protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 179 - 288 | 2.2e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 249 |
| AccII | CGCG | 1 cut(s) | 478 |
| AciI | CCGC | 3 cut(s) | 232, 335, 476 |
| AclWI | GGATC | 1 cut(s) | 4 |
| AcsI | RAATTY | 1 cut(s) | 29 |
| AdeI | CACNNNGTG | 1 cut(s) | 479 |
| AfaI | GTAC | 3 cut(s) | 298, 432, 556 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 334, 913 |
| AgeI | ACCGGT | 1 cut(s) | 433 |
| AgsI | TTSAA | 6 cut(s) | 29, 47, 227, 364, 374, 440 |
| AjiI | CACGTC | 1 cut(s) | 744 |
| AjnI | CCWGG | 2 cut(s) | 610, 991 |
| AluBI | AGCT | 5 cut(s) | 113, 309, 403, 484, 933 |
| AluI | AGCT | 5 cut(s) | 113, 309, 403, 484, 933 |
| Alw21I | GWGCWC | 3 cut(s) | 311, 486, 571 |
| Alw26I | GTCTC | 1 cut(s) | 351 |
| AlwI | GGATC | 1 cut(s) | 4 |
| ApeKI | GCWGC | 1 cut(s) | 403 |
| ApoI | RAATTY | 1 cut(s) | 29 |
| AseI | ATTAAT | 1 cut(s) | 509 |
| AsiGI | ACCGGT | 1 cut(s) | 433 |
| AspS9I | GGNCC | 1 cut(s) | 989 |
| AsuHPI | GGTGA | 2 cut(s) | 850, 884 |
| AsuII | TTCGAA | 1 cut(s) | 901 |
| AvaII | GGWCC | 1 cut(s) | 989 |
| BanII | GRGCYC | 2 cut(s) | 311, 486 |
| BbsI | GAAGAC | 2 cut(s) | 531, 629 |
| Bbv12I | GWGCWC | 3 cut(s) | 311, 486, 571 |
| BbvI | GCAGC | 1 cut(s) | 390 |
| BccI | CCATC | 2 cut(s) | 590, 935 |
| BciT130I | CCWGG | 2 cut(s) | 612, 993 |
| BcoDI | GTCTC | 1 cut(s) | 351 |
| BfmI | CTRYAG | 2 cut(s) | 114, 594 |
| BisI | GCNGC | 2 cut(s) | 232, 404 |
| BlsI | GCNGC | 2 cut(s) | 233, 405 |
| Bme1390I | CCNGG | 2 cut(s) | 612, 993 |
| Bme18I | GGWCC | 1 cut(s) | 989 |
| BmgBI | CACGTC | 1 cut(s) | 744 |
| BmgT120I | GGNCC | 1 cut(s) | 989 |
| BmrFI | CCNGG | 2 cut(s) | 612, 993 |
| BmsI | GCATC | 2 cut(s) | 508, 936 |
| BpiI | GAAGAC | 2 cut(s) | 531, 629 |
| Bpu14I | TTCGAA | 1 cut(s) | 901 |
| BsaBI | GATNNNNATC | 2 cut(s) | 674, 974 |
| BsaWI | WCCGGW | 1 cut(s) | 433 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 334, 913 |
| Bse118I | RCCGGY | 1 cut(s) | 433 |
| Bse1I | ACTGG | 1 cut(s) | 874 |
| Bse3DI | GCAATG | 2 cut(s) | 86, 413 |
| Bse8I | GATNNNNATC | 2 cut(s) | 674, 974 |
| BseBI | CCWGG | 2 cut(s) | 612, 993 |
| BseGI | GGATG | 4 cut(s) | 299, 523, 704, 951 |
| BseJI | GATNNNNATC | 2 cut(s) | 674, 974 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 334, 913 |
| BseMI | GCAATG | 2 cut(s) | 86, 413 |
| BseMII | CTCAG | 1 cut(s) | 729 |
| BseNI | ACTGG | 1 cut(s) | 874 |
| BseXI | GCAGC | 1 cut(s) | 390 |
| Bsh1236I | CGCG | 1 cut(s) | 478 |
| BshTI | ACCGGT | 1 cut(s) | 433 |
| BsiHKAI | GWGCWC | 3 cut(s) | 311, 486, 571 |
| BsiSI | CCGG | 1 cut(s) | 434 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 334, 913 |
| BsmAI | GTCTC | 1 cut(s) | 351 |
| BsmI | GAATGC | 2 cut(s) | 233, 599 |
| Bsp119I | TTCGAA | 1 cut(s) | 901 |
| Bsp1286I | GDGCHC | 3 cut(s) | 311, 486, 571 |
| Bsp1407I | TGTACA | 1 cut(s) | 554 |
| Bsp143I | GATC | 3 cut(s) | 9, 795, 1011 |
| BspACI | CCGC | 3 cut(s) | 232, 335, 476 |
| BspCNI | CTCAG | 1 cut(s) | 728 |
| BspFNI | CGCG | 1 cut(s) | 478 |
| BspHI | TCATGA | 1 cut(s) | 499 |
| BspPI | GGATC | 1 cut(s) | 4 |
| BspQI | GCTCTTC | 1 cut(s) | 69 |
| BspT104I | TTCGAA | 1 cut(s) | 901 |
| BsrDI | GCAATG | 2 cut(s) | 86, 413 |
| BsrFI | RCCGGY | 1 cut(s) | 433 |
| BsrGI | TGTACA | 1 cut(s) | 554 |
| BsrI | ACTGG | 1 cut(s) | 874 |
| BssAI | RCCGGY | 1 cut(s) | 433 |
| BssMI | GATC | 3 cut(s) | 9, 795, 1011 |
| Bst2UI | CCWGG | 2 cut(s) | 612, 993 |
| Bst4CI | ACNGT | 3 cut(s) | 301, 559, 607 |
| Bst6I | CTCTTC | 1 cut(s) | 69 |
| BstAUI | TGTACA | 1 cut(s) | 554 |
| BstBI | TTCGAA | 1 cut(s) | 901 |
| BstC8I | GCNNGC | 2 cut(s) | 915, 1022 |
| BstDEI | CTNAG | 1 cut(s) | 715 |
| BstF5I | GGATG | 4 cut(s) | 299, 523, 704, 951 |
| BstFNI | CGCG | 1 cut(s) | 478 |
| BstKTI | GATC | 3 cut(s) | 12, 798, 1014 |
| BstMAI | GTCTC | 1 cut(s) | 351 |
| BstMBI | GATC | 3 cut(s) | 9, 795, 1011 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 400 |
| BstNI | CCWGG | 2 cut(s) | 612, 993 |
| BstSCI | CCNGG | 2 cut(s) | 610, 991 |
| BstSFI | CTRYAG | 2 cut(s) | 114, 594 |
| BstUI | CGCG | 1 cut(s) | 478 |
| BstV1I | GCAGC | 1 cut(s) | 390 |
| BstV2I | GAAGAC | 2 cut(s) | 531, 629 |
| BtrI | CACGTC | 1 cut(s) | 744 |
| BtsCI | GGATG | 4 cut(s) | 299, 523, 704, 951 |
| BtsIMutI | CAGTG | 2 cut(s) | 141, 603 |
| Cac8I | GCNNGC | 2 cut(s) | 915, 1022 |
| CciI | TCATGA | 1 cut(s) | 499 |
| Cfr10I | RCCGGY | 1 cut(s) | 433 |
| Cfr13I | GGNCC | 1 cut(s) | 989 |
| Csp6I | GTAC | 3 cut(s) | 297, 431, 555 |
| CspAI | ACCGGT | 1 cut(s) | 433 |
| CviAII | CATG | 5 cut(s) | 16, 215, 500, 586, 649 |
| CviJI | RGCY | 6 cut(s) | 113, 309, 403, 484, 917, 933 |
| CviKI_1 | RGCY | 6 cut(s) | 113, 309, 403, 484, 917, 933 |
| CviQI | GTAC | 3 cut(s) | 297, 431, 555 |
| DdeI | CTNAG | 1 cut(s) | 715 |
| DpnI | GATC | 3 cut(s) | 11, 797, 1013 |
| DpnII | GATC | 3 cut(s) | 9, 795, 1011 |
| DraIII | CACNNNGTG | 1 cut(s) | 479 |
| Eam1104I | CTCTTC | 1 cut(s) | 69 |
| EarI | CTCTTC | 1 cut(s) | 69 |
| Ecl136II | GAGCTC | 2 cut(s) | 309, 484 |
| Eco24I | GRGCYC | 2 cut(s) | 311, 486 |
| Eco47I | GGWCC | 1 cut(s) | 989 |
| Eco53kI | GAGCTC | 2 cut(s) | 309, 484 |
| EcoICRI | GAGCTC | 2 cut(s) | 309, 484 |
| EcoRI | GAATTC | 1 cut(s) | 29 |
| EcoRII | CCWGG | 2 cut(s) | 610, 991 |
| EcoT38I | GRGCYC | 2 cut(s) | 311, 486 |
| FaeI | CATG | 5 cut(s) | 19, 218, 503, 589, 652 |
| FatI | CATG | 5 cut(s) | 15, 214, 499, 585, 648 |
| FauI | CCCGC | 1 cut(s) | 328 |
| FauNDI | CATATG | 2 cut(s) | 330, 466 |
| Fnu4HI | GCNGC | 2 cut(s) | 232, 404 |
| FokI | GGATG | 4 cut(s) | 306, 530, 691, 958 |
| FriOI | GRGCYC | 2 cut(s) | 311, 486 |
| Fsp4HI | GCNGC | 2 cut(s) | 232, 404 |
| GluI | GCNGC | 2 cut(s) | 232, 404 |
| HapII | CCGG | 1 cut(s) | 434 |
| Hin1II | CATG | 5 cut(s) | 19, 218, 503, 589, 652 |
| HinfI | GANTC | 3 cut(s) | 449, 527, 735 |
| HpaII | CCGG | 1 cut(s) | 434 |
| HphI | GGTGA | 2 cut(s) | 850, 884 |
| Hpy188I | TCNGA | 1 cut(s) | 685 |
| Hpy188III | TCNNGA | 3 cut(s) | 91, 500, 820 |
| HpyAV | CCTTC | 3 cut(s) | 41, 195, 508 |
| HpyCH4III | ACNGT | 3 cut(s) | 301, 559, 607 |
| HpyCH4IV | ACGT | 3 cut(s) | 37, 743, 748 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 400 |
| HpyF3I | CTNAG | 1 cut(s) | 715 |
| HpySE526I | ACGT | 3 cut(s) | 37, 743, 748 |
| Hsp92II | CATG | 5 cut(s) | 19, 218, 503, 589, 652 |
| Kzo9I | GATC | 3 cut(s) | 9, 795, 1011 |
| LguI | GCTCTTC | 1 cut(s) | 69 |
| LmnI | GCTCC | 1 cut(s) | 330 |
| LpnPI | CCDG | 9 cut(s) | 447, 597, 618, 624, 855, 899, 978, 1005, 1006 |
| Lsp1109I | GCAGC | 1 cut(s) | 390 |
| LweI | GCATC | 2 cut(s) | 508, 936 |
| MaeII | ACGT | 3 cut(s) | 37, 743, 748 |
| MaeIII | GTNAC | 7 cut(s) | 139, 301, 469, 577, 626, 700, 744 |
| MalI | GATC | 3 cut(s) | 11, 797, 1013 |
| MboI | GATC | 3 cut(s) | 9, 795, 1011 |
| MboII | GAAGA | 8 cut(s) | 86, 284, 536, 629, 770, 840, 914, 1021 |
| MhlI | GDGCHC | 3 cut(s) | 311, 486, 571 |
| MluCI | AATT | 9 cut(s) | 5, 29, 237, 286, 341, 359, 506, 531, 720 |
| MlyI | GAGTC | 1 cut(s) | 521 |
| MnlI | CCTC | 6 cut(s) | 116, 724, 749, 779, 827, 866 |
| MseI | TTAA | 5 cut(s) | 240, 414, 509, 534, 666 |
| MslI | CAYNNNNRTG | 1 cut(s) | 863 |
| MspI | CCGG | 1 cut(s) | 434 |
| MspR9I | CCNGG | 2 cut(s) | 612, 993 |
| Mva1269I | GAATGC | 2 cut(s) | 233, 599 |
| MvaI | CCWGG | 2 cut(s) | 612, 993 |
| MvnI | CGCG | 1 cut(s) | 478 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 400 |
| NdeI | CATATG | 2 cut(s) | 330, 466 |
| NdeII | GATC | 3 cut(s) | 9, 795, 1011 |
| NlaIII | CATG | 5 cut(s) | 19, 218, 503, 589, 652 |
| NmuCI | GTSAC | 4 cut(s) | 139, 469, 700, 744 |
| NspV | TTCGAA | 1 cut(s) | 901 |
| PagI | TCATGA | 1 cut(s) | 499 |
| PciSI | GCTCTTC | 1 cut(s) | 69 |
| PctI | GAATGC | 2 cut(s) | 233, 599 |
| PfeI | GAWTC | 2 cut(s) | 449, 735 |
| PinAI | ACCGGT | 1 cut(s) | 433 |
| PkrI | GCNGC | 2 cut(s) | 233, 405 |
| PleI | GAGTC | 1 cut(s) | 521 |
| PpsI | GAGTC | 1 cut(s) | 521 |
| PshBI | ATTAAT | 1 cut(s) | 509 |
| PsiI | TTATAA | 1 cut(s) | 249 |
| Psp124BI | GAGCTC | 2 cut(s) | 311, 486 |
| Psp6I | CCWGG | 2 cut(s) | 610, 991 |
| PspGI | CCWGG | 2 cut(s) | 610, 991 |
| PspPI | GGNCC | 1 cut(s) | 989 |
| RsaI | GTAC | 3 cut(s) | 298, 432, 556 |
| RsaNI | GTAC | 3 cut(s) | 297, 431, 555 |
| RseI | CAYNNNNRTG | 1 cut(s) | 863 |
| SacI | GAGCTC | 2 cut(s) | 311, 486 |
| SapI | GCTCTTC | 1 cut(s) | 69 |
| SaqAI | TTAA | 5 cut(s) | 240, 414, 509, 534, 666 |
| SatI | GCNGC | 2 cut(s) | 232, 404 |
| Sau3AI | GATC | 3 cut(s) | 9, 795, 1011 |
| Sau96I | GGNCC | 1 cut(s) | 989 |
| SchI | GAGTC | 1 cut(s) | 521 |
| ScrFI | CCNGG | 2 cut(s) | 612, 993 |
| SduI | GDGCHC | 3 cut(s) | 311, 486, 571 |
| SfaNI | GCATC | 2 cut(s) | 508, 936 |
| SfcI | CTRYAG | 2 cut(s) | 114, 594 |
| SfuI | TTCGAA | 1 cut(s) | 901 |
| SinI | GGWCC | 1 cut(s) | 989 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 863 |
| Sse9I | AATT | 9 cut(s) | 5, 29, 237, 286, 341, 359, 506, 531, 720 |
| SsiI | CCGC | 3 cut(s) | 232, 335, 476 |
| SspI | AATATT | 1 cut(s) | 999 |
| SstI | GAGCTC | 2 cut(s) | 311, 486 |
| StyD4I | CCNGG | 2 cut(s) | 610, 991 |
| TaaI | ACNGT | 3 cut(s) | 301, 559, 607 |
| TaiI | ACGT | 3 cut(s) | 40, 746, 751 |
| TaqI | TCGA | 4 cut(s) | 109, 163, 821, 901 |
| TaqII | GACCGA | 1 cut(s) | 788 |
| TasI | AATT | 9 cut(s) | 5, 29, 237, 286, 341, 359, 506, 531, 720 |
| TatI | WGTACW | 2 cut(s) | 296, 554 |
| TauI | GCSGC | 1 cut(s) | 234 |
| TfiI | GAWTC | 2 cut(s) | 449, 735 |
| Tru1I | TTAA | 5 cut(s) | 240, 414, 509, 534, 666 |
| Tru9I | TTAA | 5 cut(s) | 240, 414, 509, 534, 666 |
| TscAI | CASTG | 2 cut(s) | 148, 610 |
| TseFI | GTSAC | 4 cut(s) | 139, 469, 700, 744 |
| TseI | GCWGC | 1 cut(s) | 403 |
| Tsp45I | GTSAC | 4 cut(s) | 139, 469, 700, 744 |
| TspDTI | ATGAA | 7 cut(s) | 17, 22, 203, 453, 527, 637, 964 |
| TspRI | CASTG | 2 cut(s) | 148, 610 |
| VpaK11BI | GGWCC | 1 cut(s) | 989 |
| VspI | ATTAAT | 1 cut(s) | 509 |
| XapI | RAATTY | 1 cut(s) | 29 |