protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 179 - 228 | 9.3e-10 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 430 |
| AccB1I | GGYRCC | 1 cut(s) | 430 |
| AcsI | RAATTY | 1 cut(s) | 240 |
| AfaI | GTAC | 2 cut(s) | 432, 559 |
| AgsI | TTSAA | 4 cut(s) | 113, 371, 404, 514 |
| AjnI | CCWGG | 1 cut(s) | 613 |
| AluBI | AGCT | 2 cut(s) | 107, 602 |
| AluI | AGCT | 2 cut(s) | 107, 602 |
| Alw21I | GWGCWC | 1 cut(s) | 574 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 614 |
| ApeKI | GCWGC | 1 cut(s) | 104 |
| ApoI | RAATTY | 1 cut(s) | 240 |
| Asp718I | GGTACC | 1 cut(s) | 430 |
| AsuHPI | GGTGA | 2 cut(s) | 484, 574 |
| BanI | GGYRCC | 1 cut(s) | 430 |
| Bbv12I | GWGCWC | 1 cut(s) | 574 |
| BbvI | GCAGC | 1 cut(s) | 116 |
| BccI | CCATC | 4 cut(s) | 37, 227, 421, 593 |
| BceAI | ACGGC | 2 cut(s) | 371, 561 |
| BciT130I | CCWGG | 1 cut(s) | 615 |
| BfmI | CTRYAG | 1 cut(s) | 597 |
| BisI | GCNGC | 1 cut(s) | 105 |
| BlsI | GCNGC | 1 cut(s) | 106 |
| Bme1390I | CCNGG | 1 cut(s) | 615 |
| BmiI | GGNNCC | 1 cut(s) | 432 |
| BmrFI | CCNGG | 1 cut(s) | 615 |
| BpmI | CTGGAG | 1 cut(s) | 330 |
| BseBI | CCWGG | 1 cut(s) | 615 |
| BseGI | GGATG | 2 cut(s) | 48, 432 |
| BseXI | GCAGC | 1 cut(s) | 116 |
| BshNI | GGYRCC | 1 cut(s) | 430 |
| BsiHKAI | GWGCWC | 1 cut(s) | 574 |
| BslFI | GGGAC | 1 cut(s) | 556 |
| BsmFI | GGGAC | 1 cut(s) | 556 |
| BsmI | GAATGC | 1 cut(s) | 639 |
| Bsp1286I | GDGCHC | 1 cut(s) | 574 |
| Bsp1407I | TGTACA | 1 cut(s) | 557 |
| BspLI | GGNNCC | 1 cut(s) | 432 |
| BspQI | GCTCTTC | 1 cut(s) | 308 |
| BspT107I | GGYRCC | 1 cut(s) | 430 |
| BsrGI | TGTACA | 1 cut(s) | 557 |
| Bst2UI | CCWGG | 1 cut(s) | 615 |
| Bst4CI | ACNGT | 4 cut(s) | 260, 562, 610, 629 |
| Bst6I | CTCTTC | 2 cut(s) | 308, 653 |
| BstAUI | TGTACA | 1 cut(s) | 557 |
| BstC8I | GCNNGC | 1 cut(s) | 320 |
| BstF5I | GGATG | 2 cut(s) | 48, 432 |
| BstNI | CCWGG | 1 cut(s) | 615 |
| BstNSI | RCATGY | 3 cut(s) | 125, 322, 336 |
| BstSCI | CCNGG | 1 cut(s) | 613 |
| BstSFI | CTRYAG | 1 cut(s) | 597 |
| BstV1I | GCAGC | 1 cut(s) | 116 |
| BtsCI | GGATG | 2 cut(s) | 48, 432 |
| BtsIMutI | CAGTG | 1 cut(s) | 634 |
| Cac8I | GCNNGC | 1 cut(s) | 320 |
| CaiI | CAGNNNCTG | 1 cut(s) | 614 |
| Csp6I | GTAC | 2 cut(s) | 431, 558 |
| CviAII | CATG | 9 cut(s) | 77, 122, 310, 319, 333, 446, 482, 589, 670 |
| CviJI | RGCY | 4 cut(s) | 107, 201, 358, 602 |
| CviKI_1 | RGCY | 4 cut(s) | 107, 201, 358, 602 |
| CviQI | GTAC | 2 cut(s) | 431, 558 |
| Eam1104I | CTCTTC | 2 cut(s) | 308, 653 |
| EarI | CTCTTC | 2 cut(s) | 308, 653 |
| Eco32I | GATATC | 1 cut(s) | 62 |
| EcoRII | CCWGG | 1 cut(s) | 613 |
| EcoRV | GATATC | 1 cut(s) | 62 |
| FaeI | CATG | 9 cut(s) | 80, 125, 313, 322, 336, 449, 485, 592, 673 |
| FaqI | GGGAC | 1 cut(s) | 556 |
| FatI | CATG | 9 cut(s) | 76, 121, 309, 318, 332, 445, 481, 588, 669 |
| Fnu4HI | GCNGC | 1 cut(s) | 105 |
| FokI | GGATG | 2 cut(s) | 55, 439 |
| Fsp4HI | GCNGC | 1 cut(s) | 105 |
| GluI | GCNGC | 1 cut(s) | 105 |
| GsuI | CTGGAG | 1 cut(s) | 330 |
| Hin1II | CATG | 9 cut(s) | 80, 125, 313, 322, 336, 449, 485, 592, 673 |
| HinfI | GANTC | 2 cut(s) | 305, 350 |
| HphI | GGTGA | 2 cut(s) | 484, 574 |
| Hpy188I | TCNGA | 2 cut(s) | 42, 439 |
| Hpy188III | TCNNGA | 2 cut(s) | 263, 347 |
| HpyAV | CCTTC | 2 cut(s) | 444, 511 |
| HpyCH4III | ACNGT | 4 cut(s) | 260, 562, 610, 629 |
| HpyCH4V | TGCA | 5 cut(s) | 296, 332, 377, 385, 391 |
| Hsp92II | CATG | 9 cut(s) | 80, 125, 313, 322, 336, 449, 485, 592, 673 |
| KpnI | GGTACC | 1 cut(s) | 434 |
| LguI | GCTCTTC | 1 cut(s) | 308 |
| LpnPI | CCDG | 6 cut(s) | 248, 282, 360, 600, 621, 627 |
| Lsp1109I | GCAGC | 1 cut(s) | 116 |
| MaeIII | GTNAC | 2 cut(s) | 580, 629 |
| MboII | GAAGA | 3 cut(s) | 325, 526, 640 |
| MhlI | GDGCHC | 1 cut(s) | 574 |
| MluCI | AATT | 1 cut(s) | 240 |
| MlyI | GAGTC | 1 cut(s) | 314 |
| MseI | TTAA | 4 cut(s) | 9, 87, 411, 685 |
| MslI | CAYNNNNRTG | 1 cut(s) | 587 |
| MspR9I | CCNGG | 1 cut(s) | 615 |
| Mva1269I | GAATGC | 1 cut(s) | 639 |
| MvaI | CCWGG | 1 cut(s) | 615 |
| NlaIII | CATG | 9 cut(s) | 80, 125, 313, 322, 336, 449, 485, 592, 673 |
| NlaIV | GGNNCC | 1 cut(s) | 432 |
| NmuCI | GTSAC | 2 cut(s) | 580, 629 |
| NspI | RCATGY | 3 cut(s) | 125, 322, 336 |
| PaeI | GCATGC | 1 cut(s) | 322 |
| PciSI | GCTCTTC | 1 cut(s) | 308 |
| PctI | GAATGC | 1 cut(s) | 639 |
| PfeI | GAWTC | 1 cut(s) | 350 |
| PkrI | GCNGC | 1 cut(s) | 106 |
| PleI | GAGTC | 1 cut(s) | 313 |
| PpsI | GAGTC | 1 cut(s) | 313 |
| Psp6I | CCWGG | 1 cut(s) | 613 |
| PspGI | CCWGG | 1 cut(s) | 613 |
| PspN4I | GGNNCC | 1 cut(s) | 432 |
| PstNI | CAGNNNCTG | 1 cut(s) | 614 |
| RsaI | GTAC | 2 cut(s) | 432, 559 |
| RsaNI | GTAC | 2 cut(s) | 431, 558 |
| RseI | CAYNNNNRTG | 1 cut(s) | 587 |
| SapI | GCTCTTC | 1 cut(s) | 308 |
| SaqAI | TTAA | 4 cut(s) | 9, 87, 411, 685 |
| SatI | GCNGC | 1 cut(s) | 105 |
| SchI | GAGTC | 1 cut(s) | 314 |
| ScrFI | CCNGG | 1 cut(s) | 615 |
| SduI | GDGCHC | 1 cut(s) | 574 |
| SetI | ASST | 4 cut(s) | 109, 376, 436, 604 |
| SfcI | CTRYAG | 1 cut(s) | 597 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 587 |
| SphI | GCATGC | 1 cut(s) | 322 |
| Sse9I | AATT | 1 cut(s) | 240 |
| StyD4I | CCNGG | 1 cut(s) | 613 |
| TaaI | ACNGT | 4 cut(s) | 260, 562, 610, 629 |
| TaqI | TCGA | 1 cut(s) | 222 |
| TasI | AATT | 1 cut(s) | 240 |
| TatI | WGTACW | 1 cut(s) | 557 |
| TfiI | GAWTC | 1 cut(s) | 350 |
| Tru1I | TTAA | 4 cut(s) | 9, 87, 411, 685 |
| Tru9I | TTAA | 4 cut(s) | 9, 87, 411, 685 |
| TscAI | CASTG | 1 cut(s) | 634 |
| TseFI | GTSAC | 2 cut(s) | 580, 629 |
| TseI | GCWGC | 1 cut(s) | 104 |
| Tsp45I | GTSAC | 2 cut(s) | 580, 629 |
| TspDTI | ATGAA | 7 cut(s) | 17, 204, 326, 498, 551, 640, 658 |
| TspGWI | ACGGA | 1 cut(s) | 317 |
| TspRI | CASTG | 1 cut(s) | 634 |
| XapI | RAATTY | 1 cut(s) | 240 |
| XceI | RCATGY | 3 cut(s) | 125, 322, 336 |