protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 2 - 92 | 2.5e-08 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 424 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 348 |
| AflIII | ACRYGT | 1 cut(s) | 56 |
| AgsI | TTSAA | 3 cut(s) | 93, 120, 410 |
| AjiI | CACGTC | 1 cut(s) | 156 |
| AoxI | GGCC | 2 cut(s) | 211, 265 |
| ApoI | RAATTY | 1 cut(s) | 424 |
| AsuHPI | GGTGA | 1 cut(s) | 211 |
| AsuNHI | GCTAGC | 1 cut(s) | 319 |
| AxyI | CCTNAGG | 1 cut(s) | 66 |
| BbsI | GAAGAC | 1 cut(s) | 53 |
| BccI | CCATC | 1 cut(s) | 278 |
| BfaI | CTAG | 2 cut(s) | 320, 332 |
| BmgBI | CACGTC | 1 cut(s) | 156 |
| BmsI | GCATC | 1 cut(s) | 342 |
| BmtI | GCTAGC | 1 cut(s) | 323 |
| BpiI | GAAGAC | 1 cut(s) | 53 |
| Bsa29I | ATCGAT | 2 cut(s) | 296, 380 |
| BsaJI | CCNNGG | 1 cut(s) | 126 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 348 |
| Bse118I | RCCGGY | 1 cut(s) | 323 |
| Bse21I | CCTNAGG | 1 cut(s) | 66 |
| BseCI | ATCGAT | 2 cut(s) | 296, 380 |
| BseDI | CCNNGG | 1 cut(s) | 126 |
| BseGI | GGATG | 1 cut(s) | 357 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 348 |
| BshFI | GGCC | 2 cut(s) | 213, 267 |
| BshVI | ATCGAT | 2 cut(s) | 296, 380 |
| BsiSI | CCGG | 1 cut(s) | 324 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 348 |
| BsnI | GGCC | 2 cut(s) | 213, 267 |
| BspANI | GGCC | 2 cut(s) | 213, 267 |
| BspDI | ATCGAT | 2 cut(s) | 296, 380 |
| BspOI | GCTAGC | 1 cut(s) | 323 |
| BsrFI | RCCGGY | 1 cut(s) | 323 |
| BssAI | RCCGGY | 1 cut(s) | 323 |
| BssECI | CCNNGG | 1 cut(s) | 126 |
| BstC8I | GCNNGC | 1 cut(s) | 321 |
| BstDEI | CTNAG | 1 cut(s) | 66 |
| BstF5I | GGATG | 1 cut(s) | 357 |
| BstNSI | RCATGY | 1 cut(s) | 60 |
| BstV2I | GAAGAC | 1 cut(s) | 53 |
| Bsu15I | ATCGAT | 2 cut(s) | 296, 380 |
| Bsu36I | CCTNAGG | 1 cut(s) | 66 |
| BsuRI | GGCC | 2 cut(s) | 213, 267 |
| BsuTUI | ATCGAT | 2 cut(s) | 296, 380 |
| BtrI | CACGTC | 1 cut(s) | 156 |
| BtsCI | GGATG | 1 cut(s) | 357 |
| Cac8I | GCNNGC | 1 cut(s) | 321 |
| Cfr10I | RCCGGY | 1 cut(s) | 323 |
| ClaI | ATCGAT | 2 cut(s) | 296, 380 |
| CviAII | CATG | 3 cut(s) | 57, 136, 244 |
| CviJI | RGCY | 3 cut(s) | 213, 267, 323 |
| CviKI_1 | RGCY | 3 cut(s) | 213, 267, 323 |
| DdeI | CTNAG | 1 cut(s) | 66 |
| Eco147I | AGGCCT | 1 cut(s) | 213 |
| Eco81I | CCTNAGG | 1 cut(s) | 66 |
| FaeI | CATG | 3 cut(s) | 60, 139, 247 |
| FaiI | YATR | 7 cut(s) | 20, 58, 86, 137, 245, 347, 349 |
| FatI | CATG | 3 cut(s) | 56, 135, 243 |
| FauNDI | CATATG | 1 cut(s) | 347 |
| FokI | GGATG | 1 cut(s) | 364 |
| FspBI | CTAG | 2 cut(s) | 320, 332 |
| HaeIII | GGCC | 2 cut(s) | 213, 267 |
| HapII | CCGG | 1 cut(s) | 324 |
| Hin1II | CATG | 3 cut(s) | 60, 139, 247 |
| HpaII | CCGG | 1 cut(s) | 324 |
| HphI | GGTGA | 1 cut(s) | 211 |
| Hpy188III | TCNNGA | 1 cut(s) | 281 |
| HpyAV | CCTTC | 3 cut(s) | 352, 390, 404 |
| HpyCH4IV | ACGT | 1 cut(s) | 155 |
| HpyCH4V | TGCA | 2 cut(s) | 98, 355 |
| HpyF3I | CTNAG | 1 cut(s) | 66 |
| HpySE526I | ACGT | 1 cut(s) | 155 |
| Hsp92II | CATG | 3 cut(s) | 60, 139, 247 |
| LpnPI | CCDG | 2 cut(s) | 195, 337 |
| LweI | GCATC | 1 cut(s) | 342 |
| MaeI | CTAG | 2 cut(s) | 320, 332 |
| MaeII | ACGT | 1 cut(s) | 155 |
| MaeIII | GTNAC | 1 cut(s) | 156 |
| MboII | GAAGA | 1 cut(s) | 53 |
| MluCI | AATT | 2 cut(s) | 356, 424 |
| MnlI | CCTC | 3 cut(s) | 136, 233, 349 |
| MslI | CAYNNNNRTG | 3 cut(s) | 200, 245, 350 |
| MspI | CCGG | 1 cut(s) | 324 |
| NdeI | CATATG | 1 cut(s) | 347 |
| NheI | GCTAGC | 1 cut(s) | 319 |
| NlaIII | CATG | 3 cut(s) | 60, 139, 247 |
| NmuCI | GTSAC | 1 cut(s) | 156 |
| NspI | RCATGY | 1 cut(s) | 60 |
| PceI | AGGCCT | 1 cut(s) | 213 |
| PciI | ACATGT | 1 cut(s) | 56 |
| PscI | ACATGT | 1 cut(s) | 56 |
| RseI | CAYNNNNRTG | 3 cut(s) | 200, 245, 350 |
| SetI | ASST | 3 cut(s) | 72, 128, 158 |
| SfaNI | GCATC | 1 cut(s) | 342 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 200, 245, 350 |
| Sse9I | AATT | 2 cut(s) | 356, 424 |
| SseBI | AGGCCT | 1 cut(s) | 213 |
| SspI | AATATT | 1 cut(s) | 405 |
| SspMI | CTAG | 2 cut(s) | 320, 332 |
| StuI | AGGCCT | 1 cut(s) | 213 |
| TaiI | ACGT | 1 cut(s) | 158 |
| TaqI | TCGA | 2 cut(s) | 296, 380 |
| TasI | AATT | 2 cut(s) | 356, 424 |
| TseFI | GTSAC | 1 cut(s) | 156 |
| Tsp45I | GTSAC | 1 cut(s) | 156 |
| TspDTI | ATGAA | 3 cut(s) | 7, 54, 334 |
| TspGWI | ACGGA | 1 cut(s) | 351 |
| XapI | RAATTY | 1 cut(s) | 424 |
| XceI | RCATGY | 1 cut(s) | 60 |
| XspI | CTAG | 2 cut(s) | 320, 332 |