protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 180 - 292 | 4.3e-25 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1029 |
| AciI | CCGC | 3 cut(s) | 193, 234, 606 |
| AclWI | GGATC | 1 cut(s) | 34 |
| AcsI | RAATTY | 3 cut(s) | 92, 146, 346 |
| AcuI | CTGAAG | 2 cut(s) | 103, 711 |
| AfaI | GTAC | 4 cut(s) | 325, 441, 568, 893 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1029 |
| AgsI | TTSAA | 4 cut(s) | 146, 227, 380, 720 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 489 |
| AjnI | CCWGG | 2 cut(s) | 622, 1000 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 880, 912 |
| AluBI | AGCT | 1 cut(s) | 125 |
| AluI | AGCT | 1 cut(s) | 125 |
| Alw26I | GTCTC | 2 cut(s) | 53, 272 |
| AlwI | GGATC | 1 cut(s) | 34 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 623 |
| AoxI | GGCC | 2 cut(s) | 811, 998 |
| ApeKI | GCWGC | 2 cut(s) | 167, 608 |
| ApoI | RAATTY | 3 cut(s) | 92, 146, 346 |
| AspS9I | GGNCC | 1 cut(s) | 998 |
| AsuHPI | GGTGA | 1 cut(s) | 211 |
| AxyI | CCTNAGG | 1 cut(s) | 296 |
| BbsI | GAAGAC | 1 cut(s) | 708 |
| BbvI | GCAGC | 2 cut(s) | 179, 620 |
| BciT130I | CCWGG | 2 cut(s) | 624, 1002 |
| BcoDI | GTCTC | 2 cut(s) | 53, 272 |
| BfmI | CTRYAG | 1 cut(s) | 126 |
| BisI | GCNGC | 4 cut(s) | 168, 234, 606, 609 |
| BlsI | GCNGC | 4 cut(s) | 169, 235, 607, 610 |
| Bme1390I | CCNGG | 2 cut(s) | 624, 1002 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 489 |
| BmgT120I | GGNCC | 1 cut(s) | 998 |
| BmrFI | CCNGG | 2 cut(s) | 624, 1002 |
| BmsI | GCATC | 1 cut(s) | 657 |
| BpiI | GAAGAC | 1 cut(s) | 708 |
| BpuEI | CTTGAG | 1 cut(s) | 254 |
| BsaBI | GATNNNNATC | 1 cut(s) | 75 |
| BsaJI | CCNNGG | 1 cut(s) | 1028 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1029 |
| Bse1I | ACTGG | 1 cut(s) | 814 |
| Bse21I | CCTNAGG | 1 cut(s) | 296 |
| Bse3DI | GCAATG | 2 cut(s) | 585, 834 |
| Bse8I | GATNNNNATC | 1 cut(s) | 75 |
| BseBI | CCWGG | 2 cut(s) | 624, 1002 |
| BseDI | CCNNGG | 1 cut(s) | 1028 |
| BseGI | GGATG | 1 cut(s) | 648 |
| BseJI | GATNNNNATC | 1 cut(s) | 75 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1029 |
| BseMI | GCAATG | 2 cut(s) | 585, 834 |
| BseNI | ACTGG | 1 cut(s) | 814 |
| BseRI | GAGGAG | 1 cut(s) | 542 |
| BseXI | GCAGC | 2 cut(s) | 179, 620 |
| BseYI | CCCAGC | 1 cut(s) | 308 |
| BsgI | GTGCAG | 1 cut(s) | 186 |
| BshFI | GGCC | 2 cut(s) | 813, 1000 |
| BslFI | GGGAC | 2 cut(s) | 121, 759 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1029 |
| BsmAI | GTCTC | 2 cut(s) | 53, 272 |
| BsmBI | CGTCTC | 1 cut(s) | 53 |
| BsmFI | GGGAC | 2 cut(s) | 121, 759 |
| BsmI | GAATGC | 1 cut(s) | 611 |
| BsnI | GGCC | 2 cut(s) | 813, 1000 |
| Bsp1407I | TGTACA | 1 cut(s) | 566 |
| Bsp143I | GATC | 2 cut(s) | 39, 597 |
| BspACI | CCGC | 3 cut(s) | 193, 234, 606 |
| BspANI | GGCC | 2 cut(s) | 813, 1000 |
| BspHI | TCATGA | 1 cut(s) | 511 |
| BspPI | GGATC | 1 cut(s) | 34 |
| BsrDI | GCAATG | 2 cut(s) | 585, 834 |
| BsrGI | TGTACA | 1 cut(s) | 566 |
| BsrI | ACTGG | 1 cut(s) | 814 |
| BssECI | CCNNGG | 1 cut(s) | 1028 |
| BssMI | GATC | 2 cut(s) | 39, 597 |
| BssT1I | CCWWGG | 1 cut(s) | 1028 |
| Bst2UI | CCWGG | 2 cut(s) | 624, 1002 |
| Bst4CI | ACNGT | 5 cut(s) | 242, 323, 338, 571, 619 |
| BstAUI | TGTACA | 1 cut(s) | 566 |
| BstDEI | CTNAG | 2 cut(s) | 296, 974 |
| BstF5I | GGATG | 1 cut(s) | 648 |
| BstKTI | GATC | 2 cut(s) | 42, 600 |
| BstMAI | GTCTC | 2 cut(s) | 53, 272 |
| BstMBI | GATC | 2 cut(s) | 39, 597 |
| BstNI | CCWGG | 2 cut(s) | 624, 1002 |
| BstSCI | CCNGG | 2 cut(s) | 622, 1000 |
| BstSFI | CTRYAG | 1 cut(s) | 126 |
| BstV1I | GCAGC | 2 cut(s) | 179, 620 |
| BstV2I | GAAGAC | 1 cut(s) | 708 |
| BstX2I | RGATCY | 1 cut(s) | 39 |
| BstYI | RGATCY | 1 cut(s) | 39 |
| Bsu36I | CCTNAGG | 1 cut(s) | 296 |
| BsuRI | GGCC | 2 cut(s) | 813, 1000 |
| BtsCI | GGATG | 1 cut(s) | 648 |
| BtsIMutI | CAGTG | 3 cut(s) | 343, 549, 735 |
| CaiI | CAGNNNCTG | 1 cut(s) | 623 |
| CciI | TCATGA | 1 cut(s) | 511 |
| Cfr13I | GGNCC | 1 cut(s) | 998 |
| Csp6I | GTAC | 4 cut(s) | 324, 440, 567, 892 |
| CviAII | CATG | 7 cut(s) | 52, 100, 196, 512, 655, 844, 884 |
| CviJI | RGCY | 5 cut(s) | 125, 308, 488, 813, 1000 |
| CviKI_1 | RGCY | 5 cut(s) | 125, 308, 488, 813, 1000 |
| CviQI | GTAC | 4 cut(s) | 324, 440, 567, 892 |
| DdeI | CTNAG | 2 cut(s) | 296, 974 |
| DpnI | GATC | 2 cut(s) | 41, 599 |
| DpnII | GATC | 2 cut(s) | 39, 597 |
| DriI | GACNNNNNGTC | 1 cut(s) | 489 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 489 |
| Eco130I | CCWWGG | 1 cut(s) | 1028 |
| Eco57I | CTGAAG | 2 cut(s) | 103, 711 |
| Eco81I | CCTNAGG | 1 cut(s) | 296 |
| EcoRII | CCWGG | 2 cut(s) | 622, 1000 |
| EcoT14I | CCWWGG | 1 cut(s) | 1028 |
| ErhI | CCWWGG | 1 cut(s) | 1028 |
| Esp3I | CGTCTC | 1 cut(s) | 53 |
| FaeI | CATG | 7 cut(s) | 55, 103, 199, 515, 658, 847, 887 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 880, 912 |
| FaqI | GGGAC | 2 cut(s) | 121, 759 |
| FatI | CATG | 7 cut(s) | 51, 99, 195, 511, 654, 843, 883 |
| Fnu4HI | GCNGC | 4 cut(s) | 168, 234, 606, 609 |
| FokI | GGATG | 1 cut(s) | 635 |
| Fsp4HI | GCNGC | 4 cut(s) | 168, 234, 606, 609 |
| GluI | GCNGC | 4 cut(s) | 168, 234, 606, 609 |
| GsaI | CCCAGC | 1 cut(s) | 312 |
| HaeIII | GGCC | 2 cut(s) | 813, 1000 |
| Hin1II | CATG | 7 cut(s) | 55, 103, 199, 515, 658, 847, 887 |
| HincII | GTYRAC | 1 cut(s) | 494 |
| HindII | GTYRAC | 1 cut(s) | 494 |
| HinfI | GANTC | 3 cut(s) | 291, 508, 747 |
| HphI | GGTGA | 1 cut(s) | 211 |
| Hpy166II | GTNNAC | 1 cut(s) | 494 |
| Hpy188I | TCNGA | 4 cut(s) | 122, 177, 697, 912 |
| Hpy188III | TCNNGA | 4 cut(s) | 248, 271, 446, 512 |
| Hpy8I | GTNNAC | 1 cut(s) | 494 |
| HpyAV | CCTTC | 4 cut(s) | 268, 824, 882, 980 |
| HpyCH4III | ACNGT | 5 cut(s) | 242, 323, 338, 571, 619 |
| HpyCH4IV | ACGT | 2 cut(s) | 46, 760 |
| HpyCH4V | TGCA | 8 cut(s) | 167, 386, 394, 400, 557, 767, 854, 958 |
| HpyF3I | CTNAG | 2 cut(s) | 296, 974 |
| HpySE526I | ACGT | 2 cut(s) | 46, 760 |
| Hsp92II | CATG | 7 cut(s) | 55, 103, 199, 515, 658, 847, 887 |
| Kzo9I | GATC | 2 cut(s) | 39, 597 |
| LmnI | GCTCC | 1 cut(s) | 913 |
| Lsp1109I | GCAGC | 2 cut(s) | 179, 620 |
| LweI | GCATC | 1 cut(s) | 657 |
| MaeII | ACGT | 2 cut(s) | 46, 760 |
| MaeIII | GTNAC | 1 cut(s) | 61 |
| MalI | GATC | 2 cut(s) | 41, 599 |
| MboI | GATC | 2 cut(s) | 39, 597 |
| MboII | GAAGA | 3 cut(s) | 109, 708, 852 |
| MfeI | CAATTG | 2 cut(s) | 365, 936 |
| MflI | RGATCY | 1 cut(s) | 39 |
| MluCI | AATT | 7 cut(s) | 92, 146, 346, 365, 671, 936, 959 |
| MlyI | GAGTC | 2 cut(s) | 517, 741 |
| MnlI | CCTC | 6 cut(s) | 453, 520, 523, 763, 952, 977 |
| MseI | TTAA | 2 cut(s) | 420, 1036 |
| MslI | CAYNNNNRTG | 3 cut(s) | 162, 653, 949 |
| MspR9I | CCNGG | 2 cut(s) | 624, 1002 |
| MunI | CAATTG | 2 cut(s) | 365, 936 |
| Mva1269I | GAATGC | 1 cut(s) | 611 |
| MvaI | CCWGG | 2 cut(s) | 624, 1002 |
| NdeII | GATC | 2 cut(s) | 39, 597 |
| NlaIII | CATG | 7 cut(s) | 55, 103, 199, 515, 658, 847, 887 |
| NmuCI | GTSAC | 1 cut(s) | 61 |
| PagI | TCATGA | 1 cut(s) | 511 |
| PctI | GAATGC | 1 cut(s) | 611 |
| PfeI | GAWTC | 1 cut(s) | 291 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1029 |
| PkrI | GCNGC | 4 cut(s) | 169, 235, 607, 610 |
| PleI | GAGTC | 2 cut(s) | 516, 741 |
| PpsI | GAGTC | 2 cut(s) | 516, 741 |
| Psp6I | CCWGG | 2 cut(s) | 622, 1000 |
| PspFI | CCCAGC | 1 cut(s) | 308 |
| PspGI | CCWGG | 2 cut(s) | 622, 1000 |
| PspPI | GGNCC | 1 cut(s) | 998 |
| PstNI | CAGNNNCTG | 1 cut(s) | 623 |
| PsuI | RGATCY | 1 cut(s) | 39 |
| RsaI | GTAC | 4 cut(s) | 325, 441, 568, 893 |
| RsaNI | GTAC | 4 cut(s) | 324, 440, 567, 892 |
| RseI | CAYNNNNRTG | 3 cut(s) | 162, 653, 949 |
| SaqAI | TTAA | 2 cut(s) | 420, 1036 |
| SatI | GCNGC | 4 cut(s) | 168, 234, 606, 609 |
| Sau3AI | GATC | 2 cut(s) | 39, 597 |
| Sau96I | GGNCC | 1 cut(s) | 998 |
| SchI | GAGTC | 2 cut(s) | 517, 741 |
| ScrFI | CCNGG | 2 cut(s) | 624, 1002 |
| SfaNI | GCATC | 1 cut(s) | 657 |
| SfcI | CTRYAG | 1 cut(s) | 126 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 162, 653, 949 |
| SmlI | CTYRAG | 1 cut(s) | 269 |
| SmoI | CTYRAG | 1 cut(s) | 269 |
| Sse9I | AATT | 7 cut(s) | 92, 146, 346, 365, 671, 936, 959 |
| SsiI | CCGC | 3 cut(s) | 193, 234, 606 |
| SspI | AATATT | 2 cut(s) | 376, 1008 |
| StyD4I | CCNGG | 2 cut(s) | 622, 1000 |
| StyI | CCWWGG | 1 cut(s) | 1028 |
| TaaI | ACNGT | 5 cut(s) | 242, 323, 338, 571, 619 |
| TaiI | ACGT | 2 cut(s) | 49, 763 |
| TasI | AATT | 7 cut(s) | 92, 146, 346, 365, 671, 936, 959 |
| TatI | WGTACW | 1 cut(s) | 566 |
| TauI | GCSGC | 2 cut(s) | 236, 608 |
| TfiI | GAWTC | 1 cut(s) | 291 |
| Tru1I | TTAA | 2 cut(s) | 420, 1036 |
| Tru9I | TTAA | 2 cut(s) | 420, 1036 |
| TscAI | CASTG | 3 cut(s) | 343, 549, 735 |
| TseFI | GTSAC | 1 cut(s) | 61 |
| TseI | GCWGC | 2 cut(s) | 167, 608 |
| Tsp45I | GTSAC | 1 cut(s) | 61 |
| TspDTI | ATGAA | 6 cut(s) | 11, 26, 649, 817, 872, 973 |
| TspGWI | ACGGA | 1 cut(s) | 98 |
| TspRI | CASTG | 3 cut(s) | 343, 549, 735 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1029 |
| XapI | RAATTY | 3 cut(s) | 92, 146, 346 |