protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ank_2 | PF12796 | 69 - 145 | 2.9e-07 | Ankyrin repeats (3 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 411 |
| AccB1I | GGYRCC | 1 cut(s) | 411 |
| AciI | CCGC | 3 cut(s) | 46, 49, 355 |
| AdeI | CACNNNGTG | 1 cut(s) | 557 |
| AfaI | GTAC | 1 cut(s) | 413 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 49, 298 |
| AgsI | TTSAA | 1 cut(s) | 150 |
| AluBI | AGCT | 6 cut(s) | 13, 62, 161, 208, 407, 481 |
| AluI | AGCT | 6 cut(s) | 13, 62, 161, 208, 407, 481 |
| Alw21I | GWGCWC | 1 cut(s) | 15 |
| Alw26I | GTCTC | 1 cut(s) | 279 |
| AoxI | GGCC | 1 cut(s) | 352 |
| ApeKI | GCWGC | 4 cut(s) | 5, 71, 278, 380 |
| AseI | ATTAAT | 1 cut(s) | 179 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 145 |
| Asp718I | GGTACC | 1 cut(s) | 411 |
| AspLEI | GCGC | 1 cut(s) | 467 |
| AspS9I | GGNCC | 1 cut(s) | 352 |
| AsuHPI | GGTGA | 2 cut(s) | 98, 223 |
| BaeGI | GKGCMC | 1 cut(s) | 189 |
| BanI | GGYRCC | 1 cut(s) | 411 |
| BanII | GRGCYC | 1 cut(s) | 15 |
| BauI | CACGAG | 1 cut(s) | 188 |
| Bbv12I | GWGCWC | 1 cut(s) | 15 |
| BbvI | GCAGC | 4 cut(s) | 17, 58, 265, 367 |
| BccI | CCATC | 2 cut(s) | 292, 390 |
| BceAI | ACGGC | 3 cut(s) | 279, 329, 487 |
| BcoDI | GTCTC | 1 cut(s) | 279 |
| BfaI | CTAG | 3 cut(s) | 249, 282, 449 |
| BfoI | RGCGCY | 1 cut(s) | 468 |
| BglII | AGATCT | 1 cut(s) | 445 |
| BisI | GCNGC | 6 cut(s) | 6, 47, 72, 279, 355, 381 |
| BlsI | GCNGC | 6 cut(s) | 7, 48, 73, 280, 356, 382 |
| BmgT120I | GGNCC | 1 cut(s) | 352 |
| BmiI | GGNNCC | 1 cut(s) | 413 |
| BmsI | GCATC | 2 cut(s) | 118, 231 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 276, 308 |
| BpuEI | CTTGAG | 1 cut(s) | 278 |
| Bsa29I | ATCGAT | 1 cut(s) | 394 |
| BsaBI | GATNNNNATC | 1 cut(s) | 374 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 404, 434 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 49, 298 |
| Bse3DI | GCAATG | 1 cut(s) | 437 |
| Bse8I | GATNNNNATC | 1 cut(s) | 374 |
| BseCI | ATCGAT | 1 cut(s) | 394 |
| BseGI | GGATG | 2 cut(s) | 15, 39 |
| BseJI | GATNNNNATC | 1 cut(s) | 374 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 49, 298 |
| BseMI | GCAATG | 1 cut(s) | 437 |
| BseMII | CTCAG | 1 cut(s) | 491 |
| BseSI | GKGCMC | 1 cut(s) | 189 |
| BseXI | GCAGC | 4 cut(s) | 17, 58, 265, 367 |
| BsgI | GTGCAG | 1 cut(s) | 534 |
| BshFI | GGCC | 1 cut(s) | 354 |
| BshNI | GGYRCC | 1 cut(s) | 411 |
| BshVI | ATCGAT | 1 cut(s) | 394 |
| BsiHKAI | GWGCWC | 1 cut(s) | 15 |
| BslFI | GGGAC | 2 cut(s) | 65, 169 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 49, 298 |
| BsmAI | GTCTC | 1 cut(s) | 279 |
| BsmFI | GGGAC | 2 cut(s) | 65, 169 |
| BsnI | GGCC | 1 cut(s) | 354 |
| Bsp1286I | GDGCHC | 2 cut(s) | 15, 189 |
| Bsp143I | GATC | 2 cut(s) | 391, 445 |
| BspACI | CCGC | 3 cut(s) | 46, 49, 355 |
| BspANI | GGCC | 1 cut(s) | 354 |
| BspCNI | CTCAG | 1 cut(s) | 490 |
| BspDI | ATCGAT | 1 cut(s) | 394 |
| BspLI | GGNNCC | 1 cut(s) | 413 |
| BspQI | GCTCTTC | 2 cut(s) | 168, 198 |
| BspT107I | GGYRCC | 1 cut(s) | 411 |
| BsrDI | GCAATG | 1 cut(s) | 437 |
| BssMI | GATC | 2 cut(s) | 391, 445 |
| BssSI | CACGAG | 1 cut(s) | 188 |
| Bst2BI | CACGAG | 1 cut(s) | 188 |
| Bst4CI | ACNGT | 1 cut(s) | 257 |
| Bst6I | CTCTTC | 2 cut(s) | 168, 198 |
| BstDEI | CTNAG | 1 cut(s) | 477 |
| BstF5I | GGATG | 2 cut(s) | 15, 39 |
| BstH2I | RGCGCY | 1 cut(s) | 468 |
| BstHHI | GCGC | 1 cut(s) | 467 |
| BstKTI | GATC | 2 cut(s) | 394, 448 |
| BstMAI | GTCTC | 1 cut(s) | 279 |
| BstMBI | GATC | 2 cut(s) | 391, 445 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 68, 278, 471 |
| BstNSI | RCATGY | 1 cut(s) | 309 |
| BstSLI | GKGCMC | 1 cut(s) | 189 |
| BstV1I | GCAGC | 4 cut(s) | 17, 58, 265, 367 |
| BstX2I | RGATCY | 1 cut(s) | 445 |
| BstYI | RGATCY | 1 cut(s) | 445 |
| Bsu15I | ATCGAT | 1 cut(s) | 394 |
| BsuRI | GGCC | 1 cut(s) | 354 |
| BsuTUI | ATCGAT | 1 cut(s) | 394 |
| BtgZI | GCGATG | 1 cut(s) | 361 |
| BtsCI | GGATG | 2 cut(s) | 15, 39 |
| CfoI | GCGC | 1 cut(s) | 467 |
| Cfr13I | GGNCC | 1 cut(s) | 352 |
| ClaI | ATCGAT | 1 cut(s) | 394 |
| Csp6I | GTAC | 1 cut(s) | 412 |
| CviAII | CATG | 2 cut(s) | 306, 310 |
| CviJI | RGCY | 9 cut(s) | 13, 62, 161, 208, 266, 354, 407, 474, 481 |
| CviKI_1 | RGCY | 9 cut(s) | 13, 62, 161, 208, 266, 354, 407, 474, 481 |
| CviQI | GTAC | 1 cut(s) | 412 |
| DdeI | CTNAG | 1 cut(s) | 477 |
| DpnI | GATC | 2 cut(s) | 393, 447 |
| DpnII | GATC | 2 cut(s) | 391, 445 |
| DraI | TTTAAA | 1 cut(s) | 460 |
| DraIII | CACNNNGTG | 1 cut(s) | 557 |
| Eam1104I | CTCTTC | 2 cut(s) | 168, 198 |
| EarI | CTCTTC | 2 cut(s) | 168, 198 |
| Ecl136II | GAGCTC | 1 cut(s) | 13 |
| Eco24I | GRGCYC | 1 cut(s) | 15 |
| Eco53kI | GAGCTC | 1 cut(s) | 13 |
| EcoICRI | GAGCTC | 1 cut(s) | 13 |
| EcoT22I | ATGCAT | 1 cut(s) | 311 |
| EcoT38I | GRGCYC | 1 cut(s) | 15 |
| FaeI | CATG | 2 cut(s) | 309, 313 |
| FaqI | GGGAC | 2 cut(s) | 65, 169 |
| FatI | CATG | 2 cut(s) | 305, 309 |
| FauI | CCCGC | 1 cut(s) | 42 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 47, 72, 279, 355, 381 |
| FokI | GGATG | 2 cut(s) | 2, 26 |
| FriOI | GRGCYC | 1 cut(s) | 15 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 47, 72, 279, 355, 381 |
| FspBI | CTAG | 3 cut(s) | 249, 282, 449 |
| GlaI | GCGC | 1 cut(s) | 466 |
| GluI | GCNGC | 6 cut(s) | 6, 47, 72, 279, 355, 381 |
| HaeII | RGCGCY | 1 cut(s) | 468 |
| HaeIII | GGCC | 1 cut(s) | 354 |
| HhaI | GCGC | 1 cut(s) | 467 |
| Hin1II | CATG | 2 cut(s) | 309, 313 |
| Hin6I | GCGC | 1 cut(s) | 465 |
| HinP1I | GCGC | 1 cut(s) | 465 |
| HindIII | AAGCTT | 1 cut(s) | 60 |
| HinfI | GANTC | 4 cut(s) | 146, 364, 370, 537 |
| HphI | GGTGA | 2 cut(s) | 98, 223 |
| Hpy188I | TCNGA | 2 cut(s) | 20, 369 |
| Hpy188III | TCNNGA | 2 cut(s) | 113, 295 |
| Hpy99I | CGWCG | 1 cut(s) | 257 |
| HpyCH4III | ACNGT | 1 cut(s) | 257 |
| HpyCH4V | TGCA | 5 cut(s) | 131, 244, 309, 442, 551 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 68, 278, 471 |
| HpyF3I | CTNAG | 1 cut(s) | 477 |
| Hsp92II | CATG | 2 cut(s) | 309, 313 |
| HspAI | GCGC | 1 cut(s) | 465 |
| KpnI | GGTACC | 1 cut(s) | 415 |
| Kzo9I | GATC | 2 cut(s) | 391, 445 |
| LguI | GCTCTTC | 2 cut(s) | 168, 198 |
| LpnPI | CCDG | 5 cut(s) | 45, 56, 120, 194, 441 |
| Lsp1109I | GCAGC | 4 cut(s) | 17, 58, 265, 367 |
| LweI | GCATC | 2 cut(s) | 118, 231 |
| MaeI | CTAG | 3 cut(s) | 249, 282, 449 |
| MaeIII | GTNAC | 2 cut(s) | 301, 313 |
| MalI | GATC | 2 cut(s) | 393, 447 |
| MboI | GATC | 2 cut(s) | 391, 445 |
| MboII | GAAGA | 4 cut(s) | 58, 155, 215, 331 |
| MflI | RGATCY | 1 cut(s) | 445 |
| MhlI | GDGCHC | 2 cut(s) | 15, 189 |
| MluCI | AATT | 4 cut(s) | 195, 233, 509, 541 |
| MlyI | GAGTC | 1 cut(s) | 358 |
| MmeI | TCCRAC | 1 cut(s) | 239 |
| MnlI | CCTC | 4 cut(s) | 75, 302, 343, 425 |
| Mph1103I | ATGCAT | 1 cut(s) | 311 |
| MroXI | GAANNNNTTC | 1 cut(s) | 145 |
| MseI | TTAA | 3 cut(s) | 179, 459, 531 |
| MslI | CAYNNNNRTG | 1 cut(s) | 126 |
| MspA1I | CMGCKG | 1 cut(s) | 46 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 68, 278, 471 |
| NdeII | GATC | 2 cut(s) | 391, 445 |
| NlaIII | CATG | 2 cut(s) | 309, 313 |
| NlaIV | GGNNCC | 1 cut(s) | 413 |
| NsiI | ATGCAT | 1 cut(s) | 311 |
| NspI | RCATGY | 1 cut(s) | 309 |
| PciSI | GCTCTTC | 2 cut(s) | 168, 198 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 323 |
| PdmI | GAANNNNTTC | 1 cut(s) | 145 |
| PfeI | GAWTC | 3 cut(s) | 146, 370, 537 |
| PkrI | GCNGC | 6 cut(s) | 7, 48, 73, 280, 356, 382 |
| PleI | GAGTC | 1 cut(s) | 358 |
| PpsI | GAGTC | 1 cut(s) | 358 |
| PshBI | ATTAAT | 1 cut(s) | 179 |
| Psp124BI | GAGCTC | 1 cut(s) | 15 |
| PspN4I | GGNNCC | 1 cut(s) | 413 |
| PspPI | GGNCC | 1 cut(s) | 352 |
| PsuI | RGATCY | 1 cut(s) | 445 |
| RsaI | GTAC | 1 cut(s) | 413 |
| RsaNI | GTAC | 1 cut(s) | 412 |
| RseI | CAYNNNNRTG | 1 cut(s) | 126 |
| SacI | GAGCTC | 1 cut(s) | 15 |
| SapI | GCTCTTC | 2 cut(s) | 168, 198 |
| SaqAI | TTAA | 3 cut(s) | 179, 459, 531 |
| SatI | GCNGC | 6 cut(s) | 6, 47, 72, 279, 355, 381 |
| Sau3AI | GATC | 2 cut(s) | 391, 445 |
| Sau96I | GGNCC | 1 cut(s) | 352 |
| SchI | GAGTC | 1 cut(s) | 358 |
| SduI | GDGCHC | 2 cut(s) | 15, 189 |
| SetI | ASST | 9 cut(s) | 15, 64, 163, 210, 294, 409, 417, 483, 522 |
| SfaNI | GCATC | 2 cut(s) | 118, 231 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 126 |
| SmlI | CTYRAG | 1 cut(s) | 293 |
| SmoI | CTYRAG | 1 cut(s) | 293 |
| Sse9I | AATT | 4 cut(s) | 195, 233, 509, 541 |
| SsiI | CCGC | 3 cut(s) | 46, 49, 355 |
| SspMI | CTAG | 3 cut(s) | 249, 282, 449 |
| SstI | GAGCTC | 1 cut(s) | 15 |
| TaaI | ACNGT | 1 cut(s) | 257 |
| TaqI | TCGA | 1 cut(s) | 394 |
| TasI | AATT | 4 cut(s) | 195, 233, 509, 541 |
| TauI | GCSGC | 2 cut(s) | 49, 357 |
| TfiI | GAWTC | 3 cut(s) | 146, 370, 537 |
| Tru1I | TTAA | 3 cut(s) | 179, 459, 531 |
| Tru9I | TTAA | 3 cut(s) | 179, 459, 531 |
| TseI | GCWGC | 4 cut(s) | 5, 71, 278, 380 |
| TspDTI | ATGAA | 1 cut(s) | 111 |
| TspGWI | ACGGA | 1 cut(s) | 239 |
| VspI | ATTAAT | 1 cut(s) | 179 |
| XceI | RCATGY | 1 cut(s) | 309 |
| XmnI | GAANNNNTTC | 1 cut(s) | 145 |
| XspI | CTAG | 3 cut(s) | 249, 282, 449 |
| Zsp2I | ATGCAT | 1 cut(s) | 311 |