protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 58 - 142 | 2e-12 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 178 |
| Acc36I | ACCTGC | 1 cut(s) | 178 |
| AclWI | GGATC | 1 cut(s) | 41 |
| AfaI | GTAC | 1 cut(s) | 166 |
| AgsI | TTSAA | 2 cut(s) | 25, 270 |
| AlwI | GGATC | 1 cut(s) | 41 |
| AoxI | GGCC | 2 cut(s) | 361, 415 |
| ApeKI | GCWGC | 1 cut(s) | 173 |
| AsuHPI | GGTGA | 2 cut(s) | 295, 361 |
| AxyI | CCTNAGG | 1 cut(s) | 219 |
| BbsI | GAAGAC | 1 cut(s) | 206 |
| BbvI | GCAGC | 1 cut(s) | 185 |
| BfmI | CTRYAG | 1 cut(s) | 171 |
| BfuAI | ACCTGC | 1 cut(s) | 178 |
| BisI | GCNGC | 1 cut(s) | 174 |
| BlsI | GCNGC | 1 cut(s) | 175 |
| BmsI | GCATC | 2 cut(s) | 238, 492 |
| BpiI | GAAGAC | 1 cut(s) | 206 |
| BpuEI | CTTGAG | 1 cut(s) | 303 |
| Bse1I | ACTGG | 2 cut(s) | 474, 482 |
| Bse21I | CCTNAGG | 1 cut(s) | 219 |
| Bse3DI | GCAATG | 3 cut(s) | 39, 338, 512 |
| BseGI | GGATG | 1 cut(s) | 507 |
| BseMI | GCAATG | 3 cut(s) | 39, 338, 512 |
| BseMII | CTCAG | 1 cut(s) | 233 |
| BseNI | ACTGG | 2 cut(s) | 474, 482 |
| BseXI | GCAGC | 1 cut(s) | 185 |
| BshFI | GGCC | 2 cut(s) | 363, 417 |
| BsmI | GAATGC | 2 cut(s) | 176, 297 |
| BsnI | GGCC | 2 cut(s) | 363, 417 |
| Bsp1407I | TGTACA | 1 cut(s) | 164 |
| Bsp143I | GATC | 1 cut(s) | 46 |
| BspANI | GGCC | 2 cut(s) | 363, 417 |
| BspCNI | CTCAG | 1 cut(s) | 232 |
| BspMAI | CTGCAG | 1 cut(s) | 175 |
| BspMI | ACCTGC | 1 cut(s) | 178 |
| BspPI | GGATC | 1 cut(s) | 41 |
| BsrDI | GCAATG | 3 cut(s) | 39, 338, 512 |
| BsrGI | TGTACA | 1 cut(s) | 164 |
| BsrI | ACTGG | 2 cut(s) | 474, 482 |
| BssMI | GATC | 1 cut(s) | 46 |
| Bst4CI | ACNGT | 1 cut(s) | 184 |
| BstAUI | TGTACA | 1 cut(s) | 164 |
| BstC8I | GCNNGC | 1 cut(s) | 471 |
| BstDEI | CTNAG | 1 cut(s) | 219 |
| BstF5I | GGATG | 1 cut(s) | 507 |
| BstKTI | GATC | 1 cut(s) | 49 |
| BstMBI | GATC | 1 cut(s) | 46 |
| BstSFI | CTRYAG | 1 cut(s) | 171 |
| BstV1I | GCAGC | 1 cut(s) | 185 |
| BstV2I | GAAGAC | 1 cut(s) | 206 |
| BstX2I | RGATCY | 1 cut(s) | 46 |
| BstYI | RGATCY | 1 cut(s) | 46 |
| Bsu36I | CCTNAGG | 1 cut(s) | 219 |
| BsuRI | GGCC | 2 cut(s) | 363, 417 |
| BtsCI | GGATG | 1 cut(s) | 507 |
| BtsIMutI | CAGTG | 1 cut(s) | 481 |
| BveI | ACCTGC | 1 cut(s) | 178 |
| Cac8I | GCNNGC | 1 cut(s) | 471 |
| Csp6I | GTAC | 1 cut(s) | 165 |
| CviAII | CATG | 1 cut(s) | 286 |
| CviJI | RGCY | 2 cut(s) | 363, 417 |
| CviKI_1 | RGCY | 2 cut(s) | 363, 417 |
| CviQI | GTAC | 1 cut(s) | 165 |
| DdeI | CTNAG | 1 cut(s) | 219 |
| DpnI | GATC | 1 cut(s) | 48 |
| DpnII | GATC | 1 cut(s) | 46 |
| Eco147I | AGGCCT | 1 cut(s) | 363 |
| Eco81I | CCTNAGG | 1 cut(s) | 219 |
| FaeI | CATG | 1 cut(s) | 289 |
| FaiI | YATR | 8 cut(s) | 53, 68, 74, 239, 287, 395, 497, 499 |
| FatI | CATG | 1 cut(s) | 285 |
| FauNDI | CATATG | 1 cut(s) | 497 |
| Fnu4HI | GCNGC | 1 cut(s) | 174 |
| FokI | GGATG | 1 cut(s) | 514 |
| Fsp4HI | GCNGC | 1 cut(s) | 174 |
| GluI | GCNGC | 1 cut(s) | 174 |
| HaeIII | GGCC | 2 cut(s) | 363, 417 |
| Hin1II | CATG | 1 cut(s) | 289 |
| HinfI | GANTC | 2 cut(s) | 62, 109 |
| HphI | GGTGA | 2 cut(s) | 295, 361 |
| Hpy166II | GTNNAC | 1 cut(s) | 167 |
| Hpy188I | TCNGA | 1 cut(s) | 247 |
| Hpy188III | TCNNGA | 2 cut(s) | 320, 431 |
| Hpy8I | GTNNAC | 1 cut(s) | 167 |
| HpyAV | CCTTC | 1 cut(s) | 142 |
| HpyCH4III | ACNGT | 1 cut(s) | 184 |
| HpyCH4IV | ACGT | 1 cut(s) | 310 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 44, 173, 251, 505 |
| HpyF3I | CTNAG | 1 cut(s) | 219 |
| HpySE526I | ACGT | 1 cut(s) | 310 |
| Hsp92II | CATG | 1 cut(s) | 289 |
| Kzo9I | GATC | 1 cut(s) | 46 |
| LpnPI | CCDG | 5 cut(s) | 183, 195, 206, 487, 495 |
| Lsp1109I | GCAGC | 1 cut(s) | 185 |
| LweI | GCATC | 2 cut(s) | 238, 492 |
| MaeII | ACGT | 1 cut(s) | 310 |
| MaeIII | GTNAC | 1 cut(s) | 388 |
| MalI | GATC | 1 cut(s) | 48 |
| MboI | GATC | 1 cut(s) | 46 |
| MboII | GAAGA | 2 cut(s) | 206, 258 |
| MfeI | CAATTG | 1 cut(s) | 447 |
| MflI | RGATCY | 1 cut(s) | 46 |
| MluCI | AATT | 3 cut(s) | 119, 447, 506 |
| MnlI | CCTC | 8 cut(s) | 22, 124, 193, 228, 286, 316, 383, 499 |
| MslI | CAYNNNNRTG | 3 cut(s) | 350, 395, 500 |
| MunI | CAATTG | 1 cut(s) | 447 |
| Mva1269I | GAATGC | 2 cut(s) | 176, 297 |
| NdeI | CATATG | 1 cut(s) | 497 |
| NdeII | GATC | 1 cut(s) | 46 |
| NlaIII | CATG | 1 cut(s) | 289 |
| NmuCI | GTSAC | 1 cut(s) | 388 |
| PaqCI | CACCTGC | 1 cut(s) | 178 |
| PceI | AGGCCT | 1 cut(s) | 363 |
| PctI | GAATGC | 2 cut(s) | 176, 297 |
| PfeI | GAWTC | 2 cut(s) | 62, 109 |
| PkrI | GCNGC | 1 cut(s) | 175 |
| PstI | CTGCAG | 1 cut(s) | 175 |
| PsuI | RGATCY | 1 cut(s) | 46 |
| RsaI | GTAC | 1 cut(s) | 166 |
| RsaNI | GTAC | 1 cut(s) | 165 |
| RseI | CAYNNNNRTG | 3 cut(s) | 350, 395, 500 |
| SatI | GCNGC | 1 cut(s) | 174 |
| Sau3AI | GATC | 1 cut(s) | 46 |
| SetI | ASST | 7 cut(s) | 33, 172, 214, 225, 278, 308, 313 |
| SfaNI | GCATC | 2 cut(s) | 238, 492 |
| SfcI | CTRYAG | 1 cut(s) | 171 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 350, 395, 500 |
| SmlI | CTYRAG | 1 cut(s) | 318 |
| SmoI | CTYRAG | 1 cut(s) | 318 |
| Sse9I | AATT | 3 cut(s) | 119, 447, 506 |
| SseBI | AGGCCT | 1 cut(s) | 363 |
| SspI | AATATT | 2 cut(s) | 99, 555 |
| StuI | AGGCCT | 1 cut(s) | 363 |
| TaaI | ACNGT | 1 cut(s) | 184 |
| TaiI | ACGT | 1 cut(s) | 313 |
| TaqI | TCGA | 1 cut(s) | 278 |
| TasI | AATT | 3 cut(s) | 119, 447, 506 |
| TatI | WGTACW | 1 cut(s) | 164 |
| TfiI | GAWTC | 2 cut(s) | 62, 109 |
| TscAI | CASTG | 1 cut(s) | 481 |
| TseFI | GTSAC | 1 cut(s) | 388 |
| TseI | GCWGC | 1 cut(s) | 173 |
| Tsp45I | GTSAC | 1 cut(s) | 388 |
| TspDTI | ATGAA | 2 cut(s) | 161, 484 |
| TspRI | CASTG | 1 cut(s) | 481 |