protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 44 - 155 | 5e-18 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 343 |
| AccI | GTMKAC | 1 cut(s) | 60 |
| AciI | CCGC | 1 cut(s) | 219 |
| AclI | AACGTT | 1 cut(s) | 606 |
| AcsI | RAATTY | 1 cut(s) | 53 |
| AcvI | CACGTG | 1 cut(s) | 83 |
| AcyI | GRCGYC | 1 cut(s) | 340 |
| AfaI | GTAC | 3 cut(s) | 172, 282, 292 |
| AgeI | ACCGGT | 1 cut(s) | 236 |
| AgsI | TTSAA | 1 cut(s) | 271 |
| AjiI | CACGTC | 1 cut(s) | 348 |
| AjnI | CCWGG | 1 cut(s) | 214 |
| AluBI | AGCT | 2 cut(s) | 212, 265 |
| AluI | AGCT | 2 cut(s) | 212, 265 |
| Alw26I | GTCTC | 1 cut(s) | 347 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 215 |
| AoxI | GGCC | 1 cut(s) | 403 |
| ApeKI | GCWGC | 1 cut(s) | 431 |
| ApoI | RAATTY | 1 cut(s) | 53 |
| AsiGI | ACCGGT | 1 cut(s) | 236 |
| AspS9I | GGNCC | 2 cut(s) | 378, 578 |
| AvaII | GGWCC | 2 cut(s) | 378, 578 |
| BbrPI | CACGTG | 1 cut(s) | 83 |
| BbsI | GAAGAC | 1 cut(s) | 233 |
| BbvI | GCAGC | 1 cut(s) | 418 |
| BccI | CCATC | 3 cut(s) | 221, 391, 470 |
| BciT130I | CCWGG | 1 cut(s) | 216 |
| BciVI | GTATCC | 1 cut(s) | 566 |
| BclI | TGATCA | 1 cut(s) | 441 |
| BcoDI | GTCTC | 1 cut(s) | 347 |
| BfaI | CTAG | 1 cut(s) | 39 |
| BfmI | CTRYAG | 1 cut(s) | 165 |
| BfuI | GTATCC | 1 cut(s) | 566 |
| BisI | GCNGC | 1 cut(s) | 432 |
| BlsI | GCNGC | 1 cut(s) | 433 |
| Bme1390I | CCNGG | 1 cut(s) | 216 |
| Bme18I | GGWCC | 2 cut(s) | 378, 578 |
| BmgBI | CACGTC | 1 cut(s) | 348 |
| BmgT120I | GGNCC | 2 cut(s) | 378, 578 |
| BmrFI | CCNGG | 1 cut(s) | 216 |
| BmsI | GCATC | 1 cut(s) | 158 |
| BpiI | GAAGAC | 1 cut(s) | 233 |
| BsaAI | YACGTR | 1 cut(s) | 83 |
| BsaHI | GRCGYC | 1 cut(s) | 340 |
| BsaWI | WCCGGW | 1 cut(s) | 236 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 17, 47 |
| Bse118I | RCCGGY | 1 cut(s) | 236 |
| Bse1I | ACTGG | 1 cut(s) | 500 |
| BseBI | CCWGG | 1 cut(s) | 216 |
| BseGI | GGATG | 1 cut(s) | 124 |
| BseMII | CTCAG | 1 cut(s) | 300 |
| BseNI | ACTGG | 1 cut(s) | 500 |
| BseRI | GAGGAG | 1 cut(s) | 548 |
| BseXI | GCAGC | 1 cut(s) | 418 |
| BshFI | GGCC | 1 cut(s) | 405 |
| BshTI | ACCGGT | 1 cut(s) | 236 |
| BsiSI | CCGG | 1 cut(s) | 237 |
| BslFI | GGGAC | 1 cut(s) | 351 |
| BsmAI | GTCTC | 1 cut(s) | 347 |
| BsmBI | CGTCTC | 1 cut(s) | 347 |
| BsmFI | GGGAC | 1 cut(s) | 351 |
| BsmI | GAATGC | 1 cut(s) | 203 |
| BsnI | GGCC | 1 cut(s) | 405 |
| Bsp143I | GATC | 1 cut(s) | 441 |
| BspACI | CCGC | 1 cut(s) | 219 |
| BspANI | GGCC | 1 cut(s) | 405 |
| BspCNI | CTCAG | 1 cut(s) | 299 |
| BsrFI | RCCGGY | 1 cut(s) | 236 |
| BsrI | ACTGG | 1 cut(s) | 500 |
| BssAI | RCCGGY | 1 cut(s) | 236 |
| BssMI | GATC | 1 cut(s) | 441 |
| BssNI | GRCGYC | 1 cut(s) | 340 |
| Bst2UI | CCWGG | 1 cut(s) | 216 |
| Bst4CI | ACNGT | 4 cut(s) | 90, 166, 295, 520 |
| BstACI | GRCGYC | 1 cut(s) | 340 |
| BstBAI | YACGTR | 1 cut(s) | 83 |
| BstDEI | CTNAG | 1 cut(s) | 286 |
| BstF5I | GGATG | 1 cut(s) | 124 |
| BstKTI | GATC | 1 cut(s) | 444 |
| BstMAI | GTCTC | 1 cut(s) | 347 |
| BstMBI | GATC | 1 cut(s) | 441 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 209, 262 |
| BstNI | CCWGG | 1 cut(s) | 216 |
| BstSCI | CCNGG | 1 cut(s) | 214 |
| BstSFI | CTRYAG | 1 cut(s) | 165 |
| BstV1I | GCAGC | 1 cut(s) | 418 |
| BstV2I | GAAGAC | 1 cut(s) | 233 |
| BsuI | GTATCC | 1 cut(s) | 566 |
| BsuRI | GGCC | 1 cut(s) | 405 |
| BtrI | CACGTC | 1 cut(s) | 348 |
| BtsCI | GGATG | 1 cut(s) | 124 |
| CaiI | CAGNNNCTG | 1 cut(s) | 215 |
| Cfr10I | RCCGGY | 1 cut(s) | 236 |
| Cfr13I | GGNCC | 2 cut(s) | 378, 578 |
| Csp6I | GTAC | 3 cut(s) | 171, 281, 291 |
| CspAI | ACCGGT | 1 cut(s) | 236 |
| CviAII | CATG | 3 cut(s) | 50, 136, 436 |
| CviJI | RGCY | 3 cut(s) | 212, 265, 405 |
| CviKI_1 | RGCY | 3 cut(s) | 212, 265, 405 |
| CviQI | GTAC | 3 cut(s) | 171, 281, 291 |
| DdeI | CTNAG | 1 cut(s) | 286 |
| DpnI | GATC | 1 cut(s) | 443 |
| DpnII | GATC | 1 cut(s) | 441 |
| EciI | GGCGGA | 1 cut(s) | 234 |
| Eco147I | AGGCCT | 1 cut(s) | 405 |
| Eco47I | GGWCC | 2 cut(s) | 378, 578 |
| Eco72I | CACGTG | 1 cut(s) | 83 |
| EcoRII | CCWGG | 1 cut(s) | 214 |
| EcoT22I | ATGCAT | 2 cut(s) | 51, 258 |
| Esp3I | CGTCTC | 1 cut(s) | 347 |
| FaeI | CATG | 3 cut(s) | 53, 139, 439 |
| FaiI | YATR | 9 cut(s) | 32, 51, 137, 188, 254, 258, 357, 437, 470 |
| FaqI | GGGAC | 1 cut(s) | 351 |
| FatI | CATG | 3 cut(s) | 49, 135, 435 |
| FbaI | TGATCA | 1 cut(s) | 441 |
| FblI | GTMKAC | 1 cut(s) | 60 |
| Fnu4HI | GCNGC | 1 cut(s) | 432 |
| FokI | GGATG | 1 cut(s) | 131 |
| Fsp4HI | GCNGC | 1 cut(s) | 432 |
| FspBI | CTAG | 1 cut(s) | 39 |
| GluI | GCNGC | 1 cut(s) | 432 |
| HaeIII | GGCC | 1 cut(s) | 405 |
| HapII | CCGG | 1 cut(s) | 237 |
| Hin1I | GRCGYC | 1 cut(s) | 340 |
| Hin1II | CATG | 3 cut(s) | 53, 139, 439 |
| HincII | GTYRAC | 2 cut(s) | 61, 351 |
| HindII | GTYRAC | 2 cut(s) | 61, 351 |
| HpaII | CCGG | 1 cut(s) | 237 |
| Hpy166II | GTNNAC | 4 cut(s) | 61, 86, 93, 351 |
| Hpy188III | TCNNGA | 1 cut(s) | 271 |
| Hpy8I | GTNNAC | 4 cut(s) | 61, 86, 93, 351 |
| Hpy99I | CGWCG | 1 cut(s) | 530 |
| HpyAV | CCTTC | 1 cut(s) | 591 |
| HpyCH4III | ACNGT | 4 cut(s) | 90, 166, 295, 520 |
| HpyCH4IV | ACGT | 5 cut(s) | 82, 340, 347, 446, 606 |
| HpyCH4V | TGCA | 6 cut(s) | 49, 149, 256, 359, 515, 539 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 209, 262 |
| HpyF3I | CTNAG | 1 cut(s) | 286 |
| HpySE526I | ACGT | 5 cut(s) | 82, 340, 347, 446, 606 |
| Hsp92I | GRCGYC | 1 cut(s) | 340 |
| Hsp92II | CATG | 3 cut(s) | 53, 139, 439 |
| Ksp22I | TGATCA | 1 cut(s) | 441 |
| Kzo9I | GATC | 1 cut(s) | 441 |
| LmnI | GCTCC | 1 cut(s) | 217 |
| LpnPI | CCDG | 5 cut(s) | 201, 228, 250, 273, 513 |
| Lsp1109I | GCAGC | 1 cut(s) | 418 |
| LweI | GCATC | 1 cut(s) | 158 |
| MaeI | CTAG | 1 cut(s) | 39 |
| MaeII | ACGT | 5 cut(s) | 82, 340, 347, 446, 606 |
| MaeIII | GTNAC | 3 cut(s) | 33, 181, 230 |
| MalI | GATC | 1 cut(s) | 443 |
| MboI | GATC | 1 cut(s) | 441 |
| MboII | GAAGA | 6 cut(s) | 144, 147, 233, 309, 374, 444 |
| MluCI | AATT | 4 cut(s) | 13, 53, 324, 495 |
| MnlI | CCTC | 4 cut(s) | 13, 319, 566, 569 |
| Mph1103I | ATGCAT | 2 cut(s) | 51, 258 |
| MseI | TTAA | 1 cut(s) | 494 |
| MslI | CAYNNNNRTG | 1 cut(s) | 392 |
| MspI | CCGG | 1 cut(s) | 237 |
| MspR9I | CCNGG | 1 cut(s) | 216 |
| Mva1269I | GAATGC | 1 cut(s) | 203 |
| MvaI | CCWGG | 1 cut(s) | 216 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 209, 262 |
| NdeII | GATC | 1 cut(s) | 441 |
| NlaIII | CATG | 3 cut(s) | 53, 139, 439 |
| NsiI | ATGCAT | 2 cut(s) | 51, 258 |
| PceI | AGGCCT | 1 cut(s) | 405 |
| PctI | GAATGC | 1 cut(s) | 203 |
| PinAI | ACCGGT | 1 cut(s) | 236 |
| PkrI | GCNGC | 1 cut(s) | 433 |
| PmaCI | CACGTG | 1 cut(s) | 83 |
| PmlI | CACGTG | 1 cut(s) | 83 |
| Ppu21I | YACGTR | 1 cut(s) | 83 |
| Psp1406I | AACGTT | 1 cut(s) | 606 |
| Psp6I | CCWGG | 1 cut(s) | 214 |
| PspCI | CACGTG | 1 cut(s) | 83 |
| PspGI | CCWGG | 1 cut(s) | 214 |
| PspPI | GGNCC | 2 cut(s) | 378, 578 |
| PstNI | CAGNNNCTG | 1 cut(s) | 215 |
| RsaI | GTAC | 3 cut(s) | 172, 282, 292 |
| RsaNI | GTAC | 3 cut(s) | 171, 281, 291 |
| RseI | CAYNNNNRTG | 1 cut(s) | 392 |
| SalI | GTCGAC | 1 cut(s) | 59 |
| SaqAI | TTAA | 1 cut(s) | 494 |
| SatI | GCNGC | 1 cut(s) | 432 |
| Sau3AI | GATC | 1 cut(s) | 441 |
| Sau96I | GGNCC | 2 cut(s) | 378, 578 |
| ScrFI | CCNGG | 1 cut(s) | 216 |
| SfaNI | GCATC | 1 cut(s) | 158 |
| SfcI | CTRYAG | 1 cut(s) | 165 |
| SinI | GGWCC | 2 cut(s) | 378, 578 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 392 |
| Sse9I | AATT | 4 cut(s) | 13, 53, 324, 495 |
| SseBI | AGGCCT | 1 cut(s) | 405 |
| SsiI | CCGC | 1 cut(s) | 219 |
| SspMI | CTAG | 1 cut(s) | 39 |
| StuI | AGGCCT | 1 cut(s) | 405 |
| StyD4I | CCNGG | 1 cut(s) | 214 |
| TaaI | ACNGT | 4 cut(s) | 90, 166, 295, 520 |
| TaiI | ACGT | 5 cut(s) | 85, 343, 350, 449, 609 |
| TaqI | TCGA | 2 cut(s) | 60, 584 |
| TasI | AATT | 4 cut(s) | 13, 53, 324, 495 |
| TatI | WGTACW | 1 cut(s) | 280 |
| Tru1I | TTAA | 1 cut(s) | 494 |
| Tru9I | TTAA | 1 cut(s) | 494 |
| TseI | GCWGC | 1 cut(s) | 431 |
| TspDTI | ATGAA | 3 cut(s) | 66, 135, 152 |
| TspGWI | ACGGA | 1 cut(s) | 591 |
| VpaK11BI | GGWCC | 2 cut(s) | 378, 578 |
| XapI | RAATTY | 1 cut(s) | 53 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 394 |
| XmiI | GTMKAC | 1 cut(s) | 60 |
| XspI | CTAG | 1 cut(s) | 39 |
| ZraI | GACGTC | 1 cut(s) | 341 |
| Zsp2I | ATGCAT | 2 cut(s) | 51, 258 |