Rh7CG508000

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000129
Physical Location & Seq
Forward (+)
68684577 .. 68693609
9033 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG508000.1

Sequence Viewer

Length: 1731 bp
ATGCCTGTTAGACGGGAATATAGTGCCAAGCTACCGAATCAAAGGTCAATGGAGAACTCGTTGGACTCCCCTGCCCAACCTCAACCTTCAGAGGTGATTTCTGATGCAACTATTAATGTTATTTCAGGGGGGGTCTCCCAAAACCTAGTGGTTCATGGCGGTACTAATGTATTGTTTGAGGATCCGGTTGGTATCACGGTCGCATCCGAGGGTTTAGAAATTTTGGTGGCAAAGGAAGTTGGTGCTGATCATGATGTTGTCATAGCTGGTCCCTCTAAGATAGTTTCTGGTAGCTCTGGGATTGCTGATGCTTCTATCCCAGCAGTTCCTAGACATTCTGAGGGTTCTCCAATTGCTTTGGTTGGGAATGAGGTTGACCTTACTGGGTGCATTACTCCCTCTAATGATATTCAAGATGCTCCTAGTCCAGTGGTTCAGGTTGTTAATGAAATTTTTGAGGAGGCCGCTCTTCATCATATTCACCAAATTGCTGATATTGTAATGAATGAGACTGAGGTTCTATCTATGCCTTTCTGCTCAGATTTCATTGGCATATTTCCTAAAGATGAAATTCCAGAGTGGTTCAGCACTATATCTACCAGAAATCCCATATCAATCTCGATACCTCATCAAAATCTGGCAGATGATAACGAGTGGAAGGGATTTGCCGCGTGTGCTATATTCTCAGTCAAGGGGCATACTGCTCTCACCCTTATTGAACCGGATCCTGATTTTCTTAATTACTCGTGTCAAGTCACATTGGAAACTGATGTTATGCGTCTGGAACCCAAAGTGTTGGAAATGGAATTACGCCCTCTTGGATCAAGTTCTCATCTGCTTGTGATTTTCTTTTTATCTAGTTGGAAGTTTCCACAGTGGGGGTTAAATCGATCAACTGTAGTGAGGGCTACATTTGAAACCACCAATCCATCCATGGTGGTCCAGAAATGTGGAATTCGTCTAGTCTATGAGCAAGATGCTGGATGGCATTCCAGAGTATTCGGGGAAGATGATCCGATTTGTCTGAATGAAGTTGAGGACGACGCCTTTGTATTGGAGTCTGGCTGGCTTAGTCAATATTTGGAATGGGAGAAATTCATTCCACCCTTGGAAGAAGAATCCACACTTGTGCTGGTAAAGAACCTTGATAGAAGGGATCCCAGAACCCCACTGGAAAAATACTTTGAATTGCACTCACGAAAATATAGAAATTGGGACTGGTCTGACCCTCGTGTTGCTTATTGTGCCTTCAAGAGAGTTGAAATCTCCAAGTTGAAATGGTTCATGCCTTTTATCAACCAAGGCAACTCTGCAGAAATCCAACTGCCTTTAAATGTGTTCGATGATGATAATTGGTTGGGGTTTGCAGTATATGTTCAGTTGTCCCATGACCAATATCCAAACATTAGTCATGGCAGTACCACTATCGATTCAGAGGATGTTGTGCTTAATTTTCGTCTGGACTCTGATGTTGCTTGGCACGGGTTATTTGATCTCAACATGCATTTAAGTTTTGAGATTAGAGAGCCATCGGTATTAGATACGACTTGGTTCCTTTATTTACCGCGCACTAAAGTCTGTAGTAGGATGTGGAGGCAATGCCAATTGGCCAGGATAACTATGTGGTTCTCTAGACCATGCTTAGCAGTGCATAGTCGTGCCCTTCGTCTACAATTTAAGGAGGACGTTGAACATCTTGTAGAAACACTGACCCTCGCGGAATTACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

576

Amino Acids

65.02

Weight (kDa)

4.78

Isoelectric Point (pI)

41.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 186 - 327 6.4e-10 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 467
AccI GTMKAC 1 cut(s) 1669
AccII CGCG 3 cut(s) 671, 1567, 1718
AciI CCGC 5 cut(s) 159, 465, 669, 1565, 1718
AclWI GGATC 8 cut(s) 176, 189, 719, 732, 829, 1007, 1151, 1164
AcoI YGGCCR 1 cut(s) 1608
AcsI RAATTY 5 cut(s) 219, 450, 570, 954, 1094
AcuI CTGAAG 1 cut(s) 72
AcyI GRCGYC 1 cut(s) 1044
AfaI GTAC 2 cut(s) 163, 1420
AfiI CCNNNNNNNGG 1 cut(s) 878
AgsI TTSAA 8 cut(s) 413, 719, 917, 1187, 1252, 1262, 1276, 1691
AjnI CCWGG 1 cut(s) 1610
AleI CACNNNNGTG 1 cut(s) 1127
AluBI AGCT 3 cut(s) 31, 266, 294
AluI AGCT 3 cut(s) 31, 266, 294
Alw26I GTCTC 2 cut(s) 139, 503
AlwI GGATC 8 cut(s) 176, 189, 719, 732, 829, 1007, 1151, 1164
AoxI GGCC 2 cut(s) 462, 1608
ApoI RAATTY 5 cut(s) 219, 450, 570, 954, 1094
ArsI GACNNNNNNTTYG 4 cut(s) 29, 61, 1031, 1063
AseI ATTAAT 1 cut(s) 114
Asp700I GAANNNNTTC 1 cut(s) 1280
AspLEI GCGC 1 cut(s) 1569
AspS9I GGNCC 2 cut(s) 269, 940
AsuHPI GGTGA 3 cut(s) 106, 473, 700
AvaII GGWCC 2 cut(s) 269, 940
BaeGI GKGCMC 1 cut(s) 1663
BaeI ACNNNNGTAYC 2 cut(s) 153, 186
BalI TGGCCA 1 cut(s) 1610
BamHI GGATCC 3 cut(s) 181, 724, 1156
BauI CACGAG 2 cut(s) 745, 1230
BccI CCATC 3 cut(s) 937, 978, 1537
BciT130I CCWGG 1 cut(s) 1612
BclI TGATCA 1 cut(s) 247
BcoDI GTCTC 2 cut(s) 139, 503
BfaI CTAG 6 cut(s) 146, 330, 423, 858, 962, 1632
BfmI CTRYAG 3 cut(s) 897, 1311, 1579
BisI GCNGC 2 cut(s) 465, 669
BlpI GCTNAGC 1 cut(s) 1642
BlsI GCNGC 2 cut(s) 466, 670
Bme1390I CCNGG 1 cut(s) 1612
Bme18I GGWCC 2 cut(s) 269, 940
BmgT120I GGNCC 2 cut(s) 269, 940
BmiI GGNNCC 6 cut(s) 183, 271, 726, 786, 1158, 1553
BmrFI CCNGG 1 cut(s) 1612
BmrI ACTGGG 1 cut(s) 393
BmsI GCATC 5 cut(s) 94, 212, 298, 406, 967
BmuI ACTGGG 1 cut(s) 393
Bpu1102I GCTNAGC 1 cut(s) 1642
Bsa29I ATCGAT 2 cut(s) 889, 1428
BsaHI GRCGYC 1 cut(s) 1044
BsaI GGTCTC 1 cut(s) 139
BsaJI CCNNGG 4 cut(s) 207, 933, 1107, 1300
BsaWI WCCGGW 2 cut(s) 184, 721
BsaXI ACNNNNNCTCC 2 cut(s) 44, 74
Bsc4I CCNNNNNNNGG 1 cut(s) 878
Bse1I ACTGG 4 cut(s) 388, 428, 1176, 1223
Bse3DI GCAATG 1 cut(s) 1604
BseBI CCWGG 1 cut(s) 1612
BseCI ATCGAT 2 cut(s) 889, 1428
BseDI CCNNGG 4 cut(s) 207, 933, 1107, 1300
BseGI GGATG 5 cut(s) 203, 929, 989, 1444, 1593
BseLI CCNNNNNNNGG 1 cut(s) 878
BseMI GCAATG 1 cut(s) 1604
BseMII CTCAG 4 cut(s) 330, 504, 552, 699
BseNI ACTGG 4 cut(s) 388, 428, 1176, 1223
BseRI GAGGAG 1 cut(s) 473
BseSI GKGCMC 1 cut(s) 1663
BseYI CCCAGC 1 cut(s) 319
Bsh1236I CGCG 3 cut(s) 671, 1567, 1718
Bsh1285I CGRYCG 1 cut(s) 201
BshFI GGCC 2 cut(s) 464, 1610
BshVI ATCGAT 2 cut(s) 889, 1428
BsiEI CGRYCG 1 cut(s) 201
BsiSI CCGG 2 cut(s) 185, 722
BslFI GGGAC 3 cut(s) 255, 1229, 1369
BslI CCNNNNNNNGG 1 cut(s) 878
BsmAI GTCTC 2 cut(s) 139, 503
BsmFI GGGAC 3 cut(s) 255, 1229, 1369
BsmI GAATGC 1 cut(s) 988
BsnI GGCC 2 cut(s) 464, 1610
Bso31I GGTCTC 1 cut(s) 139
Bsp1286I GDGCHC 1 cut(s) 1663
Bsp143I GATC 8 cut(s) 181, 247, 724, 821, 890, 1012, 1156, 1492
Bsp1720I GCTNAGC 1 cut(s) 1642
Bsp19I CCATGG 1 cut(s) 933
BspACI CCGC 5 cut(s) 159, 465, 669, 1565, 1718
BspANI GGCC 2 cut(s) 464, 1610
BspCNI CTCAG 4 cut(s) 331, 505, 551, 698
BspDI ATCGAT 2 cut(s) 889, 1428
BspFNI CGCG 3 cut(s) 671, 1567, 1718
BspHI TCATGA 1 cut(s) 250
BspLI GGNNCC 6 cut(s) 183, 271, 726, 786, 1158, 1553
BspMAI CTGCAG 1 cut(s) 1315
BspPI GGATC 8 cut(s) 176, 189, 719, 732, 829, 1007, 1151, 1164
BspQI GCTCTTC 1 cut(s) 474
BspTNI GGTCTC 1 cut(s) 139
BsrBI CCGCTC 1 cut(s) 467
BsrDI GCAATG 1 cut(s) 1604
BsrI ACTGG 4 cut(s) 388, 428, 1176, 1223
BssECI CCNNGG 4 cut(s) 207, 933, 1107, 1300
BssMI GATC 8 cut(s) 181, 247, 724, 821, 890, 1012, 1156, 1492
BssNI GRCGYC 1 cut(s) 1044
BssSI CACGAG 2 cut(s) 745, 1230
BssT1I CCWWGG 3 cut(s) 933, 1107, 1300
Bst2BI CACGAG 2 cut(s) 745, 1230
Bst2UI CCWGG 1 cut(s) 1612
Bst4CI ACNGT 3 cut(s) 199, 876, 898
Bst6I CTCTTC 1 cut(s) 474
BstACI GRCGYC 1 cut(s) 1044
BstC8I GCNNGC 1 cut(s) 1067
BstDEI CTNAG 7 cut(s) 276, 339, 513, 538, 685, 1070, 1642
BstDSI CCRYGG 1 cut(s) 933
BstF5I GGATG 5 cut(s) 203, 929, 989, 1444, 1593
BstFNI CGCG 3 cut(s) 671, 1567, 1718
BstHHI GCGC 1 cut(s) 1569
BstKTI GATC 8 cut(s) 184, 250, 727, 824, 893, 1015, 1159, 1495
BstMAI GTCTC 2 cut(s) 139, 503
BstMBI GATC 8 cut(s) 181, 247, 724, 821, 890, 1012, 1156, 1492
BstMCI CGRYCG 1 cut(s) 201
BstMWI GCNNNNNNNGC 2 cut(s) 674, 1244
BstNI CCWGG 1 cut(s) 1612
BstNSI RCATGY 1 cut(s) 1504
BstSCI CCNGG 1 cut(s) 1610
BstSFI CTRYAG 3 cut(s) 897, 1311, 1579
BstSLI GKGCMC 1 cut(s) 1663
BstUI CGCG 3 cut(s) 671, 1567, 1718
BstX2I RGATCY 3 cut(s) 181, 724, 1156
BstXI CCANNNNNNTGG 2 cut(s) 796, 950
BstYI RGATCY 3 cut(s) 181, 724, 1156
Bsu15I ATCGAT 2 cut(s) 889, 1428
BsuRI GGCC 2 cut(s) 464, 1610
BsuTUI ATCGAT 2 cut(s) 889, 1428
BtgI CCRYGG 1 cut(s) 933
BtsCI GGATG 5 cut(s) 203, 929, 989, 1444, 1593
BtsI GCAGTG 1 cut(s) 1653
BtsIMutI CAGTG 5 cut(s) 435, 881, 1169, 1653, 1706
Cac8I GCNNGC 1 cut(s) 1067
CciI TCATGA 1 cut(s) 250
CfoI GCGC 1 cut(s) 1569
Cfr13I GGNCC 2 cut(s) 269, 940
ClaI ATCGAT 2 cut(s) 889, 1428
CseI GACGC 2 cut(s) 767, 1052
Csp6I GTAC 2 cut(s) 162, 1419
CviAII CATG 8 cut(s) 155, 251, 934, 1285, 1388, 1412, 1501, 1638
CviJI RGCY 9 cut(s) 31, 266, 294, 464, 908, 1065, 1069, 1528, 1610
CviKI_1 RGCY 9 cut(s) 31, 266, 294, 464, 908, 1065, 1069, 1528, 1610
CviQI GTAC 2 cut(s) 162, 1419
DdeI CTNAG 7 cut(s) 276, 339, 513, 538, 685, 1070, 1642
DpnI GATC 8 cut(s) 183, 249, 726, 823, 892, 1014, 1158, 1494
DpnII GATC 8 cut(s) 181, 247, 724, 821, 890, 1012, 1156, 1492
DraI TTTAAA 1 cut(s) 1332
EaeI YGGCCR 1 cut(s) 1608
Eam1104I CTCTTC 1 cut(s) 474
EarI CTCTTC 1 cut(s) 474
Eco130I CCWWGG 3 cut(s) 933, 1107, 1300
Eco31I GGTCTC 1 cut(s) 139
Eco47I GGWCC 2 cut(s) 269, 940
Eco57I CTGAAG 1 cut(s) 72
EcoRI GAATTC 1 cut(s) 954
EcoRII CCWGG 1 cut(s) 1610
EcoT14I CCWWGG 3 cut(s) 933, 1107, 1300
EcoT22I ATGCAT 1 cut(s) 1506
ErhI CCWWGG 3 cut(s) 933, 1107, 1300
FaeI CATG 8 cut(s) 158, 254, 937, 1288, 1391, 1415, 1504, 1641
FaqI GGGAC 3 cut(s) 255, 1229, 1369
FatI CATG 8 cut(s) 154, 250, 933, 1284, 1387, 1411, 1500, 1637
FbaI TGATCA 1 cut(s) 247
FblI GTMKAC 1 cut(s) 1669
Fnu4HI GCNGC 2 cut(s) 465, 669
FokI GGATG 5 cut(s) 190, 916, 996, 1451, 1600
Fsp4HI GCNGC 2 cut(s) 465, 669
FspBI CTAG 6 cut(s) 146, 330, 423, 858, 962, 1632
GlaI GCGC 1 cut(s) 1568
GluI GCNGC 2 cut(s) 465, 669
GsaI CCCAGC 1 cut(s) 323
HaeIII GGCC 2 cut(s) 464, 1610
HapII CCGG 2 cut(s) 185, 722
HgaI GACGC 2 cut(s) 767, 1052
HhaI GCGC 1 cut(s) 1569
Hin1I GRCGYC 1 cut(s) 1044
Hin1II CATG 8 cut(s) 158, 254, 937, 1288, 1391, 1415, 1504, 1641
Hin6I GCGC 1 cut(s) 1567
HinP1I GCGC 1 cut(s) 1567
HincII GTYRAC 1 cut(s) 376
HindII GTYRAC 1 cut(s) 376
HinfI GANTC 6 cut(s) 37, 65, 1058, 1118, 1430, 1463
HpaII CCGG 2 cut(s) 185, 722
HphI GGTGA 3 cut(s) 106, 473, 700
Hpy166II GTNNAC 2 cut(s) 376, 1670
Hpy8I GTNNAC 2 cut(s) 376, 1670
Hpy99I CGWCG 1 cut(s) 1046
HpyAV CCTTC 5 cut(s) 96, 652, 1146, 1258, 1673
HpyCH4III ACNGT 3 cut(s) 199, 876, 898
HpyCH4IV ACGT 1 cut(s) 1686
HpyCH4V TGCA 7 cut(s) 107, 390, 1192, 1313, 1367, 1504, 1651
HpyF10VI GCNNNNNNNGC 2 cut(s) 674, 1244
HpyF3I CTNAG 7 cut(s) 276, 339, 513, 538, 685, 1070, 1642
HpySE526I ACGT 1 cut(s) 1686
Hsp92I GRCGYC 1 cut(s) 1044
Hsp92II CATG 8 cut(s) 158, 254, 937, 1288, 1391, 1415, 1504, 1641
HspAI GCGC 1 cut(s) 1567
Ksp22I TGATCA 1 cut(s) 247
Kzo9I GATC 8 cut(s) 181, 247, 724, 821, 890, 1012, 1156, 1492
LguI GCTCTTC 1 cut(s) 474
LmnI GCTCC 1 cut(s) 424
LweI GCATC 5 cut(s) 94, 212, 298, 406, 967
MaeI CTAG 6 cut(s) 146, 330, 423, 858, 962, 1632
MaeII ACGT 1 cut(s) 1686
MaeIII GTNAC 1 cut(s) 754
MalI GATC 8 cut(s) 183, 249, 726, 823, 892, 1014, 1158, 1494
MbiI CCGCTC 1 cut(s) 467
MboI GATC 8 cut(s) 181, 247, 724, 821, 890, 1012, 1156, 1492
MboII GAAGA 4 cut(s) 461, 1019, 1124, 1127
MfeI CAATTG 2 cut(s) 351, 1604
MflI RGATCY 3 cut(s) 181, 724, 1156
MhlI GDGCHC 1 cut(s) 1663
MlsI TGGCCA 1 cut(s) 1610
MluNI TGGCCA 1 cut(s) 1610
MlyI GAGTC 3 cut(s) 59, 1067, 1457
MmeI TCCRAC 4 cut(s) 42, 777, 842, 1345
Mox20I TGGCCA 1 cut(s) 1610
Mph1103I ATGCAT 1 cut(s) 1506
MroXI GAANNNNTTC 1 cut(s) 1280
MscI TGGCCA 1 cut(s) 1610
MseI TTAA 8 cut(s) 114, 444, 738, 884, 1331, 1449, 1508, 1677
MslI CAYNNNNRTG 2 cut(s) 1127, 1656
Msp20I TGGCCA 1 cut(s) 1610
MspI CCGG 2 cut(s) 185, 722
MspR9I CCNGG 1 cut(s) 1612
MunI CAATTG 2 cut(s) 351, 1604
Mva1269I GAATGC 1 cut(s) 988
MvaI CCWGG 1 cut(s) 1612
MvnI CGCG 3 cut(s) 671, 1567, 1718
MwoI GCNNNNNNNGC 2 cut(s) 674, 1244
NcoI CCATGG 1 cut(s) 933
NdeII GATC 8 cut(s) 181, 247, 724, 821, 890, 1012, 1156, 1492
NlaIII CATG 8 cut(s) 158, 254, 937, 1288, 1391, 1415, 1504, 1641
NlaIV GGNNCC 6 cut(s) 183, 271, 726, 786, 1158, 1553
NmuCI GTSAC 1 cut(s) 754
NsiI ATGCAT 1 cut(s) 1506
NspI RCATGY 1 cut(s) 1504
OliI CACNNNNGTG 1 cut(s) 1127
PagI TCATGA 1 cut(s) 250
PciSI GCTCTTC 1 cut(s) 474
PcsI WCGNNNNNNNCGW 1 cut(s) 1663
PctI GAATGC 1 cut(s) 988
PdmI GAANNNNTTC 1 cut(s) 1280
PfeI GAWTC 3 cut(s) 37, 1118, 1430
PkrI GCNGC 2 cut(s) 466, 670
PleI GAGTC 3 cut(s) 59, 1066, 1457
PpsI GAGTC 3 cut(s) 59, 1066, 1457
PshBI ATTAAT 1 cut(s) 114
Psp6I CCWGG 1 cut(s) 1610
PspFI CCCAGC 1 cut(s) 319
PspGI CCWGG 1 cut(s) 1610
PspN4I GGNNCC 6 cut(s) 183, 271, 726, 786, 1158, 1553
PspPI GGNCC 2 cut(s) 269, 940
PstI CTGCAG 1 cut(s) 1315
PsuI RGATCY 3 cut(s) 181, 724, 1156
RsaI GTAC 2 cut(s) 163, 1420
RsaNI GTAC 2 cut(s) 162, 1419
RseI CAYNNNNRTG 2 cut(s) 1127, 1656
SapI GCTCTTC 1 cut(s) 474
SaqAI TTAA 8 cut(s) 114, 444, 738, 884, 1331, 1449, 1508, 1677
SatI GCNGC 2 cut(s) 465, 669
Sau3AI GATC 8 cut(s) 181, 247, 724, 821, 890, 1012, 1156, 1492
Sau96I GGNCC 2 cut(s) 269, 940
SchI GAGTC 3 cut(s) 59, 1067, 1457
ScrFI CCNGG 1 cut(s) 1612
SduI GDGCHC 1 cut(s) 1663
SfaNI GCATC 5 cut(s) 94, 212, 298, 406, 967
SfcI CTRYAG 3 cut(s) 897, 1311, 1579
SinI GGWCC 2 cut(s) 269, 940
SmiMI CAYNNNNRTG 2 cut(s) 1127, 1656
SsiI CCGC 5 cut(s) 159, 465, 669, 1565, 1718
SspI AATATT 1 cut(s) 1079
SspMI CTAG 6 cut(s) 146, 330, 423, 858, 962, 1632
StyD4I CCNGG 1 cut(s) 1610
StyI CCWWGG 3 cut(s) 933, 1107, 1300
TaaI ACNGT 3 cut(s) 199, 876, 898
TaiI ACGT 1 cut(s) 1689
TaqI TCGA 4 cut(s) 620, 889, 1341, 1428
TauI GCSGC 2 cut(s) 467, 671
TfiI GAWTC 3 cut(s) 37, 1118, 1430
Tru1I TTAA 8 cut(s) 114, 444, 738, 884, 1331, 1449, 1508, 1677
Tru9I TTAA 8 cut(s) 114, 444, 738, 884, 1331, 1449, 1508, 1677
TscAI CASTG 5 cut(s) 435, 881, 1176, 1653, 1713
TseFI GTSAC 1 cut(s) 754
Tsp45I GTSAC 1 cut(s) 754
TspDTI ATGAA 9 cut(s) 143, 461, 462, 518, 535, 582, 1044, 1087, 1273
TspRI CASTG 5 cut(s) 435, 881, 1176, 1653, 1713
VpaK11BI GGWCC 2 cut(s) 269, 940
VspI ATTAAT 1 cut(s) 114
XapI RAATTY 5 cut(s) 219, 450, 570, 954, 1094
XbaI TCTAGA 1 cut(s) 1631
XceI RCATGY 1 cut(s) 1504
XcmI CCANNNNNNNNNTGG 3 cut(s) 931, 1129, 1168
XmiI GTMKAC 1 cut(s) 1669
XmnI GAANNNNTTC 1 cut(s) 1280
XspI CTAG 6 cut(s) 146, 330, 423, 858, 962, 1632
Zsp2I ATGCAT 1 cut(s) 1506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.