Rw0G020440

Domain of unknown function

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00923
Physical Location & Seq
Reverse (-)
19053 .. 25015
5963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G020440.1

Sequence Viewer

Length: 1863 bp
ATGGTTAAACAAATAACCGTTTTATTTTCAGAAGAGACGCATGAAGCAGTTGACTCGAATGACGAAGTCGTCACAATTAATGATATAGACTTGGAAGTTGCAGGGGTTGGAGAACATAAACGTTTCTTTGCGGAGGTGTTGGCCCGGAATTGGGAAGCTGTAAAGGAGCTTATTGACCAAAATCCAGGGGCAATAAGAGCAAAATTTCAAAACACCGACAAGACAGCTCTTCACTTTGCAGTCCAGTTCAAGGACGTAACCGGTGTAAAAGAATTGCTACCGTTTATGGAAAACAAAGACTTAGAAATGGTAGACCGTGATGGACATACTCCTCTTTCTATGGCTATACTAGAAAAGGATACAGATGTGATGACCGAAATTGCTAAGTGCATGGTTGAGAAGAACAAGAAACTACTCCTTCGTATTGTCGATCCTTCCACCAATACTATTCCACTCCTGATGGCTCTGACGTTGGAAAGACCAAAAATGGCTACTTATATCTATGATACTACTCCACTTGAAAAGCTTAAGAATAGGGATCGAGCCGAGCTACTTTCCACAAGTTTGAGAGTAAAACAGTTAGATAAATCGTGGGACTTAATACAGCGTTTTCCAAGCTTGGCTATTGCTCAAGACCACTCTGGTGAATCCCCTTTGAATGAATTGGCTAGTACGCCTGGATTATTCGTAAATACAAGGCAGCTCAGAATATGGGAACGATGGATTTATTATTGTATATACATACCACCCACGCCCAAACCTACCGATACCCCTGAGGTTTCTATAGAAGTTCAGAAAGAAGAGAAAGATCAAGGCAATCAAAAGCATCTCATTCGCAAAGTTACATGTTTCTCTGGAGGACTAGTTGCCAATCTCCTTCATCTTTCTGGAATTAATCGTATATATCAAATGAAATTGCTCCATGTCAAGACCATCGAAATTCTACGGTGCATGCATCAAGTGTTAGAAAGTGAAGATAATCTCAACTATAGACAACATAAATTGGTCCAAAAAGCATTCTTCCAAGCAGCAGAACGAGGACATGCTCCATTCATCTGTCATTTATTGAGATCTTATCCAAGGTTCCTTGCGATCACTAATGAAAATGACAAGACCGTATTTCAATTTGCTGCTGAGCATCGTCAAGACAAAAATTTTAACCTGATACATGGTTTTGATGAACAAAAGAGAAAAGACATTGTAGGCAGAAAAGATAAGTTTGGGAATAACATGCTACATGTGGTTGGAAAGTTGTCCCCATTAAGGCAGATTACTCATATTCGAGGTGCAGTTTTACAAATGCAGAAAGAACTCCAATGGTTCAAGAAGGTGGAGCGCATGGCAAGTCCTAAGGATCTTAATTGTATAAATTCAGATGGTCGCACACCCCGTGAGGAATTTACTATGAACCACAGGAATTTGGTAGAGGCAGCAGAAAAGTCAATTAAAGAAACTGCAACTTCTTCTTCGGCACTTGTAGCTGCTCTTATCATTACCATTATGTTCGCTACAACAGTTACAACTCCTGGTGGAATTAAGGACATCACAGGTATTCCCATATACTTGGACACCAAGGCATTTCGGCTTTATAATTGCAGATATTTCCTCACATCCTTGCCCACAAAATTGATAATTGGCTTTCTTACCCTGTTCCTATCTATCGGGGCCATGATGATTGCCTTTTCTTCTAGCATTTTCATTATGCTCCATGAACAACAATCTATTGTTAGTCTATCTATTGTACTCGCTATTCTTCCAATTGCCTCATTCCTATGGATGCAATTTCCTTTCCTTCTTGATATCATTATTTCTACTAATGGATTCAAAGTATTTAAAAGGAGAGTAGAAACTCTAAGATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

620

Amino Acids

71.0

Weight (kDa)

8.8

Isoelectric Point (pI)

31.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 51 - 136 2.6e-07 Ankyrin repeats (3 copies)
PGG PF13962 484 - 529 9.7e-06 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1590
AasI GACNNNNNNGTC 1 cut(s) 68
AccI GTMKAC 1 cut(s) 312
AciI CCGC 1 cut(s) 131
AclI AACGTT 1 cut(s) 121
AclWI GGATC 3 cut(s) 425, 546, 1362
AcsI RAATTY 6 cut(s) 203, 939, 1153, 1369, 1397, 1417
AdeI CACNNNGTG 1 cut(s) 1391
AfaI GTAC 2 cut(s) 673, 1743
AfiI CCNNNNNNNGG 4 cut(s) 150, 151, 250, 1263
AflII CTTAAG 1 cut(s) 527
AflIII ACRYGT 2 cut(s) 845, 1237
AgeI ACCGGT 1 cut(s) 260
AgsI TTSAA 7 cut(s) 209, 250, 521, 658, 1124, 1324, 1825
AhlI ACTAGT 1 cut(s) 862
AjnI CCWGG 3 cut(s) 184, 676, 1525
AleI CACNNNNGTG 1 cut(s) 642
AluBI AGCT 8 cut(s) 158, 169, 227, 526, 550, 618, 703, 1481
AluI AGCT 8 cut(s) 158, 169, 227, 526, 550, 618, 703, 1481
Alw26I GTCTC 1 cut(s) 29
AlwI GGATC 3 cut(s) 425, 546, 1362
AoxI GGCC 2 cut(s) 141, 1665
ApeKI GCWGC 5 cut(s) 700, 1028, 1130, 1430, 1481
ApoI RAATTY 6 cut(s) 203, 939, 1153, 1369, 1397, 1417
AseI ATTAAT 2 cut(s) 78, 894
AsiGI ACCGGT 1 cut(s) 260
AspLEI GCGC 1 cut(s) 1338
AspS9I GGNCC 3 cut(s) 142, 1006, 1665
AsuC2I CCSGG 1 cut(s) 145
AsuHPI GGTGA 1 cut(s) 656
AvaII GGWCC 1 cut(s) 1006
AxyI CCTNAGG 2 cut(s) 774, 1350
BaeI ACNNNNGTAYC 2 cut(s) 351, 384
BbvI GCAGC 5 cut(s) 712, 1040, 1117, 1442, 1468
BccI CCATC 5 cut(s) 314, 454, 714, 941, 1370
BcgI CGANNNNNNTGC 4 cut(s) 36, 70, 815, 849
BciT130I CCWGG 3 cut(s) 186, 678, 1527
BciVI GTATCC 1 cut(s) 352
BcnI CCSGG 1 cut(s) 145
BcoDI GTCTC 1 cut(s) 29
BcuI ACTAGT 1 cut(s) 862
BfaI CTAG 4 cut(s) 350, 669, 863, 1689
BfmI CTRYAG 2 cut(s) 783, 988
BfrI CTTAAG 1 cut(s) 527
BfuI GTATCC 1 cut(s) 352
BglII AGATCT 1 cut(s) 1070
BisI GCNGC 5 cut(s) 701, 1029, 1131, 1431, 1482
BlpI GCTNAGC 1 cut(s) 1134
BlsI GCNGC 5 cut(s) 702, 1030, 1132, 1432, 1483
Bme1390I CCNGG 4 cut(s) 145, 186, 678, 1527
Bme18I GGWCC 1 cut(s) 1006
BmgT120I GGNCC 3 cut(s) 142, 1006, 1665
BmiI GGNNCC 2 cut(s) 1085, 1666
BmrFI CCNGG 4 cut(s) 145, 186, 678, 1527
BmsI GCATC 4 cut(s) 835, 964, 1147, 1767
BpmI CTGGAG 1 cut(s) 876
Bpu1102I GCTNAGC 1 cut(s) 1134
BpuEI CTTGAG 1 cut(s) 615
BpuMI CCSGG 1 cut(s) 145
BsaJI CCNNGG 3 cut(s) 185, 1079, 1572
BsaWI WCCGGW 1 cut(s) 260
BsaXI ACNNNNNCTCC 2 cut(s) 849, 879
Bsc4I CCNNNNNNNGG 4 cut(s) 150, 151, 250, 1263
Bse118I RCCGGY 1 cut(s) 260
Bse1I ACTGG 1 cut(s) 244
Bse21I CCTNAGG 2 cut(s) 774, 1350
BseBI CCWGG 3 cut(s) 186, 678, 1527
BseDI CCNNGG 3 cut(s) 185, 1079, 1572
BseGI GGATG 2 cut(s) 1610, 1782
BseLI CCNNNNNNNGG 4 cut(s) 150, 151, 250, 1263
BseMII CTCAG 3 cut(s) 718, 765, 1125
BseNI ACTGG 1 cut(s) 244
BseRI GAGGAG 1 cut(s) 321
BseXI GCAGC 5 cut(s) 712, 1040, 1117, 1442, 1468
BsgI GTGCAG 1 cut(s) 1308
BshFI GGCC 2 cut(s) 143, 1667
BshTI ACCGGT 1 cut(s) 260
BsiSI CCGG 2 cut(s) 145, 261
BslFI GGGAC 2 cut(s) 608, 1240
BslI CCNNNNNNNGG 4 cut(s) 150, 151, 250, 1263
BsmAI GTCTC 1 cut(s) 29
BsmBI CGTCTC 1 cut(s) 29
BsmFI GGGAC 2 cut(s) 608, 1240
BsmI GAATGC 1 cut(s) 1016
BsnI GGCC 2 cut(s) 143, 1667
Bsp143I GATC 6 cut(s) 430, 538, 808, 1070, 1092, 1354
Bsp1720I GCTNAGC 1 cut(s) 1134
BspACI CCGC 1 cut(s) 131
BspANI GGCC 2 cut(s) 143, 1667
BspCNI CTCAG 3 cut(s) 717, 766, 1126
BspLI GGNNCC 2 cut(s) 1085, 1666
BspPI GGATC 3 cut(s) 425, 546, 1362
BspQI GCTCTTC 1 cut(s) 234
BspTI CTTAAG 1 cut(s) 527
BsrFI RCCGGY 1 cut(s) 260
BsrI ACTGG 1 cut(s) 244
BssAI RCCGGY 1 cut(s) 260
BssECI CCNNGG 3 cut(s) 185, 1079, 1572
BssMI GATC 6 cut(s) 430, 538, 808, 1070, 1092, 1354
BssT1I CCWWGG 2 cut(s) 1079, 1572
Bst2UI CCWGG 3 cut(s) 186, 678, 1527
Bst4CI ACNGT 7 cut(s) 19, 282, 317, 579, 948, 1117, 1516
Bst6I CTCTTC 3 cut(s) 27, 234, 795
BstAFI CTTAAG 1 cut(s) 527
BstC8I GCNNGC 1 cut(s) 953
BstDEI CTNAG 7 cut(s) 301, 384, 704, 774, 1134, 1350, 1853
BstF5I GGATG 2 cut(s) 1610, 1782
BstHHI GCGC 1 cut(s) 1338
BstKTI GATC 6 cut(s) 433, 541, 811, 1073, 1095, 1357
BstMAI GTCTC 1 cut(s) 29
BstMBI GATC 6 cut(s) 430, 538, 808, 1070, 1092, 1354
BstMWI GCNNNNNNNGC 2 cut(s) 197, 1478
BstNI CCWGG 3 cut(s) 186, 678, 1527
BstNSI RCATGY 5 cut(s) 849, 955, 1046, 1234, 1241
BstSCI CCNGG 4 cut(s) 143, 184, 676, 1525
BstSFI CTRYAG 2 cut(s) 783, 988
BstV1I GCAGC 5 cut(s) 712, 1040, 1117, 1442, 1468
BstX2I RGATCY 2 cut(s) 1070, 1354
BstXI CCANNNNNNTGG 1 cut(s) 1564
BstYI RGATCY 2 cut(s) 1070, 1354
Bsu36I CCTNAGG 2 cut(s) 774, 1350
BsuI GTATCC 1 cut(s) 352
BsuRI GGCC 2 cut(s) 143, 1667
BtsCI GGATG 2 cut(s) 1610, 1782
Cac8I GCNNGC 1 cut(s) 953
CfoI GCGC 1 cut(s) 1338
Cfr10I RCCGGY 1 cut(s) 260
Cfr13I GGNCC 3 cut(s) 142, 1006, 1665
CseI GACGC 1 cut(s) 46
Csp6I GTAC 2 cut(s) 672, 1742
CspAI ACCGGT 1 cut(s) 260
CviQI GTAC 2 cut(s) 672, 1742
DdeI CTNAG 7 cut(s) 301, 384, 704, 774, 1134, 1350, 1853
DpnI GATC 6 cut(s) 432, 540, 810, 1072, 1094, 1356
DpnII GATC 6 cut(s) 430, 538, 808, 1070, 1092, 1354
DraI TTTAAA 1 cut(s) 1834
DraIII CACNNNGTG 1 cut(s) 1391
DrdI GACNNNNNNGTC 1 cut(s) 68
DseDI GACNNNNNNGTC 1 cut(s) 68
Eam1104I CTCTTC 3 cut(s) 27, 234, 795
EarI CTCTTC 3 cut(s) 27, 234, 795
Eco130I CCWWGG 2 cut(s) 1079, 1572
Eco32I GATATC 1 cut(s) 1801
Eco47I GGWCC 1 cut(s) 1006
Eco81I CCTNAGG 2 cut(s) 774, 1350
EcoRII CCWGG 3 cut(s) 184, 676, 1525
EcoRV GATATC 1 cut(s) 1801
EcoT14I CCWWGG 2 cut(s) 1079, 1572
EcoT22I ATGCAT 1 cut(s) 957
ErhI CCWWGG 2 cut(s) 1079, 1572
Esp3I CGTCTC 1 cut(s) 29
FaqI GGGAC 2 cut(s) 608, 1240
FblI GTMKAC 1 cut(s) 312
Fnu4HI GCNGC 5 cut(s) 701, 1029, 1131, 1431, 1482
FokI GGATG 2 cut(s) 1597, 1789
Fsp4HI GCNGC 5 cut(s) 701, 1029, 1131, 1431, 1482
FspBI CTAG 4 cut(s) 350, 669, 863, 1689
GlaI GCGC 1 cut(s) 1337
GluI GCNGC 5 cut(s) 701, 1029, 1131, 1431, 1482
GsuI CTGGAG 1 cut(s) 876
HaeIII GGCC 2 cut(s) 143, 1667
HapII CCGG 2 cut(s) 145, 261
HgaI GACGC 1 cut(s) 46
HhaI GCGC 1 cut(s) 1338
Hin6I GCGC 1 cut(s) 1336
HinP1I GCGC 1 cut(s) 1336
HincII GTYRAC 1 cut(s) 52
HindII GTYRAC 1 cut(s) 52
HindIII AAGCTT 2 cut(s) 524, 616
HinfI GANTC 4 cut(s) 53, 647, 1821, 1857
HpaII CCGG 2 cut(s) 145, 261
HphI GGTGA 1 cut(s) 656
Hpy166II GTNNAC 2 cut(s) 52, 313
Hpy188I TCNGA 5 cut(s) 31, 468, 707, 795, 1375
Hpy188III TCNNGA 8 cut(s) 457, 632, 855, 888, 928, 1145, 1324, 1796
Hpy8I GTNNAC 2 cut(s) 52, 313
HpyAV CCTTC 5 cut(s) 428, 444, 887, 1321, 1802
HpyCH4III ACNGT 7 cut(s) 19, 282, 317, 579, 948, 1117, 1516
HpyCH4IV ACGT 3 cut(s) 121, 255, 470
HpyF10VI GCNNNNNNNGC 2 cut(s) 197, 1478
HpyF3I CTNAG 7 cut(s) 301, 384, 704, 774, 1134, 1350, 1853
HpySE526I ACGT 3 cut(s) 121, 255, 470
HspAI GCGC 1 cut(s) 1336
Kzo9I GATC 6 cut(s) 430, 538, 808, 1070, 1092, 1354
LguI GCTCTTC 1 cut(s) 234
LmnI GCTCC 5 cut(s) 166, 924, 1051, 1333, 1710
Lsp1109I GCAGC 5 cut(s) 712, 1040, 1117, 1442, 1468
LweI GCATC 4 cut(s) 835, 964, 1147, 1767
MaeI CTAG 4 cut(s) 350, 669, 863, 1689
MaeII ACGT 3 cut(s) 121, 255, 470
MaeIII GTNAC 4 cut(s) 70, 256, 841, 1516
MalI GATC 6 cut(s) 432, 540, 810, 1072, 1094, 1356
MboI GATC 6 cut(s) 430, 538, 808, 1070, 1092, 1354
MfeI CAATTG 1 cut(s) 1758
MflI RGATCY 2 cut(s) 1070, 1354
MlyI GAGTC 1 cut(s) 47
MmeI TCCRAC 3 cut(s) 88, 453, 1225
Mph1103I ATGCAT 1 cut(s) 957
MslI CAYNNNNRTG 2 cut(s) 642, 1771
MspCI CTTAAG 1 cut(s) 527
MspI CCGG 2 cut(s) 145, 261
MspR9I CCNGG 4 cut(s) 145, 186, 678, 1527
MunI CAATTG 1 cut(s) 1758
Mva1269I GAATGC 1 cut(s) 1016
MvaI CCWGG 3 cut(s) 186, 678, 1527
MwoI GCNNNNNNNGC 2 cut(s) 197, 1478
NciI CCSGG 1 cut(s) 145
NdeII GATC 6 cut(s) 430, 538, 808, 1070, 1092, 1354
NlaIV GGNNCC 2 cut(s) 1085, 1666
NmeAIII GCCGAG 1 cut(s) 571
NmuCI GTSAC 1 cut(s) 70
NsiI ATGCAT 1 cut(s) 957
NspI RCATGY 5 cut(s) 849, 955, 1046, 1234, 1241
OliI CACNNNNGTG 1 cut(s) 642
PaeI GCATGC 1 cut(s) 955
PciI ACATGT 2 cut(s) 845, 1237
PciSI GCTCTTC 1 cut(s) 234
PcsI WCGNNNNNNNCGW 1 cut(s) 1387
PctI GAATGC 1 cut(s) 1016
PfeI GAWTC 3 cut(s) 647, 1821, 1857
PflFI GACNNNGTC 1 cut(s) 65
PinAI ACCGGT 1 cut(s) 260
PkrI GCNGC 5 cut(s) 702, 1030, 1132, 1432, 1483
PleI GAGTC 1 cut(s) 47
PpsI GAGTC 1 cut(s) 47
PscI ACATGT 2 cut(s) 845, 1237
PshBI ATTAAT 2 cut(s) 78, 894
PsiI TTATAA 1 cut(s) 1590
Psp1406I AACGTT 1 cut(s) 121
Psp6I CCWGG 3 cut(s) 184, 676, 1525
PspGI CCWGG 3 cut(s) 184, 676, 1525
PspN4I GGNNCC 2 cut(s) 1085, 1666
PspPI GGNCC 3 cut(s) 142, 1006, 1665
PsuI RGATCY 2 cut(s) 1070, 1354
PsyI GACNNNGTC 1 cut(s) 65
RsaI GTAC 2 cut(s) 673, 1743
RsaNI GTAC 2 cut(s) 672, 1742
RseI CAYNNNNRTG 2 cut(s) 642, 1771
SapI GCTCTTC 1 cut(s) 234
SatI GCNGC 5 cut(s) 701, 1029, 1131, 1431, 1482
Sau3AI GATC 6 cut(s) 430, 538, 808, 1070, 1092, 1354
Sau96I GGNCC 3 cut(s) 142, 1006, 1665
SchI GAGTC 1 cut(s) 47
ScrFI CCNGG 4 cut(s) 145, 186, 678, 1527
SfaNI GCATC 4 cut(s) 835, 964, 1147, 1767
SfcI CTRYAG 2 cut(s) 783, 988
SinI GGWCC 1 cut(s) 1006
SmiMI CAYNNNNRTG 2 cut(s) 642, 1771
SmlI CTYRAG 2 cut(s) 527, 630
SmoI CTYRAG 2 cut(s) 527, 630
SpeI ACTAGT 1 cut(s) 862
SphI GCATGC 1 cut(s) 955
SsiI CCGC 1 cut(s) 131
SspMI CTAG 4 cut(s) 350, 669, 863, 1689
StyD4I CCNGG 4 cut(s) 143, 184, 676, 1525
StyI CCWWGG 2 cut(s) 1079, 1572
TaaI ACNGT 7 cut(s) 19, 282, 317, 579, 948, 1117, 1516
TaiI ACGT 3 cut(s) 124, 258, 473
TaqI TCGA 5 cut(s) 56, 429, 541, 936, 1282
TaqII GACCGA 1 cut(s) 389
TatI WGTACW 1 cut(s) 1741
TfiI GAWTC 3 cut(s) 647, 1821, 1857
TseFI GTSAC 1 cut(s) 70
TseI GCWGC 5 cut(s) 700, 1028, 1130, 1430, 1481
Tsp45I GTSAC 1 cut(s) 70
Tth111I GACNNNGTC 1 cut(s) 65
Vha464I CTTAAG 1 cut(s) 527
VpaK11BI GGWCC 1 cut(s) 1006
VspI ATTAAT 2 cut(s) 78, 894
XapI RAATTY 6 cut(s) 203, 939, 1153, 1369, 1397, 1417
XceI RCATGY 5 cut(s) 849, 955, 1046, 1234, 1241
XmiI GTMKAC 1 cut(s) 312
XspI CTAG 4 cut(s) 350, 669, 863, 1689
Zsp2I ATGCAT 1 cut(s) 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.