protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 22 - 132 | 9.4e-25 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 549 |
| AcsI | RAATTY | 1 cut(s) | 307 |
| AcuI | CTGAAG | 2 cut(s) | 231, 323 |
| AfaI | GTAC | 1 cut(s) | 88 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 549 |
| AjnI | CCWGG | 2 cut(s) | 142, 520 |
| AluBI | AGCT | 1 cut(s) | 185 |
| AluI | AGCT | 1 cut(s) | 185 |
| Alw21I | GWGCWC | 1 cut(s) | 103 |
| Alw26I | GTCTC | 1 cut(s) | 64 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 143 |
| AoxI | GGCC | 2 cut(s) | 331, 420 |
| ApeKI | GCWGC | 2 cut(s) | 125, 128 |
| ApoI | RAATTY | 1 cut(s) | 307 |
| AspS9I | GGNCC | 2 cut(s) | 420, 518 |
| AvaII | GGWCC | 1 cut(s) | 518 |
| BauI | CACGAG | 1 cut(s) | 32 |
| Bbv12I | GWGCWC | 1 cut(s) | 103 |
| BbvI | GCAGC | 2 cut(s) | 112, 140 |
| BciT130I | CCWGG | 2 cut(s) | 144, 522 |
| BcoDI | GTCTC | 1 cut(s) | 64 |
| BfaI | CTAG | 2 cut(s) | 182, 447 |
| BfmI | CTRYAG | 1 cut(s) | 126 |
| BisI | GCNGC | 2 cut(s) | 126, 129 |
| BlsI | GCNGC | 2 cut(s) | 127, 130 |
| Bme1390I | CCNGG | 2 cut(s) | 144, 522 |
| Bme18I | GGWCC | 1 cut(s) | 518 |
| BmgT120I | GGNCC | 2 cut(s) | 420, 518 |
| BmrFI | CCNGG | 2 cut(s) | 144, 522 |
| BsaJI | CCNNGG | 1 cut(s) | 548 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 549 |
| Bse1I | ACTGG | 1 cut(s) | 455 |
| BseBI | CCWGG | 2 cut(s) | 144, 522 |
| BseDI | CCNNGG | 1 cut(s) | 548 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 549 |
| BseNI | ACTGG | 1 cut(s) | 455 |
| BseRI | GAGGAG | 1 cut(s) | 62 |
| BseXI | GCAGC | 2 cut(s) | 112, 140 |
| BshFI | GGCC | 2 cut(s) | 333, 422 |
| BsiHKAI | GWGCWC | 1 cut(s) | 103 |
| BslFI | GGGAC | 1 cut(s) | 85 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 549 |
| BsmAI | GTCTC | 1 cut(s) | 64 |
| BsmFI | GGGAC | 1 cut(s) | 85 |
| BsnI | GGCC | 2 cut(s) | 333, 422 |
| Bsp1286I | GDGCHC | 1 cut(s) | 103 |
| Bsp1407I | TGTACA | 1 cut(s) | 86 |
| Bsp19I | CCATGG | 1 cut(s) | 548 |
| BspANI | GGCC | 2 cut(s) | 333, 422 |
| BspMAI | CTGCAG | 1 cut(s) | 130 |
| BsrGI | TGTACA | 1 cut(s) | 86 |
| BsrI | ACTGG | 1 cut(s) | 455 |
| BssECI | CCNNGG | 1 cut(s) | 548 |
| BssSI | CACGAG | 1 cut(s) | 32 |
| BssT1I | CCWWGG | 1 cut(s) | 548 |
| Bst2BI | CACGAG | 1 cut(s) | 32 |
| Bst2UI | CCWGG | 2 cut(s) | 144, 522 |
| Bst4CI | ACNGT | 2 cut(s) | 91, 139 |
| BstAUI | TGTACA | 1 cut(s) | 86 |
| BstDEI | CTNAG | 2 cut(s) | 24, 186 |
| BstDSI | CCRYGG | 1 cut(s) | 548 |
| BstEII | GGTNACC | 1 cut(s) | 167 |
| BstMAI | GTCTC | 1 cut(s) | 64 |
| BstNI | CCWGG | 2 cut(s) | 144, 522 |
| BstPI | GGTNACC | 1 cut(s) | 167 |
| BstSCI | CCNGG | 2 cut(s) | 142, 520 |
| BstSFI | CTRYAG | 1 cut(s) | 126 |
| BstV1I | GCAGC | 2 cut(s) | 112, 140 |
| BsuRI | GGCC | 2 cut(s) | 333, 422 |
| BtgI | CCRYGG | 1 cut(s) | 548 |
| CaiI | CAGNNNCTG | 1 cut(s) | 143 |
| Cfr13I | GGNCC | 2 cut(s) | 420, 518 |
| Csp6I | GTAC | 1 cut(s) | 87 |
| CviAII | CATG | 4 cut(s) | 11, 364, 417, 549 |
| CviJI | RGCY | 4 cut(s) | 185, 333, 422, 542 |
| CviKI_1 | RGCY | 4 cut(s) | 185, 333, 422, 542 |
| CviQI | GTAC | 1 cut(s) | 87 |
| DdeI | CTNAG | 2 cut(s) | 24, 186 |
| Eco130I | CCWWGG | 1 cut(s) | 548 |
| Eco147I | AGGCCT | 1 cut(s) | 333 |
| Eco47I | GGWCC | 1 cut(s) | 518 |
| Eco57I | CTGAAG | 2 cut(s) | 231, 323 |
| Eco91I | GGTNACC | 1 cut(s) | 167 |
| EcoO65I | GGTNACC | 1 cut(s) | 167 |
| EcoRII | CCWGG | 2 cut(s) | 142, 520 |
| EcoT14I | CCWWGG | 1 cut(s) | 548 |
| ErhI | CCWWGG | 1 cut(s) | 548 |
| FaeI | CATG | 4 cut(s) | 14, 367, 420, 552 |
| FaqI | GGGAC | 1 cut(s) | 85 |
| FatI | CATG | 4 cut(s) | 10, 363, 416, 548 |
| Fnu4HI | GCNGC | 2 cut(s) | 126, 129 |
| Fsp4HI | GCNGC | 2 cut(s) | 126, 129 |
| FspBI | CTAG | 2 cut(s) | 182, 447 |
| GluI | GCNGC | 2 cut(s) | 126, 129 |
| HaeIII | GGCC | 2 cut(s) | 333, 422 |
| Hin1II | CATG | 4 cut(s) | 14, 367, 420, 552 |
| HincII | GTYRAC | 1 cut(s) | 510 |
| HindII | GTYRAC | 1 cut(s) | 510 |
| HinfI | GANTC | 2 cut(s) | 28, 267 |
| Hpy166II | GTNNAC | 1 cut(s) | 510 |
| Hpy188I | TCNGA | 3 cut(s) | 217, 303, 563 |
| Hpy188III | TCNNGA | 1 cut(s) | 32 |
| Hpy8I | GTNNAC | 1 cut(s) | 510 |
| HpyCH4III | ACNGT | 2 cut(s) | 91, 139 |
| HpyCH4IV | ACGT | 1 cut(s) | 280 |
| HpyCH4V | TGCA | 4 cut(s) | 128, 287, 435, 478 |
| HpyF3I | CTNAG | 2 cut(s) | 24, 186 |
| HpySE526I | ACGT | 1 cut(s) | 280 |
| Hsp92II | CATG | 4 cut(s) | 14, 367, 420, 552 |
| LpnPI | CCDG | 8 cut(s) | 129, 150, 156, 185, 468, 490, 507, 534 |
| Lsp1109I | GCAGC | 2 cut(s) | 112, 140 |
| MaeI | CTAG | 2 cut(s) | 182, 447 |
| MaeII | ACGT | 1 cut(s) | 280 |
| MaeIII | GTNAC | 2 cut(s) | 109, 167 |
| MboII | GAAGA | 4 cut(s) | 228, 316, 372, 419 |
| MhlI | GDGCHC | 1 cut(s) | 103 |
| MluCI | AATT | 3 cut(s) | 210, 307, 479 |
| MnlI | CCTC | 5 cut(s) | 40, 43, 281, 398, 472 |
| MseI | TTAA | 3 cut(s) | 402, 492, 555 |
| MslI | CAYNNNNRTG | 3 cut(s) | 365, 395, 469 |
| MspR9I | CCNGG | 2 cut(s) | 144, 522 |
| MvaI | CCWGG | 2 cut(s) | 144, 522 |
| NcoI | CCATGG | 1 cut(s) | 548 |
| NlaIII | CATG | 4 cut(s) | 14, 367, 420, 552 |
| PceI | AGGCCT | 1 cut(s) | 333 |
| PfeI | GAWTC | 2 cut(s) | 28, 267 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 549 |
| PkrI | GCNGC | 2 cut(s) | 127, 130 |
| Psp6I | CCWGG | 2 cut(s) | 142, 520 |
| PspEI | GGTNACC | 1 cut(s) | 167 |
| PspGI | CCWGG | 2 cut(s) | 142, 520 |
| PspPI | GGNCC | 2 cut(s) | 420, 518 |
| PstI | CTGCAG | 1 cut(s) | 130 |
| PstNI | CAGNNNCTG | 1 cut(s) | 143 |
| RsaI | GTAC | 1 cut(s) | 88 |
| RsaNI | GTAC | 1 cut(s) | 87 |
| RseI | CAYNNNNRTG | 3 cut(s) | 365, 395, 469 |
| SaqAI | TTAA | 3 cut(s) | 402, 492, 555 |
| SatI | GCNGC | 2 cut(s) | 126, 129 |
| Sau96I | GGNCC | 2 cut(s) | 420, 518 |
| ScrFI | CCNGG | 2 cut(s) | 144, 522 |
| SduI | GDGCHC | 1 cut(s) | 103 |
| SetI | ASST | 4 cut(s) | 100, 169, 187, 283 |
| SfcI | CTRYAG | 1 cut(s) | 126 |
| SinI | GGWCC | 1 cut(s) | 518 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 365, 395, 469 |
| Sse9I | AATT | 3 cut(s) | 210, 307, 479 |
| SseBI | AGGCCT | 1 cut(s) | 333 |
| SspI | AATATT | 1 cut(s) | 528 |
| SspMI | CTAG | 2 cut(s) | 182, 447 |
| StuI | AGGCCT | 1 cut(s) | 333 |
| StyD4I | CCNGG | 2 cut(s) | 142, 520 |
| StyI | CCWWGG | 1 cut(s) | 548 |
| TaaI | ACNGT | 2 cut(s) | 91, 139 |
| TaiI | ACGT | 1 cut(s) | 283 |
| TasI | AATT | 3 cut(s) | 210, 307, 479 |
| TatI | WGTACW | 1 cut(s) | 86 |
| TfiI | GAWTC | 2 cut(s) | 28, 267 |
| Tru1I | TTAA | 3 cut(s) | 402, 492, 555 |
| Tru9I | TTAA | 3 cut(s) | 402, 492, 555 |
| TseI | GCWGC | 2 cut(s) | 125, 128 |
| TspDTI | ATGAA | 4 cut(s) | 27, 80, 196, 420 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 549 |
| VpaK11BI | GGWCC | 1 cut(s) | 518 |
| XapI | RAATTY | 1 cut(s) | 307 |
| XspI | CTAG | 2 cut(s) | 182, 447 |