Rh7CG508700

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000129
Physical Location & Seq
Forward (+)
68749163 .. 68758618
9456 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG508700.1

Sequence Viewer

Length: 1854 bp
ATGGAACAAGAGCTCTCCTTCAAATCAGAATCAGCTCCAATTTCCGGCCAAGGTTTCGACTTCGACGCAGGACGTGGCACTTTGGGAGAGGAGCCACTTCATGTCGCCGATGGAGAGGAGCCACTTCATGTCGCCGATGGAGGACTCGAGGAGGTTGGACACCTTGCGGAAGTCGGCGGTGGTGGTGATGGAGAAGACCTGGTGGAGGATGCCGCTGTGCTTGCACTTGCGAACGAGGCAAATGCCCAACCTTCTGAGGTGCTTTTGACACATGAGCATACAGAGTGGAAACGAGTTGATCAAGTGTCACTGCCACTTCCAATGCTTATGAAAGACATTGAACTTTCTGATCCATCATCAAAACCCAGTGATATCATTTATTTTGATAATGAAATTCCAGAGTGGTTCAGCACTATATCTACCAGCAATCCTATATCTATCTCTATACCTCCAGATCTGACAGATGATGACAAGTGGAAGGGGGTTACAATGTGTGCTGTTTTTGCAGTCAAGGGACATACTGTTCTCTCTGTTATTGAATCGGATTTAGAACTTTCAAACTACTTCTATCAGTGCACAATGGAAACTGATGTTTTTCGTATGAAACCATTCATCTTTGACGGGGAAGAAATCCGCCACCTTCGATCAAGTTCTCATCTGGTTTTGATTTCCTATGTAGCTAGATGGCAGTTTCCAAAGTGGGAGTTAAATCAATCAACCATGGTGGCGGCTAAATTTGAAACCAACAATCCATTCATGGAGGTCCAGAAATGTGGGATTCGTCTAGTTTATGAGCAAGATGCTGGATGGTATACCAAACTATTCCCTGGGGTTAATGCGATTTGTCTAAATGAAGTGATGGATGCTATACTGAAAACTGGCTGGCTTAGTCAAGTGGATCAATATTTGAAATGGGAGAAAATTATTCCCCCCATCGAAGAAGACTCCAGTACAGTTCTGCTAAGGAAGAACATCGAGTCTGTTCTTCCTCGATACCTTGAGGCATTGAACCATTATCCTGCAACATACAAATTTAACCTCAGAGGAAGCCCAGCGTGGTTTGAGTCATTTCTCACTGATACAAGGTCAGGGTCGACTCTAGTGTCAATTAAGCTGCCTCAAAATCTACACAAGAGTAAGAAGTGGATGGCATTTGCAATATGCGCATCAATTGCAGAGGAACAGCAAGAGGACTATCATGTTTATTTTAAACTCAAAACGGGTGAATACAATGAGGATCTGTCCCGAGAACTTGAGTACATTGTGGCAATGTCGTCACAAGCAAATCGTTATCAACTTTTGGTTGTGTACATACCGCGGGCATTGATTCCCGAAGTCTTGCTCACTCGGACATCAACAACTGAAATGCACATTTCCTTCAGAGTCGATACTCCTGGTGCAGAAGTTCAAAGAAGTTGCGGCCGTATTGTTTACCAGGAAGATTTAGAAGGGTTTGTTGAAACAATCGTCCGGTGCATGCAAAGAGAAGATACTCTTGAACTTTATGATAAATGGGTGGTAGAAGATTGGATAGACTTGATAGGATTACAAGGGGGTCATTTATGTACTCCAAACAAATGCAATTCCATAACCCGACGGGAAAGGAAGTTTGAATTGCTCTCTCAGAACTCAGAAGTCAGAAATATAGAAATCGGGACTGGGCTGTGTCTCCTCCTTATATTTGCGTCTTCTTTGGAGCTGAAATTTCCAAGTGGAATTGGTTCATGCACTTCAATGAGGGAAACACTGCAAAAATCCAACTGCCTCCTAATTTGTTCTATGATGCTAATTGGATGGGGATTGCTGTATGTGGTTTATGTTGGGCGTCCCACGAAGATTCAAACATTACACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

617

Amino Acids

69.85

Weight (kDa)

4.84

Isoelectric Point (pI)

47.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 130 - 268 1.4e-09 C-JID domain
C-JID PF20160 362 - 482 9.3e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1102
Acc16I TGCGCA 1 cut(s) 1165
AccI GTMKAC 2 cut(s) 812, 1094
AccII CGCG 1 cut(s) 1318
AciI CCGC 8 cut(s) 167, 177, 213, 634, 728, 1316, 1318, 1419
AclWI GGATC 3 cut(s) 344, 906, 1245
AcoI YGGCCR 2 cut(s) 46, 1420
AcsI RAATTY 4 cut(s) 393, 734, 1031, 1703
AcuI CTGAAG 1 cut(s) 1363
AcyI GRCGYC 1 cut(s) 1825
AfaI GTAC 4 cut(s) 952, 1259, 1310, 1567
AfiI CCNNNNNNNGG 2 cut(s) 44, 205
AjiI CACGTC 1 cut(s) 74
AjnI CCWGG 4 cut(s) 198, 826, 1393, 1434
AjuI GAANNNNNNNTTGG 2 cut(s) 737, 769
AloI GAACNNNNNNTCC 2 cut(s) 507, 539
AluBI AGCT 5 cut(s) 13, 35, 680, 1114, 1699
AluI AGCT 5 cut(s) 13, 35, 680, 1114, 1699
Alw21I GWGCWC 2 cut(s) 15, 578
Alw26I GTCTC 1 cut(s) 1673
Alw44I GTGCAC 1 cut(s) 574
AlwI GGATC 3 cut(s) 344, 906, 1245
Ama87I CYCGRG 2 cut(s) 146, 1245
AoxI GGCC 2 cut(s) 46, 1420
ApaLI GTGCAC 1 cut(s) 574
ApeKI GCWGC 1 cut(s) 1114
ApoI RAATTY 4 cut(s) 393, 734, 1031, 1703
Asp700I GAANNNNTTC 2 cut(s) 608, 1720
AspLEI GCGC 1 cut(s) 1166
AspS9I GGNCC 1 cut(s) 763
AsuHPI GGTGA 2 cut(s) 197, 1235
AvaI CYCGRG 2 cut(s) 146, 1245
AvaII GGWCC 1 cut(s) 763
BaeGI GKGCMC 1 cut(s) 578
BanII GRGCYC 1 cut(s) 15
BbsI GAAGAC 3 cut(s) 201, 948, 1680
Bbv12I GWGCWC 2 cut(s) 15, 578
BbvI GCAGC 1 cut(s) 1101
BceAI ACGGC 1 cut(s) 1407
BcgI CGANNNNNNTGC 2 cut(s) 224, 258
BciT130I CCWGG 4 cut(s) 200, 828, 1395, 1436
BclI TGATCA 1 cut(s) 298
BcoDI GTCTC 1 cut(s) 1673
BfaI CTAG 4 cut(s) 681, 785, 1100, 1852
BglII AGATCT 1 cut(s) 454
BisI GCNGC 4 cut(s) 213, 729, 1115, 1420
BlsI GCNGC 4 cut(s) 214, 730, 1116, 1421
Bme1390I CCNGG 4 cut(s) 200, 828, 1395, 1436
Bme18I GGWCC 1 cut(s) 763
BmeT110I CYCGRG 2 cut(s) 146, 1245
BmgBI CACGTC 1 cut(s) 74
BmgT120I GGNCC 1 cut(s) 763
BmiI GGNNCC 2 cut(s) 93, 120
BmrFI CCNGG 4 cut(s) 200, 828, 1395, 1436
BmrI ACTGGG 2 cut(s) 360, 1668
BmsI GCATC 5 cut(s) 199, 790, 853, 1175, 1773
BmuI ACTGGG 2 cut(s) 360, 1668
BpiI GAAGAC 3 cut(s) 201, 948, 1680
BpmI CTGGAG 2 cut(s) 435, 931
Bpu10I CCTNAGC 1 cut(s) 962
BpuEI CTTGAG 2 cut(s) 1019, 1274
BsaHI GRCGYC 1 cut(s) 1825
BsaJI CCNNGG 5 cut(s) 49, 720, 826, 827, 1316
BsaWI WCCGGW 1 cut(s) 1470
Bsc4I CCNNNNNNNGG 2 cut(s) 44, 205
Bse1I ACTGG 4 cut(s) 366, 883, 948, 1663
Bse3DI GCAATG 1 cut(s) 1275
BseBI CCWGG 4 cut(s) 200, 828, 1395, 1436
BseDI CCNNGG 5 cut(s) 49, 720, 826, 827, 1316
BseGI GGATG 5 cut(s) 214, 812, 868, 1152, 1799
BseLI CCNNNNNNNGG 2 cut(s) 44, 205
BseMI GCAATG 1 cut(s) 1275
BseMII CTCAG 4 cut(s) 246, 1054, 1637, 1644
BseNI ACTGG 4 cut(s) 366, 883, 948, 1663
BseRI GAGGAG 4 cut(s) 104, 131, 164, 1661
BseSI GKGCMC 1 cut(s) 578
BseX3I CGGCCG 1 cut(s) 1420
BseXI GCAGC 1 cut(s) 1101
BseYI CCCAGC 1 cut(s) 1051
BsgI GTGCAG 1 cut(s) 1419
Bsh1236I CGCG 1 cut(s) 1318
Bsh1285I CGRYCG 1 cut(s) 1423
BshFI GGCC 2 cut(s) 48, 1422
BsiEI CGRYCG 1 cut(s) 1423
BsiHKAI GWGCWC 2 cut(s) 15, 578
BsiHKCI CYCGRG 2 cut(s) 146, 1245
BsiSI CCGG 2 cut(s) 45, 1471
BslFI GGGAC 4 cut(s) 528, 1228, 1669, 1812
BslI CCNNNNNNNGG 2 cut(s) 44, 205
BsmAI GTCTC 1 cut(s) 1673
BsmFI GGGAC 4 cut(s) 528, 1228, 1669, 1812
BsnI GGCC 2 cut(s) 48, 1422
BsoBI CYCGRG 2 cut(s) 146, 1245
Bsp1286I GDGCHC 2 cut(s) 15, 578
Bsp1407I TGTACA 1 cut(s) 1308
Bsp143I GATC 6 cut(s) 298, 349, 454, 644, 898, 1237
Bsp19I CCATGG 1 cut(s) 720
BspACI CCGC 8 cut(s) 167, 177, 213, 634, 728, 1316, 1318, 1419
BspANI GGCC 2 cut(s) 48, 1422
BspCNI CTCAG 4 cut(s) 247, 1053, 1636, 1643
BspFNI CGCG 1 cut(s) 1318
BspLI GGNNCC 2 cut(s) 93, 120
BspPI GGATC 3 cut(s) 344, 906, 1245
BsrDI GCAATG 1 cut(s) 1275
BsrGI TGTACA 1 cut(s) 1308
BsrI ACTGG 4 cut(s) 366, 883, 948, 1663
BssECI CCNNGG 5 cut(s) 49, 720, 826, 827, 1316
BssMI GATC 6 cut(s) 298, 349, 454, 644, 898, 1237
BssNAI GTATAC 1 cut(s) 813
BssNI GRCGYC 1 cut(s) 1825
BssT1I CCWWGG 2 cut(s) 49, 720
Bst1107I GTATAC 1 cut(s) 813
Bst2UI CCWGG 4 cut(s) 200, 828, 1395, 1436
Bst4CI ACNGT 2 cut(s) 523, 955
BstACI GRCGYC 1 cut(s) 1825
BstAPI GCANNNNNTGC 1 cut(s) 1172
BstAUI TGTACA 1 cut(s) 1308
BstC8I GCNNGC 4 cut(s) 222, 884, 1320, 1478
BstDEI CTNAG 6 cut(s) 255, 887, 962, 1040, 1623, 1630
BstDSI CCRYGG 2 cut(s) 720, 1316
BstENI CCTNNNNNAGG 1 cut(s) 203
BstF5I GGATG 5 cut(s) 214, 812, 868, 1152, 1799
BstFNI CGCG 1 cut(s) 1318
BstHHI GCGC 1 cut(s) 1166
BstKTI GATC 6 cut(s) 301, 352, 457, 647, 901, 1240
BstMAI GTCTC 1 cut(s) 1673
BstMBI GATC 6 cut(s) 298, 349, 454, 644, 898, 1237
BstMCI CGRYCG 1 cut(s) 1423
BstMWI GCNNNNNNNGC 5 cut(s) 221, 236, 503, 1163, 1172
BstNI CCWGG 4 cut(s) 200, 828, 1395, 1436
BstNSI RCATGY 1 cut(s) 1480
BstSCI CCNGG 4 cut(s) 198, 826, 1393, 1434
BstSLI GKGCMC 1 cut(s) 578
BstUI CGCG 1 cut(s) 1318
BstV1I GCAGC 1 cut(s) 1101
BstV2I GAAGAC 3 cut(s) 201, 948, 1680
BstX2I RGATCY 2 cut(s) 454, 1237
BstXI CCANNNNNNTGG 1 cut(s) 773
BstYI RGATCY 2 cut(s) 454, 1237
BstZ17I GTATAC 1 cut(s) 813
BstZI CGGCCG 1 cut(s) 1420
BsuRI GGCC 2 cut(s) 48, 1422
BtgI CCRYGG 2 cut(s) 720, 1316
BtrI CACGTC 1 cut(s) 74
BtsCI GGATG 5 cut(s) 214, 812, 868, 1152, 1799
BtsI GCAGTG 2 cut(s) 308, 1745
BtsIMutI CAGTG 5 cut(s) 308, 373, 578, 1074, 1745
Cac8I GCNNGC 4 cut(s) 222, 884, 1320, 1478
CfoI GCGC 1 cut(s) 1166
Cfr13I GGNCC 1 cut(s) 763
Cfr42I CCGCGG 1 cut(s) 1319
CseI GACGC 3 cut(s) 74, 1674, 1814
CsiI ACCWGGT 1 cut(s) 198
Csp6I GTAC 4 cut(s) 951, 1258, 1309, 1566
CspCI CAANNNNNGTGG 2 cut(s) 705, 740
CviAII CATG 8 cut(s) 101, 128, 272, 721, 757, 1199, 1477, 1725
CviQI GTAC 4 cut(s) 951, 1258, 1309, 1566
DdeI CTNAG 6 cut(s) 255, 887, 962, 1040, 1623, 1630
DpnI GATC 6 cut(s) 300, 351, 456, 646, 900, 1239
DpnII GATC 6 cut(s) 298, 349, 454, 644, 898, 1237
DraI TTTAAA 1 cut(s) 1210
DrdI GACNNNNNNGTC 1 cut(s) 1102
DseDI GACNNNNNNGTC 1 cut(s) 1102
EaeI YGGCCR 2 cut(s) 46, 1420
EagI CGGCCG 1 cut(s) 1420
EciI GGCGGA 1 cut(s) 623
Ecl136II GAGCTC 1 cut(s) 13
EclXI CGGCCG 1 cut(s) 1420
Eco130I CCWWGG 2 cut(s) 49, 720
Eco24I GRGCYC 1 cut(s) 15
Eco32I GATATC 1 cut(s) 373
Eco47I GGWCC 1 cut(s) 763
Eco52I CGGCCG 1 cut(s) 1420
Eco53kI GAGCTC 1 cut(s) 13
Eco57I CTGAAG 1 cut(s) 1363
Eco88I CYCGRG 2 cut(s) 146, 1245
EcoICRI GAGCTC 1 cut(s) 13
EcoNI CCTNNNNNAGG 1 cut(s) 203
EcoRII CCWGG 4 cut(s) 198, 826, 1393, 1434
EcoRV GATATC 1 cut(s) 373
EcoT14I CCWWGG 2 cut(s) 49, 720
EcoT38I GRGCYC 1 cut(s) 15
ErhI CCWWGG 2 cut(s) 49, 720
FaeI CATG 8 cut(s) 104, 131, 275, 724, 760, 1202, 1480, 1728
FalI AAGNNNNNCTT 2 cut(s) 1479, 1511
FaqI GGGAC 4 cut(s) 528, 1228, 1669, 1812
FatI CATG 8 cut(s) 100, 127, 271, 720, 756, 1198, 1476, 1724
FauI CCCGC 1 cut(s) 1311
FbaI TGATCA 1 cut(s) 298
FblI GTMKAC 2 cut(s) 812, 1094
Fnu4HI GCNGC 4 cut(s) 213, 729, 1115, 1420
FokI GGATG 5 cut(s) 221, 819, 875, 1159, 1806
FriOI GRGCYC 1 cut(s) 15
Fsp4HI GCNGC 4 cut(s) 213, 729, 1115, 1420
FspAI RTGCGCAY 1 cut(s) 1165
FspBI CTAG 4 cut(s) 681, 785, 1100, 1852
FspI TGCGCA 1 cut(s) 1165
GlaI GCGC 1 cut(s) 1165
GluI GCNGC 4 cut(s) 213, 729, 1115, 1420
GsaI CCCAGC 1 cut(s) 1055
GsuI CTGGAG 2 cut(s) 435, 931
HaeIII GGCC 2 cut(s) 48, 1422
HapII CCGG 2 cut(s) 45, 1471
HgaI GACGC 3 cut(s) 74, 1674, 1814
HhaI GCGC 1 cut(s) 1166
Hin1I GRCGYC 1 cut(s) 1825
Hin1II CATG 8 cut(s) 104, 131, 275, 724, 760, 1202, 1480, 1728
Hin6I GCGC 1 cut(s) 1164
HinP1I GCGC 1 cut(s) 1164
HincII GTYRAC 1 cut(s) 1095
HindII GTYRAC 1 cut(s) 1095
HpaII CCGG 2 cut(s) 45, 1471
HphI GGTGA 2 cut(s) 197, 1235
Hpy166II GTNNAC 5 cut(s) 576, 813, 1095, 1309, 1432
Hpy188III TCNNGA 7 cut(s) 398, 452, 766, 1245, 1331, 1496, 1654
Hpy8I GTNNAC 5 cut(s) 576, 813, 1095, 1309, 1432
Hpy99I CGWCG 2 cut(s) 68, 1599
HpyAV CCTTC 6 cut(s) 28, 261, 472, 650, 1387, 1442
HpyCH4III ACNGT 2 cut(s) 523, 955
HpyCH4IV ACGT 1 cut(s) 73
HpyF10VI GCNNNNNNNGC 5 cut(s) 221, 236, 503, 1163, 1172
HpyF3I CTNAG 6 cut(s) 255, 887, 962, 1040, 1623, 1630
HpySE526I ACGT 1 cut(s) 73
Hsp92I GRCGYC 1 cut(s) 1825
Hsp92II CATG 8 cut(s) 104, 131, 275, 724, 760, 1202, 1480, 1728
HspAI GCGC 1 cut(s) 1164
Ksp22I TGATCA 1 cut(s) 298
KspI CCGCGG 1 cut(s) 1319
Kzo9I GATC 6 cut(s) 298, 349, 454, 644, 898, 1237
LmnI GCTCC 4 cut(s) 40, 91, 118, 1696
Lsp1109I GCAGC 1 cut(s) 1101
LweI GCATC 5 cut(s) 199, 790, 853, 1175, 1773
MabI ACCWGGT 1 cut(s) 198
MaeI CTAG 4 cut(s) 681, 785, 1100, 1852
MaeII ACGT 1 cut(s) 73
MaeIII GTNAC 3 cut(s) 306, 484, 1275
MalI GATC 6 cut(s) 300, 351, 456, 646, 900, 1239
MboI GATC 6 cut(s) 298, 349, 454, 644, 898, 1237
MfeI CAATTG 1 cut(s) 1170
MflI RGATCY 2 cut(s) 454, 1237
MhlI GDGCHC 2 cut(s) 15, 578
MlyI GAGTC 6 cut(s) 138, 938, 986, 1073, 1090, 1392
MmeI TCCRAC 2 cut(s) 136, 1782
MroXI GAANNNNTTC 2 cut(s) 608, 1720
MseI TTAA 5 cut(s) 707, 834, 1035, 1110, 1209
MslI CAYNNNNRTG 1 cut(s) 1733
MspA1I CMGCKG 2 cut(s) 215, 1318
MspI CCGG 2 cut(s) 45, 1471
MspR9I CCNGG 4 cut(s) 200, 828, 1395, 1436
MunI CAATTG 1 cut(s) 1170
MvaI CCWGG 4 cut(s) 200, 828, 1395, 1436
MvnI CGCG 1 cut(s) 1318
MwoI GCNNNNNNNGC 5 cut(s) 221, 236, 503, 1163, 1172
NcoI CCATGG 1 cut(s) 720
NdeII GATC 6 cut(s) 298, 349, 454, 644, 898, 1237
NlaIII CATG 8 cut(s) 104, 131, 275, 724, 760, 1202, 1480, 1728
NlaIV GGNNCC 2 cut(s) 93, 120
NmuCI GTSAC 2 cut(s) 306, 1275
NsbI TGCGCA 1 cut(s) 1165
NspI RCATGY 1 cut(s) 1480
PaeI GCATGC 1 cut(s) 1480
PaeR7I CTCGAG 1 cut(s) 146
PasI CCCWGGG 1 cut(s) 827
PdmI GAANNNNTTC 2 cut(s) 608, 1720
PfeI GAWTC 5 cut(s) 29, 539, 778, 1327, 1837
PkrI GCNGC 4 cut(s) 214, 730, 1116, 1421
PleI GAGTC 6 cut(s) 138, 938, 985, 1072, 1090, 1391
PpsI GAGTC 6 cut(s) 138, 938, 985, 1072, 1090, 1391
Psp124BI GAGCTC 1 cut(s) 15
Psp6I CCWGG 4 cut(s) 198, 826, 1393, 1434
PspFI CCCAGC 1 cut(s) 1051
PspGI CCWGG 4 cut(s) 198, 826, 1393, 1434
PspN4I GGNNCC 2 cut(s) 93, 120
PspPI GGNCC 1 cut(s) 763
PspXI VCTCGAGB 1 cut(s) 146
PsuI RGATCY 2 cut(s) 454, 1237
RsaI GTAC 4 cut(s) 952, 1259, 1310, 1567
RsaNI GTAC 4 cut(s) 951, 1258, 1309, 1566
RseI CAYNNNNRTG 1 cut(s) 1733
SacI GAGCTC 1 cut(s) 15
SacII CCGCGG 1 cut(s) 1319
SalI GTCGAC 1 cut(s) 1093
SaqAI TTAA 5 cut(s) 707, 834, 1035, 1110, 1209
SatI GCNGC 4 cut(s) 213, 729, 1115, 1420
Sau3AI GATC 6 cut(s) 298, 349, 454, 644, 898, 1237
Sau96I GGNCC 1 cut(s) 763
SchI GAGTC 6 cut(s) 138, 938, 986, 1073, 1090, 1392
ScrFI CCNGG 4 cut(s) 200, 828, 1395, 1436
SduI GDGCHC 2 cut(s) 15, 578
SexAI ACCWGGT 1 cut(s) 198
SfaNI GCATC 5 cut(s) 199, 790, 853, 1175, 1773
Sfr274I CTCGAG 1 cut(s) 146
Sfr303I CCGCGG 1 cut(s) 1319
SgrBI CCGCGG 1 cut(s) 1319
SinI GGWCC 1 cut(s) 763
SlaI CTCGAG 1 cut(s) 146
SmiMI CAYNNNNRTG 1 cut(s) 1733
SmlI CTYRAG 3 cut(s) 146, 998, 1253
SmoI CTYRAG 3 cut(s) 146, 998, 1253
SphI GCATGC 1 cut(s) 1480
SsiI CCGC 8 cut(s) 167, 177, 213, 634, 728, 1316, 1318, 1419
SspI AATATT 1 cut(s) 905
SspMI CTAG 4 cut(s) 681, 785, 1100, 1852
SstI GAGCTC 1 cut(s) 15
StyD4I CCNGG 4 cut(s) 198, 826, 1393, 1434
StyI CCWWGG 2 cut(s) 49, 720
TaaI ACNGT 2 cut(s) 523, 955
TaiI ACGT 1 cut(s) 76
TaqI TCGA 9 cut(s) 57, 63, 147, 643, 936, 975, 991, 1094, 1386
TatI WGTACW 4 cut(s) 950, 1257, 1308, 1565
TauI GCSGC 3 cut(s) 215, 731, 1422
TfiI GAWTC 5 cut(s) 29, 539, 778, 1327, 1837
Tru1I TTAA 5 cut(s) 707, 834, 1035, 1110, 1209
Tru9I TTAA 5 cut(s) 707, 834, 1035, 1110, 1209
TscAI CASTG 5 cut(s) 315, 373, 578, 1081, 1752
TseFI GTSAC 2 cut(s) 306, 1275
TseI GCWGC 1 cut(s) 1114
Tsp45I GTSAC 2 cut(s) 306, 1275
TspDTI ATGAA 9 cut(s) 89, 116, 344, 405, 601, 617, 745, 867, 1713
TspRI CASTG 5 cut(s) 315, 373, 578, 1081, 1752
VneI GTGCAC 1 cut(s) 574
VpaK11BI GGWCC 1 cut(s) 763
XagI CCTNNNNNAGG 1 cut(s) 203
XapI RAATTY 4 cut(s) 393, 734, 1031, 1703
XceI RCATGY 1 cut(s) 1480
XhoI CTCGAG 1 cut(s) 146
XmiI GTMKAC 2 cut(s) 812, 1094
XmnI GAANNNNTTC 2 cut(s) 608, 1720
XspI CTAG 4 cut(s) 681, 785, 1100, 1852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.