Domain of unknown function
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 699 |
| AarI | CACCTGC | 2 cut(s) | 365, 727 |
| Acc36I | ACCTGC | 2 cut(s) | 365, 727 |
| AccI | GTMKAC | 2 cut(s) | 706, 1033 |
| AccII | CGCG | 2 cut(s) | 510, 643 |
| AccIII | TCCGGA | 2 cut(s) | 891, 1753 |
| AciI | CCGC | 4 cut(s) | 219, 395, 508, 647 |
| AclWI | GGATC | 4 cut(s) | 609, 622, 1612, 1625 |
| AcsI | RAATTY | 8 cut(s) | 306, 316, 328, 448, 661, 903, 965, 1336 |
| AcuI | CTGAAG | 4 cut(s) | 123, 354, 412, 1581 |
| AcvI | CACGTG | 1 cut(s) | 1207 |
| AfaI | GTAC | 2 cut(s) | 640, 1788 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 587 |
| AflIII | ACRYGT | 3 cut(s) | 641, 809, 915 |
| AgsI | TTSAA | 6 cut(s) | 295, 401, 666, 1091, 1265, 1291 |
| AjnI | CCWGG | 2 cut(s) | 188, 1492 |
| AleI | CACNNNNGTG | 1 cut(s) | 918 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 275, 307 |
| AluBI | AGCT | 6 cut(s) | 44, 75, 203, 585, 1259, 1448 |
| AluI | AGCT | 6 cut(s) | 44, 75, 203, 585, 1259, 1448 |
| Alw21I | GWGCWC | 1 cut(s) | 915 |
| AlwI | GGATC | 4 cut(s) | 609, 622, 1612, 1625 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1493 |
| Aor13HI | TCCGGA | 2 cut(s) | 891, 1753 |
| AoxI | GGCC | 2 cut(s) | 192, 1710 |
| ApeKI | GCWGC | 7 cut(s) | 5, 1097, 1201, 1256, 1448, 1475, 1478 |
| ApoI | RAATTY | 8 cut(s) | 306, 316, 328, 448, 661, 903, 965, 1336 |
| AseI | ATTAAT | 1 cut(s) | 1326 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 396 |
| AspLEI | GCGC | 2 cut(s) | 512, 1305 |
| AspS9I | GGNCC | 6 cut(s) | 115, 192, 419, 505, 894, 1710 |
| AsuHPI | GGTGA | 6 cut(s) | 94, 199, 242, 383, 836, 1402 |
| AvaII | GGWCC | 4 cut(s) | 115, 419, 505, 894 |
| BamHI | GGATCC | 2 cut(s) | 614, 1617 |
| BbrPI | CACGTG | 1 cut(s) | 1207 |
| BbsI | GAAGAC | 3 cut(s) | 159, 228, 829 |
| Bbv12I | GWGCWC | 1 cut(s) | 915 |
| BbvI | GCAGC | 7 cut(s) | 17, 1084, 1188, 1268, 1435, 1462, 1490 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 779, 813 |
| BciT130I | CCWGG | 2 cut(s) | 190, 1494 |
| BfaI | CTAG | 4 cut(s) | 21, 636, 908, 1794 |
| BfmI | CTRYAG | 1 cut(s) | 1476 |
| BfuAI | ACCTGC | 2 cut(s) | 365, 727 |
| BisI | GCNGC | 7 cut(s) | 6, 1098, 1202, 1257, 1449, 1476, 1479 |
| BlpI | GCTNAGC | 1 cut(s) | 1101 |
| BlsI | GCNGC | 7 cut(s) | 7, 1099, 1203, 1258, 1450, 1477, 1480 |
| Bme1390I | CCNGG | 2 cut(s) | 190, 1494 |
| Bme18I | GGWCC | 4 cut(s) | 115, 419, 505, 894 |
| BmgT120I | GGNCC | 6 cut(s) | 115, 192, 419, 505, 894, 1710 |
| BmiI | GGNNCC | 5 cut(s) | 116, 616, 1052, 1619, 1711 |
| BmrFI | CCNGG | 2 cut(s) | 190, 1494 |
| BmsI | GCATC | 5 cut(s) | 256, 258, 364, 1114, 1812 |
| BoxI | GACNNNNGTC | 1 cut(s) | 14 |
| BpiI | GAAGAC | 3 cut(s) | 159, 228, 829 |
| BpmI | CTGGAG | 1 cut(s) | 91 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1101 |
| BpuEI | CTTGAG | 2 cut(s) | 346, 1301 |
| BsaAI | YACGTR | 1 cut(s) | 1207 |
| BsaJI | CCNNGG | 1 cut(s) | 189 |
| BsaWI | WCCGGW | 2 cut(s) | 891, 1753 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 587 |
| Bse1I | ACTGG | 3 cut(s) | 74, 609, 831 |
| Bse3DI | GCAATG | 3 cut(s) | 591, 1017, 1416 |
| BseAI | TCCGGA | 2 cut(s) | 891, 1753 |
| BseBI | CCWGG | 2 cut(s) | 190, 1494 |
| BseDI | CCNNGG | 1 cut(s) | 189 |
| BseGI | GGATG | 4 cut(s) | 232, 481, 1655, 1827 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 587 |
| BseMI | GCAATG | 3 cut(s) | 591, 1017, 1416 |
| BseMII | CTCAG | 1 cut(s) | 1092 |
| BseNI | ACTGG | 3 cut(s) | 74, 609, 831 |
| BseXI | GCAGC | 7 cut(s) | 17, 1084, 1188, 1268, 1435, 1462, 1490 |
| BsgI | GTGCAG | 3 cut(s) | 705, 1187, 1275 |
| Bsh1236I | CGCG | 2 cut(s) | 510, 643 |
| BshFI | GGCC | 2 cut(s) | 194, 1712 |
| BsiHKAI | GWGCWC | 1 cut(s) | 915 |
| BsiSI | CCGG | 2 cut(s) | 892, 1754 |
| BslFI | GGGAC | 4 cut(s) | 2, 128, 1207, 1523 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 587 |
| BsmFI | GGGAC | 4 cut(s) | 2, 128, 1207, 1523 |
| BsnI | GGCC | 2 cut(s) | 194, 1712 |
| Bsp1286I | GDGCHC | 1 cut(s) | 915 |
| Bsp13I | TCCGGA | 2 cut(s) | 891, 1753 |
| Bsp143I | GATC | 4 cut(s) | 614, 772, 1617, 1845 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1101 |
| BspACI | CCGC | 4 cut(s) | 219, 395, 508, 647 |
| BspANI | GGCC | 2 cut(s) | 194, 1712 |
| BspCNI | CTCAG | 1 cut(s) | 1093 |
| BspEI | TCCGGA | 2 cut(s) | 891, 1753 |
| BspFNI | CGCG | 2 cut(s) | 510, 643 |
| BspLI | GGNNCC | 5 cut(s) | 116, 616, 1052, 1619, 1711 |
| BspMAI | CTGCAG | 1 cut(s) | 1480 |
| BspMI | ACCTGC | 2 cut(s) | 365, 727 |
| BspPI | GGATC | 4 cut(s) | 609, 622, 1612, 1625 |
| BspQI | GCTCTTC | 1 cut(s) | 1591 |
| BsrDI | GCAATG | 3 cut(s) | 591, 1017, 1416 |
| BsrI | ACTGG | 3 cut(s) | 74, 609, 831 |
| BssECI | CCNNGG | 1 cut(s) | 189 |
| BssMI | GATC | 4 cut(s) | 614, 772, 1617, 1845 |
| BssNAI | GTATAC | 1 cut(s) | 707 |
| Bst1107I | GTATAC | 1 cut(s) | 707 |
| Bst2UI | CCWGG | 2 cut(s) | 190, 1494 |
| Bst4CI | ACNGT | 5 cut(s) | 13, 704, 1084, 1372, 1489 |
| Bst6I | CTCTTC | 4 cut(s) | 759, 933, 989, 1591 |
| BstBAI | YACGTR | 1 cut(s) | 1207 |
| BstC8I | GCNNGC | 2 cut(s) | 201, 645 |
| BstDEI | CTNAG | 3 cut(s) | 494, 1101, 1539 |
| BstF5I | GGATG | 4 cut(s) | 232, 481, 1655, 1827 |
| BstFNI | CGCG | 2 cut(s) | 510, 643 |
| BstHHI | GCGC | 2 cut(s) | 512, 1305 |
| BstKTI | GATC | 4 cut(s) | 617, 775, 1620, 1848 |
| BstMBI | GATC | 4 cut(s) | 614, 772, 1617, 1845 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 200, 266, 582, 1445 |
| BstNI | CCWGG | 2 cut(s) | 190, 1494 |
| BstNSI | RCATGY | 4 cut(s) | 813, 919, 1030, 1201 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 14 |
| BstSCI | CCNGG | 2 cut(s) | 188, 1492 |
| BstSFI | CTRYAG | 1 cut(s) | 1476 |
| BstUI | CGCG | 2 cut(s) | 510, 643 |
| BstV1I | GCAGC | 7 cut(s) | 17, 1084, 1188, 1268, 1435, 1462, 1490 |
| BstV2I | GAAGAC | 3 cut(s) | 159, 228, 829 |
| BstX2I | RGATCY | 2 cut(s) | 614, 1617 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 611 |
| BstYI | RGATCY | 2 cut(s) | 614, 1617 |
| BstZ17I | GTATAC | 1 cut(s) | 707 |
| BsuRI | GGCC | 2 cut(s) | 194, 1712 |
| BtsCI | GGATG | 4 cut(s) | 232, 481, 1655, 1827 |
| BtsI | GCAGTG | 1 cut(s) | 1488 |
| BtsIMutI | CAGTG | 4 cut(s) | 67, 250, 616, 1488 |
| BveI | ACCTGC | 2 cut(s) | 365, 727 |
| Cac8I | GCNNGC | 2 cut(s) | 201, 645 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1493 |
| CfoI | GCGC | 2 cut(s) | 512, 1305 |
| Cfr13I | GGNCC | 6 cut(s) | 115, 192, 419, 505, 894, 1710 |
| Csp6I | GTAC | 2 cut(s) | 639, 1787 |
| CviAII | CATG | 8 cut(s) | 810, 887, 916, 1027, 1037, 1198, 1306, 1714 |
| CviQI | GTAC | 2 cut(s) | 639, 1787 |
| DdeI | CTNAG | 3 cut(s) | 494, 1101, 1539 |
| DpnI | GATC | 4 cut(s) | 616, 774, 1619, 1847 |
| DpnII | GATC | 4 cut(s) | 614, 772, 1617, 1845 |
| DraI | TTTAAA | 1 cut(s) | 624 |
| Eam1104I | CTCTTC | 4 cut(s) | 759, 933, 989, 1591 |
| EarI | CTCTTC | 4 cut(s) | 759, 933, 989, 1591 |
| Eco32I | GATATC | 1 cut(s) | 1060 |
| Eco47I | GGWCC | 4 cut(s) | 115, 419, 505, 894 |
| Eco57I | CTGAAG | 4 cut(s) | 123, 354, 412, 1581 |
| Eco72I | CACGTG | 1 cut(s) | 1207 |
| EcoO109I | RGGNCCY | 2 cut(s) | 115, 192 |
| EcoRI | GAATTC | 1 cut(s) | 328 |
| EcoRII | CCWGG | 2 cut(s) | 188, 1492 |
| EcoRV | GATATC | 1 cut(s) | 1060 |
| FaeI | CATG | 8 cut(s) | 813, 890, 919, 1030, 1040, 1201, 1309, 1717 |
| FaqI | GGGAC | 4 cut(s) | 2, 128, 1207, 1523 |
| FatI | CATG | 8 cut(s) | 809, 886, 915, 1026, 1036, 1197, 1305, 1713 |
| FauI | CCCGC | 2 cut(s) | 212, 640 |
| FblI | GTMKAC | 2 cut(s) | 706, 1033 |
| Fnu4HI | GCNGC | 7 cut(s) | 6, 1098, 1202, 1257, 1449, 1476, 1479 |
| FokI | GGATG | 4 cut(s) | 239, 468, 1642, 1834 |
| Fsp4HI | GCNGC | 7 cut(s) | 6, 1098, 1202, 1257, 1449, 1476, 1479 |
| FspBI | CTAG | 4 cut(s) | 21, 636, 908, 1794 |
| GlaI | GCGC | 2 cut(s) | 511, 1304 |
| GluI | GCNGC | 7 cut(s) | 6, 1098, 1202, 1257, 1449, 1476, 1479 |
| GsuI | CTGGAG | 1 cut(s) | 91 |
| HaeIII | GGCC | 2 cut(s) | 194, 1712 |
| HapII | CCGG | 2 cut(s) | 892, 1754 |
| HhaI | GCGC | 2 cut(s) | 512, 1305 |
| Hin1II | CATG | 8 cut(s) | 813, 890, 919, 1030, 1040, 1201, 1309, 1717 |
| Hin6I | GCGC | 2 cut(s) | 510, 1303 |
| HinP1I | GCGC | 2 cut(s) | 510, 1303 |
| HindIII | AAGCTT | 1 cut(s) | 583 |
| HinfI | GANTC | 5 cut(s) | 233, 380, 855, 943, 1866 |
| HpaII | CCGG | 2 cut(s) | 892, 1754 |
| HphI | GGTGA | 6 cut(s) | 94, 199, 242, 383, 836, 1402 |
| Hpy166II | GTNNAC | 4 cut(s) | 707, 1034, 1375, 1499 |
| Hpy188I | TCNGA | 9 cut(s) | 322, 334, 385, 759, 786, 801, 1046, 1342, 1871 |
| Hpy188III | TCNNGA | 9 cut(s) | 253, 302, 485, 852, 892, 908, 1112, 1291, 1754 |
| Hpy8I | GTNNAC | 4 cut(s) | 707, 1034, 1375, 1499 |
| HpyAV | CCTTC | 6 cut(s) | 119, 806, 927, 1041, 1288, 1387 |
| HpyCH4III | ACNGT | 5 cut(s) | 13, 704, 1084, 1372, 1489 |
| HpyCH4IV | ACGT | 6 cut(s) | 544, 1013, 1139, 1206, 1569, 1630 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 200, 266, 582, 1445 |
| HpyF3I | CTNAG | 3 cut(s) | 494, 1101, 1539 |
| HpySE526I | ACGT | 6 cut(s) | 544, 1013, 1139, 1206, 1569, 1630 |
| Hsp92II | CATG | 8 cut(s) | 813, 890, 919, 1030, 1040, 1201, 1309, 1717 |
| HspAI | GCGC | 2 cut(s) | 510, 1303 |
| Kpn2I | TCCGGA | 2 cut(s) | 891, 1753 |
| Kzo9I | GATC | 4 cut(s) | 614, 772, 1617, 1845 |
| LguI | GCTCTTC | 1 cut(s) | 1591 |
| LmnI | GCTCC | 3 cut(s) | 72, 888, 1300 |
| Lsp1109I | GCAGC | 7 cut(s) | 17, 1084, 1188, 1268, 1435, 1462, 1490 |
| LweI | GCATC | 5 cut(s) | 256, 258, 364, 1114, 1812 |
| MaeI | CTAG | 4 cut(s) | 21, 636, 908, 1794 |
| MaeII | ACGT | 6 cut(s) | 544, 1013, 1139, 1206, 1569, 1630 |
| MaeIII | GTNAC | 3 cut(s) | 440, 805, 1483 |
| MalI | GATC | 4 cut(s) | 616, 774, 1619, 1847 |
| MboI | GATC | 4 cut(s) | 614, 772, 1617, 1845 |
| MfeI | CAATTG | 1 cut(s) | 1803 |
| MflI | RGATCY | 2 cut(s) | 614, 1617 |
| MhlI | GDGCHC | 1 cut(s) | 915 |
| MluI | ACGCGT | 1 cut(s) | 641 |
| MlyI | GAGTC | 2 cut(s) | 242, 374 |
| MmeI | TCCRAC | 1 cut(s) | 540 |
| MroI | TCCGGA | 2 cut(s) | 891, 1753 |
| MroXI | GAANNNNTTC | 1 cut(s) | 396 |
| MseI | TTAA | 9 cut(s) | 26, 33, 39, 48, 474, 623, 929, 1326, 1503 |
| MslI | CAYNNNNRTG | 3 cut(s) | 609, 918, 1816 |
| MspI | CCGG | 2 cut(s) | 892, 1754 |
| MspR9I | CCNGG | 2 cut(s) | 190, 1494 |
| MunI | CAATTG | 1 cut(s) | 1803 |
| MvaI | CCWGG | 2 cut(s) | 190, 1494 |
| MvnI | CGCG | 2 cut(s) | 510, 643 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 200, 266, 582, 1445 |
| NdeII | GATC | 4 cut(s) | 614, 772, 1617, 1845 |
| NlaIII | CATG | 8 cut(s) | 813, 890, 919, 1030, 1040, 1201, 1309, 1717 |
| NlaIV | GGNNCC | 5 cut(s) | 116, 616, 1052, 1619, 1711 |
| NmuCI | GTSAC | 2 cut(s) | 440, 1483 |
| NspI | RCATGY | 4 cut(s) | 813, 919, 1030, 1201 |
| OliI | CACNNNNGTG | 1 cut(s) | 918 |
| PaqCI | CACCTGC | 2 cut(s) | 365, 727 |
| PciI | ACATGT | 2 cut(s) | 809, 915 |
| PciSI | GCTCTTC | 1 cut(s) | 1591 |
| PdmI | GAANNNNTTC | 1 cut(s) | 396 |
| PfeI | GAWTC | 3 cut(s) | 855, 943, 1866 |
| PflFI | GACNNNGTC | 1 cut(s) | 119 |
| PkrI | GCNGC | 7 cut(s) | 7, 1099, 1203, 1258, 1450, 1477, 1480 |
| PleI | GAGTC | 2 cut(s) | 241, 374 |
| PmaCI | CACGTG | 1 cut(s) | 1207 |
| PmlI | CACGTG | 1 cut(s) | 1207 |
| PpsI | GAGTC | 2 cut(s) | 241, 374 |
| Ppu21I | YACGTR | 1 cut(s) | 1207 |
| PpuMI | RGGWCCY | 1 cut(s) | 115 |
| PscI | ACATGT | 2 cut(s) | 809, 915 |
| PshAI | GACNNNNGTC | 1 cut(s) | 14 |
| PshBI | ATTAAT | 1 cut(s) | 1326 |
| PsiI | TTATAA | 1 cut(s) | 699 |
| Psp5II | RGGWCCY | 1 cut(s) | 115 |
| Psp6I | CCWGG | 2 cut(s) | 188, 1492 |
| PspCI | CACGTG | 1 cut(s) | 1207 |
| PspGI | CCWGG | 2 cut(s) | 188, 1492 |
| PspN4I | GGNNCC | 5 cut(s) | 116, 616, 1052, 1619, 1711 |
| PspPI | GGNCC | 6 cut(s) | 115, 192, 419, 505, 894, 1710 |
| PspPPI | RGGWCCY | 1 cut(s) | 115 |
| PstI | CTGCAG | 1 cut(s) | 1480 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1493 |
| PsuI | RGATCY | 2 cut(s) | 614, 1617 |
| PsyI | GACNNNGTC | 1 cut(s) | 119 |
| RsaI | GTAC | 2 cut(s) | 640, 1788 |
| RsaNI | GTAC | 2 cut(s) | 639, 1787 |
| RseI | CAYNNNNRTG | 3 cut(s) | 609, 918, 1816 |
| SapI | GCTCTTC | 1 cut(s) | 1591 |
| SaqAI | TTAA | 9 cut(s) | 26, 33, 39, 48, 474, 623, 929, 1326, 1503 |
| SatI | GCNGC | 7 cut(s) | 6, 1098, 1202, 1257, 1449, 1476, 1479 |
| Sau3AI | GATC | 4 cut(s) | 614, 772, 1617, 1845 |
| Sau96I | GGNCC | 6 cut(s) | 115, 192, 419, 505, 894, 1710 |
| SchI | GAGTC | 2 cut(s) | 242, 374 |
| ScrFI | CCNGG | 2 cut(s) | 190, 1494 |
| SduI | GDGCHC | 1 cut(s) | 915 |
| SfaNI | GCATC | 5 cut(s) | 256, 258, 364, 1114, 1812 |
| SfcI | CTRYAG | 1 cut(s) | 1476 |
| SinI | GGWCC | 4 cut(s) | 115, 419, 505, 894 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 609, 918, 1816 |
| SmlI | CTYRAG | 2 cut(s) | 361, 1316 |
| SmoI | CTYRAG | 2 cut(s) | 361, 1316 |
| SsiI | CCGC | 4 cut(s) | 219, 395, 508, 647 |
| SspMI | CTAG | 4 cut(s) | 21, 636, 908, 1794 |
| StyD4I | CCNGG | 2 cut(s) | 188, 1492 |
| TaaI | ACNGT | 5 cut(s) | 13, 704, 1084, 1372, 1489 |
| TaiI | ACGT | 6 cut(s) | 547, 1016, 1142, 1209, 1572, 1633 |
| TaqI | TCGA | 4 cut(s) | 123, 252, 900, 1249 |
| TfiI | GAWTC | 3 cut(s) | 855, 943, 1866 |
| Tru1I | TTAA | 9 cut(s) | 26, 33, 39, 48, 474, 623, 929, 1326, 1503 |
| Tru9I | TTAA | 9 cut(s) | 26, 33, 39, 48, 474, 623, 929, 1326, 1503 |
| TscAI | CASTG | 4 cut(s) | 74, 250, 616, 1488 |
| TseFI | GTSAC | 2 cut(s) | 440, 1483 |
| TseI | GCWGC | 7 cut(s) | 5, 1097, 1201, 1256, 1448, 1475, 1478 |
| Tsp45I | GTSAC | 2 cut(s) | 440, 1483 |
| TspGWI | ACGGA | 2 cut(s) | 1821, 1878 |
| TspRI | CASTG | 4 cut(s) | 74, 250, 616, 1488 |
| Tth111I | GACNNNGTC | 1 cut(s) | 119 |
| VpaK11BI | GGWCC | 4 cut(s) | 115, 419, 505, 894 |
| VspI | ATTAAT | 1 cut(s) | 1326 |
| XapI | RAATTY | 8 cut(s) | 306, 316, 328, 448, 661, 903, 965, 1336 |
| XbaI | TCTAGA | 1 cut(s) | 907 |
| XceI | RCATGY | 4 cut(s) | 813, 919, 1030, 1201 |
| XmiI | GTMKAC | 2 cut(s) | 706, 1033 |
| XmnI | GAANNNNTTC | 1 cut(s) | 396 |
| XspI | CTAG | 4 cut(s) | 21, 636, 908, 1794 |