protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 416 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 180 |
| Acc36I | ACCTGC | 1 cut(s) | 142 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 349 |
| AccI | GTMKAC | 1 cut(s) | 286 |
| AciI | CCGC | 2 cut(s) | 77, 161 |
| AcsI | RAATTY | 4 cut(s) | 12, 396, 480, 650 |
| AcuI | CTGAAG | 1 cut(s) | 678 |
| AcvI | CACGTG | 1 cut(s) | 494 |
| AcyI | GRCGYC | 1 cut(s) | 51 |
| AfaI | GTAC | 2 cut(s) | 784, 850 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 47, 349, 484, 553 |
| AgsI | TTSAA | 3 cut(s) | 211, 362, 518 |
| AjnI | CCWGG | 3 cut(s) | 19, 382, 601 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 119, 151, 336, 368 |
| AluBI | AGCT | 2 cut(s) | 757, 770 |
| AluI | AGCT | 2 cut(s) | 757, 770 |
| Alw26I | GTCTC | 1 cut(s) | 78 |
| AoxI | GGCC | 2 cut(s) | 380, 475 |
| ApoI | RAATTY | 4 cut(s) | 12, 396, 480, 650 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 556 |
| AspS9I | GGNCC | 2 cut(s) | 140, 488 |
| AsuC2I | CCSGG | 1 cut(s) | 48 |
| AsuHPI | GGTGA | 1 cut(s) | 828 |
| AsuNHI | GCTAGC | 1 cut(s) | 118 |
| AvaII | GGWCC | 2 cut(s) | 140, 488 |
| BanII | GRGCYC | 2 cut(s) | 803, 815 |
| BauI | CACGAG | 1 cut(s) | 219 |
| BbrPI | CACGTG | 1 cut(s) | 494 |
| BbvCI | CCTCAGC | 1 cut(s) | 758 |
| BccI | CCATC | 3 cut(s) | 300, 343, 367 |
| BceAI | ACGGC | 1 cut(s) | 610 |
| BciT130I | CCWGG | 3 cut(s) | 21, 384, 603 |
| BciVI | GTATCC | 1 cut(s) | 48 |
| BcnI | CCSGG | 1 cut(s) | 48 |
| BcoDI | GTCTC | 1 cut(s) | 78 |
| BfaI | CTAG | 2 cut(s) | 119, 701 |
| BfuAI | ACCTGC | 1 cut(s) | 142 |
| BfuI | GTATCC | 1 cut(s) | 48 |
| BisI | GCNGC | 1 cut(s) | 161 |
| BlsI | GCNGC | 1 cut(s) | 162 |
| Bme1390I | CCNGG | 4 cut(s) | 21, 48, 384, 603 |
| Bme18I | GGWCC | 2 cut(s) | 140, 488 |
| BmgT120I | GGNCC | 2 cut(s) | 140, 488 |
| BmiI | GGNNCC | 3 cut(s) | 141, 354, 489 |
| BmrFI | CCNGG | 4 cut(s) | 21, 48, 384, 603 |
| BmsI | GCATC | 1 cut(s) | 68 |
| BmtI | GCTAGC | 1 cut(s) | 122 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 33 |
| BpmI | CTGGAG | 1 cut(s) | 108 |
| Bpu10I | CCTNAGC | 1 cut(s) | 758 |
| BpuEI | CTTGAG | 2 cut(s) | 260, 698 |
| BpuMI | CCSGG | 1 cut(s) | 48 |
| BsaAI | YACGTR | 1 cut(s) | 494 |
| BsaHI | GRCGYC | 1 cut(s) | 51 |
| BsaI | GGTCTC | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 3 cut(s) | 20, 383, 547 |
| BsaWI | WCCGGW | 1 cut(s) | 442 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 293, 323 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 47, 349, 484, 553 |
| Bse1I | ACTGG | 1 cut(s) | 34 |
| BseBI | CCWGG | 3 cut(s) | 21, 384, 603 |
| BseDI | CCNNGG | 3 cut(s) | 20, 383, 547 |
| BseGI | GGATG | 3 cut(s) | 311, 354, 730 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 47, 349, 484, 553 |
| BseMII | CTCAG | 1 cut(s) | 749 |
| BseNI | ACTGG | 1 cut(s) | 34 |
| BsgI | GTGCAG | 2 cut(s) | 170, 243 |
| BshFI | GGCC | 2 cut(s) | 382, 477 |
| BsiSI | CCGG | 2 cut(s) | 48, 443 |
| BslFI | GGGAC | 3 cut(s) | 38, 153, 501 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 47, 349, 484, 553 |
| BsmAI | GTCTC | 1 cut(s) | 78 |
| BsmFI | GGGAC | 3 cut(s) | 38, 153, 501 |
| BsmI | GAATGC | 1 cut(s) | 321 |
| BsnI | GGCC | 2 cut(s) | 382, 477 |
| Bso31I | GGTCTC | 1 cut(s) | 78 |
| Bsp1286I | GDGCHC | 2 cut(s) | 803, 815 |
| Bsp143I | GATC | 5 cut(s) | 91, 189, 226, 260, 736 |
| BspACI | CCGC | 2 cut(s) | 77, 161 |
| BspANI | GGCC | 2 cut(s) | 382, 477 |
| BspCNI | CTCAG | 1 cut(s) | 750 |
| BspHI | TCATGA | 2 cut(s) | 184, 229 |
| BspLI | GGNNCC | 3 cut(s) | 141, 354, 489 |
| BspMI | ACCTGC | 1 cut(s) | 142 |
| BspOI | GCTAGC | 1 cut(s) | 122 |
| BspTNI | GGTCTC | 1 cut(s) | 78 |
| BsrI | ACTGG | 1 cut(s) | 34 |
| BssECI | CCNNGG | 3 cut(s) | 20, 383, 547 |
| BssMI | GATC | 5 cut(s) | 91, 189, 226, 260, 736 |
| BssNI | GRCGYC | 1 cut(s) | 51 |
| BssSI | CACGAG | 1 cut(s) | 219 |
| Bst2BI | CACGAG | 1 cut(s) | 219 |
| Bst2UI | CCWGG | 3 cut(s) | 21, 384, 603 |
| Bst6I | CTCTTC | 2 cut(s) | 576, 789 |
| BstACI | GRCGYC | 1 cut(s) | 51 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 157 |
| BstBAI | YACGTR | 1 cut(s) | 494 |
| BstC8I | GCNNGC | 2 cut(s) | 120, 676 |
| BstDEI | CTNAG | 3 cut(s) | 179, 758, 821 |
| BstF5I | GGATG | 3 cut(s) | 311, 354, 730 |
| BstKTI | GATC | 5 cut(s) | 94, 192, 229, 263, 739 |
| BstMAI | GTCTC | 1 cut(s) | 78 |
| BstMBI | GATC | 5 cut(s) | 91, 189, 226, 260, 736 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 157, 388 |
| BstNI | CCWGG | 3 cut(s) | 21, 384, 603 |
| BstNSI | RCATGY | 2 cut(s) | 635, 835 |
| BstSCI | CCNGG | 4 cut(s) | 19, 46, 382, 601 |
| BsuI | GTATCC | 1 cut(s) | 48 |
| BsuRI | GGCC | 2 cut(s) | 382, 477 |
| BtsCI | GGATG | 3 cut(s) | 311, 354, 730 |
| BtsI | GCAGTG | 1 cut(s) | 696 |
| BtsIMutI | CAGTG | 1 cut(s) | 696 |
| BveI | ACCTGC | 1 cut(s) | 142 |
| Cac8I | GCNNGC | 2 cut(s) | 120, 676 |
| CciI | TCATGA | 2 cut(s) | 184, 229 |
| Cfr13I | GGNCC | 2 cut(s) | 140, 488 |
| CseI | GACGC | 1 cut(s) | 40 |
| Csp6I | GTAC | 2 cut(s) | 783, 849 |
| CviAII | CATG | 5 cut(s) | 185, 230, 523, 632, 832 |
| CviQI | GTAC | 2 cut(s) | 783, 849 |
| DdeI | CTNAG | 3 cut(s) | 179, 758, 821 |
| DpnI | GATC | 5 cut(s) | 93, 191, 228, 262, 738 |
| DpnII | GATC | 5 cut(s) | 91, 189, 226, 260, 736 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 180 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 180 |
| Eam1104I | CTCTTC | 2 cut(s) | 576, 789 |
| EarI | CTCTTC | 2 cut(s) | 576, 789 |
| Eco24I | GRGCYC | 2 cut(s) | 803, 815 |
| Eco31I | GGTCTC | 1 cut(s) | 78 |
| Eco47I | GGWCC | 2 cut(s) | 140, 488 |
| Eco57I | CTGAAG | 1 cut(s) | 678 |
| Eco72I | CACGTG | 1 cut(s) | 494 |
| EcoRI | GAATTC | 2 cut(s) | 12, 396 |
| EcoRII | CCWGG | 3 cut(s) | 19, 382, 601 |
| EcoT38I | GRGCYC | 2 cut(s) | 803, 815 |
| FaeI | CATG | 5 cut(s) | 188, 233, 526, 635, 835 |
| FaqI | GGGAC | 3 cut(s) | 38, 153, 501 |
| FatI | CATG | 5 cut(s) | 184, 229, 522, 631, 831 |
| FblI | GTMKAC | 1 cut(s) | 286 |
| Fnu4HI | GCNGC | 1 cut(s) | 161 |
| FokI | GGATG | 3 cut(s) | 318, 361, 737 |
| FriOI | GRGCYC | 2 cut(s) | 803, 815 |
| Fsp4HI | GCNGC | 1 cut(s) | 161 |
| FspBI | CTAG | 2 cut(s) | 119, 701 |
| GluI | GCNGC | 1 cut(s) | 161 |
| GsuI | CTGGAG | 1 cut(s) | 108 |
| HaeIII | GGCC | 2 cut(s) | 382, 477 |
| HapII | CCGG | 2 cut(s) | 48, 443 |
| HgaI | GACGC | 1 cut(s) | 40 |
| Hin1I | GRCGYC | 1 cut(s) | 51 |
| Hin1II | CATG | 5 cut(s) | 188, 233, 526, 635, 835 |
| HincII | GTYRAC | 1 cut(s) | 272 |
| HindII | GTYRAC | 1 cut(s) | 272 |
| HinfI | GANTC | 2 cut(s) | 569, 728 |
| HpaII | CCGG | 2 cut(s) | 48, 443 |
| HphI | GGTGA | 1 cut(s) | 828 |
| Hpy166II | GTNNAC | 3 cut(s) | 272, 287, 448 |
| Hpy188I | TCNGA | 2 cut(s) | 194, 548 |
| Hpy188III | TCNNGA | 6 cut(s) | 87, 95, 185, 230, 312, 656 |
| Hpy8I | GTNNAC | 3 cut(s) | 272, 287, 448 |
| HpyAV | CCTTC | 5 cut(s) | 93, 189, 378, 559, 719 |
| HpyCH4IV | ACGT | 2 cut(s) | 493, 862 |
| HpyCH4V | TGCA | 7 cut(s) | 59, 151, 224, 319, 391, 631, 689 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 157, 388 |
| HpyF3I | CTNAG | 3 cut(s) | 179, 758, 821 |
| HpySE526I | ACGT | 2 cut(s) | 493, 862 |
| Hsp92I | GRCGYC | 1 cut(s) | 51 |
| Hsp92II | CATG | 5 cut(s) | 188, 233, 526, 635, 835 |
| Kzo9I | GATC | 5 cut(s) | 91, 189, 226, 260, 736 |
| LweI | GCATC | 1 cut(s) | 68 |
| MaeI | CTAG | 2 cut(s) | 119, 701 |
| MaeII | ACGT | 2 cut(s) | 493, 862 |
| MaeIII | GTNAC | 2 cut(s) | 26, 834 |
| MalI | GATC | 5 cut(s) | 93, 191, 228, 262, 738 |
| MboI | GATC | 5 cut(s) | 91, 189, 226, 260, 736 |
| MboII | GAAGA | 3 cut(s) | 593, 671, 806 |
| MhlI | GDGCHC | 2 cut(s) | 803, 815 |
| MluCI | AATT | 7 cut(s) | 12, 396, 466, 480, 587, 650, 764 |
| MlyI | GAGTC | 1 cut(s) | 737 |
| MmeI | TCCRAC | 2 cut(s) | 367, 425 |
| MnlI | CCTC | 8 cut(s) | 27, 54, 295, 319, 542, 637, 753, 783 |
| MroXI | GAANNNNTTC | 1 cut(s) | 556 |
| MseI | TTAA | 4 cut(s) | 590, 618, 777, 843 |
| MslI | CAYNNNNRTG | 2 cut(s) | 279, 618 |
| MspA1I | CMGCKG | 1 cut(s) | 757 |
| MspI | CCGG | 2 cut(s) | 48, 443 |
| MspR9I | CCNGG | 4 cut(s) | 21, 48, 384, 603 |
| Mva1269I | GAATGC | 1 cut(s) | 321 |
| MvaI | CCWGG | 3 cut(s) | 21, 384, 603 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 157, 388 |
| NciI | CCSGG | 1 cut(s) | 48 |
| NdeII | GATC | 5 cut(s) | 91, 189, 226, 260, 736 |
| NheI | GCTAGC | 1 cut(s) | 118 |
| NlaIII | CATG | 5 cut(s) | 188, 233, 526, 635, 835 |
| NlaIV | GGNNCC | 3 cut(s) | 141, 354, 489 |
| NmuCI | GTSAC | 1 cut(s) | 834 |
| NspI | RCATGY | 2 cut(s) | 635, 835 |
| PagI | TCATGA | 2 cut(s) | 184, 229 |
| PctI | GAATGC | 1 cut(s) | 321 |
| PdmI | GAANNNNTTC | 1 cut(s) | 556 |
| PfeI | GAWTC | 1 cut(s) | 569 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 349 |
| PkrI | GCNGC | 1 cut(s) | 162 |
| PleI | GAGTC | 1 cut(s) | 736 |
| PmaCI | CACGTG | 1 cut(s) | 494 |
| PmlI | CACGTG | 1 cut(s) | 494 |
| PpsI | GAGTC | 1 cut(s) | 736 |
| Ppu21I | YACGTR | 1 cut(s) | 494 |
| PsiI | TTATAA | 1 cut(s) | 416 |
| Psp6I | CCWGG | 3 cut(s) | 19, 382, 601 |
| PspCI | CACGTG | 1 cut(s) | 494 |
| PspGI | CCWGG | 3 cut(s) | 19, 382, 601 |
| PspN4I | GGNNCC | 3 cut(s) | 141, 354, 489 |
| PspPI | GGNCC | 2 cut(s) | 140, 488 |
| PvuII | CAGCTG | 1 cut(s) | 757 |
| RsaI | GTAC | 2 cut(s) | 784, 850 |
| RsaNI | GTAC | 2 cut(s) | 783, 849 |
| RseI | CAYNNNNRTG | 2 cut(s) | 279, 618 |
| SaqAI | TTAA | 4 cut(s) | 590, 618, 777, 843 |
| SatI | GCNGC | 1 cut(s) | 161 |
| Sau3AI | GATC | 5 cut(s) | 91, 189, 226, 260, 736 |
| Sau96I | GGNCC | 2 cut(s) | 140, 488 |
| SchI | GAGTC | 1 cut(s) | 737 |
| ScrFI | CCNGG | 4 cut(s) | 21, 48, 384, 603 |
| SduI | GDGCHC | 2 cut(s) | 803, 815 |
| SetI | ASST | 8 cut(s) | 74, 156, 271, 496, 711, 759, 772, 865 |
| SfaNI | GCATC | 1 cut(s) | 68 |
| SinI | GGWCC | 2 cut(s) | 140, 488 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 279, 618 |
| SmlI | CTYRAG | 2 cut(s) | 239, 713 |
| SmoI | CTYRAG | 2 cut(s) | 239, 713 |
| Sse9I | AATT | 7 cut(s) | 12, 396, 466, 480, 587, 650, 764 |
| SsiI | CCGC | 2 cut(s) | 77, 161 |
| SspMI | CTAG | 2 cut(s) | 119, 701 |
| StyD4I | CCNGG | 4 cut(s) | 19, 46, 382, 601 |
| TaiI | ACGT | 2 cut(s) | 496, 865 |
| TaqI | TCGA | 3 cut(s) | 94, 371, 735 |
| TasI | AATT | 7 cut(s) | 12, 396, 466, 480, 587, 650, 764 |
| TatI | WGTACW | 1 cut(s) | 848 |
| TauI | GCSGC | 1 cut(s) | 163 |
| TfiI | GAWTC | 1 cut(s) | 569 |
| Tru1I | TTAA | 4 cut(s) | 590, 618, 777, 843 |
| Tru9I | TTAA | 4 cut(s) | 590, 618, 777, 843 |
| TscAI | CASTG | 1 cut(s) | 696 |
| TseFI | GTSAC | 1 cut(s) | 834 |
| Tsp45I | GTSAC | 1 cut(s) | 834 |
| TspDTI | ATGAA | 3 cut(s) | 246, 624, 872 |
| TspGWI | ACGGA | 2 cut(s) | 345, 361 |
| TspRI | CASTG | 1 cut(s) | 696 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 349 |
| VpaK11BI | GGWCC | 2 cut(s) | 140, 488 |
| XapI | RAATTY | 4 cut(s) | 12, 396, 480, 650 |
| XceI | RCATGY | 2 cut(s) | 635, 835 |
| XmiI | GTMKAC | 1 cut(s) | 286 |
| XmnI | GAANNNNTTC | 1 cut(s) | 556 |
| XspI | CTAG | 2 cut(s) | 119, 701 |