protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 362, 403 |
| AfaI | GTAC | 3 cut(s) | 131, 332, 348 |
| AgsI | TTSAA | 5 cut(s) | 47, 152, 220, 367, 422 |
| AluBI | AGCT | 3 cut(s) | 41, 64, 280 |
| AluI | AGCT | 3 cut(s) | 41, 64, 280 |
| Alw21I | GWGCWC | 1 cut(s) | 66 |
| Ama87I | CYCGRG | 1 cut(s) | 377 |
| ApeKI | GCWGC | 1 cut(s) | 299 |
| ApoI | RAATTY | 2 cut(s) | 362, 403 |
| AsuC2I | CCSGG | 1 cut(s) | 232 |
| AvaI | CYCGRG | 1 cut(s) | 377 |
| BanII | GRGCYC | 1 cut(s) | 66 |
| Bbv12I | GWGCWC | 1 cut(s) | 66 |
| BbvI | GCAGC | 1 cut(s) | 311 |
| BccI | CCATC | 1 cut(s) | 278 |
| BceAI | ACGGC | 1 cut(s) | 141 |
| BcnI | CCSGG | 1 cut(s) | 232 |
| BisI | GCNGC | 1 cut(s) | 300 |
| BlsI | GCNGC | 1 cut(s) | 301 |
| BmcAI | AGTACT | 1 cut(s) | 348 |
| Bme1390I | CCNGG | 1 cut(s) | 232 |
| BmeT110I | CYCGRG | 1 cut(s) | 377 |
| BmrFI | CCNGG | 1 cut(s) | 232 |
| BpuMI | CCSGG | 1 cut(s) | 232 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 250, 280 |
| Bse1I | ACTGG | 1 cut(s) | 196 |
| Bse3DI | GCAATG | 1 cut(s) | 332 |
| BseMI | GCAATG | 1 cut(s) | 332 |
| BseNI | ACTGG | 1 cut(s) | 196 |
| BseXI | GCAGC | 1 cut(s) | 311 |
| BsgI | GTGCAG | 1 cut(s) | 318 |
| BsiHKAI | GWGCWC | 1 cut(s) | 66 |
| BsiHKCI | CYCGRG | 1 cut(s) | 377 |
| BsiSI | CCGG | 1 cut(s) | 231 |
| BslFI | GGGAC | 3 cut(s) | 202, 271, 373 |
| BsmFI | GGGAC | 3 cut(s) | 202, 271, 373 |
| BsmI | GAATGC | 1 cut(s) | 158 |
| BsoBI | CYCGRG | 1 cut(s) | 377 |
| Bsp1286I | GDGCHC | 1 cut(s) | 66 |
| BsrDI | GCAATG | 1 cut(s) | 332 |
| BsrI | ACTGG | 1 cut(s) | 196 |
| Bst4CI | ACNGT | 1 cut(s) | 31 |
| BstC8I | GCNNGC | 1 cut(s) | 242 |
| BstNSI | RCATGY | 1 cut(s) | 244 |
| BstSCI | CCNGG | 1 cut(s) | 230 |
| BstV1I | GCAGC | 1 cut(s) | 311 |
| Cac8I | GCNNGC | 1 cut(s) | 242 |
| Csp6I | GTAC | 3 cut(s) | 130, 331, 347 |
| CviAII | CATG | 5 cut(s) | 14, 106, 143, 241, 385 |
| CviJI | RGCY | 6 cut(s) | 41, 64, 86, 177, 280, 302 |
| CviKI_1 | RGCY | 6 cut(s) | 41, 64, 86, 177, 280, 302 |
| CviQI | GTAC | 3 cut(s) | 130, 331, 347 |
| Ecl136II | GAGCTC | 1 cut(s) | 64 |
| Eco24I | GRGCYC | 1 cut(s) | 66 |
| Eco53kI | GAGCTC | 1 cut(s) | 64 |
| Eco88I | CYCGRG | 1 cut(s) | 377 |
| EcoICRI | GAGCTC | 1 cut(s) | 64 |
| EcoT38I | GRGCYC | 1 cut(s) | 66 |
| FaeI | CATG | 5 cut(s) | 17, 109, 146, 244, 388 |
| FaqI | GGGAC | 3 cut(s) | 202, 271, 373 |
| FatI | CATG | 5 cut(s) | 13, 105, 142, 240, 384 |
| Fnu4HI | GCNGC | 1 cut(s) | 300 |
| FriOI | GRGCYC | 1 cut(s) | 66 |
| Fsp4HI | GCNGC | 1 cut(s) | 300 |
| GluI | GCNGC | 1 cut(s) | 300 |
| HapII | CCGG | 1 cut(s) | 231 |
| Hin1II | CATG | 5 cut(s) | 17, 109, 146, 244, 388 |
| HindIII | AAGCTT | 1 cut(s) | 278 |
| HinfI | GANTC | 1 cut(s) | 227 |
| HpaII | CCGG | 1 cut(s) | 231 |
| Hpy188I | TCNGA | 1 cut(s) | 344 |
| Hpy188III | TCNNGA | 1 cut(s) | 161 |
| HpyCH4III | ACNGT | 1 cut(s) | 31 |
| HpyCH4IV | ACGT | 1 cut(s) | 260 |
| HpyCH4V | TGCA | 5 cut(s) | 81, 254, 299, 307, 313 |
| HpySE526I | ACGT | 1 cut(s) | 260 |
| Hsp92II | CATG | 5 cut(s) | 17, 109, 146, 244, 388 |
| LpnPI | CCDG | 6 cut(s) | 100, 105, 177, 240, 244, 279 |
| Lsp1109I | GCAGC | 1 cut(s) | 311 |
| MaeII | ACGT | 1 cut(s) | 260 |
| MboII | GAAGA | 1 cut(s) | 129 |
| MhlI | GDGCHC | 1 cut(s) | 66 |
| MluCI | AATT | 3 cut(s) | 110, 362, 403 |
| MnlI | CCTC | 2 cut(s) | 365, 401 |
| MspI | CCGG | 1 cut(s) | 231 |
| MspR9I | CCNGG | 1 cut(s) | 232 |
| Mva1269I | GAATGC | 1 cut(s) | 158 |
| NciI | CCSGG | 1 cut(s) | 232 |
| NlaIII | CATG | 5 cut(s) | 17, 109, 146, 244, 388 |
| NspI | RCATGY | 1 cut(s) | 244 |
| PaeI | GCATGC | 1 cut(s) | 244 |
| PctI | GAATGC | 1 cut(s) | 158 |
| PfeI | GAWTC | 1 cut(s) | 227 |
| PfoI | TCCNGGA | 1 cut(s) | 230 |
| PkrI | GCNGC | 1 cut(s) | 301 |
| Psp124BI | GAGCTC | 1 cut(s) | 66 |
| RsaI | GTAC | 3 cut(s) | 131, 332, 348 |
| RsaNI | GTAC | 3 cut(s) | 130, 331, 347 |
| SacI | GAGCTC | 1 cut(s) | 66 |
| SatI | GCNGC | 1 cut(s) | 300 |
| ScaI | AGTACT | 1 cut(s) | 348 |
| ScrFI | CCNGG | 1 cut(s) | 232 |
| SduI | GDGCHC | 1 cut(s) | 66 |
| SetI | ASST | 7 cut(s) | 43, 66, 210, 263, 282, 298, 357 |
| SphI | GCATGC | 1 cut(s) | 244 |
| Sse9I | AATT | 3 cut(s) | 110, 362, 403 |
| SstI | GAGCTC | 1 cut(s) | 66 |
| StyD4I | CCNGG | 1 cut(s) | 230 |
| TaaI | ACNGT | 1 cut(s) | 31 |
| TaiI | ACGT | 1 cut(s) | 263 |
| TasI | AATT | 3 cut(s) | 110, 362, 403 |
| TatI | WGTACW | 2 cut(s) | 129, 346 |
| TfiI | GAWTC | 1 cut(s) | 227 |
| TseI | GCWGC | 1 cut(s) | 299 |
| TspDTI | ATGAA | 3 cut(s) | 122, 128, 373 |
| TspGWI | ACGGA | 1 cut(s) | 138 |
| XapI | RAATTY | 2 cut(s) | 362, 403 |
| XceI | RCATGY | 1 cut(s) | 244 |
| ZrmI | AGTACT | 1 cut(s) | 348 |