RLG00000000811

protein ubiquitination

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000027
Physical Location & Seq
Forward (+)
5829684 .. 5841486
11803 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000811

Sequence Viewer

Length: 1836 bp
ATGCTGCATCCCATAGCTGCAACCCCACGCCTCAACTGCGACACCTCGTCCTTCGCAGCCACCTTGCTGCAAGTCACGCTGCCACGGTCAAAAACGCAATTCCAAAGTCTCGACCCTGATCAGGGGTGCAATATATTTCTAATCGATGTTTATATGGATACAATTCCAGGCACTGGAGTTTTCGATCTTCACCAAGCAGCCATGGAAGGAAACGTGGATGAGGTGAAACGGTTGTTGCCGTCCGCCATAGAAAATGACTTGAAAAAAAAAGACGGCATTAGTAGTCGGACAGCTTTAGATACTGTTGTAGTTGCATCGTGTGCAAAAGAACACTGGATCCAAATAGCTACAGACATGGCAATAAAGCACCGGGAAATACTTCAAATCCGTAGTTGGCCCGGCAAGTATATTCCAGTTGTGAGGGCCTGTAGTCGAAACAAATGGGAAATGGCACGTTGTCTCTATAAACACACTCCCAGTGAGGCTCTACTGAGCGACAATGGAATGTCGGGTGCTCAAATTATTAGAATGGCTATATGGCGACCCGATGGACTTGATGTTGCATGGGACTTAATACAAAAACATCCAAAGTTGGCCATGGCTGACGACGGACTTGAACAGCAGCCTATGCTTGTATTGGCTGGCAACCGCAGGGCATTTAAAAGCGGAGCGCGACTAACATTGTGGCAAAAATTAATCTACGAGAGTATAAAGATAAAATCTATTGGGCTTACTATTCCCGAGAGCCGTATTAATGTCTCAGAATCTGAAGATGAACCATCTCCAAAAAATATATCAGAAGCTGATCAACGTCATCAGAGGAATCTATTATGCTCAGTTATGGATTTTTTCAGAAGAGTTATTATGGATGCCTCTAAGCTTTTGGGAATCAATGACGTGTATGAAATGAAATCAAACCATTTGCAGTTTGATAAATTTCTAAGCTGTATGGTAGAAGTGATAAAAGATCTGGATAAGTTTACAAAGGAAGAACGTAATGTCGTGAAAACTTCACTCTTCAAAGCTGTTGAACAAGGACATGTTGAATTTATTGAGCATATGCTTAAAGCAAAGCTAGAAATCGTGGATATCTTTGATGACAAAAAGAGGAGTATATTTCAATATGCCATTGAATGTCGTCAAGAAAAGATTTATAATATTATATATAAGCTCGAGGAAGCAAAGAGAGACGATATTATGCATAATATAGCAAAGTTCCGGACTAATATGCTACACAGTGCAGCAAACTTATTCCCAGTTACACATTTTAACCATATTCAAGGTGCAAGTTTGCAAATGCAACGCGAACTACAATGGTTCAAGGAGGTTGAGAGTATGTTACCTAGTGAAATGCATGAATTTCCCAATACTTCAAACTTGACAGCACGTGAACTATTTACCAAGAACCACAAGAAATTAAAGGATGACGCAGAAATAGCCATGAAAGGGACTGCAGCTTCTTCTACAACTGTAGCCTATACCCAAAAAGCCCACGAGGCTGAAGGCCCGGATGGAGTGGGCCTCCATGACCCGCATGACGCACTCGGCATGGAATGTTTCGGAGCGGTCTGGGCGGGTGGTGGAAGAGTCACCGAAAAAGACGTGGTCGGGGACGTAGACGTTATAGTGAGGGGTGACGTGGCGGATGAGGTCAGCGAACTGCCACATTGCGTTGACGCCGAGGCCGTGGAGGAGGAGGAGGAGGAGGATGGGTTTGGAGGGGTTGGGGGATTTGGGGACCCAGCAGTGCATGGTGGTGCCGCCGTCTTTGAGGTCCGTGACGGTGGACCGGAGGCCGGCCCGGATGAAGTTGGACCGGAAGCAGGAGTTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

612

Amino Acids

68.24

Weight (kDa)

5.34

Isoelectric Point (pI)

43.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1155
AccB1I GGYRCC 1 cut(s) 1757
AccB7I CCANNNNNTGG 1 cut(s) 173
AccBSI CCGCTC 1 cut(s) 1565
AccI GTMKAC 1 cut(s) 1617
AccII CGCG 2 cut(s) 673, 1305
AccIII TCCGGA 1 cut(s) 1218
AciI CCGC 8 cut(s) 243, 649, 666, 1532, 1565, 1574, 1643, 1761
AclWI GGATC 2 cut(s) 331, 344
AcoI YGGCCR 1 cut(s) 594
AcsI RAATTY 3 cut(s) 935, 1046, 1358
AcuI CTGAAG 2 cut(s) 789, 1521
AcvI CACGTG 1 cut(s) 1388
AcyI GRCGYC 1 cut(s) 1677
AfiI CCNNNNNNNGG 6 cut(s) 121, 122, 173, 1446, 1796, 1823
AflIII ACRYGT 2 cut(s) 897, 1039
AhdI GACNNNNNGTC 1 cut(s) 46
AjiI CACGTC 3 cut(s) 898, 1603, 1639
AjnI CCWGG 1 cut(s) 166
AloI GAACNNNNNNTCC 2 cut(s) 321, 353
Alw21I GWGCWC 1 cut(s) 517
Alw26I GTCTC 4 cut(s) 113, 464, 763, 1182
AlwI GGATC 2 cut(s) 331, 344
AlwNI CAGNNNCTG 3 cut(s) 173, 767, 803
Ama87I CYCGRG 2 cut(s) 740, 1172
Aor13HI TCCGGA 1 cut(s) 1218
AoxI GGCC 8 cut(s) 395, 423, 594, 1504, 1519, 1683, 1794, 1798
ApeKI GCWGC 9 cut(s) 4, 17, 56, 67, 79, 197, 622, 1241, 1454
ApoI RAATTY 3 cut(s) 935, 1046, 1358
AseI ATTAAT 2 cut(s) 695, 753
Asp700I GAANNNNTTC 1 cut(s) 378
AspLEI GCGC 1 cut(s) 673
AspS9I GGNCC 9 cut(s) 396, 423, 1505, 1519, 1738, 1774, 1787, 1799, 1814
AsuC2I CCSGG 4 cut(s) 371, 399, 1508, 1802
AsuHPI GGTGA 4 cut(s) 182, 235, 1582, 1646
AvaI CYCGRG 2 cut(s) 740, 1172
AvaII GGWCC 4 cut(s) 1738, 1774, 1787, 1814
BaeI ACNNNNGTAYC 2 cut(s) 291, 324
BalI TGGCCA 1 cut(s) 596
BamHI GGATCC 1 cut(s) 336
BanI GGYRCC 1 cut(s) 1757
BauI CACGAG 1 cut(s) 1493
BbrPI CACGTG 1 cut(s) 1388
Bbv12I GWGCWC 1 cut(s) 517
BbvI GCAGC 8 cut(s) 4, 54, 66, 68, 209, 634, 1253, 1466
BccI CCATC 4 cut(s) 542, 787, 1505, 1703
BceAI ACGGC 5 cut(s) 223, 289, 732, 1670, 1748
BciT130I CCWGG 1 cut(s) 168
BciVI GTATCC 1 cut(s) 151
BclI TGATCA 2 cut(s) 118, 805
BcnI CCSGG 4 cut(s) 371, 399, 1508, 1802
BcoDI GTCTC 4 cut(s) 113, 464, 763, 1182
BfaI CTAG 2 cut(s) 1076, 1344
BfmI CTRYAG 4 cut(s) 348, 427, 1452, 1470
BfuI GTATCC 1 cut(s) 151
BglI GCCNNNNNGGC 1 cut(s) 1496
BglII AGATCT 1 cut(s) 967
Bme1390I CCNGG 5 cut(s) 168, 371, 399, 1508, 1802
Bme18I GGWCC 4 cut(s) 1738, 1774, 1787, 1814
BmeRI GACNNNNNGTC 1 cut(s) 46
BmeT110I CYCGRG 2 cut(s) 740, 1172
BmgBI CACGTC 3 cut(s) 898, 1603, 1639
BmgT120I GGNCC 9 cut(s) 396, 423, 1505, 1519, 1738, 1774, 1787, 1799, 1814
BmiI GGNNCC 4 cut(s) 338, 1739, 1740, 1759
BmrFI CCNGG 5 cut(s) 168, 371, 399, 1508, 1802
BmrI ACTGGG 2 cut(s) 471, 1250
BmsI GCATC 3 cut(s) 16, 323, 859
BmuI ACTGGG 2 cut(s) 471, 1250
BplI GAGNNNNNCTC 2 cut(s) 1506, 1538
BpmI CTGGAG 1 cut(s) 195
BpuMI CCSGG 4 cut(s) 371, 399, 1508, 1802
Bsa29I ATCGAT 1 cut(s) 144
BsaAI YACGTR 1 cut(s) 1388
BsaHI GRCGYC 1 cut(s) 1677
BsaJI CCNNGG 5 cut(s) 83, 201, 597, 1680, 1686
BsaWI WCCGGW 3 cut(s) 1218, 1789, 1816
BsaXI ACNNNNNCTCC 2 cut(s) 1697, 1727
Bsc4I CCNNNNNNNGG 6 cut(s) 121, 122, 173, 1446, 1796, 1823
Bse118I RCCGGY 1 cut(s) 1796
Bse1I ACTGG 5 cut(s) 178, 338, 413, 477, 1256
Bse3DI GCAATG 1 cut(s) 1666
BseAI TCCGGA 1 cut(s) 1218
BseBI CCWGG 1 cut(s) 168
BseCI ATCGAT 1 cut(s) 144
BseDI CCNNGG 5 cut(s) 83, 201, 597, 1680, 1686
BseGI GGATG 9 cut(s) 7, 223, 583, 874, 1429, 1516, 1651, 1714, 1810
BseLI CCNNNNNNNGG 6 cut(s) 121, 122, 173, 1446, 1796, 1823
BseMI GCAATG 1 cut(s) 1666
BseMII CTCAG 3 cut(s) 482, 774, 849
BseNI ACTGG 5 cut(s) 178, 338, 413, 477, 1256
BseRI GAGGAG 6 cut(s) 1123, 1706, 1709, 1712, 1715, 1718
BseXI GCAGC 8 cut(s) 4, 54, 66, 68, 209, 634, 1253, 1466
BseYI CCCAGC 1 cut(s) 1741
BsgI GTGCAG 1 cut(s) 1260
Bsh1236I CGCG 2 cut(s) 673, 1305
BshFI GGCC 8 cut(s) 397, 425, 596, 1506, 1521, 1685, 1796, 1800
BshNI GGYRCC 1 cut(s) 1757
BshVI ATCGAT 1 cut(s) 144
BsiHKAI GWGCWC 1 cut(s) 517
BsiHKCI CYCGRG 2 cut(s) 740, 1172
BsiSI CCGG 8 cut(s) 370, 399, 1219, 1508, 1790, 1797, 1802, 1817
BslFI GGGAC 4 cut(s) 581, 1462, 1625, 1751
BslI CCNNNNNNNGG 6 cut(s) 121, 122, 173, 1446, 1796, 1823
BsmAI GTCTC 4 cut(s) 113, 464, 763, 1182
BsmBI CGTCTC 1 cut(s) 1182
BsmFI GGGAC 4 cut(s) 581, 1462, 1625, 1751
BsnI GGCC 8 cut(s) 397, 425, 596, 1506, 1521, 1685, 1796, 1800
BsoBI CYCGRG 2 cut(s) 740, 1172
Bsp1286I GDGCHC 1 cut(s) 517
Bsp13I TCCGGA 1 cut(s) 1218
Bsp143I GATC 5 cut(s) 118, 184, 336, 805, 967
Bsp19I CCATGG 2 cut(s) 201, 597
BspACI CCGC 8 cut(s) 243, 649, 666, 1532, 1565, 1574, 1643, 1761
BspANI GGCC 8 cut(s) 397, 425, 596, 1506, 1521, 1685, 1796, 1800
BspCNI CTCAG 3 cut(s) 483, 773, 848
BspDI ATCGAT 1 cut(s) 144
BspEI TCCGGA 1 cut(s) 1218
BspFNI CGCG 2 cut(s) 673, 1305
BspLI GGNNCC 4 cut(s) 338, 1739, 1740, 1759
BspMAI CTGCAG 1 cut(s) 1456
BspPI GGATC 2 cut(s) 331, 344
BspT107I GGYRCC 1 cut(s) 1757
BsrBI CCGCTC 1 cut(s) 1565
BsrDI GCAATG 1 cut(s) 1666
BsrFI RCCGGY 1 cut(s) 1796
BsrI ACTGG 5 cut(s) 178, 338, 413, 477, 1256
BssAI RCCGGY 1 cut(s) 1796
BssECI CCNNGG 5 cut(s) 83, 201, 597, 1680, 1686
BssMI GATC 5 cut(s) 118, 184, 336, 805, 967
BssNI GRCGYC 1 cut(s) 1677
BssSI CACGAG 1 cut(s) 1493
BssT1I CCWWGG 2 cut(s) 201, 597
Bst2BI CACGAG 1 cut(s) 1493
Bst2UI CCWGG 1 cut(s) 168
Bst4CI ACNGT 6 cut(s) 87, 231, 304, 1238, 1471, 1784
Bst6I CTCTTC 3 cut(s) 850, 1022, 1579
BstACI GRCGYC 1 cut(s) 1677
BstAPI GCANNNNNTGC 2 cut(s) 320, 628
BstBAI YACGTR 1 cut(s) 1388
BstC8I GCNNGC 2 cut(s) 643, 1798
BstDEI CTNAG 5 cut(s) 491, 760, 835, 876, 941
BstDSI CCRYGG 4 cut(s) 83, 201, 597, 1686
BstF5I GGATG 9 cut(s) 7, 223, 583, 874, 1429, 1516, 1651, 1714, 1810
BstFNI CGCG 2 cut(s) 673, 1305
BstHHI GCGC 1 cut(s) 673
BstKTI GATC 5 cut(s) 121, 187, 339, 808, 970
BstMAI GTCTC 4 cut(s) 113, 464, 763, 1182
BstMBI GATC 5 cut(s) 118, 184, 336, 805, 967
BstMWI GCNNNNNNNGC 7 cut(s) 36, 76, 320, 628, 1436, 1496, 1571
BstNI CCWGG 1 cut(s) 168
BstNSI RCATGY 1 cut(s) 1043
BstSCI CCNGG 5 cut(s) 166, 369, 397, 1506, 1800
BstSFI CTRYAG 4 cut(s) 348, 427, 1452, 1470
BstUI CGCG 2 cut(s) 673, 1305
BstV1I GCAGC 8 cut(s) 4, 54, 66, 68, 209, 634, 1253, 1466
BstX2I RGATCY 2 cut(s) 336, 967
BstYI RGATCY 2 cut(s) 336, 967
Bsu15I ATCGAT 1 cut(s) 144
BsuI GTATCC 1 cut(s) 151
BsuRI GGCC 8 cut(s) 397, 425, 596, 1506, 1521, 1685, 1796, 1800
BsuTUI ATCGAT 1 cut(s) 144
BtgI CCRYGG 4 cut(s) 83, 201, 597, 1686
BtrI CACGTC 3 cut(s) 898, 1603, 1639
BtsCI GGATG 9 cut(s) 7, 223, 583, 874, 1429, 1516, 1651, 1714, 1810
BtsI GCAGTG 1 cut(s) 1752
BtsIMutI CAGTG 5 cut(s) 171, 331, 484, 1243, 1752
Cac8I GCNNGC 2 cut(s) 643, 1798
CaiI CAGNNNCTG 3 cut(s) 173, 767, 803
CfoI GCGC 1 cut(s) 673
Cfr10I RCCGGY 1 cut(s) 1796
Cfr13I GGNCC 9 cut(s) 396, 423, 1505, 1519, 1738, 1774, 1787, 1799, 1814
ClaI ATCGAT 1 cut(s) 144
CseI GACGC 3 cut(s) 1436, 1547, 1685
DdeI CTNAG 5 cut(s) 491, 760, 835, 876, 941
DpnI GATC 5 cut(s) 120, 186, 338, 807, 969
DpnII GATC 5 cut(s) 118, 184, 336, 805, 967
DraI TTTAAA 1 cut(s) 661
DriI GACNNNNNGTC 1 cut(s) 46
EaeI YGGCCR 1 cut(s) 594
Eam1104I CTCTTC 3 cut(s) 850, 1022, 1579
Eam1105I GACNNNNNGTC 1 cut(s) 46
EarI CTCTTC 3 cut(s) 850, 1022, 1579
EciI GGCGGA 2 cut(s) 232, 1658
Eco130I CCWWGG 2 cut(s) 201, 597
Eco32I GATATC 1 cut(s) 1090
Eco47I GGWCC 4 cut(s) 1738, 1774, 1787, 1814
Eco57I CTGAAG 2 cut(s) 789, 1521
Eco72I CACGTG 1 cut(s) 1388
Eco88I CYCGRG 2 cut(s) 740, 1172
EcoO109I RGGNCCY 2 cut(s) 423, 1738
EcoRII CCWGG 1 cut(s) 166
EcoRV GATATC 1 cut(s) 1090
EcoT14I CCWWGG 2 cut(s) 201, 597
EcoT22I ATGCAT 2 cut(s) 1203, 1356
ErhI CCWWGG 2 cut(s) 201, 597
Esp3I CGTCTC 1 cut(s) 1182
FaqI GGGAC 4 cut(s) 581, 1462, 1625, 1751
FauI CCCGC 2 cut(s) 1539, 1567
FauNDI CATATG 1 cut(s) 1059
FbaI TGATCA 2 cut(s) 118, 805
FblI GTMKAC 1 cut(s) 1617
FokI GGATG 8 cut(s) 230, 570, 881, 1436, 1523, 1658, 1721, 1817
FseI GGCCGGCC 1 cut(s) 1800
FspBI CTAG 2 cut(s) 1076, 1344
GlaI GCGC 1 cut(s) 672
GsaI CCCAGC 1 cut(s) 1745
GsuI CTGGAG 1 cut(s) 195
HaeIII GGCC 8 cut(s) 397, 425, 596, 1506, 1521, 1685, 1796, 1800
HapII CCGG 8 cut(s) 370, 399, 1219, 1508, 1790, 1797, 1802, 1817
HgaI GACGC 3 cut(s) 1436, 1547, 1685
HhaI GCGC 1 cut(s) 673
Hin1I GRCGYC 1 cut(s) 1677
Hin6I GCGC 1 cut(s) 671
HinP1I GCGC 1 cut(s) 671
HincII GTYRAC 1 cut(s) 1675
HindII GTYRAC 1 cut(s) 1675
HindIII AAGCTT 1 cut(s) 878
HinfI GANTC 4 cut(s) 764, 823, 888, 1587
HpaII CCGG 8 cut(s) 370, 399, 1219, 1508, 1790, 1797, 1802, 1817
HphI GGTGA 4 cut(s) 182, 235, 1582, 1646
Hpy166II GTNNAC 5 cut(s) 981, 1391, 1618, 1675, 1787
Hpy188I TCNGA 7 cut(s) 288, 763, 769, 799, 819, 854, 1562
Hpy188III TCNNGA 6 cut(s) 110, 740, 971, 1003, 1142, 1219
Hpy8I GTNNAC 5 cut(s) 981, 1391, 1618, 1675, 1787
Hpy99I CGWCG 1 cut(s) 611
HpyAV CCTTC 3 cut(s) 61, 200, 1496
HpyCH4III ACNGT 6 cut(s) 87, 231, 304, 1238, 1471, 1784
HpyF10VI GCNNNNNNNGC 7 cut(s) 36, 76, 320, 628, 1436, 1496, 1571
HpyF3I CTNAG 5 cut(s) 491, 760, 835, 876, 941
Hsp92I GRCGYC 1 cut(s) 1677
HspAI GCGC 1 cut(s) 671
KflI GGGWCCC 1 cut(s) 1738
Kpn2I TCCGGA 1 cut(s) 1218
KroI GCCGGC 1 cut(s) 1796
KroNI GCCGGC 1 cut(s) 1798
Ksp22I TGATCA 2 cut(s) 118, 805
Kzo9I GATC 5 cut(s) 118, 184, 336, 805, 967
LmnI GCTCC 2 cut(s) 668, 1562
Lsp1109I GCAGC 8 cut(s) 4, 54, 66, 68, 209, 634, 1253, 1466
LweI GCATC 3 cut(s) 16, 323, 859
MaeI CTAG 2 cut(s) 1076, 1344
MaeIII GTNAC 6 cut(s) 73, 1258, 1338, 1588, 1634, 1778
MalI GATC 5 cut(s) 120, 186, 338, 807, 969
MbiI CCGCTC 1 cut(s) 1565
MboI GATC 5 cut(s) 118, 184, 336, 805, 967
MboII GAAGA 7 cut(s) 179, 782, 867, 1001, 1009, 1452, 1596
MflI RGATCY 2 cut(s) 336, 967
MhlI GDGCHC 1 cut(s) 517
MlsI TGGCCA 1 cut(s) 596
MluCI AATT 8 cut(s) 98, 162, 519, 692, 935, 1046, 1358, 1415
MluNI TGGCCA 1 cut(s) 596
MlyI GAGTC 1 cut(s) 1596
MmeI TCCRAC 2 cut(s) 266, 1792
Mox20I TGGCCA 1 cut(s) 596
Mph1103I ATGCAT 2 cut(s) 1203, 1356
MroI TCCGGA 1 cut(s) 1218
MroNI GCCGGC 1 cut(s) 1796
MroXI GAANNNNTTC 1 cut(s) 378
MscI TGGCCA 1 cut(s) 596
MseI TTAA 7 cut(s) 572, 660, 695, 753, 1065, 1269, 1418
MslI CAYNNNNRTG 1 cut(s) 1755
Msp20I TGGCCA 1 cut(s) 596
MspI CCGG 8 cut(s) 370, 399, 1219, 1508, 1790, 1797, 1802, 1817
MspR9I CCNGG 5 cut(s) 168, 371, 399, 1508, 1802
MvaI CCWGG 1 cut(s) 168
MvnI CGCG 2 cut(s) 673, 1305
MwoI GCNNNNNNNGC 7 cut(s) 36, 76, 320, 628, 1436, 1496, 1571
NaeI GCCGGC 1 cut(s) 1798
NciI CCSGG 4 cut(s) 371, 399, 1508, 1802
NcoI CCATGG 2 cut(s) 201, 597
NdeI CATATG 1 cut(s) 1059
NdeII GATC 5 cut(s) 118, 184, 336, 805, 967
NgoMIV GCCGGC 1 cut(s) 1796
NlaIV GGNNCC 4 cut(s) 338, 1739, 1740, 1759
NmeAIII GCCGAG 2 cut(s) 1524, 1705
NmuCI GTSAC 4 cut(s) 73, 1588, 1634, 1778
NsiI ATGCAT 2 cut(s) 1203, 1356
NspI RCATGY 1 cut(s) 1043
PaeR7I CTCGAG 1 cut(s) 1172
PciI ACATGT 1 cut(s) 1039
PcsI WCGNNNNNNNCGW 1 cut(s) 1683
PdiI GCCGGC 1 cut(s) 1798
PdmI GAANNNNTTC 1 cut(s) 378
PfeI GAWTC 3 cut(s) 764, 823, 888
PflFI GACNNNGTC 1 cut(s) 1604
PflMI CCANNNNNTGG 1 cut(s) 173
PleI GAGTC 1 cut(s) 1595
PmaCI CACGTG 1 cut(s) 1388
PmlI CACGTG 1 cut(s) 1388
PpsI GAGTC 1 cut(s) 1595
Ppu21I YACGTR 1 cut(s) 1388
PpuMI RGGWCCY 1 cut(s) 1738
PscI ACATGT 1 cut(s) 1039
PshBI ATTAAT 2 cut(s) 695, 753
PsiI TTATAA 1 cut(s) 1155
Psp5II RGGWCCY 1 cut(s) 1738
Psp6I CCWGG 1 cut(s) 166
PspCI CACGTG 1 cut(s) 1388
PspFI CCCAGC 1 cut(s) 1741
PspGI CCWGG 1 cut(s) 166
PspN4I GGNNCC 4 cut(s) 338, 1739, 1740, 1759
PspPI GGNCC 9 cut(s) 396, 423, 1505, 1519, 1738, 1774, 1787, 1799, 1814
PspPPI RGGWCCY 1 cut(s) 1738
PspXI VCTCGAGB 1 cut(s) 1172
PstI CTGCAG 1 cut(s) 1456
PstNI CAGNNNCTG 3 cut(s) 173, 767, 803
PsuI RGATCY 2 cut(s) 336, 967
PsyI GACNNNGTC 1 cut(s) 1604
RigI GGCCGGCC 1 cut(s) 1800
RseI CAYNNNNRTG 1 cut(s) 1755
SaqAI TTAA 7 cut(s) 572, 660, 695, 753, 1065, 1269, 1418
Sau3AI GATC 5 cut(s) 118, 184, 336, 805, 967
Sau96I GGNCC 9 cut(s) 396, 423, 1505, 1519, 1738, 1774, 1787, 1799, 1814
SchI GAGTC 1 cut(s) 1596
ScrFI CCNGG 5 cut(s) 168, 371, 399, 1508, 1802
SduI GDGCHC 1 cut(s) 517
SfaNI GCATC 3 cut(s) 16, 323, 859
SfcI CTRYAG 4 cut(s) 348, 427, 1452, 1470
Sfr274I CTCGAG 1 cut(s) 1172
SinI GGWCC 4 cut(s) 1738, 1774, 1787, 1814
SlaI CTCGAG 1 cut(s) 1172
SmiMI CAYNNNNRTG 1 cut(s) 1755
SmlI CTYRAG 1 cut(s) 1172
SmoI CTYRAG 1 cut(s) 1172
Sse9I AATT 8 cut(s) 98, 162, 519, 692, 935, 1046, 1358, 1415
SsiI CCGC 8 cut(s) 243, 649, 666, 1532, 1565, 1574, 1643, 1761
SspI AATATT 1 cut(s) 1159
SspMI CTAG 2 cut(s) 1076, 1344
StyD4I CCNGG 5 cut(s) 166, 369, 397, 1506, 1800
StyI CCWWGG 2 cut(s) 201, 597
TaaI ACNGT 6 cut(s) 87, 231, 304, 1238, 1471, 1784
TaqI TCGA 5 cut(s) 111, 144, 183, 433, 1173
TasI AATT 8 cut(s) 98, 162, 519, 692, 935, 1046, 1358, 1415
TauI GCSGC 1 cut(s) 1763
TfiI GAWTC 3 cut(s) 764, 823, 888
Tru1I TTAA 7 cut(s) 572, 660, 695, 753, 1065, 1269, 1418
Tru9I TTAA 7 cut(s) 572, 660, 695, 753, 1065, 1269, 1418
TscAI CASTG 5 cut(s) 178, 338, 484, 1243, 1752
TseFI GTSAC 4 cut(s) 73, 1588, 1634, 1778
TseI GCWGC 9 cut(s) 4, 17, 56, 67, 79, 197, 622, 1241, 1454
Tsp45I GTSAC 4 cut(s) 73, 1588, 1634, 1778
TspDTI ATGAA 6 cut(s) 789, 918, 923, 1371, 1457, 1821
TspGWI ACGGA 3 cut(s) 377, 624, 1766
TspRI CASTG 5 cut(s) 178, 338, 484, 1243, 1752
Tth111I GACNNNGTC 1 cut(s) 1604
Van91I CCANNNNNTGG 1 cut(s) 173
VpaK11BI GGWCC 4 cut(s) 1738, 1774, 1787, 1814
VspI ATTAAT 2 cut(s) 695, 753
XapI RAATTY 3 cut(s) 935, 1046, 1358
XceI RCATGY 1 cut(s) 1043
XhoI CTCGAG 1 cut(s) 1172
XmiI GTMKAC 1 cut(s) 1617
XmnI GAANNNNTTC 1 cut(s) 378
XspI CTAG 2 cut(s) 1076, 1344
Zsp2I ATGCAT 2 cut(s) 1203, 1356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.