Domain of unknown function
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF4219 | PF13961 | 36 - 62 | 1.5e-08 | Domain of unknown function (DUF4219) |
| Retrotran_gag_2 | PF14223 | 49 - 118 | 1.8e-09 | gag-polypeptide of LTR copia-type |
| Ank_2 | PF12796 | 141 - 231 | 1.7e-06 | Ankyrin repeats (3 copies) |
| PGG | PF13962 | 557 - 617 | 5e-15 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 717, 849 |
| AatII | GACGTC | 1 cut(s) | 1861 |
| Acc36I | ACCTGC | 1 cut(s) | 208 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1073 |
| AccI | GTMKAC | 1 cut(s) | 1269 |
| AccIII | TCCGGA | 1 cut(s) | 373 |
| AciI | CCGC | 6 cut(s) | 56, 276, 641, 794, 1028, 1742 |
| AclI | AACGTT | 1 cut(s) | 1281 |
| AclWI | GGATC | 4 cut(s) | 982, 1010, 1066, 1153 |
| AcoI | YGGCCR | 3 cut(s) | 315, 663, 1194 |
| AcsI | RAATTY | 2 cut(s) | 857, 1600 |
| AcuI | CTGAAG | 3 cut(s) | 36, 183, 385 |
| AcvI | CACGTG | 1 cut(s) | 1625 |
| AcyI | GRCGYC | 2 cut(s) | 1236, 1858 |
| AdeI | CACNNNGTG | 1 cut(s) | 1625 |
| AfaI | GTAC | 5 cut(s) | 414, 552, 1086, 1702, 1707 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 509, 922, 1073, 1192 |
| AflII | CTTAAG | 1 cut(s) | 5 |
| AgsI | TTSAA | 6 cut(s) | 40, 118, 352, 937, 1097, 1555 |
| AhlI | ACTAGT | 1 cut(s) | 361 |
| AjnI | CCWGG | 3 cut(s) | 67, 326, 1756 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 64, 96 |
| AluBI | AGCT | 8 cut(s) | 10, 521, 898, 902, 1156, 1265, 1523, 1543 |
| AluI | AGCT | 8 cut(s) | 10, 521, 898, 902, 1156, 1265, 1523, 1543 |
| Alw21I | GWGCWC | 3 cut(s) | 53, 1334, 1717 |
| Alw26I | GTCTC | 3 cut(s) | 973, 1414, 1491 |
| AlwI | GGATC | 4 cut(s) | 982, 1010, 1066, 1153 |
| Aor13HI | TCCGGA | 1 cut(s) | 373 |
| AoxI | GGCC | 5 cut(s) | 31, 315, 663, 1194, 1584 |
| ApeKI | GCWGC | 6 cut(s) | 341, 824, 1465, 1475, 1520, 1739 |
| ApoI | RAATTY | 2 cut(s) | 857, 1600 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1569 |
| AspS9I | GGNCC | 3 cut(s) | 945, 1350, 1585 |
| AsuC2I | CCSGG | 1 cut(s) | 1515 |
| AsuHPI | GGTGA | 3 cut(s) | 452, 719, 881 |
| AsuNHI | GCTAGC | 1 cut(s) | 898 |
| AvaII | GGWCC | 2 cut(s) | 945, 1350 |
| BalI | TGGCCA | 1 cut(s) | 665 |
| BbrPI | CACGTG | 1 cut(s) | 1625 |
| BbsI | GAAGAC | 2 cut(s) | 128, 402 |
| Bbv12I | GWGCWC | 3 cut(s) | 53, 1334, 1717 |
| BbvI | GCAGC | 6 cut(s) | 353, 811, 1452, 1462, 1532, 1726 |
| BccI | CCATC | 5 cut(s) | 608, 894, 993, 1194, 1474 |
| BceAI | ACGGC | 4 cut(s) | 69, 330, 1209, 1514 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 235, 269 |
| BciT130I | CCWGG | 3 cut(s) | 69, 328, 1758 |
| BciVI | GTATCC | 1 cut(s) | 532 |
| BclI | TGATCA | 1 cut(s) | 1203 |
| BcnI | CCSGG | 1 cut(s) | 1515 |
| BcoDI | GTCTC | 3 cut(s) | 973, 1414, 1491 |
| BcuI | ACTAGT | 1 cut(s) | 361 |
| BfaI | CTAG | 3 cut(s) | 362, 899, 1118 |
| BfmI | CTRYAG | 2 cut(s) | 27, 1393 |
| BfrI | CTTAAG | 1 cut(s) | 5 |
| BfuAI | ACCTGC | 1 cut(s) | 208 |
| BfuI | GTATCC | 1 cut(s) | 532 |
| BisI | GCNGC | 9 cut(s) | 57, 342, 825, 1028, 1466, 1476, 1521, 1740, 1743 |
| BlsI | GCNGC | 9 cut(s) | 58, 343, 826, 1029, 1467, 1477, 1522, 1741, 1744 |
| Bme1390I | CCNGG | 4 cut(s) | 69, 328, 1515, 1758 |
| Bme18I | GGWCC | 2 cut(s) | 945, 1350 |
| BmgT120I | GGNCC | 3 cut(s) | 945, 1350, 1585 |
| BmiI | GGNNCC | 2 cut(s) | 1132, 1352 |
| BmrFI | CCNGG | 4 cut(s) | 69, 328, 1515, 1758 |
| BmrI | ACTGGG | 1 cut(s) | 1718 |
| BmsI | GCATC | 7 cut(s) | 322, 415, 570, 659, 700, 1207, 1822 |
| BmtI | GCTAGC | 1 cut(s) | 902 |
| BmuI | ACTGGG | 1 cut(s) | 1718 |
| BpiI | GAAGAC | 2 cut(s) | 128, 402 |
| BpuMI | CCSGG | 1 cut(s) | 1515 |
| BsaAI | YACGTR | 1 cut(s) | 1625 |
| BsaHI | GRCGYC | 2 cut(s) | 1236, 1858 |
| BsaJI | CCNNGG | 5 cut(s) | 327, 1239, 1273, 1514, 1577 |
| BsaWI | WCCGGW | 1 cut(s) | 373 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 64, 94 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 509, 922, 1073, 1192 |
| Bse1I | ACTGG | 4 cut(s) | 728, 948, 1107, 1713 |
| Bse3DI | GCAATG | 3 cut(s) | 528, 823, 1427 |
| BseAI | TCCGGA | 1 cut(s) | 373 |
| BseBI | CCWGG | 3 cut(s) | 69, 328, 1758 |
| BseDI | CCNNGG | 5 cut(s) | 327, 1239, 1273, 1514, 1577 |
| BseGI | GGATG | 4 cut(s) | 181, 337, 649, 1683 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 509, 922, 1073, 1192 |
| BseMI | GCAATG | 3 cut(s) | 528, 823, 1427 |
| BseMII | CTCAG | 2 cut(s) | 450, 999 |
| BseNI | ACTGG | 4 cut(s) | 728, 948, 1107, 1713 |
| BseRI | GAGGAG | 1 cut(s) | 448 |
| BseXI | GCAGC | 6 cut(s) | 353, 811, 1452, 1462, 1532, 1726 |
| Bsh1285I | CGRYCG | 1 cut(s) | 587 |
| BshFI | GGCC | 5 cut(s) | 33, 317, 665, 1196, 1586 |
| BsiEI | CGRYCG | 1 cut(s) | 587 |
| BsiHKAI | GWGCWC | 3 cut(s) | 53, 1334, 1717 |
| BsiSI | CCGG | 2 cut(s) | 374, 1514 |
| BslFI | GGGAC | 1 cut(s) | 773 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 509, 922, 1073, 1192 |
| BsmAI | GTCTC | 3 cut(s) | 973, 1414, 1491 |
| BsmFI | GGGAC | 1 cut(s) | 773 |
| BsnI | GGCC | 5 cut(s) | 33, 317, 665, 1196, 1586 |
| Bsp1286I | GDGCHC | 3 cut(s) | 53, 1334, 1717 |
| Bsp13I | TCCGGA | 1 cut(s) | 373 |
| Bsp1407I | TGTACA | 1 cut(s) | 1084 |
| Bsp143I | GATC | 8 cut(s) | 584, 974, 1002, 1058, 1069, 1158, 1203, 1609 |
| BspACI | CCGC | 6 cut(s) | 56, 276, 641, 794, 1028, 1742 |
| BspANI | GGCC | 5 cut(s) | 33, 317, 665, 1196, 1586 |
| BspCNI | CTCAG | 2 cut(s) | 451, 998 |
| BspEI | TCCGGA | 1 cut(s) | 373 |
| BspLI | GGNNCC | 2 cut(s) | 1132, 1352 |
| BspMAI | CTGCAG | 1 cut(s) | 31 |
| BspMI | ACCTGC | 1 cut(s) | 208 |
| BspOI | GCTAGC | 1 cut(s) | 902 |
| BspPI | GGATC | 4 cut(s) | 982, 1010, 1066, 1153 |
| BspQI | GCTCTTC | 1 cut(s) | 528 |
| BspTI | CTTAAG | 1 cut(s) | 5 |
| BsrDI | GCAATG | 3 cut(s) | 528, 823, 1427 |
| BsrGI | TGTACA | 1 cut(s) | 1084 |
| BsrI | ACTGG | 4 cut(s) | 728, 948, 1107, 1713 |
| BssECI | CCNNGG | 5 cut(s) | 327, 1239, 1273, 1514, 1577 |
| BssMI | GATC | 8 cut(s) | 584, 974, 1002, 1058, 1069, 1158, 1203, 1609 |
| BssNI | GRCGYC | 2 cut(s) | 1236, 1858 |
| BssT1I | CCWWGG | 3 cut(s) | 1239, 1273, 1577 |
| Bst2UI | CCWGG | 3 cut(s) | 69, 328, 1758 |
| Bst4CI | ACNGT | 4 cut(s) | 76, 1632, 1705, 1753 |
| Bst6I | CTCTTC | 2 cut(s) | 528, 1335 |
| BstACI | GRCGYC | 2 cut(s) | 1236, 1858 |
| BstAFI | CTTAAG | 1 cut(s) | 5 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 491, 580 |
| BstAUI | TGTACA | 1 cut(s) | 1084 |
| BstBAI | YACGTR | 1 cut(s) | 1625 |
| BstC8I | GCNNGC | 4 cut(s) | 31, 190, 258, 900 |
| BstDEI | CTNAG | 3 cut(s) | 459, 985, 1638 |
| BstF5I | GGATG | 4 cut(s) | 181, 337, 649, 1683 |
| BstKTI | GATC | 8 cut(s) | 587, 977, 1005, 1061, 1072, 1161, 1206, 1612 |
| BstMAI | GTCTC | 3 cut(s) | 973, 1414, 1491 |
| BstMBI | GATC | 8 cut(s) | 584, 974, 1002, 1058, 1069, 1158, 1203, 1609 |
| BstMCI | CGRYCG | 1 cut(s) | 587 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 257, 323, 332, 341, 491, 580, 638, 678, 1540 |
| BstNI | CCWGG | 3 cut(s) | 69, 328, 1758 |
| BstNSI | RCATGY | 1 cut(s) | 1427 |
| BstSCI | CCNGG | 4 cut(s) | 67, 326, 1513, 1756 |
| BstSFI | CTRYAG | 2 cut(s) | 27, 1393 |
| BstV1I | GCAGC | 6 cut(s) | 353, 811, 1452, 1462, 1532, 1726 |
| BstV2I | GAAGAC | 2 cut(s) | 128, 402 |
| BstX2I | RGATCY | 1 cut(s) | 1002 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 673 |
| BstYI | RGATCY | 1 cut(s) | 1002 |
| BsuI | GTATCC | 1 cut(s) | 532 |
| BsuRI | GGCC | 5 cut(s) | 33, 317, 665, 1196, 1586 |
| BtgZI | GCGATG | 2 cut(s) | 1012, 1493 |
| BtsCI | GGATG | 4 cut(s) | 181, 337, 649, 1683 |
| BtsI | GCAGTG | 3 cut(s) | 24, 540, 573 |
| BtsIMutI | CAGTG | 6 cut(s) | 24, 409, 540, 573, 955, 1332 |
| BveI | ACCTGC | 1 cut(s) | 208 |
| Cac8I | GCNNGC | 4 cut(s) | 31, 190, 258, 900 |
| Cfr13I | GGNCC | 3 cut(s) | 945, 1350, 1585 |
| CseI | GACGC | 2 cut(s) | 1019, 1244 |
| Csp6I | GTAC | 5 cut(s) | 413, 551, 1085, 1701, 1706 |
| CviAII | CATG | 7 cut(s) | 870, 942, 1031, 1073, 1163, 1324, 1424 |
| CviQI | GTAC | 5 cut(s) | 413, 551, 1085, 1701, 1706 |
| DdeI | CTNAG | 3 cut(s) | 459, 985, 1638 |
| DpnI | GATC | 8 cut(s) | 586, 976, 1004, 1060, 1071, 1160, 1205, 1611 |
| DpnII | GATC | 8 cut(s) | 584, 974, 1002, 1058, 1069, 1158, 1203, 1609 |
| DraI | TTTAAA | 1 cut(s) | 1494 |
| DraIII | CACNNNGTG | 1 cut(s) | 1625 |
| EaeI | YGGCCR | 3 cut(s) | 315, 663, 1194 |
| Eam1104I | CTCTTC | 2 cut(s) | 528, 1335 |
| EarI | CTCTTC | 2 cut(s) | 528, 1335 |
| Eco130I | CCWWGG | 3 cut(s) | 1239, 1273, 1577 |
| Eco32I | GATATC | 1 cut(s) | 22 |
| Eco47I | GGWCC | 2 cut(s) | 945, 1350 |
| Eco57I | CTGAAG | 3 cut(s) | 36, 183, 385 |
| Eco72I | CACGTG | 1 cut(s) | 1625 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1350 |
| EcoRII | CCWGG | 3 cut(s) | 67, 326, 1756 |
| EcoRV | GATATC | 1 cut(s) | 22 |
| EcoT14I | CCWWGG | 3 cut(s) | 1239, 1273, 1577 |
| EcoT22I | ATGCAT | 2 cut(s) | 1053, 1429 |
| ErhI | CCWWGG | 3 cut(s) | 1239, 1273, 1577 |
| FaeI | CATG | 7 cut(s) | 873, 945, 1034, 1076, 1166, 1327, 1427 |
| FaqI | GGGAC | 1 cut(s) | 773 |
| FatI | CATG | 7 cut(s) | 869, 941, 1030, 1072, 1162, 1323, 1423 |
| FauI | CCCGC | 1 cut(s) | 269 |
| FauNDI | CATATG | 4 cut(s) | 1047, 1053, 1470, 1614 |
| FbaI | TGATCA | 1 cut(s) | 1203 |
| FblI | GTMKAC | 1 cut(s) | 1269 |
| Fnu4HI | GCNGC | 9 cut(s) | 57, 342, 825, 1028, 1466, 1476, 1521, 1740, 1743 |
| FokI | GGATG | 4 cut(s) | 188, 344, 656, 1690 |
| Fsp4HI | GCNGC | 9 cut(s) | 57, 342, 825, 1028, 1466, 1476, 1521, 1740, 1743 |
| FspBI | CTAG | 3 cut(s) | 362, 899, 1118 |
| GluI | GCNGC | 9 cut(s) | 57, 342, 825, 1028, 1466, 1476, 1521, 1740, 1743 |
| HaeIII | GGCC | 5 cut(s) | 33, 317, 665, 1196, 1586 |
| HapII | CCGG | 2 cut(s) | 374, 1514 |
| HgaI | GACGC | 2 cut(s) | 1019, 1244 |
| Hin1I | GRCGYC | 2 cut(s) | 1236, 1858 |
| Hin1II | CATG | 7 cut(s) | 873, 945, 1034, 1076, 1166, 1327, 1427 |
| HincII | GTYRAC | 2 cut(s) | 367, 1270 |
| HindII | GTYRAC | 2 cut(s) | 367, 1270 |
| HindIII | AAGCTT | 1 cut(s) | 8 |
| HinfI | GANTC | 9 cut(s) | 114, 133, 141, 651, 926, 981, 1312, 1385, 1410 |
| HpaII | CCGG | 2 cut(s) | 374, 1514 |
| HphI | GGTGA | 3 cut(s) | 452, 719, 881 |
| Hpy166II | GTNNAC | 5 cut(s) | 367, 1085, 1270, 1628, 1635 |
| Hpy188I | TCNGA | 5 cut(s) | 16, 267, 283, 589, 1831 |
| Hpy188III | TCNNGA | 7 cut(s) | 98, 374, 969, 978, 1067, 1128, 1316 |
| Hpy8I | GTNNAC | 5 cut(s) | 367, 1085, 1270, 1628, 1635 |
| Hpy99I | CGWCG | 1 cut(s) | 1860 |
| HpyAV | CCTTC | 6 cut(s) | 241, 380, 931, 1576, 1654, 1675 |
| HpyCH4III | ACNGT | 4 cut(s) | 76, 1632, 1705, 1753 |
| HpyCH4IV | ACGT | 4 cut(s) | 549, 1281, 1624, 1858 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 257, 323, 332, 341, 491, 580, 638, 678, 1540 |
| HpyF3I | CTNAG | 3 cut(s) | 459, 985, 1638 |
| HpySE526I | ACGT | 4 cut(s) | 549, 1281, 1624, 1858 |
| Hsp92I | GRCGYC | 2 cut(s) | 1236, 1858 |
| Hsp92II | CATG | 7 cut(s) | 873, 945, 1034, 1076, 1166, 1327, 1427 |
| Kpn2I | TCCGGA | 1 cut(s) | 373 |
| Ksp22I | TGATCA | 1 cut(s) | 1203 |
| Kzo9I | GATC | 8 cut(s) | 584, 974, 1002, 1058, 1069, 1158, 1203, 1609 |
| LguI | GCTCTTC | 1 cut(s) | 528 |
| LmnI | GCTCC | 2 cut(s) | 1329, 1540 |
| Lsp1109I | GCAGC | 6 cut(s) | 353, 811, 1452, 1462, 1532, 1726 |
| LweI | GCATC | 7 cut(s) | 322, 415, 570, 659, 700, 1207, 1822 |
| MaeI | CTAG | 3 cut(s) | 362, 899, 1118 |
| MaeII | ACGT | 4 cut(s) | 549, 1281, 1624, 1858 |
| MaeIII | GTNAC | 3 cut(s) | 545, 784, 1859 |
| MalI | GATC | 8 cut(s) | 586, 976, 1004, 1060, 1071, 1160, 1205, 1611 |
| MboI | GATC | 8 cut(s) | 584, 974, 1002, 1058, 1069, 1158, 1203, 1609 |
| MboII | GAAGA | 9 cut(s) | 29, 128, 176, 247, 407, 412, 515, 1249, 1352 |
| MflI | RGATCY | 1 cut(s) | 1002 |
| MhlI | GDGCHC | 3 cut(s) | 53, 1334, 1717 |
| MlsI | TGGCCA | 1 cut(s) | 665 |
| MluCI | AATT | 8 cut(s) | 261, 555, 857, 963, 1368, 1459, 1600, 1652 |
| MluNI | TGGCCA | 1 cut(s) | 665 |
| MlyI | GAGTC | 4 cut(s) | 142, 150, 975, 1404 |
| MmeI | TCCRAC | 1 cut(s) | 628 |
| Mox20I | TGGCCA | 1 cut(s) | 665 |
| Mph1103I | ATGCAT | 2 cut(s) | 1053, 1429 |
| MroI | TCCGGA | 1 cut(s) | 373 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1569 |
| MscI | TGGCCA | 1 cut(s) | 665 |
| MseI | TTAA | 7 cut(s) | 6, 488, 882, 1371, 1493, 1503, 1595 |
| MslI | CAYNNNNRTG | 2 cut(s) | 533, 659 |
| Msp20I | TGGCCA | 1 cut(s) | 665 |
| MspCI | CTTAAG | 1 cut(s) | 5 |
| MspI | CCGG | 2 cut(s) | 374, 1514 |
| MspR9I | CCNGG | 4 cut(s) | 69, 328, 1515, 1758 |
| MvaI | CCWGG | 3 cut(s) | 69, 328, 1758 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 257, 323, 332, 341, 491, 580, 638, 678, 1540 |
| NciI | CCSGG | 1 cut(s) | 1515 |
| NdeI | CATATG | 4 cut(s) | 1047, 1053, 1470, 1614 |
| NdeII | GATC | 8 cut(s) | 584, 974, 1002, 1058, 1069, 1158, 1203, 1609 |
| NheI | GCTAGC | 1 cut(s) | 898 |
| NlaIII | CATG | 7 cut(s) | 873, 945, 1034, 1076, 1166, 1327, 1427 |
| NlaIV | GGNNCC | 2 cut(s) | 1132, 1352 |
| NmuCI | GTSAC | 2 cut(s) | 545, 1859 |
| NsiI | ATGCAT | 2 cut(s) | 1053, 1429 |
| NspI | RCATGY | 1 cut(s) | 1427 |
| PciSI | GCTCTTC | 1 cut(s) | 528 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 974 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1569 |
| PfeI | GAWTC | 5 cut(s) | 114, 651, 926, 1312, 1385 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1073 |
| PfoI | TCCNGGA | 1 cut(s) | 67 |
| PkrI | GCNGC | 9 cut(s) | 58, 343, 826, 1029, 1467, 1477, 1522, 1741, 1744 |
| Ple19I | CGATCG | 1 cut(s) | 587 |
| PleI | GAGTC | 4 cut(s) | 141, 149, 975, 1404 |
| PmaCI | CACGTG | 1 cut(s) | 1625 |
| PmlI | CACGTG | 1 cut(s) | 1625 |
| PpsI | GAGTC | 4 cut(s) | 141, 149, 975, 1404 |
| Ppu21I | YACGTR | 1 cut(s) | 1625 |
| PpuMI | RGGWCCY | 1 cut(s) | 1350 |
| PsiI | TTATAA | 2 cut(s) | 717, 849 |
| Psp1406I | AACGTT | 1 cut(s) | 1281 |
| Psp5II | RGGWCCY | 1 cut(s) | 1350 |
| Psp6I | CCWGG | 3 cut(s) | 67, 326, 1756 |
| PspCI | CACGTG | 1 cut(s) | 1625 |
| PspGI | CCWGG | 3 cut(s) | 67, 326, 1756 |
| PspN4I | GGNNCC | 2 cut(s) | 1132, 1352 |
| PspPI | GGNCC | 3 cut(s) | 945, 1350, 1585 |
| PspPPI | RGGWCCY | 1 cut(s) | 1350 |
| PstI | CTGCAG | 1 cut(s) | 31 |
| PsuI | RGATCY | 1 cut(s) | 1002 |
| PvuI | CGATCG | 1 cut(s) | 587 |
| RsaI | GTAC | 5 cut(s) | 414, 552, 1086, 1702, 1707 |
| RsaNI | GTAC | 5 cut(s) | 413, 551, 1085, 1701, 1706 |
| RseI | CAYNNNNRTG | 2 cut(s) | 533, 659 |
| SalI | GTCGAC | 1 cut(s) | 1268 |
| SapI | GCTCTTC | 1 cut(s) | 528 |
| SaqAI | TTAA | 7 cut(s) | 6, 488, 882, 1371, 1493, 1503, 1595 |
| SatI | GCNGC | 9 cut(s) | 57, 342, 825, 1028, 1466, 1476, 1521, 1740, 1743 |
| Sau3AI | GATC | 8 cut(s) | 584, 974, 1002, 1058, 1069, 1158, 1203, 1609 |
| Sau96I | GGNCC | 3 cut(s) | 945, 1350, 1585 |
| SchI | GAGTC | 4 cut(s) | 142, 150, 975, 1404 |
| ScrFI | CCNGG | 4 cut(s) | 69, 328, 1515, 1758 |
| SduI | GDGCHC | 3 cut(s) | 53, 1334, 1717 |
| SfaNI | GCATC | 7 cut(s) | 322, 415, 570, 659, 700, 1207, 1822 |
| SfcI | CTRYAG | 2 cut(s) | 27, 1393 |
| SinI | GGWCC | 2 cut(s) | 945, 1350 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 533, 659 |
| SmlI | CTYRAG | 1 cut(s) | 5 |
| SmoI | CTYRAG | 1 cut(s) | 5 |
| SpeI | ACTAGT | 1 cut(s) | 361 |
| Sse9I | AATT | 8 cut(s) | 261, 555, 857, 963, 1368, 1459, 1600, 1652 |
| SsiI | CCGC | 6 cut(s) | 56, 276, 641, 794, 1028, 1742 |
| SspMI | CTAG | 3 cut(s) | 362, 899, 1118 |
| StyD4I | CCNGG | 4 cut(s) | 67, 326, 1513, 1756 |
| StyI | CCWWGG | 3 cut(s) | 1239, 1273, 1577 |
| TaaI | ACNGT | 4 cut(s) | 76, 1632, 1705, 1753 |
| TaiI | ACGT | 4 cut(s) | 552, 1284, 1627, 1861 |
| TaqI | TCGA | 7 cut(s) | 139, 144, 423, 657, 968, 977, 1269 |
| TasI | AATT | 8 cut(s) | 261, 555, 857, 963, 1368, 1459, 1600, 1652 |
| TatI | WGTACW | 3 cut(s) | 1084, 1700, 1705 |
| TauI | GCSGC | 3 cut(s) | 59, 1030, 1745 |
| TfiI | GAWTC | 5 cut(s) | 114, 651, 926, 1312, 1385 |
| Tru1I | TTAA | 7 cut(s) | 6, 488, 882, 1371, 1493, 1503, 1595 |
| Tru9I | TTAA | 7 cut(s) | 6, 488, 882, 1371, 1493, 1503, 1595 |
| TscAI | CASTG | 6 cut(s) | 31, 409, 540, 573, 955, 1339 |
| TseFI | GTSAC | 2 cut(s) | 545, 1859 |
| TseI | GCWGC | 6 cut(s) | 341, 824, 1465, 1475, 1520, 1739 |
| Tsp45I | GTSAC | 2 cut(s) | 545, 1859 |
| TspRI | CASTG | 6 cut(s) | 31, 409, 540, 573, 955, 1339 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1073 |
| Vha464I | CTTAAG | 1 cut(s) | 5 |
| VpaK11BI | GGWCC | 2 cut(s) | 945, 1350 |
| XapI | RAATTY | 2 cut(s) | 857, 1600 |
| XceI | RCATGY | 1 cut(s) | 1427 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1323 |
| XmiI | GTMKAC | 1 cut(s) | 1269 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1569 |
| XspI | CTAG | 3 cut(s) | 362, 899, 1118 |
| ZraI | GACGTC | 1 cut(s) | 1859 |
| Zsp2I | ATGCAT | 2 cut(s) | 1053, 1429 |