Rw2G046210

Domain of unknown function

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
73512481 .. 73520596
8116 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G046210.1

Sequence Viewer

Length: 2427 bp
ATGGCAGCTACAGTTGTCCCCAGTGCAAATACTATTCTTGAAGTTTTGAACCTATACAACTATGAAGAATGGAGTATTCGGGTTGAAACCTACTTAATTTCTGAAGGTCTTTGGGATGTTGTCAAAGCCACGGTTGAAACTCCCAATGGTGAAACTGAACATATGGAATGGAGGATGAAGAACGCCAAGGCTCTTCATGCAATCCAAAACTCTTGTAGGACTGATGTATTCGGTTTTATCCGTGACATTAGGATGGCAAAGGATGCGTGGGAGACTTTGGAAAAACGGTTGAAGCCGAAAAACACAGATATCGAGGGCATGGCAGCTACACTAGACCCTAGTGTAATGATTAACCTTAAAGCTCTTAACCAAGACACCTATAAGCAATGGAGCTTTCGGGTGAAAACATACTTGCTGGCTGAAGATTTGTGGGACGTTGTCAAAGGCACAAAAGAACCTCCAAAACTAGAAGACGGGGAAGGGGAAGCTGAATTCATGGTTTGGTGGAAAAATAATGCCAGGGCCTTGCATGTTATCACCATATTTTGCGGGGAGGATGCTGGGTCTTCTATTAGTAACATTAAGACGGCGAAAGATGCCTGGAATGCTTTGGCAAGAAAGTTCAAGCGAGAGGAGAGTTCTGAAGTTGACCCGAATGACGGCAACGACTCAATTGATGTTGATTCGGTTGCTGACGTGATTGAAGTAAGTGATGGGGATCAGACCTATGCACCTTTCTTCAAAAATGTGCGGGCCCGGCATTGGGAGGAAGTAAAGAAGTTTCTAGGACAACATCCAGAGGCAGCAAGAGTGAGGTTGCCAGCGAGGCGCACGGCTCTTAGCTACGCAGTCTCGATGGAGGACGTGAAACCTCGAGACGTGAAAGGTGTAAAAGAGGAGTTGCTGCCGTTAATGAAAGAGACAGATTTAGAAATACTAGGCGATGCTCTTTCTACGGCTATAAAGAAAGAGAGTGACTCAGATGTGATGATCGAAATTATTAAGGGCATAGTTGAGAAGAACGAGAAACTACTCCTTCGCCATGACCCCACCCATATTTCGTTGGAATTACTACAGAAAAATCCAAGATTGGGCATTGCTAGAGACAGCTCCGGTGAATCCCCTTTATATCAATTGGCTAATACACGTGTTAGATTATTCCGGGATGATTGCCAGCTCGGAATATGGGAACAATGGATTTATAAATGTATATCCATACCACCTACACCTACACCTACCCGTGAGGTTTCTATAGATGTTCATAAAGAAGAGAAAGATCAAGGCAATCAGAAGCATCTCATTCGCAAAGTTGCCTGTTTCTTTCGGGGACTAGTTGCCAAGCTCTGTGACCTTTCTGGAATCAATCGTATGTATCAAATGAAATTGCTCCATCACCGAGCCATCAAAATTCTAGATCGCATGTGTGAACCGTTAAGACAGGACAGAGGTAAAAACAAACTTAGGCAACGAAAGCTTGTCGAAAAAGTACTCTTCAAAGCAGTAGAACGAGGACATGCTCCAATCATCCGTGACATATTGAAATCCGATCCAACGTTCTGTCTGATCACTAATGATCATAACAAGACCATATTTCAACTTGCTGCTGAGCGTCGTCAAGACAATATTTTTAACCTGTTAGATATGTTTCAGCAATGGGATAGAATGGACATTGTAGGCATGAAAGATGAGTTTGGGGACAACATGCTGCATGCGGTGGGAAAGTTCTCCCCATTAACACAAATTGATCATATTCGAGGTCCAGCTTTGCAAATGCAGAAAGAATTACAATGGTTCAAGAAGGTGGAGAGCATGGCAAGACCCAGCGATCTTGATTGTATGAATTCTGATGGTCAGACACCACGTGAGGTATTTACTATATACCACAGAGATTTGGTGGAGGCAGGAGAAAAGTCAATGAAAGAAACTGCAACTTCTTCTTCGACACTAGTAGCTGCTCTTATCATTACCATTATGTTCGCTGCAGCAGTGACAGTTCCTGGTGGAATTCAGGGGGATACAGGTACTCCCATATACTTACACACCAAGGCATTTAGGAGTTTTATGGTTGCAGATGTTACATCTCTCTGCTTTTCCACAACTTCAGTAATGATATTTTTGGGAATCCTCACATCACGTTTTGCAGAAGAAGATTTCCTCATATCCTTGCCCATAAAATTGATAATTGGCTTTCTTACCCTTTTTCTATCCGTCGAGGCCATGATGATTGCCTTTTCTTCCGCCATTTTCATTATGCTCCCGGAAAAACCATCGATTGTTATTCCATCTATTTTACTTACTAGTGTTCCAATTGCCTCATTCCTATGGATGCAATTTCCGTTCCTTCTTGAGATCATTATTTCGACTTATGGATTTAGGGAATTTAGAGTATTTAAAAGGAAACAGGAAATGTTTAAGCTTGATGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

808

Amino Acids

92.22

Weight (kDa)

6.25

Isoelectric Point (pI)

34.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4219 PF13961 20 - 42 4.8e-07 Domain of unknown function (DUF4219)
Retrotran_gag_2 PF14223 29 - 96 1.8e-08 gag-polypeptide of LTR copia-type
DUF4219 PF13961 122 - 148 2.1e-06 Domain of unknown function (DUF4219)
Retrotran_gag_2 PF14223 135 - 212 8.7e-09 gag-polypeptide of LTR copia-type
PGG PF13962 641 - 750 5e-21 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1203
AciI CCGC 4 cut(s) 549, 751, 1712, 2238
AclI AACGTT 1 cut(s) 1553
AclWI GGATC 2 cut(s) 726, 1541
AcsI RAATTY 5 cut(s) 491, 1407, 1840, 2004, 2378
AcuI CTGAAG 4 cut(s) 123, 441, 663, 2085
AcvI CACGTG 2 cut(s) 1148, 1862
AdeI CACNNNGTG 1 cut(s) 1862
AfaI GTAC 2 cut(s) 1488, 2023
AfiI CCNNNNNNNGG 4 cut(s) 659, 762, 763, 1091
AflIII ACRYGT 2 cut(s) 1145, 1147
AhlI ACTAGT 3 cut(s) 1330, 1945, 2297
AjiI CACGTC 3 cut(s) 697, 865, 880
AjnI CCWGG 3 cut(s) 518, 599, 1996
Alw26I GTCTC 5 cut(s) 266, 856, 870, 914, 1098
AlwI GGATC 2 cut(s) 726, 1541
AlwNI CAGNNNCTG 1 cut(s) 1997
Ama87I CYCGRG 1 cut(s) 873
AoxI GGCC 3 cut(s) 522, 753, 2214
ApaI GGGCCC 1 cut(s) 757
ApeKI GCWGC 9 cut(s) 5, 323, 803, 904, 1601, 1705, 1952, 1979, 1982
ApoI RAATTY 5 cut(s) 491, 1407, 1840, 2004, 2378
AspLEI GCGC 1 cut(s) 831
AspS9I GGNCC 4 cut(s) 522, 753, 754, 1757
AsuC2I CCSGG 3 cut(s) 757, 1163, 2258
AsuHPI GGTGA 5 cut(s) 161, 412, 529, 1127, 1385
AvaI CYCGRG 1 cut(s) 873
AvaII GGWCC 1 cut(s) 1757
BaeGI GKGCMC 1 cut(s) 757
BanII GRGCYC 1 cut(s) 757
BbrPI CACGTG 2 cut(s) 1148, 1862
BbsI GAAGAC 2 cut(s) 477, 558
BbvI GCAGC 9 cut(s) 17, 335, 815, 891, 1588, 1692, 1939, 1966, 1994
BccI CCATC 8 cut(s) 247, 707, 850, 1398, 1409, 1841, 2275, 2290
BceAI ACGGC 5 cut(s) 603, 676, 849, 892, 972
BcgI CGANNNNNNTGC 2 cut(s) 1283, 1317
BciT130I CCWGG 3 cut(s) 520, 601, 1998
BciVI GTATCC 1 cut(s) 2008
BclI TGATCA 3 cut(s) 1563, 1573, 1744
BcnI CCSGG 3 cut(s) 757, 1163, 2258
BcoDI GTCTC 5 cut(s) 266, 856, 870, 914, 1098
BcuI ACTAGT 3 cut(s) 1330, 1945, 2297
BfmI CTRYAG 4 cut(s) 9, 1073, 1251, 1980
BfuI GTATCC 1 cut(s) 2008
BglI GCCNNNNNGGC 1 cut(s) 826
BisI GCNGC 9 cut(s) 6, 324, 804, 905, 1602, 1706, 1953, 1980, 1983
BlpI GCTNAGC 1 cut(s) 1605
BlsI GCNGC 9 cut(s) 7, 325, 805, 906, 1603, 1707, 1954, 1981, 1984
BmcAI AGTACT 1 cut(s) 1488
Bme1390I CCNGG 6 cut(s) 520, 601, 757, 1163, 1998, 2258
Bme18I GGWCC 1 cut(s) 1757
BmeT110I CYCGRG 1 cut(s) 873
BmgBI CACGTC 3 cut(s) 697, 865, 880
BmgT120I GGNCC 4 cut(s) 522, 753, 754, 1757
BmiI GGNNCC 1 cut(s) 755
BmrFI CCNGG 6 cut(s) 520, 601, 757, 1163, 1998, 2258
BmrI ACTGGG 1 cut(s) 15
BmsI GCATC 6 cut(s) 253, 547, 586, 934, 1303, 2316
BmuI ACTGGG 1 cut(s) 15
BpiI GAAGAC 2 cut(s) 477, 558
BplI GAGNNNNNCTC 2 cut(s) 962, 994
Bpu1102I GCTNAGC 1 cut(s) 1605
BpuEI CTTGAG 1 cut(s) 2366
BpuMI CCSGG 3 cut(s) 757, 1163, 2258
Bsa29I ATCGAT 1 cut(s) 2270
BsaAI YACGTR 2 cut(s) 1148, 1862
BsaBI GATNNNNATC 1 cut(s) 717
BsaJI CCNNGG 4 cut(s) 129, 186, 519, 2043
BsaWI WCCGGW 1 cut(s) 1112
BsaXI ACNNNNNCTCC 2 cut(s) 2008, 2038
Bsc4I CCNNNNNNNGG 4 cut(s) 659, 762, 763, 1091
Bse1I ACTGG 1 cut(s) 21
Bse3DI GCAATG 3 cut(s) 392, 1095, 1658
Bse8I GATNNNNATC 1 cut(s) 717
BseBI CCWGG 3 cut(s) 520, 601, 1998
BseCI ATCGAT 1 cut(s) 2270
BseDI CCNNGG 4 cut(s) 129, 186, 519, 2043
BseGI GGATG 9 cut(s) 121, 180, 258, 268, 562, 793, 1171, 1524, 2331
BseJI GATNNNNATC 1 cut(s) 717
BseLI CCNNNNNNNGG 4 cut(s) 659, 762, 763, 1091
BseMI GCAATG 3 cut(s) 392, 1095, 1658
BseMII CTCAG 2 cut(s) 993, 1596
BseNI ACTGG 1 cut(s) 21
BseRI GAGGAG 2 cut(s) 647, 911
BseSI GKGCMC 1 cut(s) 757
BseXI GCAGC 9 cut(s) 17, 335, 815, 891, 1588, 1692, 1939, 1966, 1994
BseYI CCCAGC 2 cut(s) 560, 1820
BshFI GGCC 3 cut(s) 524, 755, 2216
BshVI ATCGAT 1 cut(s) 2270
BsiHKCI CYCGRG 1 cut(s) 873
BsiSI CCGG 4 cut(s) 757, 1113, 1162, 2258
BslFI GGGAC 4 cut(s) 2, 446, 1341, 1709
BslI CCNNNNNNNGG 4 cut(s) 659, 762, 763, 1091
BsmAI GTCTC 5 cut(s) 266, 856, 870, 914, 1098
BsmBI CGTCTC 1 cut(s) 870
BsmFI GGGAC 4 cut(s) 2, 446, 1341, 1709
BsmI GAATGC 1 cut(s) 610
BsnI GGCC 3 cut(s) 524, 755, 2216
BsoBI CYCGRG 1 cut(s) 873
Bsp120I GGGCCC 1 cut(s) 753
Bsp1286I GDGCHC 1 cut(s) 757
Bsp1720I GCTNAGC 1 cut(s) 1605
BspACI CCGC 4 cut(s) 549, 751, 1712, 2238
BspANI GGCC 3 cut(s) 524, 755, 2216
BspCNI CTCAG 2 cut(s) 992, 1597
BspDI ATCGAT 1 cut(s) 2270
BspLI GGNNCC 1 cut(s) 755
BspMAI CTGCAG 1 cut(s) 1984
BspPI GGATC 2 cut(s) 726, 1541
BspQI GCTCTTC 1 cut(s) 198
BsrDI GCAATG 3 cut(s) 392, 1095, 1658
BsrI ACTGG 1 cut(s) 21
BssECI CCNNGG 4 cut(s) 129, 186, 519, 2043
BssT1I CCWWGG 2 cut(s) 186, 2043
Bst2UI CCWGG 3 cut(s) 520, 601, 1998
Bst4CI ACNGT 5 cut(s) 13, 133, 288, 1431, 1993
Bst6I CTCTTC 3 cut(s) 198, 1263, 1496
BstAPI GCANNNNNTGC 1 cut(s) 263
BstBAI YACGTR 2 cut(s) 1148, 1862
BstC8I GCNNGC 5 cut(s) 417, 753, 822, 1175, 1710
BstDEI CTNAG 4 cut(s) 839, 979, 1460, 1605
BstDSI CCRYGG 1 cut(s) 129
BstF5I GGATG 9 cut(s) 121, 180, 258, 268, 562, 793, 1171, 1524, 2331
BstHHI GCGC 1 cut(s) 831
BstMAI GTCTC 5 cut(s) 266, 856, 870, 914, 1098
BstMWI GCNNNNNNNGC 7 cut(s) 197, 263, 596, 605, 757, 826, 1471
BstNI CCWGG 3 cut(s) 520, 601, 1998
BstNSI RCATGY 5 cut(s) 533, 1423, 1517, 1705, 1712
BstSCI CCNGG 6 cut(s) 518, 599, 755, 1161, 1996, 2256
BstSFI CTRYAG 4 cut(s) 9, 1073, 1251, 1980
BstSLI GKGCMC 1 cut(s) 757
BstV1I GCAGC 9 cut(s) 17, 335, 815, 891, 1588, 1692, 1939, 1966, 1994
BstV2I GAAGAC 2 cut(s) 477, 558
Bsu15I ATCGAT 1 cut(s) 2270
BsuI GTATCC 1 cut(s) 2008
BsuRI GGCC 3 cut(s) 524, 755, 2216
BsuTUI ATCGAT 1 cut(s) 2270
BtgI CCRYGG 1 cut(s) 129
BtgZI GCGATG 1 cut(s) 957
BtrI CACGTC 3 cut(s) 697, 865, 880
BtsCI GGATG 9 cut(s) 121, 180, 258, 268, 562, 793, 1171, 1524, 2331
BtsI GCAGTG 1 cut(s) 1992
BtsIMutI CAGTG 2 cut(s) 28, 1992
Cac8I GCNNGC 5 cut(s) 417, 753, 822, 1175, 1710
CaiI CAGNNNCTG 1 cut(s) 1997
CfoI GCGC 1 cut(s) 831
Cfr13I GGNCC 4 cut(s) 522, 753, 754, 1757
ClaI ATCGAT 1 cut(s) 2270
CseI GACGC 1 cut(s) 1598
Csp6I GTAC 2 cut(s) 1487, 2022
CviQI GTAC 2 cut(s) 1487, 2022
DdeI CTNAG 4 cut(s) 839, 979, 1460, 1605
DraI TTTAAA 1 cut(s) 2392
DraIII CACNNNGTG 1 cut(s) 1862
Eam1104I CTCTTC 3 cut(s) 198, 1263, 1496
EarI CTCTTC 3 cut(s) 198, 1263, 1496
EciI GGCGGA 1 cut(s) 2227
Eco130I CCWWGG 2 cut(s) 186, 2043
Eco24I GRGCYC 1 cut(s) 757
Eco32I GATATC 1 cut(s) 310
Eco47I GGWCC 1 cut(s) 1757
Eco57I CTGAAG 4 cut(s) 123, 441, 663, 2085
Eco72I CACGTG 2 cut(s) 1148, 1862
Eco88I CYCGRG 1 cut(s) 873
EcoO109I RGGNCCY 1 cut(s) 522
EcoRI GAATTC 3 cut(s) 491, 1840, 2004
EcoRII CCWGG 3 cut(s) 518, 599, 1996
EcoRV GATATC 1 cut(s) 310
EcoT14I CCWWGG 2 cut(s) 186, 2043
EcoT38I GRGCYC 1 cut(s) 757
ErhI CCWWGG 2 cut(s) 186, 2043
Esp3I CGTCTC 1 cut(s) 870
FaqI GGGAC 4 cut(s) 2, 446, 1341, 1709
FauI CCCGC 2 cut(s) 542, 744
FauNDI CATATG 1 cut(s) 162
FbaI TGATCA 3 cut(s) 1563, 1573, 1744
Fnu4HI GCNGC 9 cut(s) 6, 324, 804, 905, 1602, 1706, 1953, 1980, 1983
FokI GGATG 9 cut(s) 128, 187, 265, 275, 569, 780, 1178, 1511, 2338
FriOI GRGCYC 1 cut(s) 757
Fsp4HI GCNGC 9 cut(s) 6, 324, 804, 905, 1602, 1706, 1953, 1980, 1983
GlaI GCGC 1 cut(s) 830
GluI GCNGC 9 cut(s) 6, 324, 804, 905, 1602, 1706, 1953, 1980, 1983
GsaI CCCAGC 2 cut(s) 564, 1824
HaeIII GGCC 3 cut(s) 524, 755, 2216
HapII CCGG 4 cut(s) 757, 1113, 1162, 2258
HgaI GACGC 1 cut(s) 1598
HhaI GCGC 1 cut(s) 831
Hin6I GCGC 1 cut(s) 829
HinP1I GCGC 1 cut(s) 829
HincII GTYRAC 1 cut(s) 649
HindII GTYRAC 1 cut(s) 649
HindIII AAGCTT 2 cut(s) 1472, 2414
HinfI GANTC 6 cut(s) 668, 683, 977, 1118, 1359, 2121
HpaII CCGG 4 cut(s) 757, 1113, 1162, 2258
HphI GGTGA 5 cut(s) 161, 412, 529, 1127, 1385
Hpy166II GTNNAC 2 cut(s) 649, 1427
Hpy8I GTNNAC 2 cut(s) 649, 1427
Hpy99I CGWCG 2 cut(s) 1614, 2213
HpyAV CCTTC 5 cut(s) 98, 473, 1046, 1792, 2351
HpyCH4III ACNGT 5 cut(s) 13, 133, 288, 1431, 1993
HpyCH4IV ACGT 8 cut(s) 435, 696, 864, 879, 1147, 1553, 1861, 2134
HpyF10VI GCNNNNNNNGC 7 cut(s) 197, 263, 596, 605, 757, 826, 1471
HpyF3I CTNAG 4 cut(s) 839, 979, 1460, 1605
HpySE526I ACGT 8 cut(s) 435, 696, 864, 879, 1147, 1553, 1861, 2134
HspAI GCGC 1 cut(s) 829
Ksp22I TGATCA 3 cut(s) 1563, 1573, 1744
LguI GCTCTTC 1 cut(s) 198
LmnI GCTCC 5 cut(s) 390, 1115, 1392, 1522, 2259
Lsp1109I GCAGC 9 cut(s) 17, 335, 815, 891, 1588, 1692, 1939, 1966, 1994
LweI GCATC 6 cut(s) 253, 547, 586, 934, 1303, 2316
MaeII ACGT 8 cut(s) 435, 696, 864, 879, 1147, 1553, 1861, 2134
MaeIII GTNAC 7 cut(s) 242, 575, 974, 1346, 1529, 1987, 2074
MfeI CAATTG 3 cut(s) 672, 1133, 2307
MhlI GDGCHC 1 cut(s) 757
MlyI GAGTC 2 cut(s) 662, 971
MmeI TCCRAC 2 cut(s) 1044, 1574
MslI CAYNNNNRTG 2 cut(s) 251, 2320
MspI CCGG 4 cut(s) 757, 1113, 1162, 2258
MspR9I CCNGG 6 cut(s) 520, 601, 757, 1163, 1998, 2258
MunI CAATTG 3 cut(s) 672, 1133, 2307
Mva1269I GAATGC 1 cut(s) 610
MvaI CCWGG 3 cut(s) 520, 601, 1998
MwoI GCNNNNNNNGC 7 cut(s) 197, 263, 596, 605, 757, 826, 1471
NciI CCSGG 3 cut(s) 757, 1163, 2258
NdeI CATATG 1 cut(s) 162
NlaIV GGNNCC 1 cut(s) 755
NmuCI GTSAC 5 cut(s) 242, 974, 1346, 1529, 1987
NspI RCATGY 5 cut(s) 533, 1423, 1517, 1705, 1712
PaeI GCATGC 1 cut(s) 1712
PaeR7I CTCGAG 1 cut(s) 873
PciSI GCTCTTC 1 cut(s) 198
PctI GAATGC 1 cut(s) 610
PfeI GAWTC 4 cut(s) 683, 1118, 1359, 2121
PflFI GACNNNGTC 1 cut(s) 437
PfoI TCCNGGA 2 cut(s) 1161, 2256
PkrI GCNGC 9 cut(s) 7, 325, 805, 906, 1603, 1707, 1954, 1981, 1984
PleI GAGTC 2 cut(s) 662, 971
PmaCI CACGTG 2 cut(s) 1148, 1862
PmlI CACGTG 2 cut(s) 1148, 1862
PpsI GAGTC 2 cut(s) 662, 971
Ppu21I YACGTR 2 cut(s) 1148, 1862
PsiI TTATAA 1 cut(s) 1203
Psp1406I AACGTT 1 cut(s) 1553
Psp6I CCWGG 3 cut(s) 518, 599, 1996
PspCI CACGTG 2 cut(s) 1148, 1862
PspFI CCCAGC 2 cut(s) 560, 1820
PspGI CCWGG 3 cut(s) 518, 599, 1996
PspN4I GGNNCC 1 cut(s) 755
PspOMI GGGCCC 1 cut(s) 753
PspPI GGNCC 4 cut(s) 522, 753, 754, 1757
PstI CTGCAG 1 cut(s) 1984
PstNI CAGNNNCTG 1 cut(s) 1997
PsyI GACNNNGTC 1 cut(s) 437
RsaI GTAC 2 cut(s) 1488, 2023
RsaNI GTAC 2 cut(s) 1487, 2022
RseI CAYNNNNRTG 2 cut(s) 251, 2320
SapI GCTCTTC 1 cut(s) 198
SatI GCNGC 9 cut(s) 6, 324, 804, 905, 1602, 1706, 1953, 1980, 1983
Sau96I GGNCC 4 cut(s) 522, 753, 754, 1757
ScaI AGTACT 1 cut(s) 1488
SchI GAGTC 2 cut(s) 662, 971
ScrFI CCNGG 6 cut(s) 520, 601, 757, 1163, 1998, 2258
SduI GDGCHC 1 cut(s) 757
SfaNI GCATC 6 cut(s) 253, 547, 586, 934, 1303, 2316
SfcI CTRYAG 4 cut(s) 9, 1073, 1251, 1980
Sfr274I CTCGAG 1 cut(s) 873
SinI GGWCC 1 cut(s) 1757
SlaI CTCGAG 1 cut(s) 873
SmiMI CAYNNNNRTG 2 cut(s) 251, 2320
SmlI CTYRAG 2 cut(s) 873, 2345
SmoI CTYRAG 2 cut(s) 873, 2345
SpeI ACTAGT 3 cut(s) 1330, 1945, 2297
SphI GCATGC 1 cut(s) 1712
SsiI CCGC 4 cut(s) 549, 751, 1712, 2238
SspI AATATT 1 cut(s) 1624
StyD4I CCNGG 6 cut(s) 518, 599, 755, 1161, 1996, 2256
StyI CCWWGG 2 cut(s) 186, 2043
TaaI ACNGT 5 cut(s) 13, 133, 288, 1431, 1993
TaiI ACGT 8 cut(s) 438, 699, 867, 882, 1150, 1556, 1864, 2137
TatI WGTACW 1 cut(s) 1486
TfiI GAWTC 4 cut(s) 683, 1118, 1359, 2121
TscAI CASTG 2 cut(s) 28, 1992
TseFI GTSAC 5 cut(s) 242, 974, 1346, 1529, 1987
TseI GCWGC 9 cut(s) 5, 323, 803, 904, 1601, 1705, 1952, 1979, 1982
Tsp45I GTSAC 5 cut(s) 242, 974, 1346, 1529, 1987
TspGWI ACGGA 4 cut(s) 230, 1517, 2197, 2325
TspRI CASTG 2 cut(s) 28, 1992
Tth111I GACNNNGTC 1 cut(s) 437
VpaK11BI GGWCC 1 cut(s) 1757
XapI RAATTY 5 cut(s) 491, 1407, 1840, 2004, 2378
XbaI TCTAGA 1 cut(s) 1411
XceI RCATGY 5 cut(s) 533, 1423, 1517, 1705, 1712
XhoI CTCGAG 1 cut(s) 873
ZrmI AGTACT 1 cut(s) 1488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.