Rmu_sc0020672.1_g000001

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020672.1
OG0000129
Physical Location & Seq
Reverse (-)
1 .. 2371
2371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020672.1_g000001.1.cds

Sequence Viewer

Length: 2060 bp
atgtcgactccagacttcactgaggttcctgatcttcatgagttggagcttcaatattgtacaagcttggtggaggttcacccgtctcttggatttctgaagaaacttgtctctctgaatatgacacattgcaggtctattgagagccttccacctttcactgcccttgaatccctccaaatattgaggctttcattctgttcagggctgaagaagtttccagaaattgaaggaaatatgaaaagcttgctggagcttcatttggatagaaccagcattgaggaattgccttcatcaattgaacacttgactggtcttaccatattgaatctaacagactgtaaaaaccttttgcatcttcccgataccgttgggtgcttgacttctttgaaaagtctccatctaacaggttgctccaaaattgatgagatacctgagaatctgaaaggtatgatatgtctggagaagcttacaattggtggaacttccatgagggagttatctttcattgtaggcatgaagaatctacggtatctatcctgcgaaggatgtaaatgtctagtttcagaatcatgcaaaggcctggcttcgatatcgaatttgatagcgctagacttgagttattgcaacctgatggatggagcaattctcaatgatttaagcagcctaatctccttggaatttttagatttaagtggtaattgcttcgtgcgattacctgaaagtatctctcaactctcaaagctcgacactctgcacttgagtaattgcagacagcttcaattgctgcccaagaagcttccgttaagtcttcatcacgtgtatgcacaagattgtacttcactgacagattacccaaatcaaatcaaagaattgaattcatcggagtcgggactgactattatcgattccctcaattcttcagcacttggagtctcacaaagttcgtcctggttgaatttttcaagcattgtaggagaacctctacaagcgcatgtgagatataatcatccagaggggataaaagtttatcatgtgccacggataacagttctaaaacaagagcctttcttttcagatttcagtagcgcacatcctacagatgaaattccagagtggttcagcgctatatctaccagaaatcccatattaagcccgatacctcaaaatctggccgatgataacaagtggaagggatttgccgcgggtgctatattctcagtcaaggggcacactgctctctcccttattgaaccggatcctgatttttctaattactcgtatcaagtcacaatcgaaactgatgttgtgcgcctggaaccacaagtgttcgggataggactcagctgccttgcatcaagttctcatctgcttataattttctatatagagtgtctgaagtttccacgatgggggttaaatcaatcaactgtggtgagagctatatttgaaaccaccaatccatccatggtggtccagaaatgtggaattcatctactctatgagcaagatgctggatggcattccagaatccgcaggcatcaaccgattgtgctgaacaaaaaggacgccggctctctacgggattctgcttggcttcgtccatcttttagatgggagaaattcattccacccttggaagaagaatccacacgtgtgctgagaaagaacctggagtctgttcttccaagataccttgaggcactaaactgttattctaaaacgtacaaatttaacctcagtggaaggccagggtggtttcatgagtcgtttgtctttcctcagagggctggttttactgtagcatcaatcaagcggcctcaaaatctacacaagagcaagaagtggaagggatttgcaatatatgcatcacttgtagaggaagtggggcagacaatggaaaaggacaactattgggtacgcgtatttgttacaccaagaactggggataaatttcgtttgggtgtggcccgagtacttaagcatgtcaggccattgtcagaagaacatcatcaactattggttatttacataccacgggcacaaattcctgaagtgtt
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

686

Amino Acids

77.31

Weight (kDa)

6.78

Isoelectric Point (pI)

46.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1376
Acc36I ACCTGC 1 cut(s) 123
AccB7I CCANNNNNTGG 1 cut(s) 1943
AccI GTMKAC 1 cut(s) 5
AccII CGCG 2 cut(s) 1205, 1923
AciI CCGC 4 cut(s) 1203, 1205, 1534, 1816
AclWI GGATC 2 cut(s) 1253, 1266
AcoI YGGCCR 1 cut(s) 1173
AcuI CTGAAG 4 cut(s) 119, 230, 906, 1418
AcvI CACGTG 2 cut(s) 820, 1655
AcyI GRCGYC 1 cut(s) 1569
AfaI GTAC 5 cut(s) 61, 838, 1727, 1920, 1977
AfeI AGCGCT 2 cut(s) 609, 1126
AfiI CCNNNNNNNGG 3 cut(s) 89, 1412, 1943
AflII CTTAAG 1 cut(s) 1979
AflIII ACRYGT 4 cut(s) 819, 1652, 1654, 1921
AjnI CCWGG 5 cut(s) 582, 950, 1314, 1671, 1750
AleI CACNNNNGTG 1 cut(s) 1655
Alw26I GTCTC 4 cut(s) 90, 115, 401, 940
AlwI GGATC 2 cut(s) 1253, 1266
Ama87I CYCGRG 1 cut(s) 1971
Aor51HI AGCGCT 2 cut(s) 609, 1126
AoxI GGCC 6 cut(s) 580, 1173, 1748, 1817, 1968, 1991
ApeKI GCWGC 3 cut(s) 663, 787, 1347
AspLEI GCGC 5 cut(s) 610, 994, 1091, 1127, 1314
AspS9I GGNCC 2 cut(s) 1474, 1969
AsuHPI GGTGA 2 cut(s) 71, 1447
AvaI CYCGRG 1 cut(s) 1971
AvaII GGWCC 1 cut(s) 1474
BaeGI GKGCMC 2 cut(s) 1233, 2044
BamHI GGATCC 1 cut(s) 1258
BbrPI CACGTG 2 cut(s) 820, 1655
BbsI GAAGAC 1 cut(s) 803
BbvI GCAGC 3 cut(s) 675, 774, 1334
BccI CCATC 8 cut(s) 408, 628, 632, 1404, 1471, 1512, 1608, 1612
BciT130I CCWGG 5 cut(s) 584, 952, 1316, 1673, 1752
BcoDI GTCTC 4 cut(s) 90, 115, 401, 940
BfaI CTAG 2 cut(s) 560, 611
BfmI CTRYAG 2 cut(s) 1098, 1800
BfoI RGCGCY 2 cut(s) 611, 1128
BfrI CTTAAG 1 cut(s) 1979
BfuAI ACCTGC 1 cut(s) 123
BisI GCNGC 5 cut(s) 664, 788, 1203, 1348, 1817
BlsI GCNGC 5 cut(s) 665, 789, 1204, 1349, 1818
BmcAI AGTACT 1 cut(s) 1977
Bme1390I CCNGG 5 cut(s) 584, 952, 1316, 1673, 1752
Bme18I GGWCC 1 cut(s) 1474
BmeT110I CYCGRG 1 cut(s) 1971
BmgT120I GGNCC 2 cut(s) 1474, 1969
BmiI GGNNCC 3 cut(s) 27, 1260, 1320
BmrFI CCNGG 5 cut(s) 584, 952, 1316, 1673, 1752
BmrI ACTGGG 1 cut(s) 1953
BmsI GCATC 6 cut(s) 364, 1364, 1501, 1549, 1814, 1877
BmuI ACTGGG 1 cut(s) 1953
BpiI GAAGAC 1 cut(s) 803
BplI GAGNNNNNCTC 2 cut(s) 633, 665
BpmI CTGGAG 3 cut(s) 272, 482, 1694
BpuEI CTTGAG 3 cut(s) 637, 781, 1718
Bsa29I ATCGAT 1 cut(s) 906
BsaAI YACGTR 2 cut(s) 820, 1655
BsaHI GRCGYC 1 cut(s) 1569
BsaJI CCNNGG 7 cut(s) 675, 1040, 1203, 1467, 1635, 1751, 2036
BsaWI WCCGGW 1 cut(s) 1255
Bsc4I CCNNNNNNNGG 3 cut(s) 89, 1412, 1943
Bse118I RCCGGY 1 cut(s) 1571
Bse1I ACTGG 2 cut(s) 316, 1948
Bse3DI GCAATG 1 cut(s) 127
BseBI CCWGG 5 cut(s) 584, 952, 1316, 1673, 1752
BseCI ATCGAT 1 cut(s) 906
BseDI CCNNGG 7 cut(s) 675, 1040, 1203, 1467, 1635, 1751, 2036
BseGI GGATG 6 cut(s) 554, 643, 1009, 1093, 1463, 1523
BseLI CCNNNNNNNGG 3 cut(s) 89, 1412, 1943
BseMI GCAATG 1 cut(s) 127
BseMII CTCAG 7 cut(s) 12, 426, 1233, 1357, 1652, 1753, 1796
BseNI ACTGG 2 cut(s) 316, 1948
BseSI GKGCMC 2 cut(s) 1233, 2044
BseXI GCAGC 3 cut(s) 675, 774, 1334
BsgI GTGCAG 1 cut(s) 740
Bsh1236I CGCG 2 cut(s) 1205, 1923
BshFI GGCC 6 cut(s) 582, 1175, 1750, 1819, 1970, 1993
BshVI ATCGAT 1 cut(s) 906
BsiHKCI CYCGRG 1 cut(s) 1971
BsiSI CCGG 2 cut(s) 1256, 1572
BslFI GGGAC 1 cut(s) 906
BslI CCNNNNNNNGG 3 cut(s) 89, 1412, 1943
BsmAI GTCTC 4 cut(s) 90, 115, 401, 940
BsmBI CGTCTC 1 cut(s) 90
BsmFI GGGAC 1 cut(s) 906
BsmI GAATGC 1 cut(s) 1522
BsnI GGCC 6 cut(s) 582, 1175, 1750, 1819, 1970, 1993
BsoBI CYCGRG 1 cut(s) 1971
Bsp1286I GDGCHC 2 cut(s) 1233, 2044
Bsp1407I TGTACA 1 cut(s) 59
Bsp143I GATC 2 cut(s) 31, 1258
Bsp19I CCATGG 1 cut(s) 1467
BspACI CCGC 4 cut(s) 1203, 1205, 1534, 1816
BspANI GGCC 6 cut(s) 582, 1175, 1750, 1819, 1970, 1993
BspCNI CTCAG 7 cut(s) 13, 427, 1232, 1356, 1653, 1752, 1795
BspDI ATCGAT 1 cut(s) 906
BspFNI CGCG 2 cut(s) 1205, 1923
BspHI TCATGA 2 cut(s) 37, 1762
BspLI GGNNCC 3 cut(s) 27, 1260, 1320
BspMI ACCTGC 1 cut(s) 123
BspPI GGATC 2 cut(s) 1253, 1266
BspTI CTTAAG 1 cut(s) 1979
BsrDI GCAATG 1 cut(s) 127
BsrFI RCCGGY 1 cut(s) 1571
BsrGI TGTACA 1 cut(s) 59
BsrI ACTGG 2 cut(s) 316, 1948
BssAI RCCGGY 1 cut(s) 1571
BssECI CCNNGG 7 cut(s) 675, 1040, 1203, 1467, 1635, 1751, 2036
BssMI GATC 2 cut(s) 31, 1258
BssNI GRCGYC 1 cut(s) 1569
BssT1I CCWWGG 3 cut(s) 675, 1467, 1635
Bst2UI CCWGG 5 cut(s) 584, 952, 1316, 1673, 1752
Bst4CI ACNGT 7 cut(s) 341, 370, 531, 1051, 1432, 1712, 1801
BstACI GRCGYC 1 cut(s) 1569
BstAFI CTTAAG 1 cut(s) 1979
BstAPI GCANNNNNTGC 1 cut(s) 1865
BstAUI TGTACA 1 cut(s) 59
BstBAI YACGTR 2 cut(s) 820, 1655
BstC8I GCNNGC 3 cut(s) 248, 1538, 1573
BstDEI CTNAG 7 cut(s) 21, 435, 1219, 1343, 1661, 1739, 1782
BstDSI CCRYGG 4 cut(s) 1040, 1203, 1467, 2036
BstF5I GGATG 6 cut(s) 554, 643, 1009, 1093, 1463, 1523
BstFNI CGCG 2 cut(s) 1205, 1923
BstH2I RGCGCY 2 cut(s) 611, 1128
BstHHI GCGC 5 cut(s) 610, 994, 1091, 1127, 1314
BstKTI GATC 2 cut(s) 34, 1261
BstMAI GTCTC 4 cut(s) 90, 115, 401, 940
BstMBI GATC 2 cut(s) 31, 1258
BstMWI GCNNNNNNNGC 5 cut(s) 784, 796, 1208, 1865, 1990
BstNI CCWGG 5 cut(s) 584, 952, 1316, 1673, 1752
BstNSI RCATGY 2 cut(s) 998, 1988
BstSCI CCNGG 5 cut(s) 582, 950, 1314, 1671, 1750
BstSFI CTRYAG 2 cut(s) 1098, 1800
BstSLI GKGCMC 2 cut(s) 1233, 2044
BstUI CGCG 2 cut(s) 1205, 1923
BstV1I GCAGC 3 cut(s) 675, 774, 1334
BstV2I GAAGAC 1 cut(s) 803
BstX2I RGATCY 1 cut(s) 1258
BstXI CCANNNNNNTGG 1 cut(s) 1484
BstYI RGATCY 1 cut(s) 1258
Bsu15I ATCGAT 1 cut(s) 906
BsuRI GGCC 6 cut(s) 582, 1175, 1750, 1819, 1970, 1993
BsuTUI ATCGAT 1 cut(s) 906
BtgI CCRYGG 4 cut(s) 1040, 1203, 1467, 2036
BtsCI GGATG 6 cut(s) 554, 643, 1009, 1093, 1463, 1523
BtsI GCAGTG 2 cut(s) 159, 1233
BtsIMutI CAGTG 5 cut(s) 18, 159, 842, 1233, 1747
BveI ACCTGC 1 cut(s) 123
Cac8I GCNNGC 3 cut(s) 248, 1538, 1573
CciI TCATGA 2 cut(s) 37, 1762
CfoI GCGC 5 cut(s) 610, 994, 1091, 1127, 1314
Cfr10I RCCGGY 1 cut(s) 1571
Cfr13I GGNCC 2 cut(s) 1474, 1969
Cfr42I CCGCGG 1 cut(s) 1206
ClaI ATCGAT 1 cut(s) 906
CseI GACGC 1 cut(s) 1577
Csp6I GTAC 5 cut(s) 60, 837, 1726, 1919, 1976
CspCI CAANNNNNGTGG 2 cut(s) 51, 86
CviAII CATG 9 cut(s) 38, 490, 517, 573, 995, 1034, 1468, 1763, 1985
CviQI GTAC 5 cut(s) 60, 837, 1726, 1919, 1976
DdeI CTNAG 7 cut(s) 21, 435, 1219, 1343, 1661, 1739, 1782
DpnI GATC 2 cut(s) 33, 1260
DpnII GATC 2 cut(s) 31, 1258
EaeI YGGCCR 1 cut(s) 1173
Eco130I CCWWGG 3 cut(s) 675, 1467, 1635
Eco147I AGGCCT 1 cut(s) 582
Eco32I GATATC 1 cut(s) 594
Eco47I GGWCC 1 cut(s) 1474
Eco47III AGCGCT 2 cut(s) 609, 1126
Eco57I CTGAAG 4 cut(s) 119, 230, 906, 1418
Eco72I CACGTG 2 cut(s) 820, 1655
Eco88I CYCGRG 1 cut(s) 1971
EcoRI GAATTC 2 cut(s) 877, 1488
EcoRII CCWGG 5 cut(s) 582, 950, 1314, 1671, 1750
EcoRV GATATC 1 cut(s) 594
EcoT14I CCWWGG 3 cut(s) 675, 1467, 1635
EcoT22I ATGCAT 1 cut(s) 1870
ErhI CCWWGG 3 cut(s) 675, 1467, 1635
Esp3I CGTCTC 1 cut(s) 90
FaeI CATG 9 cut(s) 41, 493, 520, 576, 998, 1037, 1471, 1766, 1988
FaqI GGGAC 1 cut(s) 906
FatI CATG 9 cut(s) 37, 489, 516, 572, 994, 1033, 1467, 1762, 1984
FauI CCCGC 1 cut(s) 1198
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 5 cut(s) 664, 788, 1203, 1348, 1817
FokI GGATG 6 cut(s) 561, 650, 996, 1080, 1450, 1530
Fsp4HI GCNGC 5 cut(s) 664, 788, 1203, 1348, 1817
FspBI CTAG 2 cut(s) 560, 611
GlaI GCGC 5 cut(s) 609, 993, 1090, 1126, 1313
GluI GCNGC 5 cut(s) 664, 788, 1203, 1348, 1817
GsuI CTGGAG 3 cut(s) 272, 482, 1694
HaeII RGCGCY 2 cut(s) 611, 1128
HaeIII GGCC 6 cut(s) 582, 1175, 1750, 1819, 1970, 1993
HapII CCGG 2 cut(s) 1256, 1572
HgaI GACGC 1 cut(s) 1577
HhaI GCGC 5 cut(s) 610, 994, 1091, 1127, 1314
Hin1I GRCGYC 1 cut(s) 1569
Hin1II CATG 9 cut(s) 41, 493, 520, 576, 998, 1037, 1471, 1766, 1988
Hin6I GCGC 5 cut(s) 608, 992, 1089, 1125, 1312
HinP1I GCGC 5 cut(s) 608, 992, 1089, 1125, 1312
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 4 cut(s) 64, 244, 467, 797
HpaII CCGG 2 cut(s) 1256, 1572
HphI GGTGA 2 cut(s) 71, 1447
Hpy166II GTNNAC 2 cut(s) 6, 79
Hpy188I TCNGA 9 cut(s) 99, 117, 444, 568, 886, 1078, 1398, 1785, 2002
Hpy8I GTNNAC 2 cut(s) 6, 79
HpyAV CCTTC 7 cut(s) 158, 224, 300, 539, 1186, 1740, 1843
HpyCH4III ACNGT 7 cut(s) 341, 370, 531, 1051, 1432, 1712, 1801
HpyCH4IV ACGT 3 cut(s) 819, 1654, 1724
HpyF10VI GCNNNNNNNGC 5 cut(s) 784, 796, 1208, 1865, 1990
HpyF3I CTNAG 7 cut(s) 21, 435, 1219, 1343, 1661, 1739, 1782
HpySE526I ACGT 3 cut(s) 819, 1654, 1724
Hsp92I GRCGYC 1 cut(s) 1569
Hsp92II CATG 9 cut(s) 41, 493, 520, 576, 998, 1037, 1471, 1766, 1988
HspAI GCGC 5 cut(s) 608, 992, 1089, 1125, 1312
KroI GCCGGC 1 cut(s) 1571
KroNI GCCGGC 1 cut(s) 1573
KspI CCGCGG 1 cut(s) 1206
Kzo9I GATC 2 cut(s) 31, 1258
LmnI GCTCC 4 cut(s) 46, 253, 419, 641
Lsp1109I GCAGC 3 cut(s) 675, 774, 1334
LweI GCATC 6 cut(s) 364, 1364, 1501, 1549, 1814, 1877
MaeI CTAG 2 cut(s) 560, 611
MaeII ACGT 3 cut(s) 819, 1654, 1724
MaeIII GTNAC 2 cut(s) 1288, 1930
MalI GATC 2 cut(s) 33, 1260
MboI GATC 2 cut(s) 31, 1258
MfeI CAATTG 3 cut(s) 297, 474, 782
MflI RGATCY 1 cut(s) 1258
MhlI GDGCHC 2 cut(s) 1233, 2044
MluI ACGCGT 1 cut(s) 1921
MlyI GAGTC 5 cut(s) 896, 942, 1335, 1685, 1775
MmeI TCCRAC 1 cut(s) 24
Mph1103I ATGCAT 1 cut(s) 1870
MroNI GCCGGC 1 cut(s) 1571
MseI TTAA 7 cut(s) 659, 692, 806, 1151, 1418, 1734, 1980
MslI CAYNNNNRTG 2 cut(s) 822, 1655
MspA1I CMGCKG 2 cut(s) 1205, 1347
MspCI CTTAAG 1 cut(s) 1979
MspI CCGG 2 cut(s) 1256, 1572
MspR9I CCNGG 5 cut(s) 584, 952, 1316, 1673, 1752
MunI CAATTG 3 cut(s) 297, 474, 782
Mva1269I GAATGC 1 cut(s) 1522
MvaI CCWGG 5 cut(s) 584, 952, 1316, 1673, 1752
MvnI CGCG 2 cut(s) 1205, 1923
MwoI GCNNNNNNNGC 5 cut(s) 784, 796, 1208, 1865, 1990
NaeI GCCGGC 1 cut(s) 1573
NcoI CCATGG 1 cut(s) 1467
NdeII GATC 2 cut(s) 31, 1258
NgoMIV GCCGGC 1 cut(s) 1571
NlaIII CATG 9 cut(s) 41, 493, 520, 576, 998, 1037, 1471, 1766, 1988
NlaIV GGNNCC 3 cut(s) 27, 1260, 1320
NmuCI GTSAC 1 cut(s) 1288
NsiI ATGCAT 1 cut(s) 1870
NspI RCATGY 2 cut(s) 998, 1988
OliI CACNNNNGTG 1 cut(s) 1655
PagI TCATGA 2 cut(s) 37, 1762
PceI AGGCCT 1 cut(s) 582
PctI GAATGC 1 cut(s) 1522
PdiI GCCGGC 1 cut(s) 1573
PfeI GAWTC 9 cut(s) 170, 328, 439, 523, 569, 908, 1530, 1586, 1646
PflMI CCANNNNNTGG 1 cut(s) 1943
PkrI GCNGC 5 cut(s) 665, 789, 1204, 1349, 1818
PleI GAGTC 5 cut(s) 895, 941, 1335, 1684, 1774
PmaCI CACGTG 2 cut(s) 820, 1655
PmlI CACGTG 2 cut(s) 820, 1655
PpsI GAGTC 5 cut(s) 895, 941, 1335, 1684, 1774
Ppu21I YACGTR 2 cut(s) 820, 1655
PsiI TTATAA 1 cut(s) 1376
Psp6I CCWGG 5 cut(s) 582, 950, 1314, 1671, 1750
PspCI CACGTG 2 cut(s) 820, 1655
PspGI CCWGG 5 cut(s) 582, 950, 1314, 1671, 1750
PspN4I GGNNCC 3 cut(s) 27, 1260, 1320
PspPI GGNCC 2 cut(s) 1474, 1969
PsuI RGATCY 1 cut(s) 1258
PvuII CAGCTG 1 cut(s) 1347
RsaI GTAC 5 cut(s) 61, 838, 1727, 1920, 1977
RsaNI GTAC 5 cut(s) 60, 837, 1726, 1919, 1976
RseI CAYNNNNRTG 2 cut(s) 822, 1655
SacII CCGCGG 1 cut(s) 1206
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 7 cut(s) 659, 692, 806, 1151, 1418, 1734, 1980
SatI GCNGC 5 cut(s) 664, 788, 1203, 1348, 1817
Sau3AI GATC 2 cut(s) 31, 1258
Sau96I GGNCC 2 cut(s) 1474, 1969
ScaI AGTACT 1 cut(s) 1977
SchI GAGTC 5 cut(s) 896, 942, 1335, 1685, 1775
ScrFI CCNGG 5 cut(s) 584, 952, 1316, 1673, 1752
SduI GDGCHC 2 cut(s) 1233, 2044
SfaNI GCATC 6 cut(s) 364, 1364, 1501, 1549, 1814, 1877
SfcI CTRYAG 2 cut(s) 1098, 1800
Sfr303I CCGCGG 1 cut(s) 1206
SgrBI CCGCGG 1 cut(s) 1206
SinI GGWCC 1 cut(s) 1474
SmiMI CAYNNNNRTG 2 cut(s) 822, 1655
SmlI CTYRAG 4 cut(s) 616, 760, 1697, 1979
SmoI CTYRAG 4 cut(s) 616, 760, 1697, 1979
SseBI AGGCCT 1 cut(s) 582
SsiI CCGC 4 cut(s) 1203, 1205, 1534, 1816
SspI AATATT 2 cut(s) 56, 183
SspMI CTAG 2 cut(s) 560, 611
StuI AGGCCT 1 cut(s) 582
StyD4I CCNGG 5 cut(s) 582, 950, 1314, 1671, 1750
StyI CCWWGG 3 cut(s) 675, 1467, 1635
TaaI ACNGT 7 cut(s) 341, 370, 531, 1051, 1432, 1712, 1801
TaiI ACGT 3 cut(s) 822, 1657, 1727
TaqI TCGA 6 cut(s) 5, 590, 596, 747, 906, 1296
TatI WGTACW 3 cut(s) 59, 836, 1975
TauI GCSGC 2 cut(s) 1205, 1819
TfiI GAWTC 9 cut(s) 170, 328, 439, 523, 569, 908, 1530, 1586, 1646
Tru1I TTAA 7 cut(s) 659, 692, 806, 1151, 1418, 1734, 1980
Tru9I TTAA 7 cut(s) 659, 692, 806, 1151, 1418, 1734, 1980
TscAI CASTG 5 cut(s) 25, 166, 849, 1240, 1747
TseFI GTSAC 1 cut(s) 1288
TseI GCWGC 3 cut(s) 663, 787, 1347
Tsp45I GTSAC 1 cut(s) 1288
TspGWI ACGGA 2 cut(s) 792, 1057
TspRI CASTG 5 cut(s) 25, 166, 849, 1240, 1747
Van91I CCANNNNNTGG 1 cut(s) 1943
Vha464I CTTAAG 1 cut(s) 1979
VpaK11BI GGWCC 1 cut(s) 1474
XceI RCATGY 2 cut(s) 998, 1988
XcmI CCANNNNNNNNNTGG 2 cut(s) 1465, 1611
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 2 cut(s) 560, 611
ZrmI AGTACT 1 cut(s) 1977
Zsp2I ATGCAT 1 cut(s) 1870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.