protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 48, 62 |
| AclWI | GGATC | 2 cut(s) | 133, 146 |
| AcsI | RAATTY | 1 cut(s) | 160 |
| AgsI | TTSAA | 4 cut(s) | 22, 296, 362, 370 |
| AjnI | CCWGG | 1 cut(s) | 102 |
| AleI | CACNNNNGTG | 1 cut(s) | 392 |
| AluBI | AGCT | 2 cut(s) | 182, 242 |
| AluI | AGCT | 2 cut(s) | 182, 242 |
| Alw26I | GTCTC | 2 cut(s) | 133, 230 |
| AlwI | GGATC | 2 cut(s) | 133, 146 |
| ApeKI | GCWGC | 1 cut(s) | 182 |
| ApoI | RAATTY | 1 cut(s) | 160 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 90, 122, 295, 327 |
| AsuHPI | GGTGA | 1 cut(s) | 76 |
| BamHI | GGATCC | 1 cut(s) | 138 |
| BanII | GRGCYC | 1 cut(s) | 354 |
| BbsI | GAAGAC | 2 cut(s) | 21, 322 |
| BbvI | GCAGC | 1 cut(s) | 169 |
| BccI | CCATC | 1 cut(s) | 32 |
| BciT130I | CCWGG | 1 cut(s) | 104 |
| BcoDI | GTCTC | 2 cut(s) | 133, 230 |
| BisI | GCNGC | 1 cut(s) | 183 |
| BlsI | GCNGC | 1 cut(s) | 184 |
| Bme1390I | CCNGG | 1 cut(s) | 104 |
| BmiI | GGNNCC | 1 cut(s) | 140 |
| BmrFI | CCNGG | 1 cut(s) | 104 |
| BpiI | GAAGAC | 2 cut(s) | 21, 322 |
| BsaJI | CCNNGG | 1 cut(s) | 256 |
| BseBI | CCWGG | 1 cut(s) | 104 |
| BseDI | CCNNGG | 1 cut(s) | 256 |
| BseRI | GAGGAG | 1 cut(s) | 138 |
| BseXI | GCAGC | 1 cut(s) | 169 |
| Bsh1285I | CGRYCG | 1 cut(s) | 253 |
| BsiEI | CGRYCG | 1 cut(s) | 253 |
| BsmAI | GTCTC | 2 cut(s) | 133, 230 |
| BsmBI | CGTCTC | 1 cut(s) | 230 |
| Bsp1286I | GDGCHC | 1 cut(s) | 354 |
| Bsp143I | GATC | 1 cut(s) | 138 |
| Bsp19I | CCATGG | 1 cut(s) | 256 |
| BspACI | CCGC | 2 cut(s) | 48, 62 |
| BspLI | GGNNCC | 1 cut(s) | 140 |
| BspPI | GGATC | 2 cut(s) | 133, 146 |
| BssECI | CCNNGG | 1 cut(s) | 256 |
| BssMI | GATC | 1 cut(s) | 138 |
| BssT1I | CCWWGG | 1 cut(s) | 256 |
| Bst2UI | CCWGG | 1 cut(s) | 104 |
| Bst4CI | ACNGT | 4 cut(s) | 94, 224, 251, 308 |
| Bst6I | CTCTTC | 1 cut(s) | 357 |
| BstDSI | CCRYGG | 1 cut(s) | 256 |
| BstKTI | GATC | 1 cut(s) | 141 |
| BstMAI | GTCTC | 2 cut(s) | 133, 230 |
| BstMBI | GATC | 1 cut(s) | 138 |
| BstMCI | CGRYCG | 1 cut(s) | 253 |
| BstNI | CCWGG | 1 cut(s) | 104 |
| BstSCI | CCNGG | 1 cut(s) | 102 |
| BstV1I | GCAGC | 1 cut(s) | 169 |
| BstV2I | GAAGAC | 2 cut(s) | 21, 322 |
| BstX2I | RGATCY | 1 cut(s) | 138 |
| BstYI | RGATCY | 1 cut(s) | 138 |
| BtgI | CCRYGG | 1 cut(s) | 256 |
| BtgZI | GCGATG | 1 cut(s) | 60 |
| BtsI | GCAGTG | 1 cut(s) | 344 |
| BtsIMutI | CAGTG | 2 cut(s) | 33, 344 |
| CviAII | CATG | 1 cut(s) | 257 |
| CviJI | RGCY | 5 cut(s) | 182, 209, 242, 352, 385 |
| CviKI_1 | RGCY | 5 cut(s) | 182, 209, 242, 352, 385 |
| DpnI | GATC | 1 cut(s) | 140 |
| DpnII | GATC | 1 cut(s) | 138 |
| Eam1104I | CTCTTC | 1 cut(s) | 357 |
| EarI | CTCTTC | 1 cut(s) | 357 |
| Eco130I | CCWWGG | 1 cut(s) | 256 |
| Eco24I | GRGCYC | 1 cut(s) | 354 |
| EcoRII | CCWGG | 1 cut(s) | 102 |
| EcoT14I | CCWWGG | 1 cut(s) | 256 |
| EcoT38I | GRGCYC | 1 cut(s) | 354 |
| ErhI | CCWWGG | 1 cut(s) | 256 |
| Esp3I | CGTCTC | 1 cut(s) | 230 |
| FaeI | CATG | 1 cut(s) | 260 |
| FaiI | YATR | 4 cut(s) | 60, 71, 179, 258 |
| FatI | CATG | 1 cut(s) | 256 |
| Fnu4HI | GCNGC | 1 cut(s) | 183 |
| FriOI | GRGCYC | 1 cut(s) | 354 |
| Fsp4HI | GCNGC | 1 cut(s) | 183 |
| GluI | GCNGC | 1 cut(s) | 183 |
| Hin1II | CATG | 1 cut(s) | 260 |
| HphI | GGTGA | 1 cut(s) | 76 |
| Hpy166II | GTNNAC | 1 cut(s) | 397 |
| Hpy188I | TCNGA | 1 cut(s) | 110 |
| Hpy188III | TCNNGA | 1 cut(s) | 88 |
| Hpy8I | GTNNAC | 1 cut(s) | 397 |
| HpyAV | CCTTC | 1 cut(s) | 153 |
| HpyCH4III | ACNGT | 4 cut(s) | 94, 224, 251, 308 |
| HpyCH4V | TGCA | 3 cut(s) | 185, 337, 342 |
| Hsp92II | CATG | 1 cut(s) | 260 |
| Kzo9I | GATC | 1 cut(s) | 138 |
| LpnPI | CCDG | 5 cut(s) | 89, 116, 265, 360, 405 |
| Lsp1109I | GCAGC | 1 cut(s) | 169 |
| MaeIII | GTNAC | 2 cut(s) | 41, 64 |
| MalI | GATC | 1 cut(s) | 140 |
| MboI | GATC | 1 cut(s) | 138 |
| MboII | GAAGA | 3 cut(s) | 26, 327, 374 |
| MfeI | CAATTG | 1 cut(s) | 196 |
| MflI | RGATCY | 1 cut(s) | 138 |
| MhlI | GDGCHC | 1 cut(s) | 354 |
| MluCI | AATT | 6 cut(s) | 160, 186, 196, 287, 357, 415 |
| MmeI | TCCRAC | 1 cut(s) | 88 |
| MnlI | CCTC | 4 cut(s) | 4, 112, 159, 315 |
| MseI | TTAA | 2 cut(s) | 164, 189 |
| MslI | CAYNNNNRTG | 1 cut(s) | 392 |
| MspR9I | CCNGG | 1 cut(s) | 104 |
| MunI | CAATTG | 1 cut(s) | 196 |
| MvaI | CCWGG | 1 cut(s) | 104 |
| NcoI | CCATGG | 1 cut(s) | 256 |
| NdeII | GATC | 1 cut(s) | 138 |
| NlaIII | CATG | 1 cut(s) | 260 |
| NlaIV | GGNNCC | 1 cut(s) | 140 |
| NmuCI | GTSAC | 2 cut(s) | 41, 64 |
| OliI | CACNNNNGTG | 1 cut(s) | 392 |
| PflFI | GACNNNGTC | 1 cut(s) | 70 |
| PkrI | GCNGC | 1 cut(s) | 184 |
| Psp6I | CCWGG | 1 cut(s) | 102 |
| PspGI | CCWGG | 1 cut(s) | 102 |
| PspN4I | GGNNCC | 1 cut(s) | 140 |
| PsuI | RGATCY | 1 cut(s) | 138 |
| PsyI | GACNNNGTC | 1 cut(s) | 70 |
| RseI | CAYNNNNRTG | 1 cut(s) | 392 |
| SaqAI | TTAA | 2 cut(s) | 164, 189 |
| SatI | GCNGC | 1 cut(s) | 183 |
| Sau3AI | GATC | 1 cut(s) | 138 |
| ScrFI | CCNGG | 1 cut(s) | 104 |
| SduI | GDGCHC | 1 cut(s) | 354 |
| SetI | ASST | 2 cut(s) | 184, 244 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 392 |
| Sse9I | AATT | 6 cut(s) | 160, 186, 196, 287, 357, 415 |
| SsiI | CCGC | 2 cut(s) | 48, 62 |
| StyD4I | CCNGG | 1 cut(s) | 102 |
| StyI | CCWWGG | 1 cut(s) | 256 |
| TaaI | ACNGT | 4 cut(s) | 94, 224, 251, 308 |
| TaqI | TCGA | 1 cut(s) | 313 |
| TasI | AATT | 6 cut(s) | 160, 186, 196, 287, 357, 415 |
| Tru1I | TTAA | 2 cut(s) | 164, 189 |
| Tru9I | TTAA | 2 cut(s) | 164, 189 |
| TscAI | CASTG | 2 cut(s) | 40, 344 |
| TseFI | GTSAC | 2 cut(s) | 41, 64 |
| TseI | GCWGC | 1 cut(s) | 182 |
| Tsp45I | GTSAC | 2 cut(s) | 41, 64 |
| TspRI | CASTG | 2 cut(s) | 40, 344 |
| Tth111I | GACNNNGTC | 1 cut(s) | 70 |
| XapI | RAATTY | 1 cut(s) | 160 |