protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 315 |
| AccBSI | CCGCTC | 1 cut(s) | 85 |
| AciI | CCGC | 2 cut(s) | 85, 288 |
| AcsI | RAATTY | 3 cut(s) | 39, 264, 1138 |
| AcuI | CTGAAG | 1 cut(s) | 903 |
| AfaI | GTAC | 2 cut(s) | 243, 673 |
| AgsI | TTSAA | 6 cut(s) | 248, 488, 529, 607, 834, 998 |
| AjnI | CCWGG | 1 cut(s) | 727 |
| AluBI | AGCT | 1 cut(s) | 1090 |
| AluI | AGCT | 1 cut(s) | 1090 |
| Alw21I | GWGCWC | 1 cut(s) | 688 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 665, 728 |
| AoxI | GGCC | 4 cut(s) | 355, 376, 925, 979 |
| ApeKI | GCWGC | 1 cut(s) | 713 |
| ApoI | RAATTY | 3 cut(s) | 39, 264, 1138 |
| AspS9I | GGNCC | 1 cut(s) | 88 |
| AsuHPI | GGTGA | 3 cut(s) | 688, 743, 925 |
| AvaII | GGWCC | 1 cut(s) | 88 |
| AxyI | CCTNAGG | 1 cut(s) | 14 |
| BbsI | GAAGAC | 1 cut(s) | 346 |
| Bbv12I | GWGCWC | 1 cut(s) | 688 |
| BbvI | GCAGC | 1 cut(s) | 725 |
| BccI | CCATC | 2 cut(s) | 347, 472 |
| BciT130I | CCWGG | 1 cut(s) | 729 |
| BclI | TGATCA | 1 cut(s) | 478 |
| BfaI | CTAG | 1 cut(s) | 20 |
| BfmI | CTRYAG | 1 cut(s) | 711 |
| BglII | AGATCT | 1 cut(s) | 760 |
| BisI | GCNGC | 2 cut(s) | 288, 714 |
| BlsI | GCNGC | 2 cut(s) | 289, 715 |
| Bme1390I | CCNGG | 1 cut(s) | 729 |
| Bme18I | GGWCC | 1 cut(s) | 88 |
| BmgT120I | GGNCC | 1 cut(s) | 88 |
| BmiI | GGNNCC | 2 cut(s) | 89, 257 |
| BmrFI | CCNGG | 1 cut(s) | 729 |
| BmsI | GCATC | 2 cut(s) | 802, 1056 |
| BpiI | GAAGAC | 1 cut(s) | 346 |
| BpuEI | CTTGAG | 1 cut(s) | 1106 |
| Bsa29I | ATCGAT | 1 cut(s) | 51 |
| BsaJI | CCNNGG | 3 cut(s) | 424, 555, 840 |
| Bse1I | ACTGG | 2 cut(s) | 1038, 1046 |
| Bse21I | CCTNAGG | 1 cut(s) | 14 |
| Bse3DI | GCAATG | 3 cut(s) | 459, 543, 1076 |
| BseBI | CCWGG | 1 cut(s) | 729 |
| BseCI | ATCGAT | 1 cut(s) | 51 |
| BseDI | CCNNGG | 3 cut(s) | 424, 555, 840 |
| BseGI | GGATG | 1 cut(s) | 1071 |
| BseMI | GCAATG | 3 cut(s) | 459, 543, 1076 |
| BseNI | ACTGG | 2 cut(s) | 1038, 1046 |
| BseXI | GCAGC | 1 cut(s) | 725 |
| Bsh1285I | CGRYCG | 1 cut(s) | 55 |
| BshFI | GGCC | 4 cut(s) | 357, 378, 927, 981 |
| BshVI | ATCGAT | 1 cut(s) | 51 |
| BsiEI | CGRYCG | 1 cut(s) | 55 |
| BsiHKAI | GWGCWC | 1 cut(s) | 688 |
| BsmI | GAATGC | 2 cut(s) | 716, 861 |
| BsnI | GGCC | 4 cut(s) | 357, 378, 927, 981 |
| Bsp1286I | GDGCHC | 1 cut(s) | 688 |
| Bsp1407I | TGTACA | 1 cut(s) | 671 |
| Bsp143I | GATC | 3 cut(s) | 52, 478, 760 |
| BspACI | CCGC | 2 cut(s) | 85, 288 |
| BspANI | GGCC | 4 cut(s) | 357, 378, 927, 981 |
| BspDI | ATCGAT | 1 cut(s) | 51 |
| BspLI | GGNNCC | 2 cut(s) | 89, 257 |
| BspMAI | CTGCAG | 1 cut(s) | 715 |
| BsrBI | CCGCTC | 1 cut(s) | 85 |
| BsrDI | GCAATG | 3 cut(s) | 459, 543, 1076 |
| BsrGI | TGTACA | 1 cut(s) | 671 |
| BsrI | ACTGG | 2 cut(s) | 1038, 1046 |
| BssECI | CCNNGG | 3 cut(s) | 424, 555, 840 |
| BssMI | GATC | 3 cut(s) | 52, 478, 760 |
| BssT1I | CCWWGG | 1 cut(s) | 555 |
| Bst2UI | CCWGG | 1 cut(s) | 729 |
| Bst4CI | ACNGT | 4 cut(s) | 96, 448, 676, 724 |
| BstAUI | TGTACA | 1 cut(s) | 671 |
| BstC8I | GCNNGC | 1 cut(s) | 1035 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 1071 |
| BstKTI | GATC | 3 cut(s) | 55, 481, 763 |
| BstMBI | GATC | 3 cut(s) | 52, 478, 760 |
| BstMCI | CGRYCG | 1 cut(s) | 55 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1087 |
| BstNI | CCWGG | 1 cut(s) | 729 |
| BstNSI | RCATGY | 2 cut(s) | 200, 774 |
| BstSCI | CCNGG | 1 cut(s) | 727 |
| BstSFI | CTRYAG | 1 cut(s) | 711 |
| BstV1I | GCAGC | 1 cut(s) | 725 |
| BstV2I | GAAGAC | 1 cut(s) | 346 |
| BstX2I | RGATCY | 1 cut(s) | 760 |
| BstYI | RGATCY | 1 cut(s) | 760 |
| Bsu15I | ATCGAT | 1 cut(s) | 51 |
| Bsu36I | CCTNAGG | 1 cut(s) | 14 |
| BsuRI | GGCC | 4 cut(s) | 357, 378, 927, 981 |
| BsuTUI | ATCGAT | 1 cut(s) | 51 |
| BtsCI | GGATG | 1 cut(s) | 1071 |
| BtsI | GCAGTG | 1 cut(s) | 126 |
| BtsIMutI | CAGTG | 2 cut(s) | 126, 1045 |
| Cac8I | GCNNGC | 1 cut(s) | 1035 |
| CaiI | CAGNNNCTG | 2 cut(s) | 665, 728 |
| Cfr13I | GGNCC | 1 cut(s) | 88 |
| ClaI | ATCGAT | 1 cut(s) | 51 |
| Csp6I | GTAC | 2 cut(s) | 242, 672 |
| CviAII | CATG | 6 cut(s) | 80, 109, 197, 771, 850, 958 |
| CviJI | RGCY | 7 cut(s) | 19, 273, 357, 378, 927, 981, 1090 |
| CviKI_1 | RGCY | 7 cut(s) | 19, 273, 357, 378, 927, 981, 1090 |
| CviQI | GTAC | 2 cut(s) | 242, 672 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| DpnI | GATC | 3 cut(s) | 54, 480, 762 |
| DpnII | GATC | 3 cut(s) | 52, 478, 760 |
| Eco130I | CCWWGG | 1 cut(s) | 555 |
| Eco47I | GGWCC | 1 cut(s) | 88 |
| Eco57I | CTGAAG | 1 cut(s) | 903 |
| Eco81I | CCTNAGG | 1 cut(s) | 14 |
| EcoRII | CCWGG | 1 cut(s) | 727 |
| EcoT14I | CCWWGG | 1 cut(s) | 555 |
| ErhI | CCWWGG | 1 cut(s) | 555 |
| FaeI | CATG | 6 cut(s) | 83, 112, 200, 774, 853, 961 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 342, 374 |
| FatI | CATG | 6 cut(s) | 79, 108, 196, 770, 849, 957 |
| FauI | CCCGC | 1 cut(s) | 78 |
| FauNDI | CATATG | 1 cut(s) | 1061 |
| FbaI | TGATCA | 1 cut(s) | 478 |
| Fnu4HI | GCNGC | 2 cut(s) | 288, 714 |
| FokI | GGATG | 1 cut(s) | 1078 |
| Fsp4HI | GCNGC | 2 cut(s) | 288, 714 |
| FspBI | CTAG | 1 cut(s) | 20 |
| GluI | GCNGC | 2 cut(s) | 288, 714 |
| HaeIII | GGCC | 4 cut(s) | 357, 378, 927, 981 |
| Hin1II | CATG | 6 cut(s) | 83, 112, 200, 774, 853, 961 |
| HinfI | GANTC | 5 cut(s) | 28, 48, 371, 566, 613 |
| HphI | GGTGA | 3 cut(s) | 688, 743, 925 |
| Hpy166II | GTNNAC | 2 cut(s) | 574, 708 |
| Hpy188I | TCNGA | 6 cut(s) | 270, 338, 370, 388, 811, 883 |
| Hpy188III | TCNNGA | 2 cut(s) | 149, 1085 |
| Hpy8I | GTNNAC | 2 cut(s) | 574, 708 |
| HpyAV | CCTTC | 3 cut(s) | 389, 646, 992 |
| HpyCH4III | ACNGT | 4 cut(s) | 96, 448, 676, 724 |
| HpyCH4IV | ACGT | 1 cut(s) | 874 |
| HpyCH4V | TGCA | 9 cut(s) | 79, 114, 494, 502, 508, 548, 713, 815, 1069 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1087 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| HpySE526I | ACGT | 1 cut(s) | 874 |
| Hsp92II | CATG | 6 cut(s) | 83, 112, 200, 774, 853, 961 |
| Ksp22I | TGATCA | 1 cut(s) | 478 |
| Kzo9I | GATC | 3 cut(s) | 52, 478, 760 |
| LpnPI | CCDG | 8 cut(s) | 77, 357, 360, 714, 741, 1051, 1059, 1097 |
| Lsp1109I | GCAGC | 1 cut(s) | 725 |
| LweI | GCATC | 2 cut(s) | 802, 1056 |
| MaeI | CTAG | 1 cut(s) | 20 |
| MaeII | ACGT | 1 cut(s) | 874 |
| MaeIII | GTNAC | 2 cut(s) | 468, 1048 |
| MalI | GATC | 3 cut(s) | 54, 480, 762 |
| MbiI | CCGCTC | 1 cut(s) | 85 |
| MboI | GATC | 3 cut(s) | 52, 478, 760 |
| MboII | GAAGA | 7 cut(s) | 143, 176, 351, 413, 755, 822, 896 |
| MfeI | CAATTG | 1 cut(s) | 1011 |
| MflI | RGATCY | 1 cut(s) | 760 |
| MhlI | GDGCHC | 1 cut(s) | 688 |
| MmeI | TCCRAC | 1 cut(s) | 115 |
| MseI | TTAA | 3 cut(s) | 360, 776, 1122 |
| MslI | CAYNNNNRTG | 6 cut(s) | 306, 387, 701, 914, 1060, 1064 |
| MspA1I | CMGCKG | 1 cut(s) | 290 |
| MspR9I | CCNGG | 1 cut(s) | 729 |
| MunI | CAATTG | 1 cut(s) | 1011 |
| Mva1269I | GAATGC | 2 cut(s) | 716, 861 |
| MvaI | CCWGG | 1 cut(s) | 729 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1087 |
| NdeI | CATATG | 1 cut(s) | 1061 |
| NdeII | GATC | 3 cut(s) | 52, 478, 760 |
| NlaIII | CATG | 6 cut(s) | 83, 112, 200, 774, 853, 961 |
| NlaIV | GGNNCC | 2 cut(s) | 89, 257 |
| NmeAIII | GCCGAG | 1 cut(s) | 405 |
| NmuCI | GTSAC | 1 cut(s) | 468 |
| NspI | RCATGY | 2 cut(s) | 200, 774 |
| PctI | GAATGC | 2 cut(s) | 716, 861 |
| PfeI | GAWTC | 5 cut(s) | 28, 48, 371, 566, 613 |
| PkrI | GCNGC | 2 cut(s) | 289, 715 |
| Ple19I | CGATCG | 1 cut(s) | 55 |
| PsiI | TTATAA | 1 cut(s) | 315 |
| Psp6I | CCWGG | 1 cut(s) | 727 |
| PspGI | CCWGG | 1 cut(s) | 727 |
| PspN4I | GGNNCC | 2 cut(s) | 89, 257 |
| PspPI | GGNCC | 1 cut(s) | 88 |
| PstI | CTGCAG | 1 cut(s) | 715 |
| PstNI | CAGNNNCTG | 2 cut(s) | 665, 728 |
| PsuI | RGATCY | 1 cut(s) | 760 |
| PvuI | CGATCG | 1 cut(s) | 55 |
| RsaI | GTAC | 2 cut(s) | 243, 673 |
| RsaNI | GTAC | 2 cut(s) | 242, 672 |
| RseI | CAYNNNNRTG | 6 cut(s) | 306, 387, 701, 914, 1060, 1064 |
| SaqAI | TTAA | 3 cut(s) | 360, 776, 1122 |
| SatI | GCNGC | 2 cut(s) | 288, 714 |
| Sau3AI | GATC | 3 cut(s) | 52, 478, 760 |
| Sau96I | GGNCC | 1 cut(s) | 88 |
| ScrFI | CCNGG | 1 cut(s) | 729 |
| SduI | GDGCHC | 1 cut(s) | 688 |
| SetI | ASST | 9 cut(s) | 106, 426, 493, 537, 685, 842, 877, 1055, 1092 |
| SfaNI | GCATC | 2 cut(s) | 802, 1056 |
| SfcI | CTRYAG | 1 cut(s) | 711 |
| SinI | GGWCC | 1 cut(s) | 88 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 306, 387, 701, 914, 1060, 1064 |
| SmlI | CTYRAG | 1 cut(s) | 1085 |
| SmoI | CTYRAG | 1 cut(s) | 1085 |
| SsiI | CCGC | 2 cut(s) | 85, 288 |
| SspI | AATATT | 1 cut(s) | 319 |
| SspMI | CTAG | 1 cut(s) | 20 |
| StyD4I | CCNGG | 1 cut(s) | 727 |
| StyI | CCWWGG | 1 cut(s) | 555 |
| TaaI | ACNGT | 4 cut(s) | 96, 448, 676, 724 |
| TaiI | ACGT | 1 cut(s) | 877 |
| TaqI | TCGA | 1 cut(s) | 51 |
| TatI | WGTACW | 1 cut(s) | 671 |
| TauI | GCSGC | 1 cut(s) | 290 |
| TfiI | GAWTC | 5 cut(s) | 28, 48, 371, 566, 613 |
| Tru1I | TTAA | 3 cut(s) | 360, 776, 1122 |
| Tru9I | TTAA | 3 cut(s) | 360, 776, 1122 |
| TscAI | CASTG | 2 cut(s) | 126, 1045 |
| TseFI | GTSAC | 1 cut(s) | 468 |
| TseI | GCWGC | 1 cut(s) | 713 |
| Tsp45I | GTSAC | 1 cut(s) | 468 |
| TspDTI | ATGAA | 7 cut(s) | 83, 152, 371, 405, 665, 765, 1048 |
| TspRI | CASTG | 2 cut(s) | 126, 1045 |
| VpaK11BI | GGWCC | 1 cut(s) | 88 |
| XapI | RAATTY | 3 cut(s) | 39, 264, 1138 |
| XceI | RCATGY | 2 cut(s) | 200, 774 |
| XspI | CTAG | 1 cut(s) | 20 |