Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 888 |
| AccBSI | CCGCTC | 1 cut(s) | 827 |
| AccI | GTMKAC | 1 cut(s) | 933 |
| AccII | CGCG | 1 cut(s) | 850 |
| AcoI | YGGCCR | 1 cut(s) | 206 |
| AcsI | RAATTY | 2 cut(s) | 158, 633 |
| AcuI | CTGAAG | 1 cut(s) | 378 |
| AfaI | GTAC | 2 cut(s) | 489, 858 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 315, 404, 519, 826 |
| AgsI | TTSAA | 6 cut(s) | 163, 184, 230, 473, 877, 1006 |
| AjnI | CCWGG | 1 cut(s) | 614 |
| AluBI | AGCT | 8 cut(s) | 17, 293, 305, 367, 724, 844, 976, 1151 |
| AluI | AGCT | 8 cut(s) | 17, 293, 305, 367, 724, 844, 976, 1151 |
| Alw26I | GTCTC | 2 cut(s) | 605, 685 |
| Ama87I | CYCGRG | 2 cut(s) | 819, 1144 |
| AoxI | GGCC | 5 cut(s) | 206, 617, 625, 966, 1141 |
| ApeKI | GCWGC | 5 cut(s) | 305, 724, 756, 815, 973 |
| ApoI | RAATTY | 2 cut(s) | 158, 633 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 108, 140 |
| AseI | ATTAAT | 1 cut(s) | 504 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 808 |
| AspLEI | GCGC | 1 cut(s) | 941 |
| AspS9I | GGNCC | 2 cut(s) | 626, 1142 |
| AsuC2I | CCSGG | 2 cut(s) | 1145, 1146 |
| AsuHPI | GGTGA | 4 cut(s) | 152, 484, 766, 1049 |
| AvaI | CYCGRG | 2 cut(s) | 819, 1144 |
| BalI | TGGCCA | 1 cut(s) | 208 |
| BauI | CACGAG | 1 cut(s) | 37 |
| BbsI | GAAGAC | 2 cut(s) | 811, 957 |
| BbvI | GCAGC | 5 cut(s) | 292, 711, 768, 827, 985 |
| BccI | CCATC | 4 cut(s) | 549, 617, 801, 1133 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 35 |
| BciT130I | CCWGG | 1 cut(s) | 616 |
| BciVI | GTATCC | 1 cut(s) | 992 |
| BcnI | CCSGG | 2 cut(s) | 1145, 1146 |
| BcoDI | GTCTC | 2 cut(s) | 605, 685 |
| BfaI | CTAG | 3 cut(s) | 242, 302, 384 |
| BfoI | RGCGCY | 1 cut(s) | 942 |
| BfuI | GTATCC | 1 cut(s) | 992 |
| BglII | AGATCT | 3 cut(s) | 78, 271, 598 |
| BisI | GCNGC | 5 cut(s) | 306, 725, 757, 816, 974 |
| BlsI | GCNGC | 5 cut(s) | 307, 726, 758, 817, 975 |
| Bme1390I | CCNGG | 3 cut(s) | 616, 1145, 1146 |
| BmeT110I | CYCGRG | 2 cut(s) | 819, 1144 |
| BmgT120I | GGNCC | 2 cut(s) | 626, 1142 |
| BmrFI | CCNGG | 3 cut(s) | 616, 1145, 1146 |
| BpiI | GAAGAC | 2 cut(s) | 811, 957 |
| BpuMI | CCSGG | 2 cut(s) | 1145, 1146 |
| BsaI | GGTCTC | 1 cut(s) | 605 |
| BsaJI | CCNNGG | 6 cut(s) | 309, 820, 848, 945, 963, 1144 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 713, 743 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 315, 404, 519, 826 |
| Bse118I | RCCGGY | 1 cut(s) | 920 |
| Bse1I | ACTGG | 2 cut(s) | 527, 567 |
| BseBI | CCWGG | 1 cut(s) | 616 |
| BseDI | CCNNGG | 6 cut(s) | 309, 820, 848, 945, 963, 1144 |
| BseGI | GGATG | 1 cut(s) | 1074 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 315, 404, 519, 826 |
| BseMII | CTCAG | 1 cut(s) | 680 |
| BseNI | ACTGG | 2 cut(s) | 527, 567 |
| BseRI | GAGGAG | 5 cut(s) | 713, 734, 837, 851, 854 |
| BseXI | GCAGC | 5 cut(s) | 292, 711, 768, 827, 985 |
| BsgI | GTGCAG | 1 cut(s) | 996 |
| Bsh1236I | CGCG | 1 cut(s) | 850 |
| BshFI | GGCC | 5 cut(s) | 208, 619, 627, 968, 1143 |
| BsiHKCI | CYCGRG | 2 cut(s) | 819, 1144 |
| BsiSI | CCGG | 2 cut(s) | 921, 1145 |
| BslFI | GGGAC | 1 cut(s) | 695 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 315, 404, 519, 826 |
| BsmAI | GTCTC | 2 cut(s) | 605, 685 |
| BsmFI | GGGAC | 1 cut(s) | 695 |
| BsmI | GAATGC | 2 cut(s) | 13, 1046 |
| BsnI | GGCC | 5 cut(s) | 208, 619, 627, 968, 1143 |
| Bso31I | GGTCTC | 1 cut(s) | 605 |
| BsoBI | CYCGRG | 2 cut(s) | 819, 1144 |
| Bsp143I | GATC | 5 cut(s) | 78, 271, 598, 738, 1101 |
| Bsp19I | CCATGG | 1 cut(s) | 945 |
| BspANI | GGCC | 5 cut(s) | 208, 619, 627, 968, 1143 |
| BspCNI | CTCAG | 1 cut(s) | 681 |
| BspFNI | CGCG | 1 cut(s) | 850 |
| BspQI | GCTCTTC | 1 cut(s) | 357 |
| BspTNI | GGTCTC | 1 cut(s) | 605 |
| BsrBI | CCGCTC | 1 cut(s) | 827 |
| BsrFI | RCCGGY | 1 cut(s) | 920 |
| BsrI | ACTGG | 2 cut(s) | 527, 567 |
| BssAI | RCCGGY | 1 cut(s) | 920 |
| BssECI | CCNNGG | 6 cut(s) | 309, 820, 848, 945, 963, 1144 |
| BssMI | GATC | 5 cut(s) | 78, 271, 598, 738, 1101 |
| BssSI | CACGAG | 1 cut(s) | 37 |
| BssT1I | CCWWGG | 3 cut(s) | 309, 945, 963 |
| Bst2BI | CACGAG | 1 cut(s) | 37 |
| Bst2UI | CCWGG | 1 cut(s) | 616 |
| Bst4CI | ACNGT | 3 cut(s) | 331, 345, 931 |
| Bst6I | CTCTTC | 2 cut(s) | 126, 357 |
| BstC8I | GCNNGC | 4 cut(s) | 321, 568, 735, 746 |
| BstDEI | CTNAG | 2 cut(s) | 82, 689 |
| BstDSI | CCRYGG | 2 cut(s) | 848, 945 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 402 |
| BstF5I | GGATG | 1 cut(s) | 1074 |
| BstFNI | CGCG | 1 cut(s) | 850 |
| BstH2I | RGCGCY | 1 cut(s) | 942 |
| BstHHI | GCGC | 1 cut(s) | 941 |
| BstKTI | GATC | 5 cut(s) | 81, 274, 601, 741, 1104 |
| BstMAI | GTCTC | 2 cut(s) | 605, 685 |
| BstMBI | GATC | 5 cut(s) | 78, 271, 598, 738, 1101 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 68, 263, 730, 824 |
| BstNI | CCWGG | 1 cut(s) | 616 |
| BstNSI | RCATGY | 2 cut(s) | 26, 323 |
| BstSCI | CCNGG | 3 cut(s) | 614, 1143, 1144 |
| BstUI | CGCG | 1 cut(s) | 850 |
| BstV1I | GCAGC | 5 cut(s) | 292, 711, 768, 827, 985 |
| BstV2I | GAAGAC | 2 cut(s) | 811, 957 |
| BstX2I | RGATCY | 3 cut(s) | 78, 271, 598 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 454 |
| BstYI | RGATCY | 3 cut(s) | 78, 271, 598 |
| BsuI | GTATCC | 1 cut(s) | 992 |
| BsuRI | GGCC | 5 cut(s) | 208, 619, 627, 968, 1143 |
| BtgI | CCRYGG | 2 cut(s) | 848, 945 |
| BtgZI | GCGATG | 1 cut(s) | 774 |
| BtsCI | GGATG | 1 cut(s) | 1074 |
| BtsI | GCAGTG | 2 cut(s) | 57, 202 |
| BtsIMutI | CAGTG | 2 cut(s) | 57, 202 |
| Cac8I | GCNNGC | 4 cut(s) | 321, 568, 735, 746 |
| CfoI | GCGC | 1 cut(s) | 941 |
| Cfr10I | RCCGGY | 1 cut(s) | 920 |
| Cfr13I | GGNCC | 2 cut(s) | 626, 1142 |
| Cfr42I | CCGCGG | 1 cut(s) | 851 |
| Cfr9I | CCCGGG | 1 cut(s) | 1144 |
| Csp6I | GTAC | 2 cut(s) | 488, 857 |
| CviQI | GTAC | 2 cut(s) | 488, 857 |
| DdeI | CTNAG | 2 cut(s) | 82, 689 |
| DpnI | GATC | 5 cut(s) | 80, 273, 600, 740, 1103 |
| DpnII | GATC | 5 cut(s) | 78, 271, 598, 738, 1101 |
| EaeI | YGGCCR | 1 cut(s) | 206 |
| Eam1104I | CTCTTC | 2 cut(s) | 126, 357 |
| EarI | CTCTTC | 2 cut(s) | 126, 357 |
| EciI | GGCGGA | 1 cut(s) | 447 |
| Eco130I | CCWWGG | 3 cut(s) | 309, 945, 963 |
| Eco147I | AGGCCT | 1 cut(s) | 619 |
| Eco31I | GGTCTC | 1 cut(s) | 605 |
| Eco32I | GATATC | 1 cut(s) | 247 |
| Eco57I | CTGAAG | 1 cut(s) | 378 |
| Eco88I | CYCGRG | 2 cut(s) | 819, 1144 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 402 |
| EcoRI | GAATTC | 1 cut(s) | 158 |
| EcoRII | CCWGG | 1 cut(s) | 614 |
| EcoRV | GATATC | 1 cut(s) | 247 |
| EcoT14I | CCWWGG | 3 cut(s) | 309, 945, 963 |
| ErhI | CCWWGG | 3 cut(s) | 309, 945, 963 |
| FaqI | GGGAC | 1 cut(s) | 695 |
| FauI | CCCGC | 3 cut(s) | 35, 726, 843 |
| FauNDI | CATATG | 1 cut(s) | 657 |
| FblI | GTMKAC | 1 cut(s) | 933 |
| Fnu4HI | GCNGC | 5 cut(s) | 306, 725, 757, 816, 974 |
| FokI | GGATG | 1 cut(s) | 1061 |
| Fsp4HI | GCNGC | 5 cut(s) | 306, 725, 757, 816, 974 |
| FspBI | CTAG | 3 cut(s) | 242, 302, 384 |
| GlaI | GCGC | 1 cut(s) | 940 |
| GluI | GCNGC | 5 cut(s) | 306, 725, 757, 816, 974 |
| HaeII | RGCGCY | 1 cut(s) | 942 |
| HaeIII | GGCC | 5 cut(s) | 208, 619, 627, 968, 1143 |
| HapII | CCGG | 2 cut(s) | 921, 1145 |
| HhaI | GCGC | 1 cut(s) | 941 |
| Hin6I | GCGC | 1 cut(s) | 939 |
| HinP1I | GCGC | 1 cut(s) | 939 |
| HinfI | GANTC | 2 cut(s) | 437, 771 |
| HpaII | CCGG | 2 cut(s) | 921, 1145 |
| HphI | GGTGA | 4 cut(s) | 152, 484, 766, 1049 |
| Hpy166II | GTNNAC | 1 cut(s) | 934 |
| Hpy188III | TCNNGA | 1 cut(s) | 227 |
| Hpy8I | GTNNAC | 1 cut(s) | 934 |
| Hpy99I | CGWCG | 1 cut(s) | 1064 |
| HpyAV | CCTTC | 5 cut(s) | 100, 131, 230, 308, 1127 |
| HpyCH4III | ACNGT | 3 cut(s) | 331, 345, 931 |
| HpyCH4V | TGCA | 7 cut(s) | 22, 71, 96, 323, 416, 677, 1013 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 68, 263, 730, 824 |
| HpyF3I | CTNAG | 2 cut(s) | 82, 689 |
| HspAI | GCGC | 1 cut(s) | 939 |
| KspI | CCGCGG | 1 cut(s) | 851 |
| Kzo9I | GATC | 5 cut(s) | 78, 271, 598, 738, 1101 |
| LguI | GCTCTTC | 1 cut(s) | 357 |
| LmnI | GCTCC | 4 cut(s) | 721, 824, 841, 1148 |
| LpnPI | CCDG | 8 cut(s) | 222, 353, 540, 548, 601, 628, 633, 934 |
| Lsp1109I | GCAGC | 5 cut(s) | 292, 711, 768, 827, 985 |
| MaeI | CTAG | 3 cut(s) | 242, 302, 384 |
| MaeIII | GTNAC | 4 cut(s) | 339, 389, 583, 772 |
| MalI | GATC | 5 cut(s) | 80, 273, 600, 740, 1103 |
| MbiI | CCGCTC | 1 cut(s) | 827 |
| MboI | GATC | 5 cut(s) | 78, 271, 598, 738, 1101 |
| MfeI | CAATTG | 1 cut(s) | 517 |
| MflI | RGATCY | 3 cut(s) | 78, 271, 598 |
| MlsI | TGGCCA | 1 cut(s) | 208 |
| MluCI | AATT | 8 cut(s) | 158, 202, 501, 517, 633, 889, 986, 1030 |
| MluNI | TGGCCA | 1 cut(s) | 208 |
| MlyI | GAGTC | 1 cut(s) | 780 |
| Mox20I | TGGCCA | 1 cut(s) | 208 |
| MroXI | GAANNNNTTC | 1 cut(s) | 808 |
| MscI | TGGCCA | 1 cut(s) | 208 |
| MseI | TTAA | 3 cut(s) | 504, 651, 1029 |
| Msp20I | TGGCCA | 1 cut(s) | 208 |
| MspA1I | CMGCKG | 1 cut(s) | 850 |
| MspI | CCGG | 2 cut(s) | 921, 1145 |
| MspR9I | CCNGG | 3 cut(s) | 616, 1145, 1146 |
| MunI | CAATTG | 1 cut(s) | 517 |
| Mva1269I | GAATGC | 2 cut(s) | 13, 1046 |
| MvaI | CCWGG | 1 cut(s) | 616 |
| MvnI | CGCG | 1 cut(s) | 850 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 68, 263, 730, 824 |
| NciI | CCSGG | 2 cut(s) | 1145, 1146 |
| NcoI | CCATGG | 1 cut(s) | 945 |
| NdeI | CATATG | 1 cut(s) | 657 |
| NdeII | GATC | 5 cut(s) | 78, 271, 598, 738, 1101 |
| NmeAIII | GCCGAG | 1 cut(s) | 994 |
| NmuCI | GTSAC | 2 cut(s) | 583, 772 |
| NspI | RCATGY | 2 cut(s) | 26, 323 |
| PaeI | GCATGC | 1 cut(s) | 323 |
| PceI | AGGCCT | 1 cut(s) | 619 |
| PciSI | GCTCTTC | 1 cut(s) | 357 |
| PctI | GAATGC | 2 cut(s) | 13, 1046 |
| PdmI | GAANNNNTTC | 1 cut(s) | 808 |
| PfeI | GAWTC | 1 cut(s) | 437 |
| PkrI | GCNGC | 5 cut(s) | 307, 726, 758, 817, 975 |
| PleI | GAGTC | 1 cut(s) | 779 |
| PpsI | GAGTC | 1 cut(s) | 779 |
| PshBI | ATTAAT | 1 cut(s) | 504 |
| PsiI | TTATAA | 1 cut(s) | 888 |
| Psp6I | CCWGG | 1 cut(s) | 614 |
| PspGI | CCWGG | 1 cut(s) | 614 |
| PspPI | GGNCC | 2 cut(s) | 626, 1142 |
| PsuI | RGATCY | 3 cut(s) | 78, 271, 598 |
| RsaI | GTAC | 2 cut(s) | 489, 858 |
| RsaNI | GTAC | 2 cut(s) | 488, 857 |
| SacII | CCGCGG | 1 cut(s) | 851 |
| SapI | GCTCTTC | 1 cut(s) | 357 |
| SaqAI | TTAA | 3 cut(s) | 504, 651, 1029 |
| SatI | GCNGC | 5 cut(s) | 306, 725, 757, 816, 974 |
| Sau3AI | GATC | 5 cut(s) | 78, 271, 598, 738, 1101 |
| Sau96I | GGNCC | 2 cut(s) | 626, 1142 |
| SchI | GAGTC | 1 cut(s) | 780 |
| ScrFI | CCNGG | 3 cut(s) | 616, 1145, 1146 |
| Sfr303I | CCGCGG | 1 cut(s) | 851 |
| SgrBI | CCGCGG | 1 cut(s) | 851 |
| SmaI | CCCGGG | 1 cut(s) | 1146 |
| SphI | GCATGC | 1 cut(s) | 323 |
| Sse9I | AATT | 8 cut(s) | 158, 202, 501, 517, 633, 889, 986, 1030 |
| SseBI | AGGCCT | 1 cut(s) | 619 |
| SspI | AATATT | 2 cut(s) | 52, 1084 |
| SspMI | CTAG | 3 cut(s) | 242, 302, 384 |
| StuI | AGGCCT | 1 cut(s) | 619 |
| StyD4I | CCNGG | 3 cut(s) | 614, 1143, 1144 |
| StyI | CCWWGG | 3 cut(s) | 309, 945, 963 |
| TaaI | ACNGT | 3 cut(s) | 331, 345, 931 |
| TasI | AATT | 8 cut(s) | 158, 202, 501, 517, 633, 889, 986, 1030 |
| TatI | WGTACW | 1 cut(s) | 487 |
| TfiI | GAWTC | 1 cut(s) | 437 |
| Tru1I | TTAA | 3 cut(s) | 504, 651, 1029 |
| Tru9I | TTAA | 3 cut(s) | 504, 651, 1029 |
| TscAI | CASTG | 2 cut(s) | 64, 202 |
| TseFI | GTSAC | 2 cut(s) | 583, 772 |
| TseI | GCWGC | 5 cut(s) | 305, 724, 756, 815, 973 |
| Tsp45I | GTSAC | 2 cut(s) | 583, 772 |
| TspDTI | ATGAA | 5 cut(s) | 17, 186, 609, 674, 1063 |
| TspMI | CCCGGG | 1 cut(s) | 1144 |
| TspRI | CASTG | 2 cut(s) | 64, 202 |
| VspI | ATTAAT | 1 cut(s) | 504 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 402 |
| XapI | RAATTY | 2 cut(s) | 158, 633 |
| XceI | RCATGY | 2 cut(s) | 26, 323 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 952 |
| XmaI | CCCGGG | 1 cut(s) | 1144 |
| XmiI | GTMKAC | 1 cut(s) | 933 |
| XmnI | GAANNNNTTC | 1 cut(s) | 808 |
| XspI | CTAG | 3 cut(s) | 242, 302, 384 |