Rh7DG448000

protein ubiquitination

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000027
Physical Location & Seq
Forward (+)
63571736 .. 63600054
28319 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG448000.1

Sequence Viewer

Length: 1317 bp
ATGCCAGGAAATCAGAACAGTTCCAACTATCACTTCGACTCCAGCTATGAACCTTTCTTTGATTCTGTTGTGAATGGTGACTGGGATAATGCTAAGGAGTGCCTTGCTACATTACTACTTCCTAATGTACTAAGAGCAAGAAGTCCAGCAGCTAGAGGATCTACAGCTCTTCACATTGCAGCGAGGGAAGGGCATGTGCATATTGTAAAAGAGTTGGTGTTGTTGATGACTCAAGAAGATCTGGAAATAAGAGATGATAATGGTTGCACCGCTCTTCACATAGCAGTACAGAAGGAGAATGTGGACGCTGTGAAAGAGGTGGTGCCGTTGATGAGACAACAGGGCTTGGGAATAAAAAACAAAAATTATGGTGAAACTGCTCTTCATGTAGCAGCTGGGAGTGGGAATGTGCATATTGCCAAAGAGTTGGGAGAGTTGATGAGGGAAGAAGATTTGGAAATAGGAAACTCCAACAATTGCCACGCTCTTCACATAGCACTCTTGAAAGGGCACGTGCATATTGGGAAAGAGTTGGTAGCATTGATGAGAAAAGAAGCTTTGGAAATAAATGATGGACAAGGCTATACGGCTTTAGGTCGTGCCATAAGGTTATGCCACCAGCGAGGAGACGAGTACAGTGAAGGAGCTGTGATCGAAATGATTAAACCCATGGTTGCAAAGAACCAGAAAATACTTGGCATTGTGGCTTCTCCCAATGACTACATTCCAGTTGTGGAGGCTTGCATGTTGTTAAAATTCCAATTGGGCCGCTATCTGTATTCCGTTACTCCACGGGAAGCTTTAATGCCGCAAAAGAACAGATGGCAAGGTGCTTCACTATTTGTGTTTTGTCTTGGAGCGAAGGAATTTGATATTCCGTGGGACTTACTTTCAAATTGCCCAAGGTTGGCCACGGTTGAAACTGTACATGGAGGCAATTCTCCGATCTTGGTATTGTCTCGTATGCACTCTGCATTCTTAAGTGGAATGCAACTCAAATTTTGGCAAAAATGGATCTATGAAGGTATAAATATACAAGCTCCCGCTATTTTTGATATTCATGATCTTTCTATACCTGTTTCAATCTCAGAAGATGATGGAGGTACTCAAAGGGATGTCGTTGTCTCAGGTGAACTCGGTAAACAATTAAATTGCAATTCCAAGCAGCTTCTGGTTTTATCAGATACCCATAAATGTACTTTCCTTGCAATTGAAGGTTTGTTCTGTGCTTTGCATATTGGACGGAGAGGCGTCGTTTTGCCAATTCTTTCAAGCTTTGCCGATAGAGGTCAAACGTCAAAACAAATCGATCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

438

Amino Acids

48.37

Weight (kDa)

6.19

Isoelectric Point (pI)

45.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 35 - 106 8.8e-12 Ankyrin repeats (3 copies)
Ank_5 PF13857 52 - 95 4.7e-06 Ankyrin repeats (many copies)
Ank_4 PF13637 57 - 105 1.9e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 75 - 143 1.8e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 115 - 179 3.7e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 322
AccBSI CCGCTC 1 cut(s) 272
AciI CCGC 4 cut(s) 270, 769, 809, 1044
AclWI GGATC 2 cut(s) 166, 1022
AcoI YGGCCR 1 cut(s) 909
AcsI RAATTY 3 cut(s) 755, 866, 998
AcvI CACGTG 1 cut(s) 514
AcyI GRCGYC 1 cut(s) 1251
AfaI GTAC 6 cut(s) 129, 288, 635, 927, 1105, 1198
AfiI CCNNNNNNNGG 1 cut(s) 907
AflII CTTAAG 1 cut(s) 979
AgsI TTSAA 6 cut(s) 505, 894, 920, 1083, 1214, 1272
AjnI CCWGG 1 cut(s) 4
AjuI GAANNNNNNNTTGG 2 cut(s) 17, 49
Alw26I GTCTC 4 cut(s) 328, 621, 963, 1129
AlwI GGATC 2 cut(s) 166, 1022
AlwNI CAGNNNCTG 1 cut(s) 1171
AoxI GGCC 2 cut(s) 766, 909
ApeKI GCWGC 4 cut(s) 149, 179, 392, 1165
ApoI RAATTY 3 cut(s) 755, 866, 998
AspS9I GGNCC 1 cut(s) 766
AsuHPI GGTGA 3 cut(s) 89, 383, 1142
BaeGI GKGCMC 1 cut(s) 513
BalI TGGCCA 1 cut(s) 911
BanI GGYRCC 1 cut(s) 322
BbrPI CACGTG 1 cut(s) 514
BbvI GCAGC 4 cut(s) 161, 191, 404, 1177
BccI CCATC 3 cut(s) 566, 816, 1091
BceAI ACGGC 2 cut(s) 310, 603
BciT130I CCWGG 1 cut(s) 6
BcoDI GTCTC 4 cut(s) 328, 621, 963, 1129
BfaI CTAG 1 cut(s) 153
BfmI CTRYAG 1 cut(s) 162
BfrI CTTAAG 1 cut(s) 979
BglII AGATCT 1 cut(s) 238
BisI GCNGC 6 cut(s) 150, 180, 393, 769, 809, 1166
BlsI GCNGC 6 cut(s) 151, 181, 394, 770, 810, 1167
Bme1390I CCNGG 1 cut(s) 6
BmgT120I GGNCC 1 cut(s) 766
BmiI GGNNCC 1 cut(s) 324
BmrFI CCNGG 1 cut(s) 6
BmrI ACTGGG 1 cut(s) 91
BmuI ACTGGG 1 cut(s) 91
BpmI CTGGAG 1 cut(s) 25
Bpu10I CCTNAGC 1 cut(s) 93
BpuEI CTTGAG 1 cut(s) 216
Bsa29I ATCGAT 2 cut(s) 1308, 1312
BsaAI YACGTR 1 cut(s) 514
BsaHI GRCGYC 1 cut(s) 1251
BsaJI CCNNGG 5 cut(s) 669, 791, 878, 902, 912
BsaXI ACNNNNNCTCC 2 cut(s) 23, 53
Bsc4I CCNNNNNNNGG 1 cut(s) 907
Bse1I ACTGG 2 cut(s) 86, 728
Bse3DI GCAATG 1 cut(s) 174
BseBI CCWGG 1 cut(s) 6
BseCI ATCGAT 2 cut(s) 1308, 1312
BseDI CCNNGG 5 cut(s) 669, 791, 878, 902, 912
BseGI GGATG 1 cut(s) 1120
BseLI CCNNNNNNNGG 1 cut(s) 907
BseMI GCAATG 1 cut(s) 174
BseMII CTCAG 2 cut(s) 1101, 1140
BseNI ACTGG 2 cut(s) 86, 728
BseRI GAGGAG 1 cut(s) 639
BseSI GKGCMC 1 cut(s) 513
BseXI GCAGC 4 cut(s) 161, 191, 404, 1177
BseYI CCCAGC 1 cut(s) 395
Bsh1285I CGRYCG 1 cut(s) 1312
BshFI GGCC 2 cut(s) 768, 911
BshNI GGYRCC 1 cut(s) 322
BshVI ATCGAT 2 cut(s) 1308, 1312
BsiEI CGRYCG 1 cut(s) 1312
BslFI GGGAC 1 cut(s) 896
BslI CCNNNNNNNGG 1 cut(s) 907
BsmAI GTCTC 4 cut(s) 328, 621, 963, 1129
BsmBI CGTCTC 1 cut(s) 621
BsmFI GGGAC 1 cut(s) 896
BsmI GAATGC 2 cut(s) 974, 993
BsnI GGCC 2 cut(s) 768, 911
Bsp1286I GDGCHC 1 cut(s) 513
Bsp1407I TGTACA 1 cut(s) 925
Bsp143I GATC 7 cut(s) 158, 238, 651, 945, 1014, 1063, 1309
Bsp19I CCATGG 1 cut(s) 669
BspACI CCGC 4 cut(s) 270, 769, 809, 1044
BspANI GGCC 2 cut(s) 768, 911
BspCNI CTCAG 2 cut(s) 1100, 1139
BspDI ATCGAT 2 cut(s) 1308, 1312
BspHI TCATGA 1 cut(s) 1060
BspLI GGNNCC 1 cut(s) 324
BspPI GGATC 2 cut(s) 166, 1022
BspQI GCTCTTC 4 cut(s) 174, 279, 387, 492
BspT107I GGYRCC 1 cut(s) 322
BspTI CTTAAG 1 cut(s) 979
BsrBI CCGCTC 1 cut(s) 272
BsrDI GCAATG 1 cut(s) 174
BsrGI TGTACA 1 cut(s) 925
BsrI ACTGG 2 cut(s) 86, 728
BssECI CCNNGG 5 cut(s) 669, 791, 878, 902, 912
BssMI GATC 7 cut(s) 158, 238, 651, 945, 1014, 1063, 1309
BssNI GRCGYC 1 cut(s) 1251
BssT1I CCWWGG 2 cut(s) 669, 902
Bst2UI CCWGG 1 cut(s) 6
Bst4CI ACNGT 4 cut(s) 20, 638, 916, 925
Bst6I CTCTTC 4 cut(s) 174, 279, 387, 492
BstACI GRCGYC 1 cut(s) 1251
BstAFI CTTAAG 1 cut(s) 979
BstAUI TGTACA 1 cut(s) 925
BstBAI YACGTR 1 cut(s) 514
BstC8I GCNNGC 1 cut(s) 742
BstDEI CTNAG 4 cut(s) 93, 131, 1087, 1126
BstDSI CCRYGG 4 cut(s) 669, 791, 878, 912
BstF5I GGATG 1 cut(s) 1120
BstKTI GATC 7 cut(s) 161, 241, 654, 948, 1017, 1066, 1312
BstMAI GTCTC 4 cut(s) 328, 621, 963, 1129
BstMBI GATC 7 cut(s) 158, 238, 651, 945, 1014, 1063, 1309
BstMCI CGRYCG 1 cut(s) 1312
BstNI CCWGG 1 cut(s) 6
BstNSI RCATGY 2 cut(s) 197, 748
BstSCI CCNGG 1 cut(s) 4
BstSFI CTRYAG 1 cut(s) 162
BstSLI GKGCMC 1 cut(s) 513
BstV1I GCAGC 4 cut(s) 161, 191, 404, 1177
BstX2I RGATCY 3 cut(s) 158, 238, 1014
BstXI CCANNNNNNTGG 1 cut(s) 427
BstYI RGATCY 3 cut(s) 158, 238, 1014
Bsu15I ATCGAT 2 cut(s) 1308, 1312
BsuRI GGCC 2 cut(s) 768, 911
BsuTUI ATCGAT 2 cut(s) 1308, 1312
BtgI CCRYGG 4 cut(s) 669, 791, 878, 912
BtsCI GGATG 1 cut(s) 1120
BtsIMutI CAGTG 1 cut(s) 643
Cac8I GCNNGC 1 cut(s) 742
CaiI CAGNNNCTG 1 cut(s) 1171
CciI TCATGA 1 cut(s) 1060
Cfr13I GGNCC 1 cut(s) 766
ClaI ATCGAT 2 cut(s) 1308, 1312
CseI GACGC 2 cut(s) 314, 1240
Csp6I GTAC 6 cut(s) 128, 287, 634, 926, 1104, 1197
CviAII CATG 6 cut(s) 194, 386, 670, 745, 929, 1061
CviQI GTAC 6 cut(s) 128, 287, 634, 926, 1104, 1197
DdeI CTNAG 4 cut(s) 93, 131, 1087, 1126
DpnI GATC 7 cut(s) 160, 240, 653, 947, 1016, 1065, 1311
DpnII GATC 7 cut(s) 158, 238, 651, 945, 1014, 1063, 1309
EaeI YGGCCR 1 cut(s) 909
Eam1104I CTCTTC 4 cut(s) 174, 279, 387, 492
EarI CTCTTC 4 cut(s) 174, 279, 387, 492
Eco130I CCWWGG 2 cut(s) 669, 902
Eco72I CACGTG 1 cut(s) 514
EcoRII CCWGG 1 cut(s) 4
EcoT14I CCWWGG 2 cut(s) 669, 902
ErhI CCWWGG 2 cut(s) 669, 902
Esp3I CGTCTC 1 cut(s) 621
FaeI CATG 6 cut(s) 197, 389, 673, 748, 932, 1064
FaqI GGGAC 1 cut(s) 896
FatI CATG 6 cut(s) 193, 385, 669, 744, 928, 1060
FauI CCCGC 1 cut(s) 1051
Fnu4HI GCNGC 6 cut(s) 150, 180, 393, 769, 809, 1166
FokI GGATG 1 cut(s) 1127
Fsp4HI GCNGC 6 cut(s) 150, 180, 393, 769, 809, 1166
FspBI CTAG 1 cut(s) 153
GluI GCNGC 6 cut(s) 150, 180, 393, 769, 809, 1166
GsaI CCCAGC 1 cut(s) 399
GsuI CTGGAG 1 cut(s) 25
HaeIII GGCC 2 cut(s) 768, 911
HgaI GACGC 2 cut(s) 314, 1240
Hin1I GRCGYC 1 cut(s) 1251
Hin1II CATG 6 cut(s) 197, 389, 673, 748, 932, 1064
HindIII AAGCTT 3 cut(s) 555, 798, 1273
HinfI GANTC 3 cut(s) 38, 62, 229
HphI GGTGA 3 cut(s) 89, 383, 1142
Hpy166II GTNNAC 3 cut(s) 304, 1133, 1142
Hpy188I TCNGA 4 cut(s) 15, 945, 1090, 1183
Hpy188III TCNNGA 4 cut(s) 233, 242, 502, 1061
Hpy8I GTNNAC 3 cut(s) 304, 1133, 1142
Hpy99I CGWCG 1 cut(s) 1256
HpyAV CCTTC 6 cut(s) 182, 286, 635, 856, 1016, 1208
HpyCH4III ACNGT 4 cut(s) 20, 638, 916, 925
HpyCH4IV ACGT 2 cut(s) 513, 1295
HpyF3I CTNAG 4 cut(s) 93, 131, 1087, 1126
HpySE526I ACGT 2 cut(s) 513, 1295
Hsp92I GRCGYC 1 cut(s) 1251
Hsp92II CATG 6 cut(s) 197, 389, 673, 748, 932, 1064
Kzo9I GATC 7 cut(s) 158, 238, 651, 945, 1014, 1063, 1309
LguI GCTCTTC 4 cut(s) 174, 279, 387, 492
LmnI GCTCC 3 cut(s) 644, 857, 1045
Lsp1109I GCAGC 4 cut(s) 161, 191, 404, 1177
MaeI CTAG 1 cut(s) 153
MaeII ACGT 2 cut(s) 513, 1295
MaeIII GTNAC 2 cut(s) 77, 784
MalI GATC 7 cut(s) 160, 240, 653, 947, 1016, 1065, 1311
MbiI CCGCTC 1 cut(s) 272
MboI GATC 7 cut(s) 158, 238, 651, 945, 1014, 1063, 1309
MboII GAAGA 8 cut(s) 161, 248, 266, 374, 458, 461, 479, 1103
MfeI CAATTG 3 cut(s) 475, 761, 1209
MflI RGATCY 3 cut(s) 158, 238, 1014
MhlI GDGCHC 1 cut(s) 513
MlsI TGGCCA 1 cut(s) 911
MluNI TGGCCA 1 cut(s) 911
MlyI GAGTC 2 cut(s) 32, 223
MmeI TCCRAC 2 cut(s) 48, 495
Mox20I TGGCCA 1 cut(s) 911
MscI TGGCCA 1 cut(s) 911
MseI TTAA 5 cut(s) 663, 752, 803, 980, 1148
Msp20I TGGCCA 1 cut(s) 911
MspA1I CMGCKG 1 cut(s) 395
MspCI CTTAAG 1 cut(s) 979
MspR9I CCNGG 1 cut(s) 6
MunI CAATTG 3 cut(s) 475, 761, 1209
Mva1269I GAATGC 2 cut(s) 974, 993
MvaI CCWGG 1 cut(s) 6
NcoI CCATGG 1 cut(s) 669
NdeII GATC 7 cut(s) 158, 238, 651, 945, 1014, 1063, 1309
NlaIII CATG 6 cut(s) 197, 389, 673, 748, 932, 1064
NlaIV GGNNCC 1 cut(s) 324
NmuCI GTSAC 1 cut(s) 77
NspI RCATGY 2 cut(s) 197, 748
PagI TCATGA 1 cut(s) 1060
PciSI GCTCTTC 4 cut(s) 174, 279, 387, 492
PctI GAATGC 2 cut(s) 974, 993
PfeI GAWTC 1 cut(s) 62
PkrI GCNGC 6 cut(s) 151, 181, 394, 770, 810, 1167
Ple19I CGATCG 1 cut(s) 1312
PleI GAGTC 2 cut(s) 32, 223
PmaCI CACGTG 1 cut(s) 514
PmlI CACGTG 1 cut(s) 514
PpsI GAGTC 2 cut(s) 32, 223
Ppu21I YACGTR 1 cut(s) 514
Psp6I CCWGG 1 cut(s) 4
PspCI CACGTG 1 cut(s) 514
PspFI CCCAGC 1 cut(s) 395
PspGI CCWGG 1 cut(s) 4
PspN4I GGNNCC 1 cut(s) 324
PspPI GGNCC 1 cut(s) 766
PstNI CAGNNNCTG 1 cut(s) 1171
PsuI RGATCY 3 cut(s) 158, 238, 1014
PvuI CGATCG 1 cut(s) 1312
PvuII CAGCTG 1 cut(s) 395
RsaI GTAC 6 cut(s) 129, 288, 635, 927, 1105, 1198
RsaNI GTAC 6 cut(s) 128, 287, 634, 926, 1104, 1197
SapI GCTCTTC 4 cut(s) 174, 279, 387, 492
SaqAI TTAA 5 cut(s) 663, 752, 803, 980, 1148
SatI GCNGC 6 cut(s) 150, 180, 393, 769, 809, 1166
Sau3AI GATC 7 cut(s) 158, 238, 651, 945, 1014, 1063, 1309
Sau96I GGNCC 1 cut(s) 766
SchI GAGTC 2 cut(s) 32, 223
ScrFI CCNGG 1 cut(s) 6
SduI GDGCHC 1 cut(s) 513
SfcI CTRYAG 1 cut(s) 162
SmlI CTYRAG 2 cut(s) 231, 979
SmoI CTYRAG 2 cut(s) 231, 979
SsiI CCGC 4 cut(s) 270, 769, 809, 1044
SspMI CTAG 1 cut(s) 153
StyD4I CCNGG 1 cut(s) 4
StyI CCWWGG 2 cut(s) 669, 902
TaaI ACNGT 4 cut(s) 20, 638, 916, 925
TaiI ACGT 2 cut(s) 516, 1298
TaqI TCGA 4 cut(s) 36, 654, 1308, 1312
TatI WGTACW 5 cut(s) 127, 286, 633, 925, 1196
TauI GCSGC 2 cut(s) 771, 811
TfiI GAWTC 1 cut(s) 62
Tru1I TTAA 5 cut(s) 663, 752, 803, 980, 1148
Tru9I TTAA 5 cut(s) 663, 752, 803, 980, 1148
TscAI CASTG 1 cut(s) 643
TseFI GTSAC 1 cut(s) 77
TseI GCWGC 4 cut(s) 149, 179, 392, 1165
Tsp45I GTSAC 1 cut(s) 77
TspDTI ATGAA 4 cut(s) 63, 374, 1035, 1049
TspGWI ACGGA 3 cut(s) 772, 867, 1258
TspRI CASTG 1 cut(s) 643
Vha464I CTTAAG 1 cut(s) 979
XapI RAATTY 3 cut(s) 755, 866, 998
XceI RCATGY 2 cut(s) 197, 748
XcmI CCANNNNNNNNNTGG 2 cut(s) 692, 1168
XspI CTAG 1 cut(s) 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.