Rmu_sc0005071.1_g000019

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005071.1
OG0000129
Physical Location & Seq
Forward (+)
82793 .. 86114
3322 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005071.1_g000019.1.cds

Sequence Viewer

Length: 2478 bp
atgactaccaaaatagatcttccttcttctcttcctcctccatttcataaactgacatacgatgtgttcctcagttttagaggtacagatacccgcacaaatttcacagaccatctttatgccgctctcaaacaaaaaggaatatacacatttagagatgatgaagaacttaacagtggggaatcaattggcccaaatctcttggaagcaattcaagagtcaagatatgtaattgtggtgttttctcataactacgccgattcttcgtggtgtttggatgagcttgcaaaagtagctgaatgcaggagagccatgggacaaacagtccttccagtgttctaccatgttgatccatctgatgtacgaagacaaactggggagcactttgggaaagcatttgagaagcatcaagagcggtttggaggcaatcctgacaaattgcagaggtggaaagacgctcttgctgaagtaggcaatctctctggatggcatctgcaaaatgggtacgaatccaaagtcattcaagaaattgttggaaagattttcactgagttaaatcaaataatctcaatatctaaggatttatttgggatggattctcacctgaatgaaatgctttcgtacttagacattgggtgtcctgatgttcgtatcataggaatttgtggtattggtggtatcggtaagacaactattgcacaattggtctttgaaagggtacgggctcagtttgaaggttgcagctttcttgagaatgttagagaggtaactgaaaagcaaggtgtggttcatttgcaagagaaacttctcttgaacttgctgaatagtaatgacaatgtacagtacactaaaatgggaaaagacataattaagcatagactatctactaaaagggtgcttattattcttgatgatgtggaccaagaagaacaattggaagcgttgtgtgataaggaatcgtttggtccagggagtagaatcatcataacttgtagagatgaacatttgctcagtgcagttgaaggagataaagtatataaggtgaatccattaactgatgctgaagctcttcagctcttcagtatgaaagccttcaagaaagaccagcaggttgggaaagaatttctcaagctatccaagaaatttttgaaatatgctgatggccttccactagctattaaagttttgggctcctctgttcgtaatagaagtatagataaatggtcaagtgcattggaaagacttgaagaaagtcctgataaaaaaattattaatgttctcaaggtcagttttgatggattagaaccaagggaacagaaaatttttttggacatcgcatgtttccttaaaggggtgaacatagatcgtgtaagaagaatactacagggtagtaatgcccactgtccagactttgatatacaggttctcctggacaaatctatggtaactctatttggagaaaaattgtggatgcatgatttgatacaagaaatgggtcgagaagttgttcttcaagaatgccgtgaagagcctggaaaacgtagcaggttgtggcttcctaaagaaatcatccatgtacttggtcggagtaaggcgacgagtgcagttcaaagcatattcctccaatgtccaacaaaagacaatgttgttcactcaattgatattgccttctcaaacatggacagattgaggttgctcaagatttggaatttgaagtgtaccggaaacatcagatatctttctaatgagttgcagtatcttgaatggcatgagtgtcctttggtttctttcccgtcagactttcaaccggataaacttgtggaagttcacatgtgtttcagccacatcgaacaactatggagaggaaaaaagggatggagcatgctacggcttattgatctaactggttcacaatacttgatgtcgactccagacttcactgaggttcctgatcttgaaacgttggtgcttcaatgttgtacaagcttggtggaggttcacccgtctcttggatttctgaagaaacttgtctctttgaatatgacatgttgcatgtctattgagagccttccacctttcactgccttggaatcccttcaaatattgaggctttcattctgttcagcactgaagaagtttccagaaattgaaggaaatatgaaaagcttgctggagctttatttggatgggaccagcattgaggaattgcctccatcaattgaacgcttgactggtcttaccatgttgagtctagcacactgtaaaaaccttttgcatcttcccaatgcaattgggtgcctgacatctttgaaaagtctccatctaacaggttgctccaatattgatgagatacctgagaatctgaatggtctgaaatgtctggagacgcttgcaattggtggaacttccataagggatttatctttcattgtaggcatgaagaatctacagtatctatcctgcccaggatcagcctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

825

Amino Acids

93.31

Weight (kDa)

6.05

Isoelectric Point (pI)

44.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1099, 1536
AccB1I GGYRCC 1 cut(s) 2295
AccBSI CCGCTC 2 cut(s) 125, 415
AccI GTMKAC 1 cut(s) 1925
AciI CCGC 3 cut(s) 94, 123, 415
AclI AACGTT 1 cut(s) 1961
AclWI GGATC 2 cut(s) 344, 2476
AcsI RAATTY 6 cut(s) 100, 660, 1121, 1142, 1320, 1708
AcuI CTGAAG 6 cut(s) 486, 1055, 1063, 1083, 2039, 2150
AfiI CCNNNNNNNGG 2 cut(s) 1351, 2009
AflIII ACRYGT 2 cut(s) 1830, 2045
AhdI GACNNNNNGTC 1 cut(s) 323
AjnI CCWGG 4 cut(s) 967, 1428, 1531, 2464
AjuI GAANNNNNNNTTGG 2 cut(s) 1310, 1342
Alw21I GWGCWC 1 cut(s) 384
Alw26I GTCTC 4 cut(s) 2010, 2035, 2321, 2378
AlwI GGATC 2 cut(s) 344, 2476
AoxI GGCC 2 cut(s) 190, 1162
ApeKI GCWGC 1 cut(s) 741
ApoI RAATTY 6 cut(s) 100, 660, 1121, 1142, 1320, 1708
ArsI GACNNNNNNTTYG 2 cut(s) 501, 533
AseI ATTAAT 1 cut(s) 1272
Asp700I GAANNNNTTC 5 cut(s) 210, 1068, 1091, 1506, 2094
AspS9I GGNCC 4 cut(s) 191, 919, 965, 2190
AsuHPI GGTGA 4 cut(s) 593, 1054, 1366, 1991
AvaII GGWCC 3 cut(s) 919, 965, 2190
BanI GGYRCC 1 cut(s) 2295
BanII GRGCYC 2 cut(s) 727, 1193
BbsI GAAGAC 1 cut(s) 373
Bbv12I GWGCWC 1 cut(s) 384
BbvI GCAGC 1 cut(s) 753
BceAI ACGGC 2 cut(s) 1506, 1904
BciT130I CCWGG 4 cut(s) 969, 1430, 1533, 2466
BcoDI GTCTC 4 cut(s) 2010, 2035, 2321, 2378
BfaI CTAG 2 cut(s) 1172, 2252
BfmI CTRYAG 2 cut(s) 1382, 2447
BfuAI ACCTGC 2 cut(s) 1099, 1536
BglII AGATCT 1 cut(s) 16
BisI GCNGC 2 cut(s) 123, 742
BlsI GCNGC 2 cut(s) 124, 743
Bme1390I CCNGG 4 cut(s) 969, 1430, 1533, 2466
Bme18I GGWCC 3 cut(s) 919, 965, 2190
BmeRI GACNNNNNGTC 1 cut(s) 323
BmgT120I GGNCC 4 cut(s) 191, 919, 965, 2190
BmiI GGNNCC 4 cut(s) 1192, 1947, 2191, 2297
BmrFI CCNGG 4 cut(s) 969, 1430, 1533, 2466
BmrI ACTGGG 1 cut(s) 384
BmsI GCATC 5 cut(s) 415, 499, 1048, 1461, 2284
BmuI ACTGGG 1 cut(s) 384
BpiI GAAGAC 1 cut(s) 373
BpmI CTGGAG 3 cut(s) 1914, 2192, 2402
BpuEI CTTGAG 4 cut(s) 770, 1112, 1265, 1682
BsaJI CCNNGG 5 cut(s) 312, 968, 1307, 2085, 2464
BsaWI WCCGGW 2 cut(s) 1721, 1807
BsaXI ACNNNNNCTCC 4 cut(s) 1017, 1047, 1410, 1440
Bsc4I CCNNNNNNNGG 2 cut(s) 1351, 2009
Bse1I ACTGG 4 cut(s) 332, 379, 1909, 2236
BseBI CCWGG 4 cut(s) 969, 1430, 1533, 2466
BseDI CCNNGG 5 cut(s) 312, 968, 1307, 2085, 2464
BseGI GGATG 7 cut(s) 283, 491, 597, 1476, 1569, 1880, 2191
BseLI CCNNNNNNNGG 2 cut(s) 1351, 2009
BseMII CTCAG 6 cut(s) 85, 540, 740, 1024, 1932, 2346
BseNI ACTGG 4 cut(s) 332, 379, 1909, 2236
BseRI GAGGAG 2 cut(s) 27, 1183
BseXI GCAGC 1 cut(s) 753
BsgI GTGCAG 2 cut(s) 1035, 1623
BshFI GGCC 2 cut(s) 192, 1164
BshNI GGYRCC 1 cut(s) 2295
BsiHKAI GWGCWC 1 cut(s) 384
BsiSI CCGG 2 cut(s) 1722, 1808
BslFI GGGAC 2 cut(s) 330, 2203
BslI CCNNNNNNNGG 2 cut(s) 1351, 2009
BsmAI GTCTC 4 cut(s) 2010, 2035, 2321, 2378
BsmBI CGTCTC 2 cut(s) 2010, 2378
BsmFI GGGAC 2 cut(s) 330, 2203
BsmI GAATGC 2 cut(s) 305, 1523
BsnI GGCC 2 cut(s) 192, 1164
Bsp1286I GDGCHC 3 cut(s) 384, 727, 1193
Bsp1407I TGTACA 2 cut(s) 838, 1979
Bsp143I GATC 6 cut(s) 16, 349, 1363, 1897, 1951, 2468
Bsp19I CCATGG 1 cut(s) 312
BspACI CCGC 3 cut(s) 94, 123, 415
BspANI GGCC 2 cut(s) 192, 1164
BspCNI CTCAG 6 cut(s) 84, 541, 739, 1023, 1933, 2347
BspLI GGNNCC 4 cut(s) 1192, 1947, 2191, 2297
BspMI ACCTGC 2 cut(s) 1099, 1536
BspPI GGATC 2 cut(s) 344, 2476
BspQI GCTCTTC 3 cut(s) 1074, 1082, 1521
BspT107I GGYRCC 1 cut(s) 2295
BsrBI CCGCTC 2 cut(s) 125, 415
BsrGI TGTACA 2 cut(s) 838, 1979
BsrI ACTGG 4 cut(s) 332, 379, 1909, 2236
BssECI CCNNGG 5 cut(s) 312, 968, 1307, 2085, 2464
BssMI GATC 6 cut(s) 16, 349, 1363, 1897, 1951, 2468
BssT1I CCWWGG 3 cut(s) 312, 1307, 2085
Bst2UI CCWGG 4 cut(s) 969, 1430, 1533, 2466
Bst4CI ACNGT 6 cut(s) 176, 325, 843, 1403, 2261, 2451
Bst6I CTCTTC 4 cut(s) 36, 1074, 1082, 1521
BstAUI TGTACA 2 cut(s) 838, 1979
BstC8I GCNNGC 4 cut(s) 285, 1883, 2168, 2391
BstDEI CTNAG 8 cut(s) 71, 549, 576, 625, 726, 1010, 1941, 2355
BstDSI CCRYGG 1 cut(s) 312
BstF5I GGATG 7 cut(s) 283, 491, 597, 1476, 1569, 1880, 2191
BstKTI GATC 6 cut(s) 19, 352, 1366, 1900, 1954, 2471
BstMAI GTCTC 4 cut(s) 2010, 2035, 2321, 2378
BstMBI GATC 6 cut(s) 16, 349, 1363, 1897, 1951, 2468
BstMWI GCNNNNNNNGC 3 cut(s) 293, 412, 1601
BstNI CCWGG 4 cut(s) 969, 1430, 1533, 2466
BstNSI RCATGY 5 cut(s) 1341, 1834, 1885, 2049, 2056
BstSCI CCNGG 4 cut(s) 967, 1428, 1531, 2464
BstSFI CTRYAG 2 cut(s) 1382, 2447
BstV1I GCAGC 1 cut(s) 753
BstV2I GAAGAC 1 cut(s) 373
BstX2I RGATCY 1 cut(s) 16
BstXI CCANNNNNNTGG 2 cut(s) 1112, 1580
BstYI RGATCY 1 cut(s) 16
BsuRI GGCC 2 cut(s) 192, 1164
BtgI CCRYGG 1 cut(s) 312
BtgZI GCGATG 1 cut(s) 1318
BtsCI GGATG 7 cut(s) 283, 491, 597, 1476, 1569, 1880, 2191
BtsI GCAGTG 1 cut(s) 2079
BtsIMutI CAGTG 9 cut(s) 181, 339, 546, 1018, 1399, 1938, 2079, 2126, 2257
BveI ACCTGC 2 cut(s) 1099, 1536
Cac8I GCNNGC 4 cut(s) 285, 1883, 2168, 2391
Cfr13I GGNCC 4 cut(s) 191, 919, 965, 2190
CseI GACGC 2 cut(s) 464, 2395
CspCI CAANNNNNGTGG 2 cut(s) 1971, 2006
DdeI CTNAG 8 cut(s) 71, 549, 576, 625, 726, 1010, 1941, 2355
DpnI GATC 6 cut(s) 18, 351, 1365, 1899, 1953, 2470
DpnII GATC 6 cut(s) 16, 349, 1363, 1897, 1951, 2468
DriI GACNNNNNGTC 1 cut(s) 323
Eam1104I CTCTTC 4 cut(s) 36, 1074, 1082, 1521
Eam1105I GACNNNNNGTC 1 cut(s) 323
EarI CTCTTC 4 cut(s) 36, 1074, 1082, 1521
Eco130I CCWWGG 3 cut(s) 312, 1307, 2085
Eco24I GRGCYC 2 cut(s) 727, 1193
Eco32I GATATC 1 cut(s) 1736
Eco47I GGWCC 3 cut(s) 919, 965, 2190
Eco57I CTGAAG 6 cut(s) 486, 1055, 1063, 1083, 2039, 2150
EcoRII CCWGG 4 cut(s) 967, 1428, 1531, 2464
EcoRV GATATC 1 cut(s) 1736
EcoT14I CCWWGG 3 cut(s) 312, 1307, 2085
EcoT22I ATGCAT 1 cut(s) 1476
EcoT38I GRGCYC 2 cut(s) 727, 1193
ErhI CCWWGG 3 cut(s) 312, 1307, 2085
Esp3I CGTCTC 2 cut(s) 2010, 2378
FalI AAGNNNNNCTT 6 cut(s) 444, 476, 789, 821, 1494, 1526
FaqI GGGAC 2 cut(s) 330, 2203
FauI CCCGC 1 cut(s) 101
FblI GTMKAC 1 cut(s) 1925
Fnu4HI GCNGC 2 cut(s) 123, 742
FokI GGATG 7 cut(s) 290, 498, 604, 1483, 1556, 1887, 2198
FriOI GRGCYC 2 cut(s) 727, 1193
Fsp4HI GCNGC 2 cut(s) 123, 742
FspBI CTAG 2 cut(s) 1172, 2252
GluI GCNGC 2 cut(s) 123, 742
GsuI CTGGAG 3 cut(s) 1914, 2192, 2402
HaeIII GGCC 2 cut(s) 192, 1164
HapII CCGG 2 cut(s) 1722, 1808
HgaI GACGC 2 cut(s) 464, 2395
HincII GTYRAC 1 cut(s) 1926
HindII GTYRAC 1 cut(s) 1926
HindIII AAGCTT 2 cut(s) 1984, 2164
HpaII CCGG 2 cut(s) 1722, 1808
HphI GGTGA 4 cut(s) 593, 1054, 1366, 1991
Hpy166II GTNNAC 9 cut(s) 846, 919, 1357, 1651, 1719, 1828, 1910, 1926, 1999
Hpy188I TCNGA 7 cut(s) 358, 1587, 1733, 1798, 2019, 2364, 2373
Hpy8I GTNNAC 9 cut(s) 846, 919, 1357, 1651, 1719, 1828, 1910, 1926, 1999
Hpy99I CGWCG 1 cut(s) 1600
HpyCH4III ACNGT 6 cut(s) 176, 325, 843, 1403, 2261, 2451
HpyCH4IV ACGT 2 cut(s) 1540, 1961
HpyF10VI GCNNNNNNNGC 3 cut(s) 293, 412, 1601
HpyF3I CTNAG 8 cut(s) 71, 549, 576, 625, 726, 1010, 1941, 2355
HpySE526I ACGT 2 cut(s) 1540, 1961
Kzo9I GATC 6 cut(s) 16, 349, 1363, 1897, 1951, 2468
LguI GCTCTTC 3 cut(s) 1074, 1082, 1521
LmnI GCTCC 5 cut(s) 379, 1196, 1878, 2173, 2339
Lsp1109I GCAGC 1 cut(s) 753
LweI GCATC 5 cut(s) 415, 499, 1048, 1461, 2284
MaeI CTAG 2 cut(s) 1172, 2252
MaeII ACGT 2 cut(s) 1540, 1961
MaeIII GTNAC 2 cut(s) 766, 1444
MalI GATC 6 cut(s) 18, 351, 1365, 1899, 1953, 2470
MbiI CCGCTC 2 cut(s) 125, 415
MboI GATC 6 cut(s) 16, 349, 1363, 1897, 1951, 2468
MfeI CAATTG 7 cut(s) 186, 701, 932, 1656, 2217, 2289, 2394
MflI RGATCY 1 cut(s) 16
MhlI GDGCHC 3 cut(s) 384, 727, 1193
MlyI GAGTC 3 cut(s) 227, 1921, 2257
MmeI TCCRAC 3 cut(s) 514, 1565, 1655
Mph1103I ATGCAT 1 cut(s) 1476
MroXI GAANNNNTTC 5 cut(s) 210, 1068, 1091, 1506, 2094
MseI TTAA 7 cut(s) 171, 554, 870, 1052, 1179, 1272, 1347
MslI CAYNNNNRTG 3 cut(s) 117, 606, 851
MspI CCGG 2 cut(s) 1722, 1808
MspR9I CCNGG 4 cut(s) 969, 1430, 1533, 2466
MunI CAATTG 7 cut(s) 186, 701, 932, 1656, 2217, 2289, 2394
Mva1269I GAATGC 2 cut(s) 305, 1523
MvaI CCWGG 4 cut(s) 969, 1430, 1533, 2466
MwoI GCNNNNNNNGC 3 cut(s) 293, 412, 1601
NcoI CCATGG 1 cut(s) 312
NdeII GATC 6 cut(s) 16, 349, 1363, 1897, 1951, 2468
NlaIV GGNNCC 4 cut(s) 1192, 1947, 2191, 2297
NsiI ATGCAT 1 cut(s) 1476
NspI RCATGY 5 cut(s) 1341, 1834, 1885, 2049, 2056
PaeI GCATGC 1 cut(s) 1885
PciI ACATGT 2 cut(s) 1830, 2045
PciSI GCTCTTC 3 cut(s) 1074, 1082, 1521
PctI GAATGC 2 cut(s) 305, 1523
PdmI GAANNNNTTC 5 cut(s) 210, 1068, 1091, 1506, 2094
PfoI TCCNGGA 1 cut(s) 1428
PkrI GCNGC 2 cut(s) 124, 743
PleI GAGTC 3 cut(s) 226, 1921, 2256
PpsI GAGTC 3 cut(s) 226, 1921, 2256
PscI ACATGT 2 cut(s) 1830, 2045
PshBI ATTAAT 1 cut(s) 1272
Psp1406I AACGTT 1 cut(s) 1961
Psp6I CCWGG 4 cut(s) 967, 1428, 1531, 2464
PspGI CCWGG 4 cut(s) 967, 1428, 1531, 2464
PspN4I GGNNCC 4 cut(s) 1192, 1947, 2191, 2297
PspPI GGNCC 4 cut(s) 191, 919, 965, 2190
PsuI RGATCY 1 cut(s) 16
RseI CAYNNNNRTG 3 cut(s) 117, 606, 851
SalI GTCGAC 1 cut(s) 1924
SapI GCTCTTC 3 cut(s) 1074, 1082, 1521
SaqAI TTAA 7 cut(s) 171, 554, 870, 1052, 1179, 1272, 1347
SatI GCNGC 2 cut(s) 123, 742
Sau3AI GATC 6 cut(s) 16, 349, 1363, 1897, 1951, 2468
Sau96I GGNCC 4 cut(s) 191, 919, 965, 2190
SchI GAGTC 3 cut(s) 227, 1921, 2257
ScrFI CCNGG 4 cut(s) 969, 1430, 1533, 2466
SduI GDGCHC 3 cut(s) 384, 727, 1193
SfaNI GCATC 5 cut(s) 415, 499, 1048, 1461, 2284
SfcI CTRYAG 2 cut(s) 1382, 2447
SinI GGWCC 3 cut(s) 919, 965, 2190
SmiMI CAYNNNNRTG 3 cut(s) 117, 606, 851
SmlI CTYRAG 4 cut(s) 749, 1127, 1280, 1697
SmoI CTYRAG 4 cut(s) 749, 1127, 1280, 1697
SphI GCATGC 1 cut(s) 1885
SsiI CCGC 3 cut(s) 94, 123, 415
SspI AATATT 2 cut(s) 2103, 2341
SspMI CTAG 2 cut(s) 1172, 2252
StyD4I CCNGG 4 cut(s) 967, 1428, 1531, 2464
StyI CCWWGG 3 cut(s) 312, 1307, 2085
TaaI ACNGT 6 cut(s) 176, 325, 843, 1403, 2261, 2451
TaiI ACGT 2 cut(s) 1543, 1964
TaqI TCGA 3 cut(s) 1498, 1848, 1925
TatI WGTACW 4 cut(s) 838, 843, 1576, 1979
TauI GCSGC 1 cut(s) 125
Tru1I TTAA 7 cut(s) 171, 554, 870, 1052, 1179, 1272, 1347
Tru9I TTAA 7 cut(s) 171, 554, 870, 1052, 1179, 1272, 1347
TscAI CASTG 9 cut(s) 181, 339, 553, 1018, 1406, 1945, 2086, 2133, 2264
TseI GCWGC 1 cut(s) 741
TspRI CASTG 9 cut(s) 181, 339, 553, 1018, 1406, 1945, 2086, 2133, 2264
VpaK11BI GGWCC 3 cut(s) 919, 965, 2190
VspI ATTAAT 1 cut(s) 1272
XapI RAATTY 6 cut(s) 100, 660, 1121, 1142, 1320, 1708
XceI RCATGY 5 cut(s) 1341, 1834, 1885, 2049, 2056
XmiI GTMKAC 1 cut(s) 1925
XmnI GAANNNNTTC 5 cut(s) 210, 1068, 1091, 1506, 2094
XspI CTAG 2 cut(s) 1172, 2252
Zsp2I ATGCAT 1 cut(s) 1476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.