protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 135 |
| AciI | CCGC | 1 cut(s) | 531 |
| AclI | AACGTT | 1 cut(s) | 508 |
| AclWI | GGATC | 2 cut(s) | 538, 551 |
| AcsI | RAATTY | 1 cut(s) | 713 |
| AfaI | GTAC | 4 cut(s) | 152, 588, 659, 730 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 265, 266, 449, 540 |
| AflIII | ACRYGT | 1 cut(s) | 589 |
| AgsI | TTSAA | 4 cut(s) | 40, 256, 518, 526 |
| AjiI | CACGTC | 1 cut(s) | 650 |
| AluBI | AGCT | 4 cut(s) | 291, 349, 410, 614 |
| AluI | AGCT | 4 cut(s) | 291, 349, 410, 614 |
| AlwI | GGATC | 2 cut(s) | 538, 551 |
| AoxI | GGCC | 1 cut(s) | 720 |
| ApeKI | GCWGC | 5 cut(s) | 291, 605, 608, 611, 653 |
| ApoI | RAATTY | 1 cut(s) | 713 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 362 |
| AspA2I | CCTAGG | 1 cut(s) | 91 |
| AspS9I | GGNCC | 2 cut(s) | 88, 721 |
| AsuC2I | CCSGG | 1 cut(s) | 260 |
| AsuHPI | GGTGA | 1 cut(s) | 96 |
| AvaII | GGWCC | 1 cut(s) | 88 |
| AvrII | CCTAGG | 1 cut(s) | 91 |
| BamHI | GGATCC | 1 cut(s) | 543 |
| BbvI | GCAGC | 5 cut(s) | 278, 617, 620, 623, 665 |
| BccI | CCATC | 2 cut(s) | 78, 337 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 287, 321 |
| BcnI | CCSGG | 1 cut(s) | 260 |
| BfaI | CTAG | 4 cut(s) | 81, 92, 309, 407 |
| BisI | GCNGC | 5 cut(s) | 292, 606, 609, 612, 654 |
| BlnI | CCTAGG | 1 cut(s) | 91 |
| BlsI | GCNGC | 5 cut(s) | 293, 607, 610, 613, 655 |
| Bme1390I | CCNGG | 1 cut(s) | 260 |
| Bme18I | GGWCC | 1 cut(s) | 88 |
| BmgBI | CACGTC | 1 cut(s) | 650 |
| BmgT120I | GGNCC | 2 cut(s) | 88, 721 |
| BmiI | GGNNCC | 2 cut(s) | 89, 545 |
| BmrFI | CCNGG | 1 cut(s) | 260 |
| BmsI | GCATC | 2 cut(s) | 99, 295 |
| BpuEI | CTTGAG | 1 cut(s) | 600 |
| BpuMI | CCSGG | 1 cut(s) | 260 |
| BsaAI | YACGTR | 1 cut(s) | 590 |
| BsaJI | CCNNGG | 2 cut(s) | 91, 459 |
| BsaWI | WCCGGW | 1 cut(s) | 501 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 265, 266, 449, 540 |
| Bse1I | ACTGG | 1 cut(s) | 242 |
| BseDI | CCNNGG | 2 cut(s) | 91, 459 |
| BseGI | GGATG | 3 cut(s) | 268, 571, 672 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 265, 266, 449, 540 |
| BseNI | ACTGG | 1 cut(s) | 242 |
| BseXI | GCAGC | 5 cut(s) | 278, 617, 620, 623, 665 |
| BsgI | GTGCAG | 2 cut(s) | 200, 672 |
| BshFI | GGCC | 1 cut(s) | 722 |
| BsiSI | CCGG | 3 cut(s) | 260, 502, 547 |
| BslFI | GGGAC | 3 cut(s) | 18, 101, 299 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 265, 266, 449, 540 |
| BsmFI | GGGAC | 3 cut(s) | 18, 101, 299 |
| BsmI | GAATGC | 1 cut(s) | 586 |
| BsnI | GGCC | 1 cut(s) | 722 |
| Bsp143I | GATC | 2 cut(s) | 67, 543 |
| BspACI | CCGC | 1 cut(s) | 531 |
| BspANI | GGCC | 1 cut(s) | 722 |
| BspHI | TCATGA | 1 cut(s) | 319 |
| BspLI | GGNNCC | 2 cut(s) | 89, 545 |
| BspPI | GGATC | 2 cut(s) | 538, 551 |
| BsrI | ACTGG | 1 cut(s) | 242 |
| BssECI | CCNNGG | 2 cut(s) | 91, 459 |
| BssMI | GATC | 2 cut(s) | 67, 543 |
| BssT1I | CCWWGG | 1 cut(s) | 91 |
| Bst4CI | ACNGT | 1 cut(s) | 44 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 398 |
| BstBAI | YACGTR | 1 cut(s) | 590 |
| BstC8I | GCNNGC | 1 cut(s) | 552 |
| BstF5I | GGATG | 3 cut(s) | 268, 571, 672 |
| BstKTI | GATC | 2 cut(s) | 70, 546 |
| BstMBI | GATC | 2 cut(s) | 67, 543 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 398, 407, 611 |
| BstNSI | RCATGY | 1 cut(s) | 493 |
| BstSCI | CCNGG | 1 cut(s) | 258 |
| BstV1I | GCAGC | 5 cut(s) | 278, 617, 620, 623, 665 |
| BstX2I | RGATCY | 1 cut(s) | 543 |
| BstYI | RGATCY | 1 cut(s) | 543 |
| BsuRI | GGCC | 1 cut(s) | 722 |
| BtrI | CACGTC | 1 cut(s) | 650 |
| BtsCI | GGATG | 3 cut(s) | 268, 571, 672 |
| BtsI | GCAGTG | 1 cut(s) | 119 |
| BtsIMutI | CAGTG | 1 cut(s) | 119 |
| Cac8I | GCNNGC | 1 cut(s) | 552 |
| CciI | TCATGA | 1 cut(s) | 319 |
| Cfr13I | GGNCC | 2 cut(s) | 88, 721 |
| CseI | GACGC | 2 cut(s) | 305, 641 |
| Csp6I | GTAC | 4 cut(s) | 151, 587, 658, 729 |
| CviAII | CATG | 3 cut(s) | 184, 320, 490 |
| CviJI | RGCY | 8 cut(s) | 291, 326, 349, 410, 440, 550, 614, 722 |
| CviKI_1 | RGCY | 8 cut(s) | 291, 326, 349, 410, 440, 550, 614, 722 |
| CviQI | GTAC | 4 cut(s) | 151, 587, 658, 729 |
| DpnI | GATC | 2 cut(s) | 69, 545 |
| DpnII | GATC | 2 cut(s) | 67, 543 |
| EciI | GGCGGA | 1 cut(s) | 520 |
| Eco130I | CCWWGG | 1 cut(s) | 91 |
| Eco47I | GGWCC | 1 cut(s) | 88 |
| EcoO109I | RGGNCCY | 1 cut(s) | 88 |
| EcoT14I | CCWWGG | 1 cut(s) | 91 |
| ErhI | CCWWGG | 1 cut(s) | 91 |
| FaeI | CATG | 3 cut(s) | 187, 323, 493 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 394, 426 |
| FaqI | GGGAC | 3 cut(s) | 18, 101, 299 |
| FatI | CATG | 3 cut(s) | 183, 319, 489 |
| FauNDI | CATATG | 1 cut(s) | 176 |
| FblI | GTMKAC | 1 cut(s) | 135 |
| Fnu4HI | GCNGC | 5 cut(s) | 292, 606, 609, 612, 654 |
| FokI | GGATG | 3 cut(s) | 275, 558, 659 |
| Fsp4HI | GCNGC | 5 cut(s) | 292, 606, 609, 612, 654 |
| FspBI | CTAG | 4 cut(s) | 81, 92, 309, 407 |
| GluI | GCNGC | 5 cut(s) | 292, 606, 609, 612, 654 |
| HaeIII | GGCC | 1 cut(s) | 722 |
| HapII | CCGG | 3 cut(s) | 260, 502, 547 |
| HgaI | GACGC | 2 cut(s) | 305, 641 |
| Hin1II | CATG | 3 cut(s) | 187, 323, 493 |
| HinfI | GANTC | 1 cut(s) | 708 |
| HpaII | CCGG | 3 cut(s) | 260, 502, 547 |
| HphI | GGTGA | 1 cut(s) | 96 |
| Hpy166II | GTNNAC | 1 cut(s) | 136 |
| Hpy188I | TCNGA | 3 cut(s) | 129, 357, 380 |
| Hpy188III | TCNNGA | 7 cut(s) | 47, 81, 320, 484, 557, 617, 705 |
| Hpy8I | GTNNAC | 1 cut(s) | 136 |
| Hpy99I | CGWCG | 2 cut(s) | 224, 729 |
| HpyAV | CCTTC | 2 cut(s) | 352, 512 |
| HpyCH4III | ACNGT | 1 cut(s) | 44 |
| HpyCH4IV | ACGT | 3 cut(s) | 508, 589, 649 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 398, 407, 611 |
| HpySE526I | ACGT | 3 cut(s) | 508, 589, 649 |
| Hsp92II | CATG | 3 cut(s) | 187, 323, 493 |
| Kzo9I | GATC | 2 cut(s) | 67, 543 |
| LmnI | GCTCC | 1 cut(s) | 346 |
| LpnPI | CCDG | 9 cut(s) | 167, 223, 227, 273, 469, 515, 551, 560, 690 |
| Lsp1109I | GCAGC | 5 cut(s) | 278, 617, 620, 623, 665 |
| LweI | GCATC | 2 cut(s) | 99, 295 |
| MaeI | CTAG | 4 cut(s) | 81, 92, 309, 407 |
| MaeII | ACGT | 3 cut(s) | 508, 589, 649 |
| MalI | GATC | 2 cut(s) | 69, 545 |
| MboI | GATC | 2 cut(s) | 67, 543 |
| MboII | GAAGA | 1 cut(s) | 199 |
| MfeI | CAATTG | 1 cut(s) | 627 |
| MflI | RGATCY | 1 cut(s) | 543 |
| MluCI | AATT | 3 cut(s) | 201, 627, 713 |
| MnlI | CCTC | 5 cut(s) | 43, 316, 454, 534, 729 |
| MroXI | GAANNNNTTC | 1 cut(s) | 362 |
| MseI | TTAA | 2 cut(s) | 479, 717 |
| MslI | CAYNNNNRTG | 1 cut(s) | 222 |
| MspA1I | CMGCKG | 1 cut(s) | 291 |
| MspI | CCGG | 3 cut(s) | 260, 502, 547 |
| MspR9I | CCNGG | 1 cut(s) | 260 |
| MunI | CAATTG | 1 cut(s) | 627 |
| Mva1269I | GAATGC | 1 cut(s) | 586 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 398, 407, 611 |
| NciI | CCSGG | 1 cut(s) | 260 |
| NdeI | CATATG | 1 cut(s) | 176 |
| NdeII | GATC | 2 cut(s) | 67, 543 |
| NlaIII | CATG | 3 cut(s) | 187, 323, 493 |
| NlaIV | GGNNCC | 2 cut(s) | 89, 545 |
| NspI | RCATGY | 1 cut(s) | 493 |
| PagI | TCATGA | 1 cut(s) | 319 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 456 |
| PctI | GAATGC | 1 cut(s) | 586 |
| PdmI | GAANNNNTTC | 1 cut(s) | 362 |
| PfeI | GAWTC | 1 cut(s) | 708 |
| PflFI | GACNNNGTC | 1 cut(s) | 563 |
| PkrI | GCNGC | 5 cut(s) | 293, 607, 610, 613, 655 |
| Ppu21I | YACGTR | 1 cut(s) | 590 |
| PpuMI | RGGWCCY | 1 cut(s) | 88 |
| Psp1406I | AACGTT | 1 cut(s) | 508 |
| Psp5II | RGGWCCY | 1 cut(s) | 88 |
| PspN4I | GGNNCC | 2 cut(s) | 89, 545 |
| PspPI | GGNCC | 2 cut(s) | 88, 721 |
| PspPPI | RGGWCCY | 1 cut(s) | 88 |
| PsuI | RGATCY | 1 cut(s) | 543 |
| PsyI | GACNNNGTC | 1 cut(s) | 563 |
| PvuII | CAGCTG | 1 cut(s) | 291 |
| RsaI | GTAC | 4 cut(s) | 152, 588, 659, 730 |
| RsaNI | GTAC | 4 cut(s) | 151, 587, 658, 729 |
| RseI | CAYNNNNRTG | 1 cut(s) | 222 |
| SaqAI | TTAA | 2 cut(s) | 479, 717 |
| SatI | GCNGC | 5 cut(s) | 292, 606, 609, 612, 654 |
| Sau3AI | GATC | 2 cut(s) | 67, 543 |
| Sau96I | GGNCC | 2 cut(s) | 88, 721 |
| ScrFI | CCNGG | 1 cut(s) | 260 |
| SfaNI | GCATC | 2 cut(s) | 99, 295 |
| SinI | GGWCC | 1 cut(s) | 88 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 222 |
| SmlI | CTYRAG | 1 cut(s) | 615 |
| SmoI | CTYRAG | 1 cut(s) | 615 |
| Sse9I | AATT | 3 cut(s) | 201, 627, 713 |
| SsiI | CCGC | 1 cut(s) | 531 |
| SspMI | CTAG | 4 cut(s) | 81, 92, 309, 407 |
| StyD4I | CCNGG | 1 cut(s) | 258 |
| StyI | CCWWGG | 1 cut(s) | 91 |
| TaaI | ACNGT | 1 cut(s) | 44 |
| TaiI | ACGT | 3 cut(s) | 511, 592, 652 |
| TaqII | GACCGA | 1 cut(s) | 473 |
| TasI | AATT | 3 cut(s) | 201, 627, 713 |
| TfiI | GAWTC | 1 cut(s) | 708 |
| Tru1I | TTAA | 2 cut(s) | 479, 717 |
| Tru9I | TTAA | 2 cut(s) | 479, 717 |
| TscAI | CASTG | 1 cut(s) | 119 |
| TseI | GCWGC | 5 cut(s) | 291, 605, 608, 611, 653 |
| TspDTI | ATGAA | 4 cut(s) | 22, 172, 593, 661 |
| TspGWI | ACGGA | 2 cut(s) | 465, 665 |
| TspRI | CASTG | 1 cut(s) | 119 |
| Tth111I | GACNNNGTC | 1 cut(s) | 563 |
| VpaK11BI | GGWCC | 1 cut(s) | 88 |
| XapI | RAATTY | 1 cut(s) | 713 |
| XbaI | TCTAGA | 1 cut(s) | 80 |
| XceI | RCATGY | 1 cut(s) | 493 |
| XmaJI | CCTAGG | 1 cut(s) | 91 |
| XmiI | GTMKAC | 1 cut(s) | 135 |
| XmnI | GAANNNNTTC | 1 cut(s) | 362 |
| XspI | CTAG | 4 cut(s) | 81, 92, 309, 407 |