Prupe.8G005600_v2.0.a1

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
455000 .. 460822
5823 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G005600.1

Sequence Viewer

Length: 3633 bp
ATGATGCTCCAAGCAGATAGTTCTTCTTCGTCTTCTTCTTCTTCTCCGACGCCTCTATGGACGTACGACGTCTTCCTCAGTTTCAGAGGCACGGACACCCGCACAGGTTTTACAGACCATCTCTATGCTGCTCTGAATCGAAAAGGAATTATCACATTCAGGGATGATGAAAAGCTCAAAAAAGGAAAATCCATCTCGGAGCTCTTCAATGCAATTGAAGAATCAAGGTATGTGGTCGCCGTTATTTCGAGTAATTACGCCGATTCGACATGGTGTTTGGAAGAGCTTGCAAAGGCTGTTGAATGCAAGGAACTGATGGGACAGACACTAATCCCAATTTTCTATCACGTCCATCCATCTGAGGTGGGAAATCAAACAGGGAGTTTCGAGATAGCCTTTTCTAAGCATGAACAAGGCTTTAAAGGTAATTTAGAAAAGGTGAAAAGGTGGAGAGCTGCACTTTCTCAAGTAGCCGGTCTGTCTAGATACCATTTGCATAATGGATATGAATCAGAACTCATTCAAACTGTTGTCCGCAATATTTCCACTGAATTATATCAAACAATGCCAAGTGCATTTACAGGTTTAGTTGGGGTGGATTCTCGCGTAAAAGAAATGCTTTCGTACTTAGAGATAGGGTTGAATAAAGTACGCACGATAGGCATTTGGGGGATGGGGGGAATGGGTAAGACAACTATTGCTCATGTAGTTTCTGAAAGGATACGTACTCAGTTTGAAGCATACAGCTTTCTTTCGAATGTTAGAGAGGTAACTGAAAAACAAGGTGTAGTTCATTTACAGAAGAAACTTCTTTCTGATATCTTGCTGGAAAGTAGTGTAAGCATACACAACACTTATACAGGAATCAGTATAATTAGGCGAAGATTATGTACTAAAAAGGTTCTTATCATTCTTGATGATGTGGATCGGTTAGAACAATTGAGGGCATTGTCTGGCCATAATTGGTTCGGTCCAGGGAGTAGAATCATCATAACCTCAAGGGATAAACGTGTGCTAATAGAACATGGAGTGGACAAAATATGTCAGGTTAAGCCATTGACTAACAATGAAGCTCTTCAGCTCTTTAATTGGAAATCCTTCCGGAGTGACCAGGTTGGAGAAGAATTTCTCGAGCTATCTAAGAGTTTTGTAAAATATGCTAATGGCCTCCCATTAGCCATTGAAAATCTAGGTACATCCCTCTTTCAGAGAAGCCTAGAAGAATGGCCAGGTGCATTATTTAGACTAAAAGAAAGGCCTGACGATATAACTTTTGATGTTCTTAAAGTAAGTTTTGACGGATTACAGGAAATAGAAAAGAAAATATTTTTGGACATTGCATTTTTCTTCAAAGGAGAGGACAAATATCGCGTAACAAGAATACTAGAGAGTTGTTATGGCCACTGTCCAGTCATTCATATTAAAGTTCTCATGGATAAATGTCTTCTAACTCCATTCGGAAGAAAATTGTGGATGCATGATTTGATACAAAAATTGGGTTGGGAAATTGTTCGTCAAGAACATTCTGAGGCTGGCAAACATAGCAGGTTGTGGCTTCCCAATGATATCAACCCTGTGCTTGTAAATAATACGGGAATGACTGTGGTCCAAGGTGTATTCCTGAATTTTCAAAAAAATGAGGATATTAACTTGAGTGTTAATGATCCTTTTTCAGAGATGAAAAATCTAAGATTGCTCAAAATTTGGAACGGGGACTTTTTTGGAAAAGCAAAATATCTTTCTAACCAGTTAGCACTTTTGGAATGGCATGAATGTCCTTTAAATTGTTTGCCATCAGAATTTGAATCAGATAAGCTTGTCGAACTCAAGATGCATTCAAGTCGCATTAAACAACTATGGACAGGGGTTAAGCATTGGAGCAGGCTAACATTCATTGATATGAGTGACTCCGAGTACTTGATCAAGACCCCCGACTTCACTGGGGTTCCAAATCTTGAGATTTTGGTGCTTCAAGGTTGTACAAGACTGGTTGAGGTTCACCCATCCATTGGAGATCTCAAAAAACTTATTTTGTTGAATATGAGAAACTGCAAATGTGTTGAGAGTCTTCCACCTTTCAAAAGTTTGGAATCTCTTGAGAGCTTTGCTCTGTCCTCTTGTTCAAGACTCAAGAAGTTTCCCGAAATTGAAGGAAATATGAAATTCTTGTTGGAGGTCTATTTAGATGAGACTGCTATTAAGGAATTGCCTACATCGATTCAACATTTCACCAGTCTTACATCGTTGAACTTAAGAGACTGCAAAAACCTTTTGTCTCTGCCGAGTACCATTCAATATTTGACATCTCTGAAAAGCCTCATTCTAGCTGGTTGTTCAAAGTTTGATGAGATACCTGAGAATCTGAGTTGTGTGGAATGTCTAGAGGAGCTTGATATAAGTGGAACTGCTATAAGAGAATCATCGTTCGTTGTAGGTATGATAAATCTAAAATATCTATCCTTCCGAGGATGTAAAGATATACCTTCAGAATCATGGCACTCGCTCTTTAATTGTTTGTGGTGCAGAAAGAGCCATGTCCCCACGAGTTTGTTGTTGCCTACTTCCTTCTCAAGTATAACTTGTTTGACAGAGCTAGACATAAGTTATTGCAATCTGATGGATGGAGCAATTCCCAATGATTTTGGCAGGTTATTGTCCTTAAGAAAATTAAATTTAGGTGGTAATAATTTTGTTCGGTTACCAGAAAGCATCTCTCAACTCTCCAAGCTTGAATATCTCAACTTGAGCAATTGTAGGAGGCTTCAATCGCTTCCTAAGCTGCCGTTAAGTGTTCGACATGTGAATGCAGAAGATTGTATTTCACTAATGGATTGCCAAAATCAATTCAAATTATGTACTTCAGCTGTCTCAGGAATGACGACTGTCAATTCCCTTAACTCATCCGAGAATCAAGAATATTGTACTTCAGTACCAAGATGTGTCTCAAGAACGTACACTTCTGCAGGCTTTGGAATCACTACTTTCAGTATATCATCTGAGCATCAACAATGGAAACCAAGTGTTGATTCATCGATGCCAACTCAACTGTTTCAAAACGACCTTGAATTATTGGATTGTAGGTCATATTCCATGAGCTCTGTTTGTGCTCTAAATGAAATTCCAGAGTGGTTCAGCAATGTAGTTACTGGCGATTCCATAGAAATCTCAATACCTTCAGATTTGAAAGATAATAAGAAGTGGATGGGGGTTGCTGCTGTTTTCTTAGTCAAAGGACACCCTGCTGTTTCCGACAGTGAATCAGATTCAGAAACTTCTGATTACTTATATAGATTCACATTGCGAACTCACGAGTTTCAACTGGAACCATATCTCCTTGACTGGAAAGAAAGTTGCACCTTTGTCAGATTTAATTCTGATCGTTTTCTTTGTTTATTCTATGTATCTCATATGCGCTTCCCAAGGATGTTAAATGAATCAAGTTCAATGTGGGCTTTATCGGAAACCAACAGCCTGTGCATGGAGATCCAGAAATGTGGGATTCGTCTTGTTTATGAGCAAGATGTTGCAGGGTTTATCCAAACATCTATGCGGTGTTTTGATGGAGGCCAACATCAAATTGTTCTACAGGAAGTTGATAAAGCTACATTTGAGAGTCTGGATGGTTTAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1211

Amino Acids

137.53

Weight (kDa)

6.18

Isoelectric Point (pI)

44.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 72
Acc36I ACCTGC 2 cut(s) 1536, 2637
AccB7I CCANNNNNTGG 1 cut(s) 2009
AccII CGCG 2 cut(s) 606, 1371
AccIII TCCGGA 1 cut(s) 1101
AciI CCGC 3 cut(s) 100, 535, 3550
AclWI GGATC 3 cut(s) 933, 1658, 3478
AcoI YGGCCR 3 cut(s) 955, 1226, 1399
AcsI RAATTY 7 cut(s) 1124, 1624, 1701, 1799, 2162, 2671, 3117
AcuI CTGAAG 5 cut(s) 1061, 2469, 2844, 2910, 3159
AcyI GRCGYC 2 cut(s) 50, 69
AfiI CCNNNNNNNGG 2 cut(s) 2009, 3478
AflII CTTAAG 2 cut(s) 2251, 2659
AflIII ACRYGT 2 cut(s) 1009, 2797
AjiI CACGTC 1 cut(s) 349
AjnI CCWGG 3 cut(s) 973, 1110, 1228
AjuI GAANNNNNNNTTGG 6 cut(s) 1313, 1345, 2153, 2185, 3010, 3042
AloI GAACNNNNNNTCC 2 cut(s) 3315, 3347
Alw21I GWGCWC 3 cut(s) 204, 3098, 3109
Alw26I GTCTC 5 cut(s) 2183, 2250, 2280, 2872, 2947
AlwI GGATC 3 cut(s) 933, 1658, 3478
Ama87I CYCGRG 1 cut(s) 1130
Aor13HI TCCGGA 1 cut(s) 1101
AoxI GGCC 6 cut(s) 955, 1165, 1226, 1256, 1399, 3565
ApeKI GCWGC 4 cut(s) 128, 455, 2779, 3212
ApoI RAATTY 7 cut(s) 1124, 1624, 1701, 1799, 2162, 2671, 3117
ArsI GACNNNNNNTTYG 2 cut(s) 259, 291
Asp700I GAANNNNTTC 5 cut(s) 519, 1074, 1097, 1125, 1509
AspLEI GCGC 1 cut(s) 3414
AspS9I GGNCC 2 cut(s) 971, 1606
AsuHPI GGTGA 3 cut(s) 451, 1991, 2221
AsuII TTCGAA 1 cut(s) 755
AvaI CYCGRG 1 cut(s) 1130
AvaII GGWCC 2 cut(s) 971, 1606
BaeI ACNNNNGTAYC 2 cut(s) 2913, 2946
BalI TGGCCA 3 cut(s) 957, 1228, 1401
BanII GRGCYC 2 cut(s) 204, 3098
BarI GAAGNNNNNNTAC 4 cut(s) 56, 88, 874, 906
BauI CACGAG 2 cut(s) 2542, 3308
BbsI GAAGAC 4 cut(s) 24, 64, 1436, 2060
Bbv12I GWGCWC 3 cut(s) 204, 3098, 3109
BbvI GCAGC 4 cut(s) 115, 442, 2766, 3199
BceAI ACGGC 2 cut(s) 224, 2767
BcgI CGANNNNNNTGC 2 cut(s) 1823, 1857
BciT130I CCWGG 3 cut(s) 975, 1112, 1230
BciVI GTATCC 1 cut(s) 714
BclI TGATCA 1 cut(s) 1920
BcoDI GTCTC 5 cut(s) 2183, 2250, 2280, 2872, 2947
BfaI CTAG 7 cut(s) 483, 1190, 1217, 1385, 2324, 2381, 2594
BfmI CTRYAG 2 cut(s) 2961, 3584
BfrI CTTAAG 2 cut(s) 2251, 2659
BfuAI ACCTGC 2 cut(s) 1536, 2637
BfuI GTATCC 1 cut(s) 714
BglII AGATCT 1 cut(s) 2014
BisI GCNGC 4 cut(s) 129, 456, 2780, 3213
BlsI GCNGC 4 cut(s) 130, 457, 2781, 3214
BmcAI AGTACT 1 cut(s) 1916
Bme1390I CCNGG 3 cut(s) 975, 1112, 1230
Bme18I GGWCC 2 cut(s) 971, 1606
BmeT110I CYCGRG 1 cut(s) 1130
BmgBI CACGTC 1 cut(s) 349
BmgT120I GGNCC 2 cut(s) 971, 1606
BmiI GGNNCC 2 cut(s) 1947, 3324
BmrFI CCNGG 3 cut(s) 975, 1112, 1230
BmrI ACTGGG 1 cut(s) 1950
BmsI GCATC 5 cut(s) 1464, 1821, 2718, 3010, 3024
BmuI ACTGGG 1 cut(s) 1950
BoxI GACNNNNGTC 2 cut(s) 1604, 2882
BpiI GAAGAC 4 cut(s) 24, 64, 1436, 2060
BplI GAGNNNNNCTC 2 cut(s) 2092, 2124
Bpu10I CCTNAGC 1 cut(s) 2775
Bpu14I TTCGAA 1 cut(s) 755
Bsa29I ATCGAT 2 cut(s) 2216, 3032
BsaAI YACGTR 1 cut(s) 725
BsaBI GATNNNNATC 2 cut(s) 508, 924
BsaHI GRCGYC 2 cut(s) 50, 69
BsaJI CCNNGG 4 cut(s) 974, 1609, 2464, 3419
BsaWI WCCGGW 1 cut(s) 1101
BsaXI ACNNNNNCTCC 2 cut(s) 3315, 3345
Bsc4I CCNNNNNNNGG 2 cut(s) 2009, 3478
Bse118I RCCGGY 1 cut(s) 473
Bse1I ACTGG 8 cut(s) 1409, 1747, 1945, 1992, 2232, 3151, 3324, 3344
Bse3DI GCAATG 3 cut(s) 1335, 3142, 3296
Bse8I GATNNNNATC 2 cut(s) 508, 924
BseAI TCCGGA 1 cut(s) 1101
BseBI CCWGG 3 cut(s) 975, 1112, 1230
BseCI ATCGAT 2 cut(s) 2216, 3032
BseDI CCNNGG 4 cut(s) 974, 1609, 2464, 3419
BseJI GATNNNNATC 2 cut(s) 508, 924
BseLI CCNNNNNNNGG 2 cut(s) 2009, 3478
BseMI GCAATG 3 cut(s) 1335, 3142, 3296
BseMII CTCAG 8 cut(s) 91, 351, 743, 1518, 2346, 2354, 2883, 2988
BseNI ACTGG 8 cut(s) 1409, 1747, 1945, 1992, 2232, 3151, 3324, 3344
BseRI GAGGAG 1 cut(s) 2399
BseXI GCAGC 4 cut(s) 115, 442, 2766, 3199
BsgI GTGCAG 2 cut(s) 441, 2542
Bsh1236I CGCG 2 cut(s) 606, 1371
BshFI GGCC 6 cut(s) 957, 1167, 1228, 1258, 1401, 3567
BshVI ATCGAT 2 cut(s) 2216, 3032
BsiHKAI GWGCWC 3 cut(s) 204, 3098, 3109
BsiHKCI CYCGRG 1 cut(s) 1130
BsiSI CCGG 2 cut(s) 474, 1102
BsiWI CGTACG 1 cut(s) 63
BslFI GGGAC 3 cut(s) 333, 1727, 2522
BslI CCNNNNNNNGG 2 cut(s) 2009, 3478
BsmAI GTCTC 5 cut(s) 2183, 2250, 2280, 2872, 2947
BsmFI GGGAC 3 cut(s) 333, 1727, 2522
BsmI GAATGC 3 cut(s) 308, 1834, 2809
BsnI GGCC 6 cut(s) 957, 1167, 1228, 1258, 1401, 3567
BsoBI CYCGRG 1 cut(s) 1130
Bsp119I TTCGAA 1 cut(s) 755
Bsp1286I GDGCHC 3 cut(s) 204, 3098, 3109
Bsp13I TCCGGA 1 cut(s) 1101
Bsp1407I TGTACA 1 cut(s) 1979
Bsp143I GATC 6 cut(s) 925, 1663, 1920, 2014, 3376, 3483
BspACI CCGC 3 cut(s) 100, 535, 3550
BspANI GGCC 6 cut(s) 957, 1167, 1228, 1258, 1401, 3567
BspCNI CTCAG 8 cut(s) 90, 352, 742, 1519, 2347, 2355, 2882, 2989
BspDI ATCGAT 2 cut(s) 2216, 3032
BspEI TCCGGA 1 cut(s) 1101
BspFNI CGCG 2 cut(s) 606, 1371
BspLI GGNNCC 2 cut(s) 1947, 3324
BspMAI CTGCAG 1 cut(s) 2965
BspMI ACCTGC 2 cut(s) 1536, 2637
BspPI GGATC 3 cut(s) 933, 1658, 3478
BspQI GCTCTTC 3 cut(s) 209, 276, 1080
BspT104I TTCGAA 1 cut(s) 755
BspTI CTTAAG 2 cut(s) 2251, 2659
BsrDI GCAATG 3 cut(s) 1335, 3142, 3296
BsrFI RCCGGY 1 cut(s) 473
BsrGI TGTACA 1 cut(s) 1979
BsrI ACTGG 8 cut(s) 1409, 1747, 1945, 1992, 2232, 3151, 3324, 3344
BssAI RCCGGY 1 cut(s) 473
BssECI CCNNGG 4 cut(s) 974, 1609, 2464, 3419
BssMI GATC 6 cut(s) 925, 1663, 1920, 2014, 3376, 3483
BssNI GRCGYC 2 cut(s) 50, 69
BssSI CACGAG 2 cut(s) 2542, 3308
BssT1I CCWWGG 2 cut(s) 1609, 3419
Bst2BI CACGAG 2 cut(s) 2542, 3308
Bst2UI CCWGG 3 cut(s) 975, 1112, 1230
Bst4CI ACNGT 6 cut(s) 529, 1406, 1603, 2884, 3048, 3254
Bst6I CTCTTC 3 cut(s) 209, 276, 1080
BstACI GRCGYC 2 cut(s) 50, 69
BstAFI CTTAAG 2 cut(s) 2251, 2659
BstAUI TGTACA 1 cut(s) 1979
BstBAI YACGTR 1 cut(s) 725
BstBI TTCGAA 1 cut(s) 755
BstC8I GCNNGC 4 cut(s) 288, 1534, 1883, 2965
BstEII GGTNACC 1 cut(s) 2697
BstFNI CGCG 2 cut(s) 606, 1371
BstHHI GCGC 1 cut(s) 3414
BstKTI GATC 6 cut(s) 928, 1666, 1923, 2017, 3379, 3486
BstMAI GTCTC 5 cut(s) 2183, 2250, 2280, 2872, 2947
BstMBI GATC 6 cut(s) 925, 1663, 1920, 2014, 3376, 3483
BstMWI GCNNNNNNNGC 5 cut(s) 660, 1542, 2529, 2767, 2776
BstNI CCWGG 3 cut(s) 975, 1112, 1230
BstNSI RCATGY 1 cut(s) 2801
BstPAI GACNNNNGTC 2 cut(s) 1604, 2882
BstPI GGTNACC 1 cut(s) 2697
BstSCI CCNGG 3 cut(s) 973, 1110, 1228
BstSFI CTRYAG 2 cut(s) 2961, 3584
BstSNI TACGTA 1 cut(s) 725
BstUI CGCG 2 cut(s) 606, 1371
BstV1I GCAGC 4 cut(s) 115, 442, 2766, 3199
BstV2I GAAGAC 4 cut(s) 24, 64, 1436, 2060
BstX2I RGATCY 2 cut(s) 2014, 3483
BstXI CCANNNNNNTGG 1 cut(s) 3494
BstYI RGATCY 2 cut(s) 2014, 3483
Bsu15I ATCGAT 2 cut(s) 2216, 3032
BsuI GTATCC 1 cut(s) 714
BsuRI GGCC 6 cut(s) 957, 1167, 1228, 1258, 1401, 3567
BsuTUI ATCGAT 2 cut(s) 2216, 3032
BtrI CACGTC 1 cut(s) 349
BtsIMutI CAGTG 4 cut(s) 546, 1402, 1938, 3259
BveI ACCTGC 2 cut(s) 1536, 2637
Cac8I GCNNGC 4 cut(s) 288, 1534, 1883, 2965
CfoI GCGC 1 cut(s) 3414
Cfr10I RCCGGY 1 cut(s) 473
Cfr13I GGNCC 2 cut(s) 971, 1606
ClaI ATCGAT 2 cut(s) 2216, 3032
CseI GACGC 1 cut(s) 58
CsiI ACCWGGT 1 cut(s) 1110
CspCI CAANNNNNGTGG 2 cut(s) 213, 248
DpnI GATC 6 cut(s) 927, 1665, 1922, 2016, 3378, 3485
DpnII GATC 6 cut(s) 925, 1663, 1920, 2014, 3376, 3483
DraI TTTAAA 2 cut(s) 421, 1782
EaeI YGGCCR 3 cut(s) 955, 1226, 1399
Eam1104I CTCTTC 3 cut(s) 209, 276, 1080
EarI CTCTTC 3 cut(s) 209, 276, 1080
Ecl136II GAGCTC 2 cut(s) 202, 3096
Eco105I TACGTA 1 cut(s) 725
Eco130I CCWWGG 2 cut(s) 1609, 3419
Eco147I AGGCCT 1 cut(s) 1258
Eco24I GRGCYC 2 cut(s) 204, 3098
Eco32I GATATC 2 cut(s) 820, 1567
Eco47I GGWCC 2 cut(s) 971, 1606
Eco53kI GAGCTC 2 cut(s) 202, 3096
Eco57I CTGAAG 5 cut(s) 1061, 2469, 2844, 2910, 3159
Eco88I CYCGRG 1 cut(s) 1130
Eco91I GGTNACC 1 cut(s) 2697
EcoICRI GAGCTC 2 cut(s) 202, 3096
EcoO65I GGTNACC 1 cut(s) 2697
EcoRII CCWGG 3 cut(s) 973, 1110, 1228
EcoRV GATATC 2 cut(s) 820, 1567
EcoT14I CCWWGG 2 cut(s) 1609, 3419
EcoT22I ATGCAT 2 cut(s) 1479, 1836
EcoT38I GRGCYC 2 cut(s) 204, 3098
ErhI CCWWGG 2 cut(s) 1609, 3419
FalI AAGNNNNNCTT 4 cut(s) 603, 635, 2563, 2595
FaqI GGGAC 3 cut(s) 333, 1727, 2522
FauI CCCGC 1 cut(s) 107
FauNDI CATATG 1 cut(s) 3408
FbaI TGATCA 1 cut(s) 1920
Fnu4HI GCNGC 4 cut(s) 129, 456, 2780, 3213
FriOI GRGCYC 2 cut(s) 204, 3098
Fsp4HI GCNGC 4 cut(s) 129, 456, 2780, 3213
FspBI CTAG 7 cut(s) 483, 1190, 1217, 1385, 2324, 2381, 2594
GlaI GCGC 1 cut(s) 3413
GluI GCNGC 4 cut(s) 129, 456, 2780, 3213
HaeIII GGCC 6 cut(s) 957, 1167, 1228, 1258, 1401, 3567
HapII CCGG 2 cut(s) 474, 1102
HgaI GACGC 1 cut(s) 58
HhaI GCGC 1 cut(s) 3414
Hin1I GRCGYC 2 cut(s) 50, 69
Hin6I GCGC 1 cut(s) 3412
HinP1I GCGC 1 cut(s) 3412
HindIII AAGCTT 2 cut(s) 1814, 2726
HpaII CCGG 2 cut(s) 474, 1102
HphI GGTGA 3 cut(s) 451, 1991, 2221
Hpy166II GTNNAC 3 cut(s) 1033, 1999, 2955
Hpy8I GTNNAC 3 cut(s) 1033, 1999, 2955
Hpy99I CGWCG 2 cut(s) 52, 71
HpyAV CCTTC 6 cut(s) 1108, 2144, 2470, 2493, 2575, 3183
HpyCH4III ACNGT 6 cut(s) 529, 1406, 1603, 2884, 3048, 3254
HpyCH4IV ACGT 6 cut(s) 62, 69, 348, 724, 1009, 2951
HpyF10VI GCNNNNNNNGC 5 cut(s) 660, 1542, 2529, 2767, 2776
HpySE526I ACGT 6 cut(s) 62, 69, 348, 724, 1009, 2951
Hsp92I GRCGYC 2 cut(s) 50, 69
HspAI GCGC 1 cut(s) 3412
Kpn2I TCCGGA 1 cut(s) 1101
Ksp22I TGATCA 1 cut(s) 1920
Kzo9I GATC 6 cut(s) 925, 1663, 1920, 2014, 3376, 3483
LguI GCTCTTC 3 cut(s) 209, 276, 1080
LmnI GCTCC 5 cut(s) 12, 199, 1878, 2386, 2624
Lsp1109I GCAGC 4 cut(s) 115, 442, 2766, 3199
LweI GCATC 5 cut(s) 1464, 1821, 2718, 3010, 3024
MabI ACCWGGT 1 cut(s) 1110
MaeI CTAG 7 cut(s) 483, 1190, 1217, 1385, 2324, 2381, 2594
MaeII ACGT 6 cut(s) 62, 69, 348, 724, 1009, 2951
MaeIII GTNAC 6 cut(s) 769, 1106, 1372, 1904, 2697, 3142
MalI GATC 6 cut(s) 927, 1665, 1922, 2016, 3378, 3485
MboI GATC 6 cut(s) 925, 1663, 1920, 2014, 3376, 3483
MfeI CAATTG 3 cut(s) 213, 938, 2749
MflI RGATCY 2 cut(s) 2014, 3483
MhlI GDGCHC 3 cut(s) 204, 3098, 3109
MlsI TGGCCA 3 cut(s) 957, 1228, 1401
MluNI TGGCCA 3 cut(s) 957, 1228, 1401
MlyI GAGTC 4 cut(s) 1901, 2074, 2121, 3622
MmeI TCCRAC 4 cut(s) 71, 1096, 2151, 3273
Mox20I TGGCCA 3 cut(s) 957, 1228, 1401
Mph1103I ATGCAT 2 cut(s) 1479, 1836
MroI TCCGGA 1 cut(s) 1101
MroXI GAANNNNTTC 5 cut(s) 519, 1074, 1097, 1125, 1509
MscI TGGCCA 3 cut(s) 957, 1228, 1401
MslI CAYNNNNRTG 3 cut(s) 123, 1898, 2802
Msp20I TGGCCA 3 cut(s) 957, 1228, 1401
MspA1I CMGCKG 1 cut(s) 2864
MspCI CTTAAG 2 cut(s) 2251, 2659
MspI CCGG 2 cut(s) 474, 1102
MspR9I CCNGG 3 cut(s) 975, 1112, 1230
MunI CAATTG 3 cut(s) 213, 938, 2749
Mva1269I GAATGC 3 cut(s) 308, 1834, 2809
MvaI CCWGG 3 cut(s) 975, 1112, 1230
MvnI CGCG 2 cut(s) 606, 1371
MwoI GCNNNNNNNGC 5 cut(s) 660, 1542, 2529, 2767, 2776
NdeI CATATG 1 cut(s) 3408
NdeII GATC 6 cut(s) 925, 1663, 1920, 2014, 3376, 3483
NlaIV GGNNCC 2 cut(s) 1947, 3324
NmeAIII GCCGAG 1 cut(s) 2307
NmuCI GTSAC 2 cut(s) 1106, 1904
NsiI ATGCAT 2 cut(s) 1479, 1836
NspI RCATGY 1 cut(s) 2801
NspV TTCGAA 1 cut(s) 755
PaeR7I CTCGAG 1 cut(s) 1130
PceI AGGCCT 1 cut(s) 1258
PciI ACATGT 1 cut(s) 2797
PciSI GCTCTTC 3 cut(s) 209, 276, 1080
PctI GAATGC 3 cut(s) 308, 1834, 2809
PdmI GAANNNNTTC 5 cut(s) 519, 1074, 1097, 1125, 1509
Pfl23II CGTACG 1 cut(s) 63
PflMI CCANNNNNTGG 1 cut(s) 2009
PkrI GCNGC 4 cut(s) 130, 457, 2781, 3214
PleI GAGTC 4 cut(s) 1901, 2073, 2121, 3621
PpsI GAGTC 4 cut(s) 1901, 2073, 2121, 3621
Ppu21I YACGTR 1 cut(s) 725
PscI ACATGT 1 cut(s) 2797
PshAI GACNNNNGTC 2 cut(s) 1604, 2882
Psp124BI GAGCTC 2 cut(s) 204, 3098
Psp6I CCWGG 3 cut(s) 973, 1110, 1228
PspEI GGTNACC 1 cut(s) 2697
PspGI CCWGG 3 cut(s) 973, 1110, 1228
PspLI CGTACG 1 cut(s) 63
PspN4I GGNNCC 2 cut(s) 1947, 3324
PspPI GGNCC 2 cut(s) 971, 1606
PstI CTGCAG 1 cut(s) 2965
PsuI RGATCY 2 cut(s) 2014, 3483
PvuII CAGCTG 1 cut(s) 2864
RseI CAYNNNNRTG 3 cut(s) 123, 1898, 2802
SacI GAGCTC 2 cut(s) 204, 3098
SapI GCTCTTC 3 cut(s) 209, 276, 1080
SatI GCNGC 4 cut(s) 129, 456, 2780, 3213
Sau3AI GATC 6 cut(s) 925, 1663, 1920, 2014, 3376, 3483
Sau96I GGNCC 2 cut(s) 971, 1606
ScaI AGTACT 1 cut(s) 1916
SchI GAGTC 4 cut(s) 1901, 2074, 2121, 3622
ScrFI CCNGG 3 cut(s) 975, 1112, 1230
SduI GDGCHC 3 cut(s) 204, 3098, 3109
SexAI ACCWGGT 1 cut(s) 1110
SfaNI GCATC 5 cut(s) 1464, 1821, 2718, 3010, 3024
SfcI CTRYAG 2 cut(s) 2961, 3584
Sfr274I CTCGAG 1 cut(s) 1130
SfuI TTCGAA 1 cut(s) 755
SinI GGWCC 2 cut(s) 971, 1606
SlaI CTCGAG 1 cut(s) 1130
SmiMI CAYNNNNRTG 3 cut(s) 123, 1898, 2802
SnaBI TACGTA 1 cut(s) 725
SseBI AGGCCT 1 cut(s) 1258
SsiI CCGC 3 cut(s) 100, 535, 3550
SspI AATATT 4 cut(s) 541, 1326, 2297, 2918
SspMI CTAG 7 cut(s) 483, 1190, 1217, 1385, 2324, 2381, 2594
SstI GAGCTC 2 cut(s) 204, 3098
StuI AGGCCT 1 cut(s) 1258
StyD4I CCNGG 3 cut(s) 973, 1110, 1228
StyI CCWWGG 2 cut(s) 1609, 3419
TaaI ACNGT 6 cut(s) 529, 1406, 1603, 2884, 3048, 3254
TaiI ACGT 6 cut(s) 65, 72, 351, 727, 1012, 2954
TaqII GACCGA 1 cut(s) 959
TatI WGTACW 5 cut(s) 890, 1914, 1979, 2855, 2921
TscAI CASTG 4 cut(s) 553, 1409, 1945, 3259
TseFI GTSAC 2 cut(s) 1106, 1904
TseI GCWGC 4 cut(s) 128, 455, 2779, 3212
Tsp45I GTSAC 2 cut(s) 1106, 1904
TspGWI ACGGA 2 cut(s) 107, 1314
TspRI CASTG 4 cut(s) 553, 1409, 1945, 3259
Van91I CCANNNNNTGG 1 cut(s) 2009
Vha464I CTTAAG 2 cut(s) 2251, 2659
VpaK11BI GGWCC 2 cut(s) 971, 1606
XapI RAATTY 7 cut(s) 1124, 1624, 1701, 1799, 2162, 2671, 3117
XbaI TCTAGA 2 cut(s) 482, 2380
XceI RCATGY 1 cut(s) 2801
XcmI CCANNNNNNNNNTGG 1 cut(s) 497
XhoI CTCGAG 1 cut(s) 1130
XmnI GAANNNNTTC 5 cut(s) 519, 1074, 1097, 1125, 1509
XspI CTAG 7 cut(s) 483, 1190, 1217, 1385, 2324, 2381, 2594
ZraI GACGTC 1 cut(s) 70
ZrmI AGTACT 1 cut(s) 1916
Zsp2I ATGCAT 2 cut(s) 1479, 1836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.