protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 192 - 304 | 5.9e-22 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 126, 294, 302 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 46 |
| AciI | CCGC | 2 cut(s) | 267, 566 |
| AclWI | GGATC | 1 cut(s) | 20 |
| AcsI | RAATTY | 2 cut(s) | 93, 287 |
| AcuI | CTGAAG | 1 cut(s) | 825 |
| AfaI | GTAC | 3 cut(s) | 450, 589, 604 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 49 |
| AgsI | TTSAA | 4 cut(s) | 56, 419, 460, 756 |
| AjiI | CACGTC | 1 cut(s) | 792 |
| AjnI | CCWGG | 1 cut(s) | 658 |
| AluBI | AGCT | 1 cut(s) | 298 |
| AluI | AGCT | 1 cut(s) | 298 |
| Alw21I | GWGCWC | 1 cut(s) | 619 |
| AlwI | GGATC | 1 cut(s) | 20 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 659 |
| AoxI | GGCC | 3 cut(s) | 244, 847, 901 |
| ApeKI | GCWGC | 4 cut(s) | 146, 161, 641, 644 |
| ApoI | RAATTY | 2 cut(s) | 93, 287 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 93 |
| AsuHPI | GGTGA | 4 cut(s) | 272, 619, 674, 847 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 580, 612 |
| Bbv12I | GWGCWC | 1 cut(s) | 619 |
| BbvI | GCAGC | 4 cut(s) | 158, 173, 628, 656 |
| BciT130I | CCWGG | 1 cut(s) | 660 |
| BclI | TGATCA | 1 cut(s) | 313 |
| BfaI | CTAG | 2 cut(s) | 8, 1054 |
| BfmI | CTRYAG | 1 cut(s) | 642 |
| BisI | GCNGC | 6 cut(s) | 147, 162, 267, 567, 642, 645 |
| BlsI | GCNGC | 6 cut(s) | 148, 163, 268, 568, 643, 646 |
| Bme1390I | CCNGG | 1 cut(s) | 660 |
| BmgBI | CACGTC | 1 cut(s) | 792 |
| BmrFI | CCNGG | 1 cut(s) | 660 |
| BmsI | GCATC | 1 cut(s) | 978 |
| BpmI | CTGGAG | 1 cut(s) | 201 |
| Bsa29I | ATCGAT | 2 cut(s) | 408, 932 |
| BsaJI | CCNNGG | 1 cut(s) | 486 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 49 |
| Bse1I | ACTGG | 1 cut(s) | 218 |
| BseBI | CCWGG | 1 cut(s) | 660 |
| BseCI | ATCGAT | 2 cut(s) | 408, 932 |
| BseDI | CCNNGG | 1 cut(s) | 486 |
| BseGI | GGATG | 3 cut(s) | 685, 739, 993 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 49 |
| BseNI | ACTGG | 1 cut(s) | 218 |
| BseXI | GCAGC | 4 cut(s) | 158, 173, 628, 656 |
| BshFI | GGCC | 3 cut(s) | 246, 849, 903 |
| BshVI | ATCGAT | 2 cut(s) | 408, 932 |
| BsiHKAI | GWGCWC | 1 cut(s) | 619 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 49 |
| BsmI | GAATGC | 2 cut(s) | 647, 783 |
| BsnI | GGCC | 3 cut(s) | 246, 849, 903 |
| Bsp1286I | GDGCHC | 1 cut(s) | 619 |
| Bsp143I | GATC | 6 cut(s) | 12, 313, 349, 405, 409, 1050 |
| BspACI | CCGC | 2 cut(s) | 267, 566 |
| BspANI | GGCC | 3 cut(s) | 246, 849, 903 |
| BspDI | ATCGAT | 2 cut(s) | 408, 932 |
| BspMAI | CTGCAG | 1 cut(s) | 646 |
| BspPI | GGATC | 1 cut(s) | 20 |
| BsrI | ACTGG | 1 cut(s) | 218 |
| BssECI | CCNNGG | 1 cut(s) | 486 |
| BssMI | GATC | 6 cut(s) | 12, 313, 349, 405, 409, 1050 |
| BssT1I | CCWWGG | 1 cut(s) | 486 |
| Bst2UI | CCWGG | 1 cut(s) | 660 |
| Bst4CI | ACNGT | 5 cut(s) | 60, 379, 427, 607, 655 |
| BstC8I | GCNNGC | 1 cut(s) | 957 |
| BstF5I | GGATG | 3 cut(s) | 685, 739, 993 |
| BstKTI | GATC | 6 cut(s) | 15, 316, 352, 408, 412, 1053 |
| BstMBI | GATC | 6 cut(s) | 12, 313, 349, 405, 409, 1050 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 566 |
| BstNI | CCWGG | 1 cut(s) | 660 |
| BstNSI | RCATGY | 1 cut(s) | 179 |
| BstSCI | CCNGG | 1 cut(s) | 658 |
| BstSFI | CTRYAG | 1 cut(s) | 642 |
| BstV1I | GCAGC | 4 cut(s) | 158, 173, 628, 656 |
| BstX2I | RGATCY | 1 cut(s) | 1050 |
| BstYI | RGATCY | 1 cut(s) | 1050 |
| Bsu15I | ATCGAT | 2 cut(s) | 408, 932 |
| BsuRI | GGCC | 3 cut(s) | 246, 849, 903 |
| BsuTUI | ATCGAT | 2 cut(s) | 408, 932 |
| BtrI | CACGTC | 1 cut(s) | 792 |
| BtsCI | GGATG | 3 cut(s) | 685, 739, 993 |
| Cac8I | GCNNGC | 1 cut(s) | 957 |
| CaiI | CAGNNNCTG | 1 cut(s) | 659 |
| ClaI | ATCGAT | 2 cut(s) | 408, 932 |
| Csp6I | GTAC | 3 cut(s) | 449, 588, 603 |
| CviAII | CATG | 4 cut(s) | 44, 73, 176, 772 |
| CviJI | RGCY | 5 cut(s) | 246, 252, 298, 849, 903 |
| CviKI_1 | RGCY | 5 cut(s) | 246, 252, 298, 849, 903 |
| CviQI | GTAC | 3 cut(s) | 449, 588, 603 |
| DpnI | GATC | 6 cut(s) | 14, 315, 351, 407, 411, 1052 |
| DpnII | GATC | 6 cut(s) | 12, 313, 349, 405, 409, 1050 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 46 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 46 |
| Eco130I | CCWWGG | 1 cut(s) | 486 |
| Eco147I | AGGCCT | 1 cut(s) | 849 |
| Eco57I | CTGAAG | 1 cut(s) | 825 |
| EcoRII | CCWGG | 1 cut(s) | 658 |
| EcoT14I | CCWWGG | 1 cut(s) | 486 |
| ErhI | CCWWGG | 1 cut(s) | 486 |
| FaeI | CATG | 4 cut(s) | 47, 76, 179, 775 |
| FatI | CATG | 4 cut(s) | 43, 72, 175, 771 |
| FbaI | TGATCA | 1 cut(s) | 313 |
| Fnu4HI | GCNGC | 6 cut(s) | 147, 162, 267, 567, 642, 645 |
| FokI | GGATG | 3 cut(s) | 672, 746, 1000 |
| Fsp4HI | GCNGC | 6 cut(s) | 147, 162, 267, 567, 642, 645 |
| FspBI | CTAG | 2 cut(s) | 8, 1054 |
| GluI | GCNGC | 6 cut(s) | 147, 162, 267, 567, 642, 645 |
| GsuI | CTGGAG | 1 cut(s) | 201 |
| HaeIII | GGCC | 3 cut(s) | 246, 849, 903 |
| Hin1II | CATG | 4 cut(s) | 47, 76, 179, 775 |
| HindIII | AAGCTT | 1 cut(s) | 296 |
| HinfI | GANTC | 6 cut(s) | 4, 47, 206, 272, 497, 544 |
| HphI | GGTGA | 4 cut(s) | 272, 619, 674, 847 |
| Hpy188I | TCNGA | 4 cut(s) | 99, 502, 733, 805 |
| HpyCH4III | ACNGT | 5 cut(s) | 60, 379, 427, 607, 655 |
| HpyCH4IV | ACGT | 2 cut(s) | 791, 796 |
| HpyCH4V | TGCA | 5 cut(s) | 383, 439, 479, 644, 991 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 566 |
| HpySE526I | ACGT | 2 cut(s) | 791, 796 |
| Hsp92II | CATG | 4 cut(s) | 47, 76, 179, 775 |
| Ksp22I | TGATCA | 1 cut(s) | 313 |
| Kzo9I | GATC | 6 cut(s) | 12, 313, 349, 405, 409, 1050 |
| LpnPI | CCDG | 7 cut(s) | 231, 260, 314, 645, 672, 945, 981 |
| Lsp1109I | GCAGC | 4 cut(s) | 158, 173, 628, 656 |
| LweI | GCATC | 1 cut(s) | 978 |
| MaeI | CTAG | 2 cut(s) | 8, 1054 |
| MaeII | ACGT | 2 cut(s) | 791, 796 |
| MaeIII | GTNAC | 6 cut(s) | 278, 399, 625, 792, 853, 970 |
| MalI | GATC | 6 cut(s) | 14, 315, 351, 407, 411, 1052 |
| MboI | GATC | 6 cut(s) | 12, 313, 349, 405, 409, 1050 |
| MboII | GAAGA | 3 cut(s) | 101, 744, 818 |
| MflI | RGATCY | 1 cut(s) | 1050 |
| MhlI | GDGCHC | 1 cut(s) | 619 |
| MluCI | AATT | 8 cut(s) | 35, 93, 137, 261, 287, 530, 554, 992 |
| MlyI | GAGTC | 1 cut(s) | 56 |
| MnlI | CCTC | 6 cut(s) | 78, 164, 457, 869, 985, 1025 |
| MroXI | GAANNNNTTC | 1 cut(s) | 93 |
| MseI | TTAA | 2 cut(s) | 201, 698 |
| MslI | CAYNNNNRTG | 4 cut(s) | 632, 836, 881, 986 |
| MspA1I | CMGCKG | 1 cut(s) | 269 |
| MspR9I | CCNGG | 1 cut(s) | 660 |
| Mva1269I | GAATGC | 2 cut(s) | 647, 783 |
| MvaI | CCWGG | 1 cut(s) | 660 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 566 |
| NdeII | GATC | 6 cut(s) | 12, 313, 349, 405, 409, 1050 |
| NlaIII | CATG | 4 cut(s) | 47, 76, 179, 775 |
| NmuCI | GTSAC | 5 cut(s) | 278, 399, 625, 792, 853 |
| NspI | RCATGY | 1 cut(s) | 179 |
| PceI | AGGCCT | 1 cut(s) | 849 |
| PctI | GAATGC | 2 cut(s) | 647, 783 |
| PdmI | GAANNNNTTC | 1 cut(s) | 93 |
| PfeI | GAWTC | 5 cut(s) | 4, 206, 272, 497, 544 |
| PkrI | GCNGC | 6 cut(s) | 148, 163, 268, 568, 643, 646 |
| PleI | GAGTC | 1 cut(s) | 55 |
| PpsI | GAGTC | 1 cut(s) | 55 |
| PsiI | TTATAA | 3 cut(s) | 126, 294, 302 |
| Psp6I | CCWGG | 1 cut(s) | 658 |
| PspGI | CCWGG | 1 cut(s) | 658 |
| PstI | CTGCAG | 1 cut(s) | 646 |
| PstNI | CAGNNNCTG | 1 cut(s) | 659 |
| PsuI | RGATCY | 1 cut(s) | 1050 |
| RsaI | GTAC | 3 cut(s) | 450, 589, 604 |
| RsaNI | GTAC | 3 cut(s) | 449, 588, 603 |
| RseI | CAYNNNNRTG | 4 cut(s) | 632, 836, 881, 986 |
| SaqAI | TTAA | 2 cut(s) | 201, 698 |
| SatI | GCNGC | 6 cut(s) | 147, 162, 267, 567, 642, 645 |
| Sau3AI | GATC | 6 cut(s) | 12, 313, 349, 405, 409, 1050 |
| SchI | GAGTC | 1 cut(s) | 56 |
| ScrFI | CCNGG | 1 cut(s) | 660 |
| SduI | GDGCHC | 1 cut(s) | 619 |
| SfaNI | GCATC | 1 cut(s) | 978 |
| SfcI | CTRYAG | 1 cut(s) | 642 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 632, 836, 881, 986 |
| Sse9I | AATT | 8 cut(s) | 35, 93, 137, 261, 287, 530, 554, 992 |
| SseBI | AGGCCT | 1 cut(s) | 849 |
| SsiI | CCGC | 2 cut(s) | 267, 566 |
| SspI | AATATT | 1 cut(s) | 1041 |
| SspMI | CTAG | 2 cut(s) | 8, 1054 |
| StuI | AGGCCT | 1 cut(s) | 849 |
| StyD4I | CCNGG | 1 cut(s) | 658 |
| StyI | CCWWGG | 1 cut(s) | 486 |
| TaaI | ACNGT | 5 cut(s) | 60, 379, 427, 607, 655 |
| TaiI | ACGT | 2 cut(s) | 794, 799 |
| TaqI | TCGA | 3 cut(s) | 116, 408, 932 |
| TasI | AATT | 8 cut(s) | 35, 93, 137, 261, 287, 530, 554, 992 |
| TatI | WGTACW | 1 cut(s) | 448 |
| TauI | GCSGC | 2 cut(s) | 269, 569 |
| TfiI | GAWTC | 5 cut(s) | 4, 206, 272, 497, 544 |
| Tru1I | TTAA | 2 cut(s) | 201, 698 |
| Tru9I | TTAA | 2 cut(s) | 201, 698 |
| TseFI | GTSAC | 5 cut(s) | 278, 399, 625, 792, 853 |
| TseI | GCWGC | 4 cut(s) | 146, 161, 641, 644 |
| Tsp45I | GTSAC | 5 cut(s) | 278, 399, 625, 792, 853 |
| TspDTI | ATGAA | 4 cut(s) | 17, 47, 252, 970 |
| TspGWI | ACGGA | 3 cut(s) | 554, 936, 987 |
| XapI | RAATTY | 2 cut(s) | 93, 287 |
| XceI | RCATGY | 1 cut(s) | 179 |
| XmnI | GAANNNNTTC | 1 cut(s) | 93 |
| XspI | CTAG | 2 cut(s) | 8, 1054 |