, 1678
PpsI GAGTC 5 cut(s) 559, 674, 739, 1595, 1678
PshAI GACNNNNGTC 1 cut(s) 504
Psp6I CCWGG 2 cut(s) 715, 1748
PspFI CCCAGC 1 cut(s) 902
PspGI CCWGG 2 cut(s) 715, 1748
PspN4I GGNNCC 5 cut(s) 198, 258, 1100, 1264, 1691
PspPI GGNCC 2 cut(s) 928, 1746
PstNI CAGNNNCTG 1 cut(s) 1577
PsuI RGATCY 2 cut(s) 196, 1098
PsyI GACNNNGTC 2 cut(s) 536, 751
PvuII CAGCTG 1 cut(s) 902
RsaI GTAC 4 cut(s) 944, 1361, 1558, 1701
RsaNI GTAC 4 cut(s) 943, 1360, 1557, 1700
RseI CAYNNNNRTG 1 cut(s) 1717
SacII CCGCGG 1 cut(s) 998
SaqAI TTAA 7 cut(s) 162, 314, 374, 699, 1034, 1653, 1815
SatI GCNGC 4 cut(s) 141, 304, 782, 1664
Sau3AI GATC 2 cut(s) 196, 1098
Sau96I GGNCC 2 cut(s) 928, 1746
SchI GAGTC 5 cut(s) 560, 674, 740, 1595, 1678
ScrFI CCNGG 2 cut(s) 717, 1750
SduI GDGCHC 2 cut(s) 1267, 1801
SfaNI GCATC 3 cut(s) 457, 701, 842
SfcI CTRYAG 3 cut(s) 36, 66, 1066
Sfr303I CCGCGG 1 cut(s) 998
SgrBI CCGCGG 1 cut(s) 998
SmiMI CAYNNNNRTG 1 cut(s) 1717
SmlI CTYRAG 1 cut(s) 662
SmoI CTYRAG 1 cut(s) 662
SphI GCATGC 1 cut(s) 1159
SseBI AGGCCT 1 cut(s) 1426
SsiI CCGC 5 cut(s) 141, 494, 995, 997, 1703
SspMI CTAG 1 cut(s) 452
StuI AGGCCT 1 cut(s) 1426
StyD4I CCNGG 2 cut(s) 715, 1748
StyI CCWWGG 3 cut(s) 423, 600, 1438
TaaI ACNGT 5 cut(s) 388, 677, 1561, 1579, 1646
TaiI ACGT 2 cut(s) 948, 1827
TaqI TCGA 7 cut(s) 95, 234, 512, 1389, 1479, 1566, 1670
TauI GCSGC 1 cut(s) 143
Tru1I TTAA 7 cut(s) 162, 314, 374, 699, 1034, 1653, 1815
Tru9I TTAA 7 cut(s) 162, 314, 374, 699, 1034, 1653, 1815
TscAI CASTG 5 cut(s) 288, 297, 682, 1651, 1851
TseFI GTSAC 3 cut(s) 226, 677, 1382
TseI GCWGC 3 cut(s) 303, 781, 1663
Tsp45I GTSAC 3 cut(s) 226, 677, 1382
TspDTI ATGAA 7 cut(s) 57, 580, 716, 791, 878, 924, 1420
TspGWI ACGGA 2 cut(s) 731, 1091
TspRI CASTG 5 cut(s) 288, 297, 682, 1651, 1851
Tth111I GACNNNGTC 2 cut(s) 536, 751
XapI RAATTY 8 cut(s) 16, 45, 444, 587, 695, 911, 1270, 1401
XceI RCATGY 2 cut(s) 1159, 1512
XcmI CCANNNNNNNNNTGG 1 cut(s) 421
XmiI GTMKAC 1 cut(s) 1807
XmnI GAANNNNTTC 3 cut(s) 645, 1418, 1475
XspI CTAG 1 cut(s) 452
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.