protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ank_2 | PF12796 | 47 - 131 | 3.3e-08 | Ankyrin repeats (3 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 303 |
| AccII | CGCG | 1 cut(s) | 132 |
| AciI | CCGC | 3 cut(s) | 125, 130, 132 |
| AclWI | GGATC | 1 cut(s) | 416 |
| AcoI | YGGCCR | 1 cut(s) | 166 |
| AcuI | CTGAAG | 1 cut(s) | 63 |
| AfaI | GTAC | 1 cut(s) | 90 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 142 |
| AgeI | ACCGGT | 1 cut(s) | 251 |
| AgsI | TTSAA | 1 cut(s) | 241 |
| AluBI | AGCT | 3 cut(s) | 69, 149, 218 |
| AluI | AGCT | 3 cut(s) | 69, 149, 218 |
| Alw21I | GWGCWC | 1 cut(s) | 106 |
| AlwI | GGATC | 1 cut(s) | 416 |
| AoxI | GGCC | 3 cut(s) | 133, 166, 449 |
| AsiGI | ACCGGT | 1 cut(s) | 251 |
| AspS9I | GGNCC | 1 cut(s) | 127 |
| AvaII | GGWCC | 1 cut(s) | 127 |
| BalI | TGGCCA | 1 cut(s) | 168 |
| BbsI | GAAGAC | 1 cut(s) | 39 |
| Bbv12I | GWGCWC | 1 cut(s) | 106 |
| BccI | CCATC | 2 cut(s) | 305, 449 |
| BciVI | GTATCC | 1 cut(s) | 343 |
| BfaI | CTAG | 2 cut(s) | 341, 502 |
| BfuI | GTATCC | 1 cut(s) | 343 |
| BisI | GCNGC | 1 cut(s) | 133 |
| BlsI | GCNGC | 1 cut(s) | 134 |
| Bme18I | GGWCC | 1 cut(s) | 127 |
| BmgT120I | GGNCC | 1 cut(s) | 127 |
| BpiI | GAAGAC | 1 cut(s) | 39 |
| BpmI | CTGGAG | 2 cut(s) | 49, 120 |
| BsaJI | CCNNGG | 1 cut(s) | 130 |
| BsaWI | WCCGGW | 1 cut(s) | 251 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 142 |
| Bse118I | RCCGGY | 1 cut(s) | 251 |
| Bse1I | ACTGG | 1 cut(s) | 235 |
| BseDI | CCNNGG | 1 cut(s) | 130 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 142 |
| BseMII | CTCAG | 1 cut(s) | 453 |
| BseNI | ACTGG | 1 cut(s) | 235 |
| BseRI | GAGGAG | 1 cut(s) | 312 |
| Bsh1236I | CGCG | 1 cut(s) | 132 |
| BshFI | GGCC | 3 cut(s) | 135, 168, 451 |
| BshTI | ACCGGT | 1 cut(s) | 251 |
| BsiHKAI | GWGCWC | 1 cut(s) | 106 |
| BsiSI | CCGG | 2 cut(s) | 252, 448 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 142 |
| BsnI | GGCC | 3 cut(s) | 135, 168, 451 |
| Bsp1286I | GDGCHC | 1 cut(s) | 106 |
| Bsp143I | GATC | 2 cut(s) | 363, 421 |
| BspACI | CCGC | 3 cut(s) | 125, 130, 132 |
| BspANI | GGCC | 3 cut(s) | 135, 168, 451 |
| BspCNI | CTCAG | 1 cut(s) | 454 |
| BspFNI | CGCG | 1 cut(s) | 132 |
| BspPI | GGATC | 1 cut(s) | 416 |
| BspQI | GCTCTTC | 1 cut(s) | 225 |
| BsrFI | RCCGGY | 1 cut(s) | 251 |
| BsrI | ACTGG | 1 cut(s) | 235 |
| BssAI | RCCGGY | 1 cut(s) | 251 |
| BssECI | CCNNGG | 1 cut(s) | 130 |
| BssMI | GATC | 2 cut(s) | 363, 421 |
| Bst4CI | ACNGT | 4 cut(s) | 19, 180, 273, 308 |
| Bst6I | CTCTTC | 1 cut(s) | 225 |
| BstDEI | CTNAG | 3 cut(s) | 226, 375, 462 |
| BstDSI | CCRYGG | 1 cut(s) | 130 |
| BstFNI | CGCG | 1 cut(s) | 132 |
| BstKTI | GATC | 2 cut(s) | 366, 424 |
| BstMBI | GATC | 2 cut(s) | 363, 421 |
| BstNSI | RCATGY | 1 cut(s) | 110 |
| BstUI | CGCG | 1 cut(s) | 132 |
| BstV2I | GAAGAC | 1 cut(s) | 39 |
| BsuI | GTATCC | 1 cut(s) | 343 |
| BsuRI | GGCC | 3 cut(s) | 135, 168, 451 |
| BtgI | CCRYGG | 1 cut(s) | 130 |
| Cfr10I | RCCGGY | 1 cut(s) | 251 |
| Cfr13I | GGNCC | 1 cut(s) | 127 |
| Cfr42I | CCGCGG | 1 cut(s) | 133 |
| CpoI | CGGWCCG | 1 cut(s) | 127 |
| Csp6I | GTAC | 1 cut(s) | 89 |
| CspAI | ACCGGT | 1 cut(s) | 251 |
| CspI | CGGWCCG | 1 cut(s) | 127 |
| CviAII | CATG | 2 cut(s) | 107, 482 |
| CviQI | GTAC | 1 cut(s) | 89 |
| DdeI | CTNAG | 3 cut(s) | 226, 375, 462 |
| DpnI | GATC | 2 cut(s) | 365, 423 |
| DpnII | GATC | 2 cut(s) | 363, 421 |
| EaeI | YGGCCR | 1 cut(s) | 166 |
| Eam1104I | CTCTTC | 1 cut(s) | 225 |
| EarI | CTCTTC | 1 cut(s) | 225 |
| Eco47I | GGWCC | 1 cut(s) | 127 |
| Eco57I | CTGAAG | 1 cut(s) | 63 |
| FaeI | CATG | 2 cut(s) | 110, 485 |
| FaiI | YATR | 7 cut(s) | 108, 318, 332, 338, 383, 414, 483 |
| FatI | CATG | 2 cut(s) | 106, 481 |
| FblI | GTMKAC | 1 cut(s) | 303 |
| Fnu4HI | GCNGC | 1 cut(s) | 133 |
| Fsp4HI | GCNGC | 1 cut(s) | 133 |
| FspBI | CTAG | 2 cut(s) | 341, 502 |
| GluI | GCNGC | 1 cut(s) | 133 |
| GsuI | CTGGAG | 2 cut(s) | 49, 120 |
| HaeIII | GGCC | 3 cut(s) | 135, 168, 451 |
| HapII | CCGG | 2 cut(s) | 252, 448 |
| Hin1II | CATG | 2 cut(s) | 110, 485 |
| HincII | GTYRAC | 1 cut(s) | 49 |
| HindII | GTYRAC | 1 cut(s) | 49 |
| HinfI | GANTC | 2 cut(s) | 50, 485 |
| HpaII | CCGG | 2 cut(s) | 252, 448 |
| Hpy166II | GTNNAC | 3 cut(s) | 49, 276, 304 |
| Hpy188I | TCNGA | 4 cut(s) | 31, 43, 199, 463 |
| Hpy188III | TCNNGA | 1 cut(s) | 241 |
| Hpy8I | GTNNAC | 3 cut(s) | 49, 276, 304 |
| HpyAV | CCTTC | 1 cut(s) | 435 |
| HpyCH4III | ACNGT | 4 cut(s) | 19, 180, 273, 308 |
| HpyCH4IV | ACGT | 1 cut(s) | 246 |
| HpyCH4V | TGCA | 2 cut(s) | 110, 381 |
| HpyF3I | CTNAG | 3 cut(s) | 226, 375, 462 |
| HpySE526I | ACGT | 1 cut(s) | 246 |
| Hsp92II | CATG | 2 cut(s) | 110, 485 |
| KspI | CCGCGG | 1 cut(s) | 133 |
| Kzo9I | GATC | 2 cut(s) | 363, 421 |
| LguI | GCTCTTC | 1 cut(s) | 225 |
| LmnI | GCTCC | 2 cut(s) | 68, 101 |
| LpnPI | CCDG | 7 cut(s) | 79, 84, 149, 248, 265, 461, 465 |
| MaeI | CTAG | 2 cut(s) | 341, 502 |
| MaeII | ACGT | 1 cut(s) | 246 |
| MaeIII | GTNAC | 2 cut(s) | 13, 247 |
| MalI | GATC | 2 cut(s) | 365, 423 |
| MboI | GATC | 2 cut(s) | 363, 421 |
| MboII | GAAGA | 2 cut(s) | 44, 212 |
| MhlI | GDGCHC | 1 cut(s) | 106 |
| MlsI | TGGCCA | 1 cut(s) | 168 |
| MluCI | AATT | 2 cut(s) | 139, 369 |
| MluNI | TGGCCA | 1 cut(s) | 168 |
| MlyI | GAGTC | 2 cut(s) | 44, 479 |
| MnlI | CCTC | 2 cut(s) | 333, 384 |
| Mox20I | TGGCCA | 1 cut(s) | 168 |
| MscI | TGGCCA | 1 cut(s) | 168 |
| MseI | TTAA | 2 cut(s) | 6, 182 |
| Msp20I | TGGCCA | 1 cut(s) | 168 |
| MspA1I | CMGCKG | 1 cut(s) | 132 |
| MspI | CCGG | 2 cut(s) | 252, 448 |
| MvnI | CGCG | 1 cut(s) | 132 |
| NdeII | GATC | 2 cut(s) | 363, 421 |
| NlaIII | CATG | 2 cut(s) | 110, 485 |
| NspI | RCATGY | 1 cut(s) | 110 |
| PciSI | GCTCTTC | 1 cut(s) | 225 |
| PinAI | ACCGGT | 1 cut(s) | 251 |
| PkrI | GCNGC | 1 cut(s) | 134 |
| PleI | GAGTC | 2 cut(s) | 44, 479 |
| PpsI | GAGTC | 2 cut(s) | 44, 479 |
| PspPI | GGNCC | 1 cut(s) | 127 |
| RsaI | GTAC | 1 cut(s) | 90 |
| RsaNI | GTAC | 1 cut(s) | 89 |
| Rsr2I | CGGWCCG | 1 cut(s) | 127 |
| RsrII | CGGWCCG | 1 cut(s) | 127 |
| SacII | CCGCGG | 1 cut(s) | 133 |
| SapI | GCTCTTC | 1 cut(s) | 225 |
| SaqAI | TTAA | 2 cut(s) | 6, 182 |
| SatI | GCNGC | 1 cut(s) | 133 |
| Sau3AI | GATC | 2 cut(s) | 363, 421 |
| Sau96I | GGNCC | 1 cut(s) | 127 |
| SchI | GAGTC | 2 cut(s) | 44, 479 |
| SduI | GDGCHC | 1 cut(s) | 106 |
| SetI | ASST | 4 cut(s) | 71, 151, 220, 249 |
| Sfr303I | CCGCGG | 1 cut(s) | 133 |
| SgrBI | CCGCGG | 1 cut(s) | 133 |
| SinI | GGWCC | 1 cut(s) | 127 |
| Sse9I | AATT | 2 cut(s) | 139, 369 |
| SsiI | CCGC | 3 cut(s) | 125, 130, 132 |
| SspI | AATATT | 1 cut(s) | 264 |
| SspMI | CTAG | 2 cut(s) | 341, 502 |
| TaaI | ACNGT | 4 cut(s) | 19, 180, 273, 308 |
| TaiI | ACGT | 1 cut(s) | 249 |
| TaqI | TCGA | 3 cut(s) | 53, 366, 420 |
| TasI | AATT | 2 cut(s) | 139, 369 |
| TatI | WGTACW | 1 cut(s) | 88 |
| TauI | GCSGC | 1 cut(s) | 135 |
| Tru1I | TTAA | 2 cut(s) | 6, 182 |
| Tru9I | TTAA | 2 cut(s) | 6, 182 |
| TspDTI | ATGAA | 2 cut(s) | 99, 401 |
| VpaK11BI | GGWCC | 1 cut(s) | 127 |
| XceI | RCATGY | 1 cut(s) | 110 |
| XmiI | GTMKAC | 1 cut(s) | 303 |
| XspI | CTAG | 2 cut(s) | 341, 502 |