protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 134 - 239 | 1.6e-17 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 96 |
| AccII | CGCG | 1 cut(s) | 252 |
| AccIII | TCCGGA | 1 cut(s) | 165 |
| AciI | CCGC | 2 cut(s) | 471, 863 |
| AcsI | RAATTY | 2 cut(s) | 90, 305 |
| AcvI | CACGTG | 1 cut(s) | 335 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 393 |
| AgeI | ACCGGT | 1 cut(s) | 488 |
| AgsI | TTSAA | 6 cut(s) | 62, 74, 227, 268, 321, 523 |
| AjiI | CACGTC | 1 cut(s) | 600 |
| AjnI | CCWGG | 2 cut(s) | 466, 895 |
| AluBI | AGCT | 5 cut(s) | 16, 112, 404, 464, 517 |
| AluI | AGCT | 5 cut(s) | 16, 112, 404, 464, 517 |
| Alw21I | GWGCWC | 1 cut(s) | 427 |
| Alw26I | GTCTC | 1 cut(s) | 129 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 467 |
| Ama87I | CYCGRG | 1 cut(s) | 113 |
| Aor13HI | TCCGGA | 1 cut(s) | 165 |
| AoxI | GGCC | 1 cut(s) | 655 |
| ApeKI | GCWGC | 2 cut(s) | 188, 401 |
| ApoI | RAATTY | 2 cut(s) | 90, 305 |
| AsiGI | ACCGGT | 1 cut(s) | 488 |
| AspS9I | GGNCC | 1 cut(s) | 839 |
| AvaI | CYCGRG | 1 cut(s) | 113 |
| AvaII | GGWCC | 1 cut(s) | 839 |
| BaeGI | GKGCMC | 1 cut(s) | 712 |
| BbrPI | CACGTG | 1 cut(s) | 335 |
| BbsI | GAAGAC | 2 cut(s) | 485, 621 |
| Bbv12I | GWGCWC | 1 cut(s) | 427 |
| BbvI | GCAGC | 2 cut(s) | 200, 413 |
| BccI | CCATC | 1 cut(s) | 722 |
| BciT130I | CCWGG | 2 cut(s) | 468, 897 |
| BclI | TGATCA | 1 cut(s) | 693 |
| BcoDI | GTCTC | 1 cut(s) | 129 |
| BfaI | CTAG | 2 cut(s) | 17, 291 |
| BfmI | CTRYAG | 2 cut(s) | 417, 450 |
| BisI | GCNGC | 2 cut(s) | 189, 402 |
| BlsI | GCNGC | 2 cut(s) | 190, 403 |
| Bme1390I | CCNGG | 2 cut(s) | 468, 897 |
| Bme18I | GGWCC | 1 cut(s) | 839 |
| BmeT110I | CYCGRG | 1 cut(s) | 113 |
| BmgBI | CACGTC | 1 cut(s) | 600 |
| BmgT120I | GGNCC | 1 cut(s) | 839 |
| BmrFI | CCNGG | 2 cut(s) | 468, 897 |
| BmrI | ACTGGG | 1 cut(s) | 197 |
| BmsI | GCATC | 1 cut(s) | 818 |
| BmuI | ACTGGG | 1 cut(s) | 197 |
| BpiI | GAAGAC | 2 cut(s) | 485, 621 |
| BsaAI | YACGTR | 1 cut(s) | 335 |
| BsaWI | WCCGGW | 3 cut(s) | 165, 488, 751 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 393 |
| Bse118I | RCCGGY | 1 cut(s) | 488 |
| Bse1I | ACTGG | 1 cut(s) | 203 |
| BseAI | TCCGGA | 1 cut(s) | 165 |
| BseBI | CCWGG | 2 cut(s) | 468, 897 |
| BseGI | GGATG | 1 cut(s) | 376 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 393 |
| BseMII | CTCAG | 1 cut(s) | 552 |
| BseNI | ACTGG | 1 cut(s) | 203 |
| BseRI | GAGGAG | 1 cut(s) | 64 |
| BseSI | GKGCMC | 1 cut(s) | 712 |
| BseXI | GCAGC | 2 cut(s) | 200, 413 |
| BsgI | GTGCAG | 1 cut(s) | 207 |
| Bsh1236I | CGCG | 1 cut(s) | 252 |
| BshFI | GGCC | 1 cut(s) | 657 |
| BshTI | ACCGGT | 1 cut(s) | 488 |
| BsiHKAI | GWGCWC | 1 cut(s) | 427 |
| BsiHKCI | CYCGRG | 1 cut(s) | 113 |
| BsiSI | CCGG | 3 cut(s) | 166, 489, 752 |
| BslFI | GGGAC | 1 cut(s) | 603 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 393 |
| BsmAI | GTCTC | 1 cut(s) | 129 |
| BsmBI | CGTCTC | 1 cut(s) | 129 |
| BsmFI | GGGAC | 1 cut(s) | 603 |
| BsmI | GAATGC | 1 cut(s) | 455 |
| BsnI | GGCC | 1 cut(s) | 657 |
| BsoBI | CYCGRG | 1 cut(s) | 113 |
| Bsp1286I | GDGCHC | 2 cut(s) | 427, 712 |
| Bsp13I | TCCGGA | 1 cut(s) | 165 |
| Bsp143I | GATC | 3 cut(s) | 693, 879, 904 |
| BspACI | CCGC | 2 cut(s) | 471, 863 |
| BspANI | GGCC | 1 cut(s) | 657 |
| BspCNI | CTCAG | 1 cut(s) | 551 |
| BspEI | TCCGGA | 1 cut(s) | 165 |
| BspFNI | CGCG | 1 cut(s) | 252 |
| BsrFI | RCCGGY | 1 cut(s) | 488 |
| BsrI | ACTGG | 1 cut(s) | 203 |
| BssAI | RCCGGY | 1 cut(s) | 488 |
| BssMI | GATC | 3 cut(s) | 693, 879, 904 |
| Bst2UI | CCWGG | 2 cut(s) | 468, 897 |
| Bst4CI | ACNGT | 3 cut(s) | 185, 418, 772 |
| BstBAI | YACGTR | 1 cut(s) | 335 |
| BstC8I | GCNNGC | 1 cut(s) | 865 |
| BstDEI | CTNAG | 1 cut(s) | 538 |
| BstF5I | GGATG | 1 cut(s) | 376 |
| BstFNI | CGCG | 1 cut(s) | 252 |
| BstKTI | GATC | 3 cut(s) | 696, 882, 907 |
| BstMAI | GTCTC | 1 cut(s) | 129 |
| BstMBI | GATC | 3 cut(s) | 693, 879, 904 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 383, 461, 514 |
| BstNI | CCWGG | 2 cut(s) | 468, 897 |
| BstSCI | CCNGG | 2 cut(s) | 466, 895 |
| BstSFI | CTRYAG | 2 cut(s) | 417, 450 |
| BstSLI | GKGCMC | 1 cut(s) | 712 |
| BstUI | CGCG | 1 cut(s) | 252 |
| BstV1I | GCAGC | 2 cut(s) | 200, 413 |
| BstV2I | GAAGAC | 2 cut(s) | 485, 621 |
| BsuRI | GGCC | 1 cut(s) | 657 |
| BtrI | CACGTC | 1 cut(s) | 600 |
| BtsCI | GGATG | 1 cut(s) | 376 |
| BtsIMutI | CAGTG | 1 cut(s) | 190 |
| Cac8I | GCNNGC | 1 cut(s) | 865 |
| CaiI | CAGNNNCTG | 1 cut(s) | 467 |
| Cfr10I | RCCGGY | 1 cut(s) | 488 |
| Cfr13I | GGNCC | 1 cut(s) | 839 |
| CspAI | ACCGGT | 1 cut(s) | 488 |
| CviAII | CATG | 3 cut(s) | 302, 388, 688 |
| CviJI | RGCY | 7 cut(s) | 16, 112, 386, 404, 464, 517, 657 |
| CviKI_1 | RGCY | 7 cut(s) | 16, 112, 386, 404, 464, 517, 657 |
| DdeI | CTNAG | 1 cut(s) | 538 |
| DpnI | GATC | 3 cut(s) | 695, 881, 906 |
| DpnII | GATC | 3 cut(s) | 693, 879, 904 |
| EciI | GGCGGA | 1 cut(s) | 486 |
| Eco147I | AGGCCT | 1 cut(s) | 657 |
| Eco32I | GATATC | 1 cut(s) | 31 |
| Eco47I | GGWCC | 1 cut(s) | 839 |
| Eco72I | CACGTG | 1 cut(s) | 335 |
| Eco88I | CYCGRG | 1 cut(s) | 113 |
| EcoRII | CCWGG | 2 cut(s) | 466, 895 |
| EcoRV | GATATC | 1 cut(s) | 31 |
| EcoT22I | ATGCAT | 2 cut(s) | 303, 510 |
| Esp3I | CGTCTC | 1 cut(s) | 129 |
| FaeI | CATG | 3 cut(s) | 305, 391, 691 |
| FaqI | GGGAC | 1 cut(s) | 603 |
| FatI | CATG | 3 cut(s) | 301, 387, 687 |
| FauI | CCCGC | 1 cut(s) | 856 |
| FbaI | TGATCA | 1 cut(s) | 693 |
| Fnu4HI | GCNGC | 2 cut(s) | 189, 402 |
| FokI | GGATG | 1 cut(s) | 383 |
| Fsp4HI | GCNGC | 2 cut(s) | 189, 402 |
| FspBI | CTAG | 2 cut(s) | 17, 291 |
| GluI | GCNGC | 2 cut(s) | 189, 402 |
| HaeIII | GGCC | 1 cut(s) | 657 |
| HapII | CCGG | 3 cut(s) | 166, 489, 752 |
| Hin1II | CATG | 3 cut(s) | 305, 391, 691 |
| HincII | GTYRAC | 1 cut(s) | 603 |
| HindII | GTYRAC | 1 cut(s) | 603 |
| HpaII | CCGG | 3 cut(s) | 166, 489, 752 |
| Hpy166II | GTNNAC | 2 cut(s) | 338, 603 |
| Hpy188I | TCNGA | 2 cut(s) | 429, 541 |
| Hpy188III | TCNNGA | 3 cut(s) | 83, 166, 523 |
| Hpy8I | GTNNAC | 2 cut(s) | 338, 603 |
| Hpy99I | CGWCG | 1 cut(s) | 782 |
| HpyAV | CCTTC | 1 cut(s) | 852 |
| HpyCH4III | ACNGT | 3 cut(s) | 185, 418, 772 |
| HpyCH4IV | ACGT | 4 cut(s) | 334, 581, 599, 698 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 383, 461, 514 |
| HpyF3I | CTNAG | 1 cut(s) | 538 |
| HpySE526I | ACGT | 4 cut(s) | 334, 581, 599, 698 |
| Hsp92II | CATG | 3 cut(s) | 305, 391, 691 |
| Kpn2I | TCCGGA | 1 cut(s) | 165 |
| Ksp22I | TGATCA | 1 cut(s) | 693 |
| Kzo9I | GATC | 3 cut(s) | 693, 879, 904 |
| LmnI | GCTCC | 1 cut(s) | 469 |
| LpnPI | CCDG | 7 cut(s) | 179, 216, 453, 480, 502, 765, 882 |
| Lsp1109I | GCAGC | 2 cut(s) | 200, 413 |
| LweI | GCATC | 1 cut(s) | 818 |
| MaeI | CTAG | 2 cut(s) | 17, 291 |
| MaeII | ACGT | 4 cut(s) | 334, 581, 599, 698 |
| MaeIII | GTNAC | 4 cut(s) | 205, 285, 433, 482 |
| MalI | GATC | 3 cut(s) | 695, 881, 906 |
| MboI | GATC | 3 cut(s) | 693, 879, 904 |
| MboII | GAAGA | 4 cut(s) | 399, 485, 552, 626 |
| MhlI | GDGCHC | 2 cut(s) | 427, 712 |
| MluCI | AATT | 7 cut(s) | 90, 305, 362, 576, 644, 747, 792 |
| MnlI | CCTC | 4 cut(s) | 42, 109, 265, 818 |
| Mph1103I | ATGCAT | 2 cut(s) | 303, 510 |
| MroI | TCCGGA | 1 cut(s) | 165 |
| MseI | TTAA | 3 cut(s) | 6, 216, 365 |
| MspI | CCGG | 3 cut(s) | 166, 489, 752 |
| MspR9I | CCNGG | 2 cut(s) | 468, 897 |
| Mva1269I | GAATGC | 1 cut(s) | 455 |
| MvaI | CCWGG | 2 cut(s) | 468, 897 |
| MvnI | CGCG | 1 cut(s) | 252 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 383, 461, 514 |
| NdeII | GATC | 3 cut(s) | 693, 879, 904 |
| NlaIII | CATG | 3 cut(s) | 305, 391, 691 |
| NsiI | ATGCAT | 2 cut(s) | 303, 510 |
| PaeR7I | CTCGAG | 1 cut(s) | 113 |
| PceI | AGGCCT | 1 cut(s) | 657 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 578 |
| PctI | GAATGC | 1 cut(s) | 455 |
| PinAI | ACCGGT | 1 cut(s) | 488 |
| PkrI | GCNGC | 2 cut(s) | 190, 403 |
| PmaCI | CACGTG | 1 cut(s) | 335 |
| PmlI | CACGTG | 1 cut(s) | 335 |
| Ppu21I | YACGTR | 1 cut(s) | 335 |
| PsiI | TTATAA | 1 cut(s) | 96 |
| Psp6I | CCWGG | 2 cut(s) | 466, 895 |
| PspCI | CACGTG | 1 cut(s) | 335 |
| PspGI | CCWGG | 2 cut(s) | 466, 895 |
| PspPI | GGNCC | 1 cut(s) | 839 |
| PspXI | VCTCGAGB | 1 cut(s) | 113 |
| PstNI | CAGNNNCTG | 1 cut(s) | 467 |
| SaqAI | TTAA | 3 cut(s) | 6, 216, 365 |
| SatI | GCNGC | 2 cut(s) | 189, 402 |
| Sau3AI | GATC | 3 cut(s) | 693, 879, 904 |
| Sau96I | GGNCC | 1 cut(s) | 839 |
| ScrFI | CCNGG | 2 cut(s) | 468, 897 |
| SduI | GDGCHC | 2 cut(s) | 427, 712 |
| SfaNI | GCATC | 1 cut(s) | 818 |
| SfcI | CTRYAG | 2 cut(s) | 417, 450 |
| Sfr274I | CTCGAG | 1 cut(s) | 113 |
| SinI | GGWCC | 1 cut(s) | 839 |
| SlaI | CTCGAG | 1 cut(s) | 113 |
| SmlI | CTYRAG | 1 cut(s) | 113 |
| SmoI | CTYRAG | 1 cut(s) | 113 |
| Sse9I | AATT | 7 cut(s) | 90, 305, 362, 576, 644, 747, 792 |
| SseBI | AGGCCT | 1 cut(s) | 657 |
| SsiI | CCGC | 2 cut(s) | 471, 863 |
| SspI | AATATT | 1 cut(s) | 100 |
| SspMI | CTAG | 2 cut(s) | 17, 291 |
| StuI | AGGCCT | 1 cut(s) | 657 |
| StyD4I | CCNGG | 2 cut(s) | 466, 895 |
| TaaI | ACNGT | 3 cut(s) | 185, 418, 772 |
| TaiI | ACGT | 4 cut(s) | 337, 584, 602, 701 |
| TaqI | TCGA | 3 cut(s) | 114, 845, 878 |
| TasI | AATT | 7 cut(s) | 90, 305, 362, 576, 644, 747, 792 |
| Tru1I | TTAA | 3 cut(s) | 6, 216, 365 |
| Tru9I | TTAA | 3 cut(s) | 6, 216, 365 |
| TscAI | CASTG | 1 cut(s) | 190 |
| TseI | GCWGC | 2 cut(s) | 188, 401 |
| TspDTI | ATGAA | 3 cut(s) | 318, 387, 404 |
| TspRI | CASTG | 1 cut(s) | 190 |
| VpaK11BI | GGWCC | 1 cut(s) | 839 |
| XapI | RAATTY | 2 cut(s) | 90, 305 |
| XhoI | CTCGAG | 1 cut(s) | 113 |
| XspI | CTAG | 2 cut(s) | 17, 291 |
| Zsp2I | ATGCAT | 2 cut(s) | 303, 510 |