RLG00000000673

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000129
Physical Location & Seq
Reverse (-)
3587495 .. 3593174
5680 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000673

Sequence Viewer

Length: 2796 bp
ATGGGGCAAACAGTCCTCCCTGTGTTCTATGATGTTAAGCCGTTTGAGGAATTGGGTTGGGAAGTTGTTCGCGAAGAATGCCATGATGAACCGGGAAAACGTAGCAGGTTGTGGCTTCCCAATGAAATCGTCCATGTACTTCGTCATAGTAAGGCGACGAGTGCAATTCAAAGCATATCCCTCCAATGTCCAACAGGAGACAATGGATGGAGCATGCTACGACATTTAGATCTGAGTGGTTCACCATACTTGAAGTCGACTCCAGACTTCACTGAGGTTCCAGATCTTGAAAAGTTGGTGCTTCAATTTTGTACGAGCTTGGTGGAGGTTCACCCATCTCTTGGATCTCTGAAGAAACTTGTCTCTTTGAATATGACACATTGCGAGTCTGTTGAGAGCATTCCACCTTTCACTGCCCTTGAATTCCTTCAAATATTAAGGCTTTCATCCTGTTCAGCACTGAAGAAGTTTCCAGAAATTGAAGGAAATATGAAAAGCTTGCTGGAGCTTCATTTGGATGGGACCAGCATTGAGGAATTGCCTCCATCAATTGAACGCTTGACTGGTCTGACCATGTTGGATCTAACAGACTGTAAAAACCTTTTGCATCTACCCAATACCATTGGGTGCTTGACATCTTTGAAAAGTCTCTATCTAGCAGGTTGCTCCAAAATTGATGAGATGCCTGAGAATCTGAGTGGTATTAAATGTCTGGAGAAGCTTTTCATTGGTGGAACTTGCATAAGGGAGTTATCTTTCATTGTAGGCATGAAGCATCTACAGTATCTATCCTGCCGAGGATGTAAATGTTTAGTTTCAGAATCATGGAAAGGTCTGTCTTCGTTATCGAGTTTGATAGAGCTAGACTTGAGTTATTGCAATCTGATCGATGGAGCAATTCTCAATGATCTTAGCAGCCTAATCTCCTTAAGAAGGTTGGATTTAAGTGGTAATTGTTTTTTGCAGATATCTTCCAGTTCAAATTTCACTTTCCAACTTCCAAGAGATGAAATTCCAGAGTGGTTCAGCGCTATATCTACCAGAAATCCCATATTAATCCCCATACCTCAAAATCTGACCGATGATAACAAGTGGAAGGGATTTGCCGCGTGTGCTATATTCTCAGTCAGGGGGCATACTGCTCTCTCCCTTATTGAACCGGATCCTGATTTTCTTAATTACTCGTATCAAATCACATTGGAAACTGATGTTGTGCGCCTGGAACCATATGTGTTGGAGTGGGATGAATCCCTCCGCCGCTTTGGATCAAGTTCTCATCTGCTTATGATTTTCTATATATCTAGTTTGACATTTCCACAGTGGCGGTTAAATAAATCAACTGTGGTGAGTGCTATGTTTGAAACCACCAATCCATCCATGGTGGTCAAGAAATGTGGAATTCGTCTAGTCTATGAGCAAGATGCTAGATGGTTAGCCAGAATAGTCGGTGGGGATCAAATGATTTGGCTGAATAAAGTTGAGGACGCCTCTGTATTGGAGTCTGGCTGGCTTAGTGAATCTGAGAAATGGGAGAAATTCATTCCACCCTTGGAAGAAGAATCCACAGTTATTGTGCAGAGAAAGAACCTCGAGTCTGTTCTTCCAAGATATCTTGAGGCGCTAAACCGTTATTCTGCAACGTACAAATTTAACCTCAGAGGAAGCCCAGGGTGGTTTGGGTCGATTTGCCCTGATATGATGAGGTCAAATTTGGCCAGAGTGTCAATTGAGCTGCCTCAAAATCTACACAAGAGCAAGAAGTGGATGGGATTTGCAATATACTTATCACTTGTAGAGGAAGCGGGGCAGACAATGAACAAAGAGGACTTCTATTTGGTATTGGTTACACTAACAACTGGGGATGAATCTGCAGGTAGTACGGTGTCCCAAGAACTTATGCACGTCATGCCATTGTCAGAAGAACATCATCAACTTTTGGTTATTTACATGCCGCGGGCACAGATTCCCGAAGCGTTGTTCACTCAGACATTAACAACTGCAATGGACTTTTGCATCACTATCGTTAGCCCTCATGTAAAGGTTCAAAGAAGTGGGTTCCGTATTGTGTACCAGGAAGATATACAAGGGTTTGCTGATACAATTATCCAGTGCATGCAGAGGCAAGATTCTCTAAAATCTCACAATAAGTTGGTGGTAGAAGAATGGATACAGTTGATGCAACTGCAAGGTGCCACCATAGAGAGAATGACAGAACGGGATTCCAGAACCCCACGGGAAAAACAATTTGAATTGCACTTAAAAAAATATAGAAATTGGGACTGGTCTGACCCTCGTCCTGTTTATTGTCACTTCGAGGGAGCTGAAATTTTCAAGTTGAAATGGTTCATGCCTTTCATCAACCAAGGCAACTCTGCAGAAATCCAACTGCCTCTGAATGTGTTCGATGATGATAATTGGTTGGGGTTTGCCGTATGTTCACAGTTGTCCCGCGACCAATATCCAAACATTAGTCATGGCAGTATTGCTCTCAATTCAGAGAATGTTTGGCTTGTTTATCGTCTGGACTCTGATGTTGTTTGGCACGGCTTATTTGATTACAGGATGCAAGCAGAGATTAATATACTCGAGCCATCAGAATACTATGCTACTAGTTTCCATTATATACCGCGCACTTCGGTTCTTAGTAAGATGTGGAGGCAATGCAAATTGGCCAGGATAACCATGTGGTTTTCTAGCCGCACATGCTCAGCTGTGCATAGTTGTGCCCTTCGTTTACTATTTAAGGAGGACGTTGAACATCTTGTAGAAACACTGACTCTAGCAGAATTACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

932

Amino Acids

106.45

Weight (kDa)

5.51

Isoelectric Point (pI)

50.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 122 - 263 2.6e-13 Leucine-rich repeat region
LRR_13 PF23286 142 - 227 4.3e-10 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 223 - 316 2.8e-06 Leucine-rich repeat region
C-JID PF20160 333 - 475 2e-09 C-JID domain
C-JID PF20160 781 - 919 1.3e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 96, 650, 1862
AccB1I GGYRCC 1 cut(s) 2189
AccB7I CCANNNNNTGG 1 cut(s) 341
AccI GTMKAC 1 cut(s) 257
AccII CGCG 5 cut(s) 72, 1109, 1954, 2451, 2629
AclWI GGATC 6 cut(s) 352, 588, 1157, 1170, 1273, 1461
AcoI YGGCCR 2 cut(s) 1713, 2670
AcsI RAATTY 8 cut(s) 422, 982, 1011, 1398, 1535, 1646, 1708, 2325
AcuI CTGAAG 2 cut(s) 371, 482
AcyI GRCGYC 1 cut(s) 1485
AfaI GTAC 5 cut(s) 138, 313, 1643, 1879, 2069
AfeI AGCGCT 1 cut(s) 1030
AfiI CCNNNNNNNGG 2 cut(s) 341, 933
AflII CTTAAG 1 cut(s) 928
AhlI ACTAGT 1 cut(s) 2609
AjiI CACGTC 1 cut(s) 1903
AjnI CCWGG 4 cut(s) 1218, 1666, 2070, 2672
AluBI AGCT 8 cut(s) 318, 498, 508, 721, 862, 1732, 2321, 2711
AluI AGCT 8 cut(s) 318, 498, 508, 721, 862, 1732, 2321, 2711
Alw26I GTCTC 3 cut(s) 192, 367, 653
AlwI GGATC 6 cut(s) 352, 588, 1157, 1170, 1273, 1461
Ama87I CYCGRG 2 cut(s) 1589, 2585
Aor51HI AGCGCT 1 cut(s) 1030
AoxI GGCC 2 cut(s) 1713, 2670
ApeKI GCWGC 2 cut(s) 915, 1732
ApoI RAATTY 8 cut(s) 422, 982, 1011, 1398, 1535, 1646, 1708, 2325
AseI ATTAAT 2 cut(s) 1055, 2577
Asp700I GAANNNNTTC 5 cut(s) 66, 426, 722, 2342, 2399
AspLEI GCGC 4 cut(s) 1031, 1218, 1621, 2631
AspS9I GGNCC 1 cut(s) 522
AsuC2I CCSGG 1 cut(s) 93
AsuHPI GGTGA 3 cut(s) 234, 323, 1357
AvaI CYCGRG 2 cut(s) 1589, 2585
AvaII GGWCC 1 cut(s) 522
BaeGI GKGCMC 2 cut(s) 1960, 2728
BalI TGGCCA 2 cut(s) 1715, 2672
BamHI GGATCC 1 cut(s) 1162
BanI GGYRCC 1 cut(s) 2189
BarI GAAGNNNNNNTAC 2 cut(s) 2151, 2183
BbsI GAAGAC 1 cut(s) 831
BbvI GCAGC 2 cut(s) 927, 1719
BccI CCATC 9 cut(s) 201, 343, 512, 553, 884, 1381, 1422, 1759, 2599
BceAI ACGGC 3 cut(s) 25, 2414, 2560
BcgI CGANNNNNNTGC 4 cut(s) 868, 902, 2002, 2036
BciT130I CCWGG 4 cut(s) 1220, 1668, 2072, 2674
BciVI GTATCC 1 cut(s) 2160
BcnI CCSGG 1 cut(s) 93
BcoDI GTCTC 3 cut(s) 192, 367, 653
BcuI ACTAGT 1 cut(s) 2609
BfaI CTAG 8 cut(s) 656, 863, 1302, 1406, 1425, 2610, 2694, 2780
BfmI CTRYAG 3 cut(s) 779, 1869, 2373
BfoI RGCGCY 2 cut(s) 1032, 1622
BfrI CTTAAG 1 cut(s) 928
BfuAI ACCTGC 3 cut(s) 96, 650, 1862
BfuI GTATCC 1 cut(s) 2160
BglII AGATCT 2 cut(s) 229, 283
BisI GCNGC 6 cut(s) 916, 1107, 1258, 1733, 1952, 2698
BlpI GCTNAGC 1 cut(s) 2707
BlsI GCNGC 6 cut(s) 917, 1108, 1259, 1734, 1953, 2699
Bme1390I CCNGG 5 cut(s) 93, 1220, 1668, 2072, 2674
Bme18I GGWCC 1 cut(s) 522
BmeT110I CYCGRG 2 cut(s) 1589, 2585
BmgBI CACGTC 1 cut(s) 1903
BmgT120I GGNCC 1 cut(s) 522
BmiI GGNNCC 6 cut(s) 279, 523, 1164, 1224, 2057, 2191
BmrFI CCNGG 5 cut(s) 93, 1220, 1668, 2072, 2674
BmrI ACTGGG 1 cut(s) 1866
BmsI GCATC 7 cut(s) 616, 672, 784, 1411, 2022, 2166, 2553
BmuI ACTGGG 1 cut(s) 1866
BoxI GACNNNNGTC 1 cut(s) 2292
BpiI GAAGAC 1 cut(s) 831
BplI GAGNNNNNCTC 4 cut(s) 885, 917, 1472, 1504
BpmI CTGGAG 3 cut(s) 246, 524, 734
Bpu1102I GCTNAGC 1 cut(s) 2707
BpuEI CTTGAG 2 cut(s) 889, 1634
BpuMI CCSGG 1 cut(s) 93
Bsa29I ATCGAT 1 cut(s) 888
BsaHI GRCGYC 1 cut(s) 1485
BsaJI CCNNGG 8 cut(s) 796, 1377, 1548, 1666, 1667, 1952, 2231, 2362
BsaWI WCCGGW 1 cut(s) 1159
Bsc4I CCNNNNNNNGG 2 cut(s) 341, 933
Bse1I ACTGG 5 cut(s) 568, 975, 1861, 2107, 2285
Bse3DI GCAATG 3 cut(s) 379, 2007, 2666
BseBI CCWGG 4 cut(s) 1220, 1668, 2072, 2674
BseCI ATCGAT 1 cut(s) 888
BseDI CCNNGG 8 cut(s) 796, 1377, 1548, 1666, 1667, 1952, 2231, 2362
BseGI GGATG 9 cut(s) 212, 446, 523, 806, 1249, 1373, 1770, 1867, 2568
BseLI CCNNNNNNNGG 2 cut(s) 341, 933
BseMI GCAATG 3 cut(s) 379, 2007, 2666
BseMII CTCAG 9 cut(s) 224, 264, 678, 686, 1137, 1512, 1669, 1997, 2721
BseNI ACTGG 5 cut(s) 568, 975, 1861, 2107, 2285
BseSI GKGCMC 2 cut(s) 1960, 2728
BseXI GCAGC 2 cut(s) 927, 1719
BsgI GTGCAG 1 cut(s) 1595
Bsh1236I CGCG 5 cut(s) 72, 1109, 1954, 2451, 2629
BshFI GGCC 2 cut(s) 1715, 2672
BshNI GGYRCC 1 cut(s) 2189
BshVI ATCGAT 1 cut(s) 888
BsiHKCI CYCGRG 2 cut(s) 1589, 2585
BsiSI CCGG 2 cut(s) 92, 1160
BslFI GGGAC 4 cut(s) 535, 1870, 2291, 2431
BslI CCNNNNNNNGG 2 cut(s) 341, 933
BsmAI GTCTC 3 cut(s) 192, 367, 653
BsmFI GGGAC 4 cut(s) 535, 1870, 2291, 2431
BsmI GAATGC 2 cut(s) 83, 399
BsnI GGCC 2 cut(s) 1715, 2672
BsoBI CYCGRG 2 cut(s) 1589, 2585
Bsp1286I GDGCHC 2 cut(s) 1960, 2728
Bsp143I GATC 9 cut(s) 229, 283, 344, 580, 885, 907, 1162, 1265, 1453
Bsp1720I GCTNAGC 1 cut(s) 2707
Bsp19I CCATGG 1 cut(s) 1377
Bsp68I TCGCGA 1 cut(s) 72
BspANI GGCC 2 cut(s) 1715, 2672
BspCNI CTCAG 9 cut(s) 225, 265, 679, 687, 1136, 1513, 1668, 1996, 2720
BspDI ATCGAT 1 cut(s) 888
BspFNI CGCG 5 cut(s) 72, 1109, 1954, 2451, 2629
BspLI GGNNCC 6 cut(s) 279, 523, 1164, 1224, 2057, 2191
BspMAI CTGCAG 2 cut(s) 1873, 2377
BspMI ACCTGC 3 cut(s) 96, 650, 1862
BspPI GGATC 6 cut(s) 352, 588, 1157, 1170, 1273, 1461
BspT107I GGYRCC 1 cut(s) 2189
BspTI CTTAAG 1 cut(s) 928
BsrDI GCAATG 3 cut(s) 379, 2007, 2666
BsrI ACTGG 5 cut(s) 568, 975, 1861, 2107, 2285
BssECI CCNNGG 8 cut(s) 796, 1377, 1548, 1666, 1667, 1952, 2231, 2362
BssMI GATC 9 cut(s) 229, 283, 344, 580, 885, 907, 1162, 1265, 1453
BssNI GRCGYC 1 cut(s) 1485
BssT1I CCWWGG 3 cut(s) 1377, 1548, 2362
Bst2UI CCWGG 4 cut(s) 1220, 1668, 2072, 2674
BstACI GRCGYC 1 cut(s) 1485
BstAFI CTTAAG 1 cut(s) 928
BstAPI GCANNNNNTGC 1 cut(s) 1906
BstC8I GCNNGC 6 cut(s) 215, 500, 1508, 1956, 2114, 2568
BstDSI CCRYGG 3 cut(s) 1377, 1952, 2231
BstENI CCTNNNNNAGG 1 cut(s) 931
BstF5I GGATG 9 cut(s) 212, 446, 523, 806, 1249, 1373, 1770, 1867, 2568
BstFNI CGCG 5 cut(s) 72, 1109, 1954, 2451, 2629
BstH2I RGCGCY 2 cut(s) 1032, 1622
BstHHI GCGC 4 cut(s) 1031, 1218, 1621, 2631
BstKTI GATC 9 cut(s) 232, 286, 347, 583, 888, 910, 1165, 1268, 1456
BstMAI GTCTC 3 cut(s) 192, 367, 653
BstMBI GATC 9 cut(s) 229, 283, 344, 580, 885, 907, 1162, 1265, 1453
BstMWI GCNNNNNNNGC 5 cut(s) 78, 161, 1112, 1906, 2703
BstNI CCWGG 4 cut(s) 1220, 1668, 2072, 2674
BstNSI RCATGY 4 cut(s) 217, 1951, 2116, 2706
BstPAI GACNNNNGTC 1 cut(s) 2292
BstSCI CCNGG 5 cut(s) 91, 1218, 1666, 2070, 2672
BstSFI CTRYAG 3 cut(s) 779, 1869, 2373
BstSLI GKGCMC 2 cut(s) 1960, 2728
BstUI CGCG 5 cut(s) 72, 1109, 1954, 2451, 2629
BstV1I GCAGC 2 cut(s) 927, 1719
BstV2I GAAGAC 1 cut(s) 831
BstX2I RGATCY 5 cut(s) 229, 283, 344, 580, 1162
BstYI RGATCY 5 cut(s) 229, 283, 344, 580, 1162
Bsu15I ATCGAT 1 cut(s) 888
BsuI GTATCC 1 cut(s) 2160
BsuRI GGCC 2 cut(s) 1715, 2672
BsuTUI ATCGAT 1 cut(s) 888
BtgI CCRYGG 3 cut(s) 1377, 1952, 2231
BtrI CACGTC 1 cut(s) 1903
BtsCI GGATG 9 cut(s) 212, 446, 523, 806, 1249, 1373, 1770, 1867, 2568
BtsI GCAGTG 1 cut(s) 411
BtsIMutI CAGTG 6 cut(s) 270, 411, 458, 1325, 2114, 2771
BtuMI TCGCGA 1 cut(s) 72
BveI ACCTGC 3 cut(s) 96, 650, 1862
Cac8I GCNNGC 6 cut(s) 215, 500, 1508, 1956, 2114, 2568
CfoI GCGC 4 cut(s) 1031, 1218, 1621, 2631
Cfr13I GGNCC 1 cut(s) 522
Cfr42I CCGCGG 1 cut(s) 1955
ClaI ATCGAT 1 cut(s) 888
CseI GACGC 1 cut(s) 1493
Csp6I GTAC 5 cut(s) 137, 312, 1642, 1878, 2068
CspCI CAANNNNNGTGG 4 cut(s) 1375, 1410, 1552, 1587
CviQI GTAC 5 cut(s) 137, 312, 1642, 1878, 2068
DpnI GATC 9 cut(s) 231, 285, 346, 582, 887, 909, 1164, 1267, 1455
DpnII GATC 9 cut(s) 229, 283, 344, 580, 885, 907, 1162, 1265, 1453
EaeI YGGCCR 2 cut(s) 1713, 2670
EciI GGCGGA 1 cut(s) 1244
Eco130I CCWWGG 3 cut(s) 1377, 1548, 2362
Eco32I GATATC 2 cut(s) 969, 1610
Eco47I GGWCC 1 cut(s) 522
Eco47III AGCGCT 1 cut(s) 1030
Eco57I CTGAAG 2 cut(s) 371, 482
Eco88I CYCGRG 2 cut(s) 1589, 2585
EcoNI CCTNNNNNAGG 1 cut(s) 931
EcoRI GAATTC 2 cut(s) 422, 1398
EcoRII CCWGG 4 cut(s) 1218, 1666, 2070, 2672
EcoRV GATATC 2 cut(s) 969, 1610
EcoT14I CCWWGG 3 cut(s) 1377, 1548, 2362
ErhI CCWWGG 3 cut(s) 1377, 1548, 2362
FaqI GGGAC 4 cut(s) 535, 1870, 2291, 2431
FauI CCCGC 3 cut(s) 1795, 1947, 2456
FauNDI CATATG 1 cut(s) 1228
FblI GTMKAC 1 cut(s) 257
Fnu4HI GCNGC 6 cut(s) 916, 1107, 1258, 1733, 1952, 2698
FokI GGATG 9 cut(s) 219, 433, 530, 813, 1256, 1360, 1777, 1874, 2575
Fsp4HI GCNGC 6 cut(s) 916, 1107, 1258, 1733, 1952, 2698
FspBI CTAG 8 cut(s) 656, 863, 1302, 1406, 1425, 2610, 2694, 2780
GlaI GCGC 4 cut(s) 1030, 1217, 1620, 2630
GluI GCNGC 6 cut(s) 916, 1107, 1258, 1733, 1952, 2698
GsuI CTGGAG 3 cut(s) 246, 524, 734
HaeII RGCGCY 2 cut(s) 1032, 1622
HaeIII GGCC 2 cut(s) 1715, 2672
HapII CCGG 2 cut(s) 92, 1160
HgaI GACGC 1 cut(s) 1493
HhaI GCGC 4 cut(s) 1031, 1218, 1621, 2631
Hin1I GRCGYC 1 cut(s) 1485
Hin6I GCGC 4 cut(s) 1029, 1216, 1619, 2629
HinP1I GCGC 4 cut(s) 1029, 1216, 1619, 2629
HincII GTYRAC 1 cut(s) 258
HindII GTYRAC 1 cut(s) 258
HindIII AAGCTT 2 cut(s) 496, 719
HpaII CCGG 2 cut(s) 92, 1160
HphI GGTGA 3 cut(s) 234, 323, 1357
Hpy166II GTNNAC 7 cut(s) 242, 258, 331, 1980, 2068, 2438, 2735
Hpy8I GTNNAC 7 cut(s) 242, 258, 331, 1980, 2068, 2438, 2735
Hpy99I CGWCG 1 cut(s) 160
HpyAV CCTTC 5 cut(s) 437, 476, 927, 1090, 2738
HpyCH4IV ACGT 4 cut(s) 100, 1640, 1902, 2751
HpyF10VI GCNNNNNNNGC 5 cut(s) 78, 161, 1112, 1906, 2703
HpySE526I ACGT 4 cut(s) 100, 1640, 1902, 2751
Hsp92I GRCGYC 1 cut(s) 1485
HspAI GCGC 4 cut(s) 1029, 1216, 1619, 2629
KspI CCGCGG 1 cut(s) 1955
Kzo9I GATC 9 cut(s) 229, 283, 344, 580, 885, 907, 1162, 1265, 1453
LmnI GCTCC 5 cut(s) 210, 505, 671, 893, 2318
Lsp1109I GCAGC 2 cut(s) 927, 1719
LweI GCATC 7 cut(s) 616, 672, 784, 1411, 2022, 2166, 2553
MaeI CTAG 8 cut(s) 656, 863, 1302, 1406, 1425, 2610, 2694, 2780
MaeII ACGT 4 cut(s) 100, 1640, 1902, 2751
MaeIII GTNAC 2 cut(s) 1843, 2306
MalI GATC 9 cut(s) 231, 285, 346, 582, 887, 909, 1164, 1267, 1455
MboI GATC 9 cut(s) 229, 283, 344, 580, 885, 907, 1162, 1265, 1453
MfeI CAATTG 2 cut(s) 549, 1725
MflI RGATCY 5 cut(s) 229, 283, 344, 580, 1162
MhlI GDGCHC 2 cut(s) 1960, 2728
MlsI TGGCCA 2 cut(s) 1715, 2672
MluNI TGGCCA 2 cut(s) 1715, 2672
MlyI GAGTC 6 cut(s) 253, 395, 1508, 1601, 2519, 2770
MmeI TCCRAC 6 cut(s) 215, 558, 918, 1018, 1215, 2407
Mox20I TGGCCA 2 cut(s) 1715, 2672
MroXI GAANNNNTTC 5 cut(s) 66, 426, 722, 2342, 2399
MscI TGGCCA 2 cut(s) 1715, 2672
MslI CAYNNNNRTG 2 cut(s) 516, 2721
Msp20I TGGCCA 2 cut(s) 1715, 2672
MspA1I CMGCKG 2 cut(s) 1954, 2711
MspCI CTTAAG 1 cut(s) 928
MspI CCGG 2 cut(s) 92, 1160
MspR9I CCNGG 5 cut(s) 93, 1220, 1668, 2072, 2674
MunI CAATTG 2 cut(s) 549, 1725
Mva1269I GAATGC 2 cut(s) 83, 399
MvaI CCWGG 4 cut(s) 1220, 1668, 2072, 2674
MvnI CGCG 5 cut(s) 72, 1109, 1954, 2451, 2629
MwoI GCNNNNNNNGC 5 cut(s) 78, 161, 1112, 1906, 2703
NciI CCSGG 1 cut(s) 93
NcoI CCATGG 1 cut(s) 1377
NdeI CATATG 1 cut(s) 1228
NdeII GATC 9 cut(s) 229, 283, 344, 580, 885, 907, 1162, 1265, 1453
NlaIV GGNNCC 6 cut(s) 279, 523, 1164, 1224, 2057, 2191
NmeAIII GCCGAG 1 cut(s) 821
NmuCI GTSAC 1 cut(s) 2306
NruI TCGCGA 1 cut(s) 72
NspI RCATGY 4 cut(s) 217, 1951, 2116, 2706
PaeI GCATGC 2 cut(s) 217, 2116
PaeR7I CTCGAG 2 cut(s) 1589, 2585
PasI CCCWGGG 1 cut(s) 1667
PctI GAATGC 2 cut(s) 83, 399
PdmI GAANNNNTTC 5 cut(s) 66, 426, 722, 2342, 2399
PfeI GAWTC 9 cut(s) 691, 821, 1247, 1517, 1559, 1865, 1963, 2126, 2219
PflMI CCANNNNNTGG 1 cut(s) 341
PkrI GCNGC 6 cut(s) 917, 1108, 1259, 1734, 1953, 2699
PleI GAGTC 6 cut(s) 253, 394, 1507, 1600, 2519, 2770
PpsI GAGTC 6 cut(s) 253, 394, 1507, 1600, 2519, 2770
PshAI GACNNNNGTC 1 cut(s) 2292
PshBI ATTAAT 2 cut(s) 1055, 2577
Psp6I CCWGG 4 cut(s) 1218, 1666, 2070, 2672
PspGI CCWGG 4 cut(s) 1218, 1666, 2070, 2672
PspN4I GGNNCC 6 cut(s) 279, 523, 1164, 1224, 2057, 2191
PspPI GGNCC 1 cut(s) 522
PspXI VCTCGAGB 2 cut(s) 1589, 2585
PstI CTGCAG 2 cut(s) 1873, 2377
PsuI RGATCY 5 cut(s) 229, 283, 344, 580, 1162
PvuII CAGCTG 1 cut(s) 2711
RruI TCGCGA 1 cut(s) 72
RsaI GTAC 5 cut(s) 138, 313, 1643, 1879, 2069
RsaNI GTAC 5 cut(s) 137, 312, 1642, 1878, 2068
RseI CAYNNNNRTG 2 cut(s) 516, 2721
SacII CCGCGG 1 cut(s) 1955
SalI GTCGAC 1 cut(s) 256
SatI GCNGC 6 cut(s) 916, 1107, 1258, 1733, 1952, 2698
Sau3AI GATC 9 cut(s) 229, 283, 344, 580, 885, 907, 1162, 1265, 1453
Sau96I GGNCC 1 cut(s) 522
SchI GAGTC 6 cut(s) 253, 395, 1508, 1601, 2519, 2770
ScrFI CCNGG 5 cut(s) 93, 1220, 1668, 2072, 2674
SduI GDGCHC 2 cut(s) 1960, 2728
SfaNI GCATC 7 cut(s) 616, 672, 784, 1411, 2022, 2166, 2553
SfcI CTRYAG 3 cut(s) 779, 1869, 2373
Sfr274I CTCGAG 2 cut(s) 1589, 2585
Sfr303I CCGCGG 1 cut(s) 1955
SgrBI CCGCGG 1 cut(s) 1955
SinI GGWCC 1 cut(s) 522
SlaI CTCGAG 2 cut(s) 1589, 2585
SmiMI CAYNNNNRTG 2 cut(s) 516, 2721
SmlI CTYRAG 5 cut(s) 868, 928, 1589, 1613, 2585
SmoI CTYRAG 5 cut(s) 868, 928, 1589, 1613, 2585
SpeI ACTAGT 1 cut(s) 2609
SphI GCATGC 2 cut(s) 217, 2116
SspI AATATT 1 cut(s) 435
SspMI CTAG 8 cut(s) 656, 863, 1302, 1406, 1425, 2610, 2694, 2780
StyD4I CCNGG 5 cut(s) 91, 1218, 1666, 2070, 2672
StyI CCWWGG 3 cut(s) 1377, 1548, 2362
TaiI ACGT 4 cut(s) 103, 1643, 1905, 2754
TaqI TCGA 8 cut(s) 257, 848, 888, 1590, 1682, 2313, 2403, 2586
TaqII GACCGA 1 cut(s) 1094
TatI WGTACW 1 cut(s) 136
TauI GCSGC 4 cut(s) 1109, 1260, 1954, 2700
TfiI GAWTC 9 cut(s) 691, 821, 1247, 1517, 1559, 1865, 1963, 2126, 2219
TscAI CASTG 6 cut(s) 277, 418, 465, 1325, 2114, 2778
TseFI GTSAC 1 cut(s) 2306
TseI GCWGC 2 cut(s) 915, 1732
Tsp45I GTSAC 1 cut(s) 2306
TspGWI ACGGA 1 cut(s) 2048
TspRI CASTG 6 cut(s) 277, 418, 465, 1325, 2114, 2778
Van91I CCANNNNNTGG 1 cut(s) 341
Vha464I CTTAAG 1 cut(s) 928
VpaK11BI GGWCC 1 cut(s) 522
VspI ATTAAT 2 cut(s) 1055, 2577
XagI CCTNNNNNAGG 1 cut(s) 931
XapI RAATTY 8 cut(s) 422, 982, 1011, 1398, 1535, 1646, 1708, 2325
XceI RCATGY 4 cut(s) 217, 1951, 2116, 2706
XcmI CCANNNNNNNNNTGG 1 cut(s) 1375
XhoI CTCGAG 2 cut(s) 1589, 2585
XmiI GTMKAC 1 cut(s) 257
XmnI GAANNNNTTC 5 cut(s) 66, 426, 722, 2342, 2399
XspI CTAG 8 cut(s) 656, 863, 1302, 1406, 1425, 2610, 2694, 2780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.